RPSBLAST alignment of GI: 254780237 and SCOP domain: d1smya2

Alignment

 Score =  130 bits (328), Expect = 2e-31
 Identities = 50/124 (40%), Positives = 75/124 (60%), Gaps = 3/124 (2%)

Query: 57  GAAITAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHK--RVTIFKRGPGVV 114
           G A+T+V I+ VLHE S+I GV ED+ +IILN+K + ++    S +   + +   GP  V
Sbjct: 1   GTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEV 60

Query: 115 TAGDIQTVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITID 174
            A D   V D+E++NPD  I  L+    + ME+ V +G GYVPA+ H  + D I  I +D
Sbjct: 61  KARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIK-DRINAIPVD 119

Query: 175 ALYS 178
           A++S
Sbjct: 120 AVFS 123

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Insert subdomain of RNA polymerase alpha subunit
superfamily: Insert subdomain of RNA polymerase alpha subunit
family: Insert subdomain of RNA polymerase alpha subunit
domain: RNA polymerase alpha subunit
species: Thermus thermophilus [TaxId: 274]