HHsearch results for GI: 254780238 and protein with PDBid: 3ofo_K

>3ofo_K 30S ribosomal protein S11; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_K* 3iy8_K 2wwl_K 3ofp_K 3i1m_K 1vs7_K* 3e1a_C 3e1c_C 1vs5_K 3i1o_K 3i1q_K 3i1s_K 3i1z_K 3i21_K 3kc4_K 3or9_K 3ora_K 2qal_K* 1p6g_K 1p87_K ...
Probab=100.00  E-value=1.4e-45  Score=299.55  Aligned_cols=117  Identities=52%  Similarity=0.912  Sum_probs=115.0

Q ss_pred             EEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
Q ss_conf             01225218999917987799997089988997404443557754335203789999999999986981999999779986
Q gi|254780238|r   13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG   92 (129)
Q Consensus        13 ~~~i~~GiihI~~t~NNTiitlTd~~Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~G   92 (129)
                      +++++.|++||++|+||||+||||++||+++|+|+|++||||++|+|||||+++++.++++++++||+.|+|+++|+|+|
T Consensus         1 ~~~~~~GivhI~~t~NNT~itlTD~~G~~~~~~S~G~~gfKg~kk~t~~Aa~~~a~~~~~~~~~~Gi~~v~v~~kG~G~g   80 (117)
T 3ofo_K            1 RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPG   80 (117)
T ss_dssp             CCCCEEEEEEEEECSSCEEEEEEETTCCCCEEEETGGGSCCGGGTTSHHHHHHHHHHHHTTTGGGCEEEEEEEEESSSTT
T ss_pred             CCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
T ss_conf             95430279999915898999998799999999947861318876799379999999999999983996999999799887


Q ss_pred             HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             7888778763693699999638898888688886789
Q gi|254780238|r   93 RDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI  129 (129)
Q Consensus        93 R~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi  129 (129)
                      |++++++|+..|++|.+|+|+||+|||||||||+|||
T Consensus        81 r~~~ik~l~~~gikI~~I~D~T~~phnGcRp~K~RRv  117 (117)
T 3ofo_K           81 RESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV  117 (117)
T ss_dssp             TTHHHHHHHTTTCCCCCEEECCCCCSSCSCCCCCCCC
T ss_pred             HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             7999999975898799999899999899897999899