HHSEARCH alignment of GI: 254780238 and SCOP domain: d1ovya_

Alignment
>d1ovya_ c.55.4.1 (A:) Ribosomal protein L18 (L18p) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.00  E-value=0.00045  Score=43.01  Aligned_cols=86  Identities=22%  Similarity=0.212  Sum_probs=64.6

Q ss_pred             EEEEEECCCCEEEEEECC-CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC-CCC-CH-HH
Q ss_conf             899991798779999708-998899740444355775433520378999999999998698199999977-998-67-88
Q gi|254780238|r   20 RAHVVSTFNNTRITITDP-HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG-LGA-GR-DS   95 (129)
Q Consensus        20 iihI~~t~NNTiitlTd~-~Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG-~G~-GR-~~   95 (129)
                      .+.|+.|.+|+.+++.|. .|.++..+|+=...++....+.-.||..+++.+++++++.|+..+..- +| +-+ || .+
T Consensus         7 RL~V~kSnkhiyaQlIdd~~~~tl~s~St~~k~~~~~~~~n~~aA~~vG~~~a~kak~~gi~~vvfD-r~g~~yhGrvka   85 (97)
T d1ovya_           7 RLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLDSTNNIEAAKKVGELVAKRALEKGIKQVVFD-RGGYLYHGRVKA   85 (97)
T ss_dssp             SEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTCSSCTTSHHHHHHHHHHHHHHHHHHSSSCCCCC-STTCSSCSSTHH
T ss_pred             EEEEEEECCEEEEEEEECCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCHHHHHH
T ss_conf             8999983783899999757980899731133443123457399999999999999998699789973-799714189999


Q ss_pred             HHHHHHHCCCE
Q ss_conf             87787636936
Q gi|254780238|r   96 ALRALRAIGFT  106 (129)
Q Consensus        96 ~ik~l~~~glk  106 (129)
                      +..++...||+
T Consensus        86 ~a~~~R~~Gl~   96 (97)
T d1ovya_          86 LADAAREAGLE   96 (97)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHCCC
T ss_conf             99999982888


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Translational machinery components
family: Ribosomal protein L18 and S11
domain: Ribosomal protein L18 (L18p)
species: Bacillus stearothermophilus [TaxId: 1422]