PSIBLAST alignment of GI: 254780238 and protein with PDB id: 2zkq
gi|187609264|pdb|2ZKQ|KK Chain k, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 151
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136