RPSBLAST alignment for GI: 254780237 and conserved domain: COG0202
>gnl|CDD|30551 COG0202, RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription]. Length = 317
Score = 303 bits (777), Expect = 5e-83
Identities = 148/319 (46%), Positives = 206/319 (64%), Gaps = 5/319 (1%)
Query: 9 LIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGV 68
+KP ++ + + + EPL RGF TLGNALRRVL+SS+ GAA+TAV+IDGV
Sbjct: 1 FLKPKKVKIE---ELSDTYAKFVIEPLERGFGVTLGNALRRVLLSSIPGAAVTAVEIDGV 57
Query: 69 LHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIEVL 128
LHE SI+GV ED+ LN+K + +K+ GD + + K GPG VTA DI D+EV+
Sbjct: 58 LHEFDSIEGVQEDVLAHRLNLKPLAVKLDGDEEVTLELDKEGPGEVTASDITVPLDLEVV 117
Query: 129 NPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYTVE 188
NPDHVI L DA + MEL V G GYVPA+ +R ++ P+G I +DA +SP++KV Y VE
Sbjct: 118 NPDHVIATLTEDAKLEMELRVYSGDGYVPAEGNREDDPPVGPIAVDAPFSPVRKVQYIVE 177
Query: 189 SAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKEVKEDINVK 248
AR GQ D D L +T+GSI E+++A+A++IL + L +F+ E++E+
Sbjct: 178 EARVGQGTDKDHLKWEPETNGSIRPEEALAIAAKILIEHLEVFVELCPKAVEIEEE--KP 235
Query: 249 SLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKG 308
P L ++EL+LSVRS NCL+ E I +G+L+QRTE ++L++ N G+KSL EIK
Sbjct: 236 EFPILLVLEAPIDELDLSVRSYNCLKREGIETIGELVQRTEEELLKVENLGKKSLEEIKE 295
Query: 309 VLGTMGLFLGMNLPDWPPE 327
L +GL LGM L +WPP
Sbjct: 296 KLAELGLELGMELENWPPS 314