HHsearch alignment for GI: 254780238 and conserved domain: PRK05593

>PRK05593 rplR 50S ribosomal protein L18; Reviewed.
Probab=97.17  E-value=0.0039  Score=40.07  Aligned_cols=86  Identities=23%  Similarity=0.240  Sum_probs=62.9

Q ss_pred             CCEEEEEEECCCCEEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---C
Q ss_conf             5218999917987799997089-98899740444355775433520378999999999998698199999977998---6
Q gi|254780238|r   17 VSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA---G   92 (129)
Q Consensus        17 ~~GiihI~~t~NNTiitlTd~~-Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~---G   92 (129)
T Consensus        24 ~rpRL~VfrSnkhiyaQiIDD~~~~tl~saST~~k~~~~--~~n~~~A~~vG~~ia~~a~~~~I~~v-~FDR~-g~~YHG   99 (115)
T PRK05593         24 ERPRLSVFRSNRHIYAQVIDDVKGKTLASASTLEKDLKA--GGNKEAAKKVGKLIAERAKAKGIKQV-VFDRG-GYKYHG   99 (115)
T ss_pred             CCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHHHC--CCCHHHHHHHHHHHHHHHHHCCCCEE-EECCC-CCCCCH
T ss_conf             986799996088279999986999799997414244416--88499999999999999998799889-98189-984223


Q ss_pred             HHHH-HHHHHHCCCE
Q ss_conf             7888-7787636936
Q gi|254780238|r   93 RDSA-LRALRAIGFT  106 (129)
Q Consensus        93 R~~~-ik~l~~~glk  106 (129)
T Consensus       100 rvkalAd~aRe~Gl~  114 (115)
T PRK05593        100 RVKALADAAREAGLK  114 (115)
T ss_pred             HHHHHHHHHHHCCCC
T ss_conf             999999999984899