HHSEARCH alignment of GI: 254780237 and SCOP domain: d1szpa1

Alignment

Probab=97.26  E-value=0.00031  Score=44.72  Aligned_cols=56  Identities=11%  Similarity=0.202  Sum_probs=50.8

Q ss_pred             CCHHHCC---CCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             1122101---1058889898839837188874498888618898864499999999980
Q gi|254780237|r  258 KKVEELE---LSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGTM  313 (340)
Q Consensus       258 ~~IeeLe---LSvRs~NcLk~a~I~tigdLv~~s~~dLl~ikNfG~KSl~EI~~~L~~~  313 (340)
                      .||+.|+   ++....+-|+.||++||.+|...+.+||.++++||.+..+-|.+.-.++
T Consensus         1 ~pi~~L~~~Gig~~~~~kL~~aG~~Tve~ia~~t~~~L~~i~Gi~e~~a~KIi~~A~k~   59 (64)
T d1szpa1           1 VPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARL   59 (64)
T ss_dssp             CCGGGGCCTTCCHHHHHHHHTTSCCSHHHHHHSCSHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             97799757799999999999969974999986899999776797899999999999987

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]