HHsearch alignment of GI: 254780237 and MMDB domain: 3h0g_K_

>3h0g_K (K:) DNA-directed RNA polymerase II subunit RPB11; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=94.22  E-value=0.077  Score=31.73  Aligned_cols=48  Identities=13%  Similarity=0.093  Sum_probs=39.5

Q ss_pred             EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             442235776411688776218999999389617779999999999998887622
Q gi|254780237|r  180 IKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN  233 (340)
Q Consensus       180 V~~Vny~Ve~~rvg~~t~~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~  233 (340)
                      |.-+.|.|..      ....+..|-|.|+|+++|.+||..|++-|.+.+..|.+
T Consensus        55 V~fagY~ipH------Pl~~~~~lrIqT~~~~~p~~al~~A~~~l~~~~~~l~~  102 (123)
T 3h0g_K           55 VLFAGYKVPH------PLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKV  102 (123)
T ss_dssp             CSCBCCBCSC------TTSCEEEEEEECCSSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCC------CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2498876789------98782079999699999999999999999999999999