RPSBLAST alignment for GI: 254780237 and conserved domain: PRK05182

>gnl|CDD|179956 PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional. Length = 310

 Score =  446 bits (1150), Expect = e-126
 Identities = 169/313 (53%), Positives = 232/313 (74%), Gaps = 3/313 (0%)

Query: 7   QELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQID 66
            E +KP  IE +    E++N    + EPL RGF  TLGNALRRVL+SSL GAA+T+V+ID
Sbjct: 1   TEFLKPQKIE-VEEESEDDNYGKFVLEPLERGFGTTLGNALRRVLLSSLPGAAVTSVKID 59

Query: 67  GVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIE 126
           GVLHE S+I GV ED+T+IILN+KG+ LK+ GD    +T+ K+GPG VTAGDI+T  D+E
Sbjct: 60  GVLHEFSTIPGVREDVTEIILNLKGLRLKLHGDEPVTLTLSKKGPGEVTAGDIETDGDVE 119

Query: 127 VLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYT 186
           ++NPD VI  L+  A + MELTV +G GYVPA+ ++ E+ PIG I +DA++SP+KKV+YT
Sbjct: 120 IVNPDLVIATLNEGAKLEMELTVERGRGYVPAEENK-EDAPIGRIPVDAIFSPVKKVNYT 178

Query: 187 VESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKEVKEDIN 246
           VE+ R GQ  DYDKL + ++TDGSIT E+++ALA++IL +QL +F++ EE  +E +E++ 
Sbjct: 179 VENTRVGQRTDYDKLILEVETDGSITPEEALALAAKILVEQLSVFVDLEEA-EEAEEEVE 237

Query: 247 VKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEI 306
            +   F+P LL+ +EELELSVRS NCL+   I  +GDL+QRTE ++L+  N G+KSL EI
Sbjct: 238 EEEPEFDPILLRPIEELELSVRSYNCLKRAGINTIGDLVQRTEEELLKTRNLGKKSLEEI 297

Query: 307 KGVLGTMGLFLGM 319
           K  L  +GL LGM
Sbjct: 298 KEKLAELGLSLGM 310