HHsearch alignment of GI: 254780238 and MMDB domain: 2zkq_k_
>2zkq_k (k:) 40S ribosomal protein S14E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=8.9e-43 Score=282.25 Aligned_cols=120 Identities=31% Similarity=0.465 Sum_probs=114.7
Q ss_pred CCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 3430012252189999179877999970899889974044435577543-352037899999999999869819999997
Q gi|254780238|r 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK-NSPFAAQVATDDCSAKAQNHGMSSLEVKVS 87 (129)
Q Consensus 9 ~~k~~~~i~~GiihI~~t~NNTiitlTd~~Gn~i~~~S~G~~gfkg~kk-~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ik 87 (129)
.++.++.++.|++||++|+|||||||||++||+++|+|+|++||++.+| +|+|||+++++.++++++++||+.|+|+++
T Consensus 19 ~~~~~~~~~~~ivhI~~t~NNT~itlTd~~g~~~~~~S~G~~gfk~~~k~~t~~Aa~~aa~~~~~~~~~~Gik~v~v~ik 98 (151)
T 2zkq_k 19 PQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98 (151)
T ss_dssp ----CCCCSBCCEEEEECSSCEEEEEECTTCCEEEEEESTTSSCCTTTTTTSHHHHHHHHHHHHHHTTTTCCCBCCEEEE
T ss_pred CCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_conf 63035860789999996148827999869999899996576554547656653478999999999999819709999998
Q ss_pred C--------CCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 7--------9986788877876369369999963889888868888678
Q gi|254780238|r 88 G--------LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128 (129)
Q Consensus 88 G--------~G~GR~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RR 128 (129)
| ||+||+++|++|+..|++|.+|+|+||+|||||||||+||
T Consensus 99 G~~~~~~~~~G~Gr~~~ik~L~~~~lkI~~I~D~TpiphnGcRp~K~RR 147 (151)
T 2zkq_k 99 ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147 (151)
T ss_dssp SSCCBTTBCCCTTHHHHHHHHHHHTCCCSCEECCCCCCCSCSCCSCTTC
T ss_pred EECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 5247666678875588899998789789999987999989989998877