PSIBLAST alignment of GI: 254780237 and protein with PDB id: 1lb2

>gi|24158833|pdb|1LB2|B Chain B, Structure Of The E. Coli Alpha C-Terminal Domain Of Rna Polymerase In Complex With Cap And Dna Length = 84
>gi|24158834|pdb|1LB2|E Chain E, Structure Of The E. Coli Alpha C-Terminal Domain Of Rna Polymerase In Complex With Cap And Dna Length = 84
 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/82 (56%), Positives = 61/82 (74%)

Query: 250 LPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGV 309
             F+P LL+ V++LEL+VRS NCL+ E I Y+GDL+QRTE ++L+  N G+KSL EIK V
Sbjct: 2   PEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDV 61

Query: 310 LGTMGLFLGMNLPDWPPESIEE 331
           L + GL LGM L +WPP SI +
Sbjct: 62  LASRGLSLGMRLENWPPASIAD 83