HHsearch alignment for GI: 254780238 and conserved domain: CHL00139

Probab=97.25  E-value=0.0033  Score=40.52  Aligned_cols=87  Identities=21%  Similarity=0.247  Sum_probs=63.9

Q ss_pred             CEEEEEEECCCCEEEEEE-CCCCCEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---
Q ss_conf             218999917987799997-0899889974044435577543--3520378999999999998698199999977998---
Q gi|254780238|r   18 SGRAHVVSTFNNTRITIT-DPHGNTIAWSSPKVVGFSGSRK--NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA---   91 (129)
Q Consensus        18 ~GiihI~~t~NNTiitlT-d~~Gn~i~~~S~G~~gfkg~kk--~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~---   91 (129)
T Consensus        15 rpRL~V~rSnkhiyaQiIDD~~g~tl~saST~~k~~~~~~~~~~n~e~A~~vG~~ia~~a~~~gI~~V-vFDRg-gy~YH   92 (109)
T CHL00139         15 RPRLSVFRSNKHIYAQIIDDTNGKTLVSCSTLDPDVKSNLSIGSTCDASKLVGQKLAKKSLKKGITKV-VFDRG-GKLYH   92 (109)
T ss_pred             CCEEEEEECCCEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEE-EECCC-CCCCH
T ss_conf             88899997088189999987999899996233677765514786699999999999999998799999-98589-98422


Q ss_pred             CHH-HHHHHHHHCCCE
Q ss_conf             678-887787636936
Q gi|254780238|r   92 GRD-SALRALRAIGFT  106 (129)
Q Consensus        92 GR~-~~ik~l~~~glk  106 (129)
T Consensus        93 GrVkalAd~aRe~GLk  108 (109)
T CHL00139         93 GRIKALAEAAREAGLQ  108 (109)
T ss_pred             HHHHHHHHHHHHCCCC
T ss_conf             1999999999984898