RPSBLAST alignment for GI: 254780237 and conserved domain: COG0202

>gnl|CDD|30551 COG0202, RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription]. Length = 317
 Score =  303 bits (777), Expect = 5e-83
 Identities = 148/319 (46%), Positives = 206/319 (64%), Gaps = 5/319 (1%)

Query: 9   LIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQIDGV 68
            +KP  ++     +  +     + EPL RGF  TLGNALRRVL+SS+ GAA+TAV+IDGV
Sbjct: 1   FLKPKKVKIE---ELSDTYAKFVIEPLERGFGVTLGNALRRVLLSSIPGAAVTAVEIDGV 57

Query: 69  LHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQTVNDIEVL 128
           LHE  SI+GV ED+    LN+K + +K+ GD    + + K GPG VTA DI    D+EV+
Sbjct: 58  LHEFDSIEGVQEDVLAHRLNLKPLAVKLDGDEEVTLELDKEGPGEVTASDITVPLDLEVV 117

Query: 129 NPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPIKKVSYTVE 188
           NPDHVI  L  DA + MEL V  G GYVPA+ +R ++ P+G I +DA +SP++KV Y VE
Sbjct: 118 NPDHVIATLTEDAKLEMELRVYSGDGYVPAEGNREDDPPVGPIAVDAPFSPVRKVQYIVE 177

Query: 189 SAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKEVKEDINVK 248
            AR GQ  D D L    +T+GSI  E+++A+A++IL + L +F+       E++E+    
Sbjct: 178 EARVGQGTDKDHLKWEPETNGSIRPEEALAIAAKILIEHLEVFVELCPKAVEIEEE--KP 235

Query: 249 SLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKG 308
             P    L   ++EL+LSVRS NCL+ E I  +G+L+QRTE ++L++ N G+KSL EIK 
Sbjct: 236 EFPILLVLEAPIDELDLSVRSYNCLKREGIETIGELVQRTEEELLKVENLGKKSLEEIKE 295

Query: 309 VLGTMGLFLGMNLPDWPPE 327
            L  +GL LGM L +WPP 
Sbjct: 296 KLAELGLELGMELENWPPS 314