HHSEARCH alignment of GI: 254780237 and SCOP domain: d1b22a_

Alignment

Probab=96.95  E-value=0.00046  Score=43.58  Aligned_cols=56  Identities=5%  Similarity=0.145  Sum_probs=50.4

Q ss_pred             CCHHHC---CCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             112210---11058889898839837188874498888618898864499999999980
Q gi|254780237|r  258 KKVEEL---ELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGTM  313 (340)
Q Consensus       258 ~~IeeL---eLSvRs~NcLk~a~I~tigdLv~~s~~dLl~ikNfG~KSl~EI~~~L~~~  313 (340)
                      .+|+.|   .++....+-|+.||++||.+++..+.+||+++++|+.++.+-|.+.-..+
T Consensus         8 ~~i~~L~~~Gig~~~i~kL~~aG~~Tv~~i~~at~~~L~~i~G~~e~~A~KIi~~a~k~   66 (70)
T d1b22a_           8 QPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKL   66 (70)
T ss_dssp             CCHHHHHHTTCSHHHHHHHHTTCCSSGGGBTSSBHHHHHTTTTCSTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             11999860899999999999968634999984899999876797899999999999987

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]