RPSBLAST alignment of GI: 254780237 and MMDB domain: 2a6h_A_1-47_173-315

>2a6h_A (A:1-47,A:173-315) DNA-directed RNA polymerase alpha chain; RNA polymerase holoenzyme, streptolydigin, antibiotic, transcription regulation; HET: STD; 2.40A {Thermus thermophilus}Length = 190

 Score =  140 bits (353), Expect = 3e-34
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 2/144 (1%)

Query: 176 LYSPIKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFE 235
           L SP+++V++ VE  R GQ  D DKL++ I TDGS+T  +++  A  IL++ L  F N +
Sbjct: 45  LSSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ 104

Query: 236 EPKKEVKEDINVKS--LPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADML 293
                  E+             L   +EEL LS R  + L+ E I  +  L+     D+ 
Sbjct: 105 AAAVAAPEEAKEPEAPPEQEEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLK 164

Query: 294 RMANFGRKSLVEIKGVLGTMGLFL 317
            +   G +SL EIK  L   G  L
Sbjct: 165 NIPGIGERSLEEIKEALEKKGFTL 188