HHsearch results for GI: 254780238 and protein with PDBid: 3ofo_K
>3ofo_K 30S ribosomal protein S11; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_K* 3iy8_K 2wwl_K 3ofp_K 3i1m_K 1vs7_K* 3e1a_C 3e1c_C 1vs5_K 3i1o_K 3i1q_K 3i1s_K 3i1z_K 3i21_K 3kc4_K 3or9_K 3ora_K 2qal_K* 1p6g_K 1p87_K ...
Probab=100.00 E-value=1.4e-45 Score=299.55 Aligned_cols=117 Identities=52% Similarity=0.912 Sum_probs=115.0
Q ss_pred EEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
Q ss_conf 01225218999917987799997089988997404443557754335203789999999999986981999999779986
Q gi|254780238|r 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG 92 (129)
Q Consensus 13 ~~~i~~GiihI~~t~NNTiitlTd~~Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~G 92 (129)
+++++.|++||++|+||||+||||++||+++|+|+|++||||++|+|||||+++++.++++++++||+.|+|+++|+|+|
T Consensus 1 ~~~~~~GivhI~~t~NNT~itlTD~~G~~~~~~S~G~~gfKg~kk~t~~Aa~~~a~~~~~~~~~~Gi~~v~v~~kG~G~g 80 (117)
T 3ofo_K 1 RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPG 80 (117)
T ss_dssp CCCCEEEEEEEEECSSCEEEEEEETTCCCCEEEETGGGSCCGGGTTSHHHHHHHHHHHHTTTGGGCEEEEEEEEESSSTT
T ss_pred CCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
T ss_conf 95430279999915898999998799999999947861318876799379999999999999983996999999799887
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 7888778763693699999638898888688886789
Q gi|254780238|r 93 RDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129 (129)
Q Consensus 93 R~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi 129 (129)
|++++++|+..|++|.+|+|+||+|||||||||+|||
T Consensus 81 r~~~ik~l~~~gikI~~I~D~T~~phnGcRp~K~RRv 117 (117)
T 3ofo_K 81 RESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 117 (117)
T ss_dssp TTHHHHHHHTTTCCCCCEEECCCCCSSCSCCCCCCCC
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 7999999975898799999899999899897999899