HHSEARCH alignment of GI: 254780238 and SCOP domain: d1vqon1

Alignment
>d1vqon1 c.55.4.1 (N:1-186) Ribosomal protein L18 (L18p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=97.26  E-value=0.0011  Score=40.75  Aligned_cols=100  Identities=15%  Similarity=0.124  Sum_probs=74.8

Q ss_pred             CCEEEEEEECCCCEEEEEE--CCCC-CEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEE--EECC
Q ss_conf             5218999917987799997--0899-889974044435577543--3520378999999999998698199999--9779
Q gi|254780238|r   17 VSGRAHVVSTFNNTRITIT--DPHG-NTIAWSSPKVVGFSGSRK--NSPFAAQVATDDCSAKAQNHGMSSLEVK--VSGL   89 (129)
Q Consensus        17 ~~GiihI~~t~NNTiitlT--d~~G-n~i~~~S~G~~gfkg~kk--~t~~Aa~~~a~~~~~~~~~~gi~~v~v~--ikG~   89 (129)
                      ....+.|+.|.+|+++.+.  |..| .+++.+|+-.+..++.+.  ....||+.++..+++++++.|+..+.+-  ..|+
T Consensus        30 ~kpRLvVrrSNk~IyaQII~~d~~gd~vlaSAsS~el~k~g~k~~~~N~~AAy~~G~liA~ra~~~gi~~vvfD~G~~~~  109 (186)
T d1vqon1          30 GKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSP  109 (186)
T ss_dssp             CSCEEEEEECSSCEEEEEEECCTTSCEEEEEEESGGGGGGSCCSCSSSHHHHHHHHHHHHHHHHHTTCCBCEEECTTSCC
T ss_pred             CCCEEEEEEECCCEEEEEEEECCCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             99769999958915999988448999799997043255420004763777998867999999986255613885077778


Q ss_pred             CC-CH-HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
Q ss_conf             98-67-88877876369369999963889888868888
Q gi|254780238|r   90 GA-GR-DSALRALRAIGFTIVSICDVTMIAHNGCRPRK  125 (129)
Q Consensus        90 G~-GR-~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K  125 (129)
                      -. || .+++++....||+         |||+-.+-|-
T Consensus       110 ~yhgRV~A~akgard~GL~---------Iph~~~~~p~  138 (186)
T d1vqon1         110 TPGSKVFAIQEGAIDAGLD---------IPHNDDVLAD  138 (186)
T ss_dssp             CTTCHHHHHHHHHHHTTCB---------CCCCGGGSCC
T ss_pred             CCCCHHHHHHHHHHHCCCC---------CCCCCCCCCC
T ss_conf             7652299999999966916---------7888765888


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Translational machinery components
family: Ribosomal protein L18 and S11
domain: Ribosomal protein L18 (L18p)
species: Archaeon Haloarcula marismortui [TaxId: 2238]