Probab=97.96 E-value=1.6e-05 Score=53.01 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=72.3 Q ss_pred CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC Q ss_conf 36788815899996169756678889999987416983068899988714431466462444999998401141777279 Q gi|254780237|r 20 LGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGD 99 (340) Q Consensus 20 ~~~~~~~~g~f~~~Ple~G~g~TlGNaLRRvLLssi~G~ait~vkI~gv~HEfs~i~GV~EDV~eIiLNLK~I~~k~~~~ 99 (340) +-+.+++.-+|.+. |--..++|||||+||+.+|-+++.-+-..... +. T Consensus 8 i~~~~~~~~~F~l~----~~d~s~ANalRRi~iaeV~t~v~feyDp~N~l--------------------rH-------- 55 (135) T d1twfc1 8 IREASKDNVDFILS----NVDLAMANSLRRVMIAEIAAAIEFEYDPWNKL--------------------KH-------- 55 (135) T ss_dssp CSCCCSSEECCEEB----SSCHHHHHHHHHHHHHCCEEEEEEEECSSTTS--------------------CC-------- T ss_pred EEECCCCEEEEEEE----CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCC--------------------CC-------- T ss_conf 99747977999994----78889999999999985023313663354552--------------------44-------- Q ss_pred CCEEEEEEEECCEEEEEEEEECCCCEEEECCCEEEEEECCCCEEEEEEEEECCCCCEECCCCCCCCCCCCEECCCCCHHE Q ss_conf 82799999944716996335138985998888089997789649999997468763203444465575430212431111 Q gi|254780237|r 100 SHKRVTIFKRGPGVVTAGDIQTVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSP 179 (340) Q Consensus 100 ~~~~~~l~~~Gp~~vtA~Di~~p~~veivNpd~~IaTl~~~~~l~iel~ie~G~GY~~~e~~~~~~~~ig~i~iDa~FsP 179 (340) .-|...+. ..+. +|. +-++| T Consensus 56 -----------------------------------------------------tdyw~e~~-~~~e-----wP~-s~~~~ 75 (135) T d1twfc1 56 -----------------------------------------------------TDYWYEQD-SAKE-----WPQ-SKNCE 75 (135) T ss_dssp -----------------------------------------------------SCCCCSSC-HHHH-----SCC-CGGGT T ss_pred -----------------------------------------------------EEECCCCC-CCCC-----CCC-CCCCC T ss_conf -----------------------------------------------------13214678-5011-----786-55777 Q ss_pred EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC Q ss_conf 442235776411688776218999999389617779999999999998887622 Q gi|254780237|r 180 IKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN 233 (340) Q Consensus 180 V~~Vny~Ve~~rvg~~t~~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~ 233 (340) ...-...-+...... .-++-+|.|+|-|++.|.+-+.+|.++|+.-+.-|.. T Consensus 76 ~e~~~~e~e~fd~~a--kpd~F~f~VEs~G~l~p~~Iv~~ai~iL~~Kl~~l~~ 127 (135) T d1twfc1 76 YEDPPNEGDPFDYKA--QADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILL 127 (135) T ss_dssp TSCCCCSSSCCCTTC--CCCCEEEEEEECSSSCHHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCC--CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 778754345778778--9877999987046789899999999999999999999
class: Alpha and beta proteins (a+b)
fold: DCoH-like
superfamily: RBP11-like subunits of RNA polymerase
family: RNA polymerase alpha subunit dimerisation domain
domain: RPB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]