BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780238|ref|YP_003064651.1| 30S ribosomal protein S11
[Candidatus Liberibacter asiaticus str. psy62]
(129 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|319405875|emb|CBI79507.1| 30S ribosomal protein S11 [Bartonella sp. AR 15-3]
Length = 129
Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKN+ SG H+ STFNNT ITITDP G+TIAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNVSSGVVHINSTFNNTMITITDPQGHTIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G GAGR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCAKKAQEHGMRSLEVEVCGPGAGRESALRALQSVGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|319404402|emb|CBI78005.1| 30S ribosomal protein S11 [Bartonella rochalimae ATCC BAA-1498]
gi|319407402|emb|CBI81053.1| 30S ribosomal protein S11 [Bartonella sp. 1-1C]
Length = 129
Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats.
Identities = 89/129 (68%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RIR RERKNI SG H+ STFNNT ITITD G+TIAWSS GF GSRK++P
Sbjct: 1 MAKEATRIRRRERKNISSGVVHINSTFNNTMITITDSQGHTIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G GAGR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCAKKAQEHGMRSLEVEVCGPGAGRESALRALQSVGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|182679002|ref|YP_001833148.1| 30S ribosomal protein S11 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226708332|sp|B2IF94|RS11_BEII9 RecName: Full=30S ribosomal protein S11
gi|182634885|gb|ACB95659.1| ribosomal protein S11 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 129
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 106/129 (82%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNIVSG AHV STFNNT ITITD GNTI+WSS ++GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNIVSGVAHVNSTFNNTMITITDAQGNTISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQMAAEDCARKAVEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|319408742|emb|CBI82399.1| 30S ribosomal protein S11 [Bartonella schoenbuchensis R1]
Length = 129
Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG H+ STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVVHINSTFNNTMITITDAQGNVIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCAKKAQEHGMRSLEVEVCGPGSGRESALRALQSVGFVITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|319899076|ref|YP_004159169.1| 30S ribosomal protein S11 [Bartonella clarridgeiae 73]
gi|319403040|emb|CBI76595.1| 30S ribosomal protein S11 [Bartonella clarridgeiae 73]
Length = 129
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 90/129 (69%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG H+ STFNNT ITITD GNTIAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVVHINSTFNNTMITITDSQGNTIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G GAGR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCAKKAQEHGMRSLEVEVCGPGAGRESALRALQSVGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRRI
Sbjct: 121 CRPRKRRRI 129
>gi|49475771|ref|YP_033812.1| 30S ribosomal protein S11 [Bartonella henselae str. Houston-1]
gi|59798705|sp|Q6G2Y8|RS11_BARHE RecName: Full=30S ribosomal protein S11
gi|49238578|emb|CAF27819.1| 30S ribosomal protein s11 [Bartonella henselae str. Houston-1]
Length = 129
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG H+ STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVVHINSTFNNTMITITDAQGNAIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCARKAQEHGMRSLEVEVCGPGSGRESALRALQSVGFIITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|240850812|ref|YP_002972212.1| 30S ribosomal protein S11 [Bartonella grahamii as4aup]
gi|240267935|gb|ACS51523.1| 30S ribosomal protein S11 [Bartonella grahamii as4aup]
Length = 129
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/129 (66%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG H+ STFNNT ITITD GN IAWSS GF G+RK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVVHINSTFNNTMITITDAQGNAIAWSSAGAQGFKGARKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCARKAQEHGMRSLEVEVCGPGSGRESALRALQSVGFVITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|220935469|ref|YP_002514368.1| 30S ribosomal protein S11 [Thioalkalivibrio sp. HL-EbGR7]
gi|254811054|sp|B8GV35|RS11_THISH RecName: Full=30S ribosomal protein S11
gi|219996779|gb|ACL73381.1| 30S ribosomal protein S11 [Thioalkalivibrio sp. HL-EbGR7]
Length = 129
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++P+R R + +K + G AH+ +TFNNT +TITD GNT++W++ GF GSRK++P
Sbjct: 1 MAQAPTRTRKKVKKTVSDGIAHIYATFNNTIVTITDRQGNTLSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV V G G GR+SA+RAL GF I++I D+T I HNG
Sbjct: 61 FAAQVAAERAGTAAQEYGLKNLEVLVRGPGPGRESAVRALNNAGFKILNISDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|254420943|ref|ZP_05034667.1| ribosomal protein S11 [Brevundimonas sp. BAL3]
gi|196187120|gb|EDX82096.1| ribosomal protein S11 [Brevundimonas sp. BAL3]
Length = 129
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R++ RERKNI SG AHV ++FNNT +TITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEPGRVKKRERKNITSGVAHVNASFNNTMVTITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV VSG G+GR+SALRAL+++G TI +I DVT + HNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVNVSGPGSGRESALRALQSVGLTITTIRDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|302382642|ref|YP_003818465.1| 30S ribosomal protein S11 [Brevundimonas subvibrioides ATCC 15264]
gi|302193270|gb|ADL00842.1| 30S ribosomal protein S11 [Brevundimonas subvibrioides ATCC 15264]
Length = 129
Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R++ RERKNI SG AHV ++FNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEPGRVKKRERKNITSGVAHVNASFNNTMITITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV VSG G+GR+SALRAL+++G TI +I DVT + HNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVNVSGPGSGRESALRALQSVGLTITTIRDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|315497996|ref|YP_004086800.1| 30S ribosomal protein s11 [Asticcacaulis excentricus CB 48]
gi|315416008|gb|ADU12649.1| 30S ribosomal protein S11 [Asticcacaulis excentricus CB 48]
Length = 129
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 82/129 (63%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K PSR++ RERKNI SG AHV ++FNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEPSRVKKRERKNITSGVAHVNASFNNTMITITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HG+ +LEV V+G G+GR+SALRAL+A+GFTI +I DVT I HNG
Sbjct: 61 YAAQVAAEDAGKKAIEHGVKTLEVSVAGPGSGRESALRALQAVGFTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|83593997|ref|YP_427749.1| 30S ribosomal protein S11 [Rhodospirillum rubrum ATCC 11170]
gi|91207675|sp|Q2RQY3|RS11_RHORT RecName: Full=30S ribosomal protein S11
gi|83576911|gb|ABC23462.1| SSU ribosomal protein S11P [Rhodospirillum rubrum ATCC 11170]
Length = 129
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 82/129 (63%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++R RERKNI SG AHV ++FNNT+ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKPAQKLRRRERKNITSGIAHVSASFNNTKITITDVQGNAIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KAQ HGM +LEV V G G+GR+SALRAL+++GF + SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAQEHGMKTLEVMVKGPGSGRESALRALQSVGFQVTSIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|49474381|ref|YP_032423.1| 30S ribosomal protein S11 [Bartonella quintana str. Toulouse]
gi|59798701|sp|Q6FZE5|RS11_BARQU RecName: Full=30S ribosomal protein S11
gi|49239885|emb|CAF26283.1| 30s ribosomal protein s11 [Bartonella quintana str. Toulouse]
Length = 129
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI+SG H+ STFNNT +TITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKQATRVRRRERKNILSGVVHINSTFNNTMVTITDAQGNAIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G GAGR+SALRAL++ GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCARKAQEHGMRSLEVEVCGPGAGRESALRALQSAGFVITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|217979116|ref|YP_002363263.1| 30S ribosomal protein S11 [Methylocella silvestris BL2]
gi|254811033|sp|B8EIT4|RS11_METSB RecName: Full=30S ribosomal protein S11
gi|217504492|gb|ACK51901.1| ribosomal protein S11 [Methylocella silvestris BL2]
Length = 129
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 105/129 (81%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNIVSG AHV STFNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNIVSGVAHVNSTFNNTMITITDAQGNTISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQMAAEDCARKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|220921922|ref|YP_002497223.1| 30S ribosomal protein S11 [Methylobacterium nodulans ORS 2060]
gi|254811032|sp|B8IT34|RS11_METNO RecName: Full=30S ribosomal protein S11
gi|219946528|gb|ACL56920.1| ribosomal protein S11 [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats.
Identities = 86/129 (66%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNIVSG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNIVSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|163868627|ref|YP_001609836.1| 30S ribosomal protein S11 [Bartonella tribocorum CIP 105476]
gi|189040402|sp|A9IVZ7|RS11_BART1 RecName: Full=30S ribosomal protein S11
gi|161018283|emb|CAK01841.1| 30S ribosomal protein S11 [Bartonella tribocorum CIP 105476]
Length = 129
Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG H+ STFNNT ITITD GN IAWSS GF G+RK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVVHINSTFNNTMITITDAQGNAIAWSSAGAQGFKGARKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM SLEV+V G GAGR+SALRAL+++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEDCARKAQEHGMRSLEVEVCGPGAGRESALRALQSVGFVITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|17987063|ref|NP_539697.1| 30S ribosomal protein S11 [Brucella melitensis bv. 1 str. 16M]
gi|23502087|ref|NP_698214.1| 30S ribosomal protein S11 [Brucella suis 1330]
gi|62290121|ref|YP_221914.1| 30S ribosomal protein S11 [Brucella abortus bv. 1 str. 9-941]
gi|82700044|ref|YP_414618.1| 30S ribosomal protein S11 [Brucella melitensis biovar Abortus 2308]
gi|148560220|ref|YP_001259130.1| 30S ribosomal protein S11 [Brucella ovis ATCC 25840]
gi|153009309|ref|YP_001370524.1| 30S ribosomal protein S11 [Ochrobactrum anthropi ATCC 49188]
gi|161619165|ref|YP_001593052.1| 30S ribosomal protein S11 [Brucella canis ATCC 23365]
gi|163843475|ref|YP_001627879.1| 30S ribosomal protein S11 [Brucella suis ATCC 23445]
gi|189024359|ref|YP_001935127.1| Ribosomal protein S11 [Brucella abortus S19]
gi|225627681|ref|ZP_03785718.1| 30S ribosomal protein S11 [Brucella ceti str. Cudo]
gi|225852706|ref|YP_002732939.1| 30S ribosomal protein S11 [Brucella melitensis ATCC 23457]
gi|237815629|ref|ZP_04594626.1| 30S ribosomal protein S11 [Brucella abortus str. 2308 A]
gi|239832099|ref|ZP_04680428.1| 30S ribosomal protein S11 [Ochrobactrum intermedium LMG 3301]
gi|254689430|ref|ZP_05152684.1| 30S ribosomal protein S11 [Brucella abortus bv. 6 str. 870]
gi|254693915|ref|ZP_05155743.1| 30S ribosomal protein S11 [Brucella abortus bv. 3 str. Tulya]
gi|254697565|ref|ZP_05159393.1| 30S ribosomal protein S11 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701951|ref|ZP_05163779.1| 30S ribosomal protein S11 [Brucella suis bv. 5 str. 513]
gi|254704495|ref|ZP_05166323.1| 30S ribosomal protein S11 [Brucella suis bv. 3 str. 686]
gi|254706609|ref|ZP_05168437.1| 30S ribosomal protein S11 [Brucella pinnipedialis M163/99/10]
gi|254710281|ref|ZP_05172092.1| 30S ribosomal protein S11 [Brucella pinnipedialis B2/94]
gi|254714278|ref|ZP_05176089.1| 30S ribosomal protein S11 [Brucella ceti M644/93/1]
gi|254717715|ref|ZP_05179526.1| 30S ribosomal protein S11 [Brucella ceti M13/05/1]
gi|254719268|ref|ZP_05181079.1| 30S ribosomal protein S11 [Brucella sp. 83/13]
gi|254730459|ref|ZP_05189037.1| 30S ribosomal protein S11 [Brucella abortus bv. 4 str. 292]
gi|256031775|ref|ZP_05445389.1| 30S ribosomal protein S11 [Brucella pinnipedialis M292/94/1]
gi|256044860|ref|ZP_05447764.1| 30S ribosomal protein S11 [Brucella melitensis bv. 1 str. Rev.1]
gi|256061290|ref|ZP_05451440.1| 30S ribosomal protein S11 [Brucella neotomae 5K33]
gi|256113764|ref|ZP_05454568.1| 30S ribosomal protein S11 [Brucella melitensis bv. 3 str. Ether]
gi|256159945|ref|ZP_05457663.1| 30S ribosomal protein S11 [Brucella ceti M490/95/1]
gi|256255176|ref|ZP_05460712.1| 30S ribosomal protein S11 [Brucella ceti B1/94]
gi|256257676|ref|ZP_05463212.1| 30S ribosomal protein S11 [Brucella abortus bv. 9 str. C68]
gi|256263803|ref|ZP_05466335.1| ribosomal protein S11 [Brucella melitensis bv. 2 str. 63/9]
gi|256369634|ref|YP_003107144.1| 30S ribosomal protein S11 [Brucella microti CCM 4915]
gi|260168909|ref|ZP_05755720.1| 30S ribosomal protein S11 [Brucella sp. F5/99]
gi|260546669|ref|ZP_05822408.1| ribosomal protein S11 [Brucella abortus NCTC 8038]
gi|260565538|ref|ZP_05836022.1| ribosomal protein S11 [Brucella melitensis bv. 1 str. 16M]
gi|260566261|ref|ZP_05836731.1| ribosomal protein S11 [Brucella suis bv. 4 str. 40]
gi|260754953|ref|ZP_05867301.1| ribosomal protein S11 [Brucella abortus bv. 6 str. 870]
gi|260758169|ref|ZP_05870517.1| ribosomal protein S11 [Brucella abortus bv. 4 str. 292]
gi|260761995|ref|ZP_05874338.1| ribosomal protein S11 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883962|ref|ZP_05895576.1| ribosomal protein S11 [Brucella abortus bv. 9 str. C68]
gi|261214206|ref|ZP_05928487.1| ribosomal protein S11 [Brucella abortus bv. 3 str. Tulya]
gi|261219557|ref|ZP_05933838.1| ribosomal protein S11 [Brucella ceti M13/05/1]
gi|261222372|ref|ZP_05936653.1| SSU ribosomal protein S11P [Brucella ceti B1/94]
gi|261314069|ref|ZP_05953266.1| ribosomal protein S11 [Brucella pinnipedialis M163/99/10]
gi|261317843|ref|ZP_05957040.1| ribosomal protein S11 [Brucella pinnipedialis B2/94]
gi|261322052|ref|ZP_05961249.1| SSU ribosomal protein S11P [Brucella ceti M644/93/1]
gi|261325297|ref|ZP_05964494.1| ribosomal protein S11 [Brucella neotomae 5K33]
gi|261752518|ref|ZP_05996227.1| ribosomal protein S11 [Brucella suis bv. 5 str. 513]
gi|261755177|ref|ZP_05998886.1| ribosomal protein S11 [Brucella suis bv. 3 str. 686]
gi|261758401|ref|ZP_06002110.1| ribosomal protein S11 [Brucella sp. F5/99]
gi|265984267|ref|ZP_06097002.1| ribosomal protein S11 [Brucella sp. 83/13]
gi|265988873|ref|ZP_06101430.1| ribosomal protein S11 [Brucella pinnipedialis M292/94/1]
gi|265991287|ref|ZP_06103844.1| ribosomal protein S11 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995124|ref|ZP_06107681.1| ribosomal protein S11 [Brucella melitensis bv. 3 str. Ether]
gi|265998337|ref|ZP_06110894.1| ribosomal protein S11 [Brucella ceti M490/95/1]
gi|294852545|ref|ZP_06793218.1| 30S ribosomal protein S11 [Brucella sp. NVSL 07-0026]
gi|297248516|ref|ZP_06932234.1| 30S ribosomal protein S11 [Brucella abortus bv. 5 str. B3196]
gi|306838019|ref|ZP_07470877.1| 30S ribosomal protein S11 [Brucella sp. NF 2653]
gi|306840324|ref|ZP_07473096.1| 30S ribosomal protein S11 [Brucella sp. BO2]
gi|306844113|ref|ZP_07476707.1| 30S ribosomal protein S11 [Brucella sp. BO1]
gi|54039330|sp|P66351|RS11_BRUSU RecName: Full=30S ribosomal protein S11
gi|54042107|sp|P66350|RS11_BRUME RecName: Full=30S ribosomal protein S11
gi|75496694|sp|Q57CT1|RS11_BRUAB RecName: Full=30S ribosomal protein S11
gi|91207732|sp|Q2YRT9|RS11_BRUA2 RecName: Full=30S ribosomal protein S11
gi|166231802|sp|A5VQY3|RS11_BRUO2 RecName: Full=30S ribosomal protein S11
gi|166231821|sp|A6X0E1|RS11_OCHA4 RecName: Full=30S ribosomal protein S11
gi|189040403|sp|A9M5M6|RS11_BRUC2 RecName: Full=30S ribosomal protein S11
gi|189040404|sp|B0CH08|RS11_BRUSI RecName: Full=30S ribosomal protein S11
gi|226708336|sp|B2S656|RS11_BRUA1 RecName: Full=30S ribosomal protein S11
gi|254765370|sp|C0RJH7|RS11_BRUMB RecName: Full=30S ribosomal protein S11
gi|17982720|gb|AAL51961.1| ssu ribosomal protein s11p [Brucella melitensis bv. 1 str. 16M]
gi|23348046|gb|AAN30129.1| ribosomal protein S11 [Brucella suis 1330]
gi|62196253|gb|AAX74553.1| RpsK, ribosomal protein S11 [Brucella abortus bv. 1 str. 9-941]
gi|82616145|emb|CAJ11188.1| Ribosomal protein S11 [Brucella melitensis biovar Abortus 2308]
gi|148371477|gb|ABQ61456.1| ribosomal protein S11 [Brucella ovis ATCC 25840]
gi|151561197|gb|ABS14695.1| ribosomal protein S11 [Ochrobactrum anthropi ATCC 49188]
gi|161335976|gb|ABX62281.1| 30S ribosomal protein S11 [Brucella canis ATCC 23365]
gi|163674198|gb|ABY38309.1| 30S ribosomal protein S11 [Brucella suis ATCC 23445]
gi|189019931|gb|ACD72653.1| Ribosomal protein S11 [Brucella abortus S19]
gi|225617686|gb|EEH14731.1| 30S ribosomal protein S11 [Brucella ceti str. Cudo]
gi|225641071|gb|ACO00985.1| 30S ribosomal protein S11 [Brucella melitensis ATCC 23457]
gi|237788927|gb|EEP63138.1| 30S ribosomal protein S11 [Brucella abortus str. 2308 A]
gi|239824366|gb|EEQ95934.1| 30S ribosomal protein S11 [Ochrobactrum intermedium LMG 3301]
gi|255999796|gb|ACU48195.1| 30S ribosomal protein S11 [Brucella microti CCM 4915]
gi|260095719|gb|EEW79596.1| ribosomal protein S11 [Brucella abortus NCTC 8038]
gi|260151606|gb|EEW86700.1| ribosomal protein S11 [Brucella melitensis bv. 1 str. 16M]
gi|260155779|gb|EEW90859.1| ribosomal protein S11 [Brucella suis bv. 4 str. 40]
gi|260668487|gb|EEX55427.1| ribosomal protein S11 [Brucella abortus bv. 4 str. 292]
gi|260672427|gb|EEX59248.1| ribosomal protein S11 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675061|gb|EEX61882.1| ribosomal protein S11 [Brucella abortus bv. 6 str. 870]
gi|260873490|gb|EEX80559.1| ribosomal protein S11 [Brucella abortus bv. 9 str. C68]
gi|260915813|gb|EEX82674.1| ribosomal protein S11 [Brucella abortus bv. 3 str. Tulya]
gi|260920956|gb|EEX87609.1| SSU ribosomal protein S11P [Brucella ceti B1/94]
gi|260924646|gb|EEX91214.1| ribosomal protein S11 [Brucella ceti M13/05/1]
gi|261294742|gb|EEX98238.1| SSU ribosomal protein S11P [Brucella ceti M644/93/1]
gi|261297066|gb|EEY00563.1| ribosomal protein S11 [Brucella pinnipedialis B2/94]
gi|261301277|gb|EEY04774.1| ribosomal protein S11 [Brucella neotomae 5K33]
gi|261303095|gb|EEY06592.1| ribosomal protein S11 [Brucella pinnipedialis M163/99/10]
gi|261738385|gb|EEY26381.1| ribosomal protein S11 [Brucella sp. F5/99]
gi|261742271|gb|EEY30197.1| ribosomal protein S11 [Brucella suis bv. 5 str. 513]
gi|261744930|gb|EEY32856.1| ribosomal protein S11 [Brucella suis bv. 3 str. 686]
gi|262552805|gb|EEZ08795.1| ribosomal protein S11 [Brucella ceti M490/95/1]
gi|262766237|gb|EEZ12026.1| ribosomal protein S11 [Brucella melitensis bv. 3 str. Ether]
gi|263002071|gb|EEZ14646.1| ribosomal protein S11 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093931|gb|EEZ17865.1| ribosomal protein S11 [Brucella melitensis bv. 2 str. 63/9]
gi|264661070|gb|EEZ31331.1| ribosomal protein S11 [Brucella pinnipedialis M292/94/1]
gi|264662859|gb|EEZ33120.1| ribosomal protein S11 [Brucella sp. 83/13]
gi|294821134|gb|EFG38133.1| 30S ribosomal protein S11 [Brucella sp. NVSL 07-0026]
gi|297175685|gb|EFH35032.1| 30S ribosomal protein S11 [Brucella abortus bv. 5 str. B3196]
gi|306275556|gb|EFM57288.1| 30S ribosomal protein S11 [Brucella sp. BO1]
gi|306289723|gb|EFM60912.1| 30S ribosomal protein S11 [Brucella sp. BO2]
gi|306406943|gb|EFM63164.1| 30S ribosomal protein S11 [Brucella sp. NF 2653]
gi|326409231|gb|ADZ66296.1| Ribosomal protein S11 [Brucella melitensis M28]
gi|326538939|gb|ADZ87154.1| 30S ribosomal protein S11 [Brucella melitensis M5-90]
Length = 129
Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEDCAKKAQEHGMRSLEVEVCGPGSGRESALRALQAAGFVITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|170738680|ref|YP_001767335.1| 30S ribosomal protein S11 [Methylobacterium sp. 4-46]
gi|226708387|sp|B0UHU6|RS11_METS4 RecName: Full=30S ribosomal protein S11
gi|168192954|gb|ACA14901.1| ribosomal protein S11 [Methylobacterium sp. 4-46]
Length = 129
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RIR RERKNIVSG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEATRIRRRERKNIVSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|310941693|dbj|BAJ24200.1| 30S ribosomal protein S11 [Pseudomonas alcaligenes]
Length = 129
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARTRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL A G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|312115710|ref|YP_004013306.1| 30S ribosomal protein S11 [Rhodomicrobium vannielii ATCC 17100]
gi|311220839|gb|ADP72207.1| 30S ribosomal protein S11 [Rhodomicrobium vannielii ATCC 17100]
Length = 129
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ RE+KNI SG AHV ++FNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEKARVKRREKKNIASGVAHVNASFNNTMITITDAQGNAISWSSSGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KAQ HGM ++E++VSG G+GR+SALRAL+A GF + SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAQEHGMRTIEIEVSGPGSGRESALRALQACGFQVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|16125520|ref|NP_420084.1| 30S ribosomal protein S11 [Caulobacter crescentus CB15]
gi|221234266|ref|YP_002516702.1| 30S ribosomal protein S11 [Caulobacter crescentus NA1000]
gi|33112614|sp|Q9A8T0|RS11_CAUCR RecName: Full=30S ribosomal protein S11
gi|254765374|sp|B8H4F7|RS11_CAUCN RecName: Full=30S ribosomal protein S11
gi|13422604|gb|AAK23252.1| ribosomal protein S11 [Caulobacter crescentus CB15]
gi|220963438|gb|ACL94794.1| SSU ribosomal protein S11P [Caulobacter crescentus NA1000]
Length = 129
Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats.
Identities = 81/129 (62%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R++ RERKNI SG AHV ++FNNT ITITD GNTI+WSS ++GF GSRK++P
Sbjct: 1 MAKEPARVKRRERKNITSGVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV VSG G+GR+SALRAL+A G TI +I DVT I HNG
Sbjct: 61 YAAQMAAEDAGKKAAEHGVKTLEVNVSGPGSGRESALRALQAAGMTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|221133738|ref|ZP_03560043.1| 30S ribosomal protein S11 [Glaciecola sp. HTCC2999]
Length = 129
Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R + R ++ + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKAPTRAKKRAKRQVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV V G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEAAQEYGLKNLEVFVKGPGPGRESAIRALNATGYKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|154253200|ref|YP_001414024.1| 30S ribosomal protein S11 [Parvibaculum lavamentivorans DS-1]
gi|171769645|sp|A7HWT4|RS11_PARL1 RecName: Full=30S ribosomal protein S11
gi|154157150|gb|ABS64367.1| ribosomal protein S11 [Parvibaculum lavamentivorans DS-1]
Length = 129
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ +ERKNI SG AHV STFNNT ITI D GN I+WSS ++GF GSRK++P
Sbjct: 1 MAKEKTRVKRKERKNISSGVAHVNSTFNNTMITIADAQGNAISWSSAGLMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D KA HGM +LEV+V G G+GR+SALRAL+++GFT+ +I DVT I HNG
Sbjct: 61 FAAQMAAEDAGKKAMEHGMRTLEVEVCGPGSGRESALRALQSVGFTVTTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|295688929|ref|YP_003592622.1| 30S ribosomal protein S11 [Caulobacter segnis ATCC 21756]
gi|295430832|gb|ADG10004.1| 30S ribosomal protein S11 [Caulobacter segnis ATCC 21756]
Length = 129
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 81/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R++ RERKNI SG AHV ++FNNT ITITD GNTI+WSS ++GF GSRK++P
Sbjct: 1 MAKEPGRVKRRERKNITSGVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV VSG G+GR+SALRAL+A G TI +I DVT I HNG
Sbjct: 61 YAAQMAAEDAGKKAAEHGVKTLEVNVSGPGSGRESALRALQAAGMTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|15599436|ref|NP_252930.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa PAO1]
gi|116052275|ref|YP_788879.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152983718|ref|YP_001346246.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa PA7]
gi|218889431|ref|YP_002438295.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa LESB58]
gi|226942801|ref|YP_002797874.1| 30S ribosomal protein S11 [Azotobacter vinelandii DJ]
gi|254237104|ref|ZP_04930427.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa C3719]
gi|254242911|ref|ZP_04936233.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa 2192]
gi|296387203|ref|ZP_06876702.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa PAb1]
gi|313111394|ref|ZP_07797199.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa 39016]
gi|48474659|sp|Q9HWF8|RS11_PSEAE RecName: Full=30S ribosomal protein S11
gi|122261424|sp|Q02T57|RS11_PSEAB RecName: Full=30S ribosomal protein S11
gi|166231823|sp|A6UZL1|RS11_PSEA7 RecName: Full=30S ribosomal protein S11
gi|226708403|sp|B7V666|RS11_PSEA8 RecName: Full=30S ribosomal protein S11
gi|259494614|sp|C1DKN6|RS11_AZOVD RecName: Full=30S ribosomal protein S11
gi|9950457|gb|AAG07628.1|AE004841_6 30S ribosomal protein S11 [Pseudomonas aeruginosa PAO1]
gi|115587496|gb|ABJ13511.1| ribosomal protein S11 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169035|gb|EAZ54546.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa C3719]
gi|126196289|gb|EAZ60352.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa 2192]
gi|150958876|gb|ABR80901.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa PA7]
gi|218769654|emb|CAW25414.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa LESB58]
gi|226717728|gb|ACO76899.1| 30S ribosomal protein S11 [Azotobacter vinelandii DJ]
gi|310883701|gb|EFQ42295.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa 39016]
gi|310941723|dbj|BAJ24215.1| 30S ribosomal protein S11 [Pseudomonas aeruginosa]
Length = 129
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL A G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|146308900|ref|YP_001189365.1| 30S ribosomal protein S11 [Pseudomonas mendocina ymp]
gi|330505184|ref|YP_004382053.1| 30S ribosomal protein S11 [Pseudomonas mendocina NK-01]
gi|166231824|sp|A4XZ67|RS11_PSEMY RecName: Full=30S ribosomal protein S11
gi|145577101|gb|ABP86633.1| SSU ribosomal protein S11P [Pseudomonas mendocina ymp]
gi|310941843|dbj|BAJ24275.1| 30S ribosomal protein S11 [Pseudomonas mendocina]
gi|328919470|gb|AEB60301.1| 30S ribosomal protein S11 [Pseudomonas mendocina NK-01]
Length = 129
Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARTRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + A +G+ +L+V V G G GR+SA+RAL A G+ I SI DVT I HNG
Sbjct: 61 FAAQIAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|222148389|ref|YP_002549346.1| 30S ribosomal protein S11 [Agrobacterium vitis S4]
gi|254765360|sp|B9JVR0|RS11_AGRVS RecName: Full=30S ribosomal protein S11
gi|221735377|gb|ACM36340.1| 30S ribosomal protein S11 [Agrobacterium vitis S4]
Length = 129
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|167645601|ref|YP_001683264.1| 30S ribosomal protein S11 [Caulobacter sp. K31]
gi|189040406|sp|B0T2E5|RS11_CAUSK RecName: Full=30S ribosomal protein S11
gi|167348031|gb|ABZ70766.1| ribosomal protein S11 [Caulobacter sp. K31]
Length = 129
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 81/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R++ RERKNI SG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEPARVKKRERKNITSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV VSG G+GR+SALRAL+A G TI +I DVT I HNG
Sbjct: 61 YAAQMAAEDAGKKAAEHGVKTLEVNVSGPGSGRESALRALQAAGMTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|28867877|ref|NP_790496.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66047753|ref|YP_237594.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. syringae B728a]
gi|71735671|ref|YP_276683.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77461278|ref|YP_350785.1| 30S ribosomal protein S11 [Pseudomonas fluorescens Pf0-1]
gi|213969237|ref|ZP_03397375.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato T1]
gi|229592880|ref|YP_002874999.1| 30S ribosomal protein S11 [Pseudomonas fluorescens SBW25]
gi|237797455|ref|ZP_04585916.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257483208|ref|ZP_05637249.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289623826|ref|ZP_06456780.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648919|ref|ZP_06480262.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. aesculi str.
2250]
gi|289675511|ref|ZP_06496401.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. syringae FF5]
gi|298489073|ref|ZP_07007095.1| SSU ribosomal protein S11p (S14e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|301381744|ref|ZP_07230162.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato Max13]
gi|302061056|ref|ZP_07252597.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato K40]
gi|302130803|ref|ZP_07256793.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302189300|ref|ZP_07265973.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. syringae 642]
gi|330812053|ref|YP_004356515.1| 30S ribosomal protein S11 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|32171597|sp|Q889U8|RS11_PSESM RecName: Full=30S ribosomal protein S11
gi|75500422|sp|Q4ZMR6|RS11_PSEU2 RecName: Full=30S ribosomal protein S11
gi|91207669|sp|Q48D59|RS11_PSE14 RecName: Full=30S ribosomal protein S11
gi|91207672|sp|Q3K610|RS11_PSEPF RecName: Full=30S ribosomal protein S11
gi|259494631|sp|C3K2V3|RS11_PSEFS RecName: Full=30S ribosomal protein S11
gi|28851113|gb|AAO54191.1| ribosomal protein S11 [Pseudomonas syringae pv. tomato str. DC3000]
gi|63258460|gb|AAY39556.1| Ribosomal protein S11 [Pseudomonas syringae pv. syringae B728a]
gi|71556224|gb|AAZ35435.1| ribosomal protein S11 [Pseudomonas syringae pv. phaseolicola 1448A]
gi|77385281|gb|ABA76794.1| 30S ribosomal protein S11 [Pseudomonas fluorescens Pf0-1]
gi|213925915|gb|EEB59472.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tomato T1]
gi|229364746|emb|CAY52727.1| 30S ribosomal protein S11 [Pseudomonas fluorescens SBW25]
gi|298156385|gb|EFH97483.1| SSU ribosomal protein S11p (S14e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|310941663|dbj|BAJ24185.1| 30S ribosomal protein S11 [Pseudomonas fluorescens]
gi|310941753|dbj|BAJ24230.1| 30S ribosomal protein S11 [Pseudomonas azotoformans]
gi|310941933|dbj|BAJ24320.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941963|dbj|BAJ24335.1| 30S ribosomal protein S11 [Pseudomonas fluorescens]
gi|320322299|gb|EFW78393.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331957|gb|EFW87893.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|327380161|gb|AEA71511.1| 30S ribosomal protein S11 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|330869408|gb|EGH04117.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330879398|gb|EGH13547.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330879419|gb|EGH13568.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330899713|gb|EGH31132.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330940913|gb|EGH43864.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. pisi str.
1704B]
gi|330962502|gb|EGH62762.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330966888|gb|EGH67148.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330969798|gb|EGH69864.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330976663|gb|EGH76706.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330988259|gb|EGH86362.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331012436|gb|EGH92492.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331018183|gb|EGH98239.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. lachrymans str.
M302278PT]
gi|331020305|gb|EGI00362.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 129
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNGCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|15965132|ref|NP_385485.1| 30S ribosomal protein S11 [Sinorhizobium meliloti 1021]
gi|150396230|ref|YP_001326697.1| 30S ribosomal protein S11 [Sinorhizobium medicae WSM419]
gi|227821778|ref|YP_002825748.1| 30S ribosomal protein S11 [Sinorhizobium fredii NGR234]
gi|307314382|ref|ZP_07593988.1| 30S ribosomal protein S11 [Sinorhizobium meliloti BL225C]
gi|307322094|ref|ZP_07601470.1| 30S ribosomal protein S11 [Sinorhizobium meliloti AK83]
gi|29337192|sp|Q925W7|RS11_RHIME RecName: Full=30S ribosomal protein S11
gi|166231835|sp|A6U882|RS11_SINMW RecName: Full=30S ribosomal protein S11
gi|254811038|sp|C3MB02|RS11_RHISN RecName: Full=30S ribosomal protein S11
gi|15074312|emb|CAC45958.1| Probable 30S ribosomal protein S11 [Sinorhizobium meliloti 1021]
gi|16588801|gb|AAL26900.1| ribosomal protein S11 [Sinorhizobium meliloti]
gi|150027745|gb|ABR59862.1| ribosomal protein S11 [Sinorhizobium medicae WSM419]
gi|227340777|gb|ACP24995.1| 30S ribosomal protein S11 [Sinorhizobium fredii NGR234]
gi|306892276|gb|EFN23086.1| 30S ribosomal protein S11 [Sinorhizobium meliloti AK83]
gi|306899080|gb|EFN29722.1| 30S ribosomal protein S11 [Sinorhizobium meliloti BL225C]
Length = 129
Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNITSGVAHVNSSFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|114570322|ref|YP_757002.1| 30S ribosomal protein S11 [Maricaulis maris MCS10]
gi|122315804|sp|Q0ANS3|RS11_MARMM RecName: Full=30S ribosomal protein S11
gi|114340784|gb|ABI66064.1| SSU ribosomal protein S11P [Maricaulis maris MCS10]
Length = 129
Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R++ RERKNI SG AHV ++FNNT +TITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKDTGRVKRRERKNITSGVAHVSASFNNTMVTITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HGM ++EVKVSG G+GR+SALRAL+++GFTI +I DVT I HNG
Sbjct: 61 YAAQMAAEDAGKKAMEHGMKTIEVKVSGPGSGRESALRALQSVGFTITTIQDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|330891909|gb|EGH24570.1| 30S ribosomal protein S11 [Pseudomonas syringae pv. mori str.
301020]
Length = 129
Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNGCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|329850230|ref|ZP_08265075.1| 30S ribosomal protein S11 [Asticcacaulis biprosthecum C19]
gi|328840545|gb|EGF90116.1| 30S ribosomal protein S11 [Asticcacaulis biprosthecum C19]
Length = 129
Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K SR++ RERKNI SG AHV ++FNNT ITITD GN ++WSS +GF GSRK++P
Sbjct: 1 MAKDTSRVKKRERKNITSGVAHVNASFNNTMITITDAQGNAVSWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HG+ +LEV V+G G+GR+SALRAL+A+GFTI +I DVT I HNG
Sbjct: 61 YAAQVAAEDAGKKAIEHGVKTLEVSVAGPGSGRESALRALQAVGFTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|146281193|ref|YP_001171346.1| 30S ribosomal protein S11 [Pseudomonas stutzeri A1501]
gi|152060810|sp|A4VHQ3|RS11_PSEU5 RecName: Full=30S ribosomal protein S11
gi|145569398|gb|ABP78504.1| 30S ribosomal protein S11 [Pseudomonas stutzeri A1501]
gi|310941903|dbj|BAJ24305.1| 30S ribosomal protein S11 [Pseudomonas stutzeri]
gi|327479346|gb|AEA82656.1| 30S ribosomal protein S11 [Pseudomonas stutzeri DSM 4166]
Length = 129
Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + A +G+ +L+V V G G GR+SA+RAL A G+ I SI DVT I HNG
Sbjct: 61 FAAQIAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|26987218|ref|NP_742643.1| 30S ribosomal protein S11 [Pseudomonas putida KT2440]
gi|104779778|ref|YP_606276.1| 30S ribosomal protein S11 [Pseudomonas entomophila L48]
gi|148545762|ref|YP_001265864.1| 30S ribosomal protein S11 [Pseudomonas putida F1]
gi|170723883|ref|YP_001751571.1| 30S ribosomal protein S11 [Pseudomonas putida W619]
gi|325272031|ref|ZP_08138474.1| 30S ribosomal protein S11 [Pseudomonas sp. TJI-51]
gi|29337188|sp|P59374|RS11_PSEPK RecName: Full=30S ribosomal protein S11
gi|123079275|sp|Q1IFU3|RS11_PSEE4 RecName: Full=30S ribosomal protein S11
gi|166231825|sp|A5VXS0|RS11_PSEP1 RecName: Full=30S ribosomal protein S11
gi|226708404|sp|B1JAI9|RS11_PSEPW RecName: Full=30S ribosomal protein S11
gi|24981857|gb|AAN66107.1|AE016239_2 ribosomal protein S11 [Pseudomonas putida KT2440]
gi|95108765|emb|CAK13459.1| 30S ribosomal protein S11 [Pseudomonas entomophila L48]
gi|148509820|gb|ABQ76680.1| SSU ribosomal protein S11P [Pseudomonas putida F1]
gi|169761886|gb|ACA75202.1| ribosomal protein S11 [Pseudomonas putida W619]
gi|310940982|dbj|BAJ24365.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941012|dbj|BAJ24380.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941042|dbj|BAJ24395.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941072|dbj|BAJ24410.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941102|dbj|BAJ24425.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941633|dbj|BAJ24170.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|310941813|dbj|BAJ24260.1| 30S ribosomal protein S11 [Pseudomonas fulva]
gi|310941993|dbj|BAJ24350.1| 30S ribosomal protein S11 [Pseudomonas putida]
gi|313496842|gb|ADR58208.1| 30S ribosomal protein S11 [Pseudomonas putida BIRD-1]
gi|324102835|gb|EGC00239.1| 30S ribosomal protein S11 [Pseudomonas sp. TJI-51]
Length = 129
Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + A +G+ +L+V V G G GR+SA+RAL + G+ I SI DVT I HNG
Sbjct: 61 FAAQIAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNSCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|170748611|ref|YP_001754871.1| ribosomal protein S11 [Methylobacterium radiotolerans JCM 2831]
gi|226708386|sp|B1LWQ1|RS11_METRJ RecName: Full=30S ribosomal protein S11
gi|170655133|gb|ACB24188.1| ribosomal protein S11 [Methylobacterium radiotolerans JCM 2831]
Length = 129
Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R+R RERKNIVSG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEPQRVRRRERKNIVSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTSIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|308048014|ref|YP_003911580.1| 30S ribosomal protein S11P [Ferrimonas balearica DSM 9799]
gi|307630204|gb|ADN74506.1| SSU ribosomal protein S11P [Ferrimonas balearica DSM 9799]
Length = 129
Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+PSR R + RK + G AHV ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPSRTRKKVRKQVADGIAHVHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ A+ +G+ +LEV+V G G GR+S++RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEIAKEYGLKNLEVEVKGPGPGRESSIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|298291461|ref|YP_003693400.1| 30S ribosomal protein S11 [Starkeya novella DSM 506]
gi|296927972|gb|ADH88781.1| 30S ribosomal protein S11 [Starkeya novella DSM 506]
Length = 129
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RI+ RERKNI SG AHV ++FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MAKEAARIKRRERKNIASGVAHVNASFNNTMITITDAQGNTIAWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +DC+ KA HGM ++EV+VSG G+GR+SALRA +A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDCARKASEHGMRTIEVEVSGPGSGRESALRAFQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|197104719|ref|YP_002130096.1| ribosomal protein S11 [Phenylobacterium zucineum HLK1]
gi|226708395|sp|B4R8P0|RS11_PHEZH RecName: Full=30S ribosomal protein S11
gi|196478139|gb|ACG77667.1| ribosomal protein S11 [Phenylobacterium zucineum HLK1]
Length = 129
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R++ RERKNI SG AHV ++FNNT +TITD GNTI+WSS ++GF GSRK++P
Sbjct: 1 MAKEPARVKRRERKNITSGVAHVNASFNNTMVTITDAQGNTISWSSAGLMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV VSG G+GR+SALRAL+A+G TI +I DVT I HNG
Sbjct: 61 YAAQMAAEDAGRKAAEHGVRTLEVNVSGPGSGRESALRALQAVGMTITTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|70732861|ref|YP_262628.1| 30S ribosomal protein S11 [Pseudomonas fluorescens Pf-5]
gi|91207670|sp|Q4K555|RS11_PSEF5 RecName: Full=30S ribosomal protein S11
gi|68347160|gb|AAY94766.1| ribosomal protein S11 [Pseudomonas fluorescens Pf-5]
gi|310941783|dbj|BAJ24245.1| 30S ribosomal protein S11 [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 129
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKIKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNGCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|23012205|ref|ZP_00052349.1| COG0100: Ribosomal protein S11 [Magnetospirillum magnetotacticum
MS-1]
gi|188581393|ref|YP_001924838.1| 30S ribosomal protein S11 [Methylobacterium populi BJ001]
gi|226708385|sp|B1Z770|RS11_METPB RecName: Full=30S ribosomal protein S11
gi|179344891|gb|ACB80303.1| ribosomal protein S11 [Methylobacterium populi BJ001]
Length = 129
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R+R RERKNIVSG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEPTRVRRRERKNIVSGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTSIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|89093592|ref|ZP_01166540.1| 30S ribosomal protein S11 [Oceanospirillum sp. MED92]
gi|89082282|gb|EAR61506.1| 30S ribosomal protein S11 [Oceanospirillum sp. MED92]
Length = 129
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K I G AH+ ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPGNRTRKKVKKQIADGFAHIHASFNNTIITITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL A+G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVFVKGPGPGRESAVRALNAVGYKIANITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|167031522|ref|YP_001666753.1| 30S ribosomal protein S11 [Pseudomonas putida GB-1]
gi|189040427|sp|B0KK89|RS11_PSEPG RecName: Full=30S ribosomal protein S11
gi|166858010|gb|ABY96417.1| ribosomal protein S11 [Pseudomonas putida GB-1]
Length = 129
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARPRKKIKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + A +G+ +L+V V G G GR+SA+RAL + G+ I SI DVT I HNG
Sbjct: 61 FAAQIAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNSCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|329889150|ref|ZP_08267493.1| 30S ribosomal protein S11 [Brevundimonas diminuta ATCC 11568]
gi|328844451|gb|EGF94015.1| 30S ribosomal protein S11 [Brevundimonas diminuta ATCC 11568]
Length = 129
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R++ RERKNI SG AHV ++FNNT +TITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEPGRVKRRERKNITSGVAHVNASFNNTMVTITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV VSG G+GR+SALRAL+A+G TI +I DVT + HNG
Sbjct: 61 YAAQMAAEDAGKKAAEHGVKTLEVNVSGPGSGRESALRALQAVGMTITTIRDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|83858543|ref|ZP_00952065.1| 30S ribosomal protein S11 [Oceanicaulis alexandrii HTCC2633]
gi|83853366|gb|EAP91218.1| 30S ribosomal protein S11 [Oceanicaulis alexandrii HTCC2633]
Length = 129
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/129 (65%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K PSR+R RERKNI +G AHV ++FNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKEPSRVRRRERKNITAGVAHVNASFNNTMITITDAQGNAISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KAQ HG+ +LEVKVSG G+GR+SALRAL+++GFTI +I DVT I HNG
Sbjct: 61 YAAQVAAEDAGRKAQEHGVKTLEVKVSGPGSGRESALRALQSVGFTITTIHDVTSIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|239636208|ref|ZP_04677212.1| 30S ribosomal protein S11 [Staphylococcus warneri L37603]
gi|239598224|gb|EEQ80717.1| 30S ribosomal protein S11 [Staphylococcus warneri L37603]
gi|330685130|gb|EGG96794.1| 30S ribosomal protein S11 [Staphylococcus epidermidis VCU121]
Length = 129
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + +KNI SG AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRKVKKNIESGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ ++EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKTAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|88799196|ref|ZP_01114776.1| Ribosomal protein S11 [Reinekea sp. MED297]
gi|88778179|gb|EAR09374.1| Ribosomal protein S11 [Reinekea sp. MED297]
Length = 129
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ R + +K + G AH+ ++FNNT +TITD GNT++W++ GF GSRK++P
Sbjct: 1 MAKPGTKSRKKVKKQVADGIAHIHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + AQ +G+ +L+V+V G G GR+SA+RAL A+G+ I +I DVT I HNG
Sbjct: 61 FAAQIAAERAGTAAQEYGLKNLDVEVKGPGPGRESAVRALNAVGYRISNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|319893175|ref|YP_004150050.1| SSU ribosomal protein S11p (S14e) [Staphylococcus pseudintermedius
HKU10-03]
gi|317162871|gb|ADV06414.1| SSU ribosomal protein S11p (S14e) [Staphylococcus pseudintermedius
HKU10-03]
gi|323463777|gb|ADX75930.1| ribosomal protein S11 [Staphylococcus pseudintermedius ED99]
Length = 129
Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ S+EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKAAMEHGLKSVEVTVKGPGPGRESAIRALQSAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|310941873|dbj|BAJ24290.1| 30S ribosomal protein S11 [Pseudomonas straminea]
Length = 129
Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAARTRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNGCGYKIASITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPSKKRRV 129
>gi|56460993|ref|YP_156274.1| 30S ribosomal protein S11 [Idiomarina loihiensis L2TR]
gi|62287389|sp|Q5QXV6|RS11_IDILO RecName: Full=30S ribosomal protein S11
gi|56180003|gb|AAV82725.1| Ribosomal protein S11 [Idiomarina loihiensis L2TR]
Length = 129
Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R R R +K + G AHV ++FNNT ITITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPTRSRKRVKKQVADGMAHVHASFNNTIITITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +LEV V+G G GR+S++RAL A+G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEMAKEYGLKNLEVFVNGPGPGRESSIRALNAVGYKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|117620332|ref|YP_854865.1| 30S ribosomal protein S11 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|145300912|ref|YP_001143753.1| 30S ribosomal protein S11 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|152060569|sp|A0KF43|RS11_AERHH RecName: Full=30S ribosomal protein S11
gi|152060570|sp|A4SSY3|RS11_AERS4 RecName: Full=30S ribosomal protein S11
gi|117561739|gb|ABK38687.1| ribosomal protein S11 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|142853684|gb|ABO92005.1| ribosomal protein S11 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 129
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R R R +K + G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTPTRARKRVKKQVSDGIAHVHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +LEV V G G GR+S++RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEIAKEYGVKNLEVMVKGPGPGRESSIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|82701923|ref|YP_411489.1| 30S ribosomal protein S11 [Nitrosospira multiformis ATCC 25196]
gi|91207661|sp|Q2YAX4|RS11_NITMU RecName: Full=30S ribosomal protein S11
gi|82409988|gb|ABB74097.1| SSU ribosomal protein S11P [Nitrosospira multiformis ATCC 25196]
Length = 129
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +R+R + +KN+ G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MVKAATRVRKKVKKNVAEGIAHVHASFNNTIVTITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV++ G G GR+SA+RAL A GF I SI DVT + HNG
Sbjct: 61 FAAQVAAEQAGRAAQEYGVKNLEVRIKGPGPGRESAVRALNAAGFKITSISDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|73661997|ref|YP_300778.1| 30S ribosomal protein S11 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82581614|sp|Q49ZE3|RS11_STAS1 RecName: Full=30S ribosomal protein S11
gi|72494512|dbj|BAE17833.1| 30S ribosomal protein S11 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 129
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ S+EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKTAMEHGLKSVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|15925215|ref|NP_372749.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927805|ref|NP_375338.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
N315]
gi|21283873|ref|NP_646961.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus MW2]
gi|49484441|ref|YP_041665.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49487007|ref|YP_044228.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650809|ref|YP_187024.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus COL]
gi|70725828|ref|YP_252742.1| 30S ribosomal protein S11 [Staphylococcus haemolyticus JCSC1435]
gi|82751815|ref|YP_417556.1| 30S ribosomal protein S11 [Staphylococcus aureus RF122]
gi|87162098|ref|YP_494814.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196137|ref|YP_500954.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148268665|ref|YP_001247608.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus JH9]
gi|150394730|ref|YP_001317405.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus JH1]
gi|151222339|ref|YP_001333161.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980540|ref|YP_001442799.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus Mu3]
gi|161510429|ref|YP_001576088.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140173|ref|ZP_03564666.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|223042606|ref|ZP_03612655.1| 30S ribosomal protein S11 [Staphylococcus capitis SK14]
gi|228474577|ref|ZP_04059308.1| 30S ribosomal protein S11 [Staphylococcus hominis SK119]
gi|242371872|ref|ZP_04817446.1| 30S ribosomal protein S11 [Staphylococcus epidermidis M23864:W1]
gi|253316986|ref|ZP_04840199.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253729891|ref|ZP_04864056.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734366|ref|ZP_04868531.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007005|ref|ZP_05145606.2| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257423710|ref|ZP_05600139.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426388|ref|ZP_05602790.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429028|ref|ZP_05605415.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus 68-397]
gi|257431674|ref|ZP_05608037.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus E1410]
gi|257434634|ref|ZP_05610685.1| SSU ribosomal protein S11 [Staphylococcus aureus subsp. aureus
M876]
gi|257794571|ref|ZP_05643550.1| 30S ribosomal protein S11 [Staphylococcus aureus A9781]
gi|258408827|ref|ZP_05681111.1| 30S ribosomal protein S11 [Staphylococcus aureus A9763]
gi|258422426|ref|ZP_05685338.1| SSU ribosomal protein S11 [Staphylococcus aureus A9719]
gi|258422672|ref|ZP_05685577.1| SSU ribosomal protein S11 [Staphylococcus aureus A9635]
gi|258439814|ref|ZP_05690560.1| 30S ribosomal protein S11 [Staphylococcus aureus A9299]
gi|258442630|ref|ZP_05691190.1| ribosomal protein S11 [Staphylococcus aureus A8115]
gi|258446672|ref|ZP_05694827.1| 30S ribosomal protein S11 [Staphylococcus aureus A6300]
gi|258450210|ref|ZP_05698302.1| ribosomal protein S11 [Staphylococcus aureus A6224]
gi|258450779|ref|ZP_05698838.1| 30S ribosomal protein S11 [Staphylococcus aureus A5948]
gi|258455418|ref|ZP_05703378.1| 30S ribosomal protein S11 [Staphylococcus aureus A5937]
gi|262048493|ref|ZP_06021377.1| 30S ribosomal protein S11 [Staphylococcus aureus D30]
gi|262052018|ref|ZP_06024229.1| 30S ribosomal protein S11 [Staphylococcus aureus 930918-3]
gi|269203858|ref|YP_003283127.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893664|ref|ZP_06301896.1| 30S ribosomal protein S11 [Staphylococcus aureus A8117]
gi|282902128|ref|ZP_06310021.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C160]
gi|282906568|ref|ZP_06314416.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909538|ref|ZP_06317349.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911786|ref|ZP_06319582.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915074|ref|ZP_06322851.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus M899]
gi|282917570|ref|ZP_06325322.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
D139]
gi|282920800|ref|ZP_06328518.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C427]
gi|282922094|ref|ZP_06329790.1| 30S ribosomal protein S11 [Staphylococcus aureus A9765]
gi|282925705|ref|ZP_06333353.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C101]
gi|282926771|ref|ZP_06334398.1| 30S ribosomal protein S11 [Staphylococcus aureus A10102]
gi|283767317|ref|ZP_06340232.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus H19]
gi|283959003|ref|ZP_06376444.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284025251|ref|ZP_06379649.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus 132]
gi|289550168|ref|YP_003471072.1| SSU ribosomal protein S11p (S14e) [Staphylococcus lugdunensis
HKU09-01]
gi|293497478|ref|ZP_06665332.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
58-424]
gi|293511053|ref|ZP_06669750.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
M809]
gi|293549659|ref|ZP_06672331.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus M1015]
gi|294848758|ref|ZP_06789503.1| 30S ribosomal protein S11 [Staphylococcus aureus A9754]
gi|295404901|ref|ZP_06814714.1| 30S ribosomal protein S11 [Staphylococcus aureus A8819]
gi|295428808|ref|ZP_06821432.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275984|ref|ZP_06858491.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus MR1]
gi|297209962|ref|ZP_06926358.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297243959|ref|ZP_06927849.1| 30S ribosomal protein S11 [Staphylococcus aureus A8796]
gi|297589706|ref|ZP_06948347.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus MN8]
gi|300910974|ref|ZP_07128424.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379409|ref|ZP_07362144.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|314934273|ref|ZP_07841632.1| 30S ribosomal protein S11 [Staphylococcus caprae C87]
gi|314935856|ref|ZP_07843208.1| 30S ribosomal protein S11 [Staphylococcus hominis subsp. hominis
C80]
gi|315659202|ref|ZP_07912066.1| 30S ribosomal protein S11 [Staphylococcus lugdunensis M23590]
gi|54039333|sp|P66357|RS11_STAAN RecName: Full=30S ribosomal protein S11
gi|54039334|sp|P66358|RS11_STAAW RecName: Full=30S ribosomal protein S11
gi|54042110|sp|P66356|RS11_STAAM RecName: Full=30S ribosomal protein S11
gi|56749505|sp|Q6G796|RS11_STAAS RecName: Full=30S ribosomal protein S11
gi|56749552|sp|Q6GEK8|RS11_STAAR RecName: Full=30S ribosomal protein S11
gi|62287348|sp|Q5HDY3|RS11_STAAC RecName: Full=30S ribosomal protein S11
gi|82581613|sp|Q4L889|RS11_STAHJ RecName: Full=30S ribosomal protein S11
gi|91207680|sp|Q2YYM1|RS11_STAAB RecName: Full=30S ribosomal protein S11
gi|123003433|sp|Q2FW31|RS11_STAA8 RecName: Full=30S ribosomal protein S11
gi|123749580|sp|Q2FER4|RS11_STAA3 RecName: Full=30S ribosomal protein S11
gi|166231837|sp|A7X5C5|RS11_STAA1 RecName: Full=30S ribosomal protein S11
gi|172049006|sp|A6QJ67|RS11_STAAE RecName: Full=30S ribosomal protein S11
gi|189040439|sp|A6U3V0|RS11_STAA2 RecName: Full=30S ribosomal protein S11
gi|189040440|sp|A5IV09|RS11_STAA9 RecName: Full=30S ribosomal protein S11
gi|189040441|sp|A8Z332|RS11_STAAT RecName: Full=30S ribosomal protein S11
gi|13702025|dbj|BAB43317.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
N315]
gi|14247998|dbj|BAB58387.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21205315|dbj|BAB96009.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus MW2]
gi|49242570|emb|CAG41291.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245450|emb|CAG43927.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284995|gb|AAW37089.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus COL]
gi|68446552|dbj|BAE04136.1| 30S ribosomal protein S11 [Staphylococcus haemolyticus JCSC1435]
gi|82657346|emb|CAI81787.1| 30S ribosomal protein S11 [Staphylococcus aureus RF122]
gi|87128072|gb|ABD22586.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203695|gb|ABD31505.1| ribosomal protein S11, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147741734|gb|ABQ50032.1| SSU ribosomal protein S11P [Staphylococcus aureus subsp. aureus
JH9]
gi|149947182|gb|ABR53118.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus JH1]
gi|150375139|dbj|BAF68399.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722675|dbj|BAF79092.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus Mu3]
gi|160369238|gb|ABX30209.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|222444269|gb|EEE50365.1| 30S ribosomal protein S11 [Staphylococcus capitis SK14]
gi|228271240|gb|EEK12608.1| 30S ribosomal protein S11 [Staphylococcus hominis SK119]
gi|242350379|gb|EES41980.1| 30S ribosomal protein S11 [Staphylococcus epidermidis M23864:W1]
gi|253726338|gb|EES95067.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727683|gb|EES96412.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272728|gb|EEV04830.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276019|gb|EEV07470.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279509|gb|EEV10096.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus 68-397]
gi|257282553|gb|EEV12685.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus E1410]
gi|257285230|gb|EEV15346.1| SSU ribosomal protein S11 [Staphylococcus aureus subsp. aureus
M876]
gi|257788543|gb|EEV26883.1| 30S ribosomal protein S11 [Staphylococcus aureus A9781]
gi|257840510|gb|EEV64970.1| 30S ribosomal protein S11 [Staphylococcus aureus A9763]
gi|257841857|gb|EEV66294.1| SSU ribosomal protein S11 [Staphylococcus aureus A9719]
gi|257847083|gb|EEV71092.1| SSU ribosomal protein S11 [Staphylococcus aureus A9635]
gi|257847590|gb|EEV71592.1| 30S ribosomal protein S11 [Staphylococcus aureus A9299]
gi|257851751|gb|EEV75685.1| ribosomal protein S11 [Staphylococcus aureus A8115]
gi|257854740|gb|EEV77688.1| 30S ribosomal protein S11 [Staphylococcus aureus A6300]
gi|257856302|gb|EEV79211.1| ribosomal protein S11 [Staphylococcus aureus A6224]
gi|257861562|gb|EEV84364.1| 30S ribosomal protein S11 [Staphylococcus aureus A5948]
gi|257862629|gb|EEV85397.1| 30S ribosomal protein S11 [Staphylococcus aureus A5937]
gi|259160073|gb|EEW45106.1| 30S ribosomal protein S11 [Staphylococcus aureus 930918-3]
gi|259163351|gb|EEW47909.1| 30S ribosomal protein S11 [Staphylococcus aureus D30]
gi|262076148|gb|ACY12121.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941814|emb|CBI50224.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TW20]
gi|282312534|gb|EFB42938.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C101]
gi|282315215|gb|EFB45599.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C427]
gi|282318532|gb|EFB48890.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
D139]
gi|282320795|gb|EFB51129.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus M899]
gi|282323482|gb|EFB53798.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326517|gb|EFB56819.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329467|gb|EFB58988.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282591222|gb|EFB96295.1| 30S ribosomal protein S11 [Staphylococcus aureus A10102]
gi|282593562|gb|EFB98555.1| 30S ribosomal protein S11 [Staphylococcus aureus A9765]
gi|282596587|gb|EFC01546.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
C160]
gi|282763722|gb|EFC03850.1| 30S ribosomal protein S11 [Staphylococcus aureus A8117]
gi|283461196|gb|EFC08280.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus H19]
gi|283471447|emb|CAQ50658.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus ST398]
gi|283788595|gb|EFC27422.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817887|gb|ADC38374.1| 30S ribosomal protein S11 [Staphylococcus aureus 04-02981]
gi|289179700|gb|ADC86945.1| SSU ribosomal protein S11p (S14e) [Staphylococcus lugdunensis
HKU09-01]
gi|290918706|gb|EFD95782.1| ribosomal protein S11 [Staphylococcus aureus subsp. aureus M1015]
gi|291096409|gb|EFE26667.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466040|gb|EFF08569.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
M809]
gi|294824137|gb|EFG40561.1| 30S ribosomal protein S11 [Staphylococcus aureus A9754]
gi|294969846|gb|EFG45864.1| 30S ribosomal protein S11 [Staphylococcus aureus A8819]
gi|295127157|gb|EFG56799.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885635|gb|EFH24572.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297178737|gb|EFH37982.1| 30S ribosomal protein S11 [Staphylococcus aureus A8796]
gi|297578217|gb|EFH96930.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus MN8]
gi|298695482|gb|ADI98704.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
ED133]
gi|300887954|gb|EFK83149.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302333861|gb|ADL24054.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752098|gb|ADL66275.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304341941|gb|EFM07845.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437364|gb|ADQ76435.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312830574|emb|CBX35416.1| 30S ribosomal protein S11 (BS11) [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|313652203|gb|EFS15966.1| 30S ribosomal protein S11 [Staphylococcus caprae C87]
gi|313656421|gb|EFS20161.1| 30S ribosomal protein S11 [Staphylococcus hominis subsp. hominis
C80]
gi|315129695|gb|EFT85686.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193477|gb|EFU23873.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198245|gb|EFU28576.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
CGS01]
gi|315495627|gb|EFU83958.1| 30S ribosomal protein S11 [Staphylococcus lugdunensis M23590]
gi|320140237|gb|EFW32096.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143507|gb|EFW35288.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440095|gb|EGA97810.1| 30S ribosomal protein S11 [Staphylococcus aureus O11]
gi|323442769|gb|EGB00395.1| 30S ribosomal protein S11 [Staphylococcus aureus O46]
gi|329314908|gb|AEB89321.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
T0131]
gi|329723548|gb|EGG60077.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
21172]
gi|329730336|gb|EGG66726.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
21193]
gi|329732000|gb|EGG68355.1| 30S ribosomal protein S11 [Staphylococcus aureus subsp. aureus
21189]
Length = 129
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ ++EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|224477195|ref|YP_002634801.1| 30S ribosomal protein S11 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254811043|sp|B9DM52|RS11_STACT RecName: Full=30S ribosomal protein S11
gi|222421802|emb|CAL28616.1| 30S ribosomal protein S11 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 129
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KN+ +G AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRRVKKNVENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ S+EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKTAMEHGLKSVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|295398313|ref|ZP_06808355.1| 30S ribosomal protein S11 [Aerococcus viridans ATCC 11563]
gi|294973452|gb|EFG49237.1| 30S ribosomal protein S11 [Aerococcus viridans ATCC 11563]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P + R +KN+ +G AH+ STFNNT + ITD HGN I+WSS +GF GSRK++P
Sbjct: 1 MAKRPVSRKRRVKKNVETGVAHIHSTFNNTIVMITDEHGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A++ + A +HGM S+EV V G G+GR+SA+RAL+A G + +I DVT I HNG
Sbjct: 61 YAAQMASETATKAAMDHGMKSVEVSVKGPGSGRESAIRALQAAGLEVTAIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|167855327|ref|ZP_02478095.1| 50S ribosomal protein L17 [Haemophilus parasuis 29755]
gi|219871573|ref|YP_002475948.1| 30S ribosomal protein S11 [Haemophilus parasuis SH0165]
gi|254765386|sp|B8F6P8|RS11_HAEPS RecName: Full=30S ribosomal protein S11
gi|167853585|gb|EDS24831.1| 50S ribosomal protein L17 [Haemophilus parasuis 29755]
gi|219691777|gb|ACL33000.1| 30S ribosomal protein S11 [Haemophilus parasuis SH0165]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K IV G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQIVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|163796896|ref|ZP_02190853.1| Ribosomal protein S11 [alpha proteobacterium BAL199]
gi|159177885|gb|EDP62434.1| Ribosomal protein S11 [alpha proteobacterium BAL199]
Length = 131
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 83/131 (63%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K P+ R+R RE+KNI SG AHV+++FNNT ITITD GN I+WSS +GF GSRK+
Sbjct: 1 MAKQPTQARVRRREKKNITSGVAHVMASFNNTMITITDAQGNAISWSSAGTMGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQVA +D KA HGM +LEV+VSG G+GR+SALRAL+A+GF + SI DVT I H
Sbjct: 61 TPYAAQVAAEDAGRKATEHGMKTLEVEVSGPGSGRESALRALQAVGFHVTSIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRPRKRRR+
Sbjct: 121 NGCRPRKRRRV 131
>gi|113460231|ref|YP_718289.1| 30S ribosomal protein S11 [Haemophilus somnus 129PT]
gi|123327086|sp|Q0I139|RS11_HAES1 RecName: Full=30S ribosomal protein S11
gi|112822274|gb|ABI24363.1| SSU ribosomal protein S11P [Haemophilus somnus 129PT]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRTRKRVKKQVVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEVVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|237806898|ref|YP_002891338.1| 30S ribosomal protein S11 [Tolumonas auensis DSM 9187]
gi|259494639|sp|C4L7V3|RS11_TOLAT RecName: Full=30S ribosomal protein S11
gi|237499159|gb|ACQ91752.1| ribosomal protein S11 [Tolumonas auensis DSM 9187]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R R R RK + G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKAPTRARKRVRKQVSDGIAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +LEV V G G GR+S++RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEIAKEYGVKNLEVMVKGPGPGRESSIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|152978164|ref|YP_001343793.1| 30S ribosomal protein S11 [Actinobacillus succinogenes 130Z]
gi|171704197|sp|A6VLL1|RS11_ACTSZ RecName: Full=30S ribosomal protein S11
gi|150839887|gb|ABR73858.1| ribosomal protein S11 [Actinobacillus succinogenes 130Z]
gi|330432101|gb|AEC17160.1| 30S ribosomal protein S11 [Gallibacterium anatis UMN179]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|261867277|ref|YP_003255199.1| 30S ribosomal protein S11 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412609|gb|ACX81980.1| 30S ribosomal protein S11 [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 129
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVAHIHASFNNTIVTITDRQGNVLAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEIVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|71278557|ref|YP_267374.1| 30S ribosomal protein S11 [Colwellia psychrerythraea 34H]
gi|91207738|sp|Q488Z0|RS11_COLP3 RecName: Full=30S ribosomal protein S11
gi|71144297|gb|AAZ24770.1| ribosomal protein S11 [Colwellia psychrerythraea 34H]
Length = 129
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K + G AH+ ++FNNT +T+TD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTPVRTRKRVKKQVADGMAHIHASFNNTIVTLTDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA D A A+ G+ ++EV V G G GR+SA+RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAADRAGAVAKEFGLKNIEVFVKGPGPGRESAIRALNAAGFKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|27468716|ref|NP_765353.1| 30S ribosomal protein S11 [Staphylococcus epidermidis ATCC 12228]
gi|57867676|ref|YP_189369.1| 30S ribosomal protein S11 [Staphylococcus epidermidis RP62A]
gi|242243972|ref|ZP_04798415.1| ribosomal protein S11 [Staphylococcus epidermidis W23144]
gi|251812072|ref|ZP_04826545.1| ribosomal protein S11 [Staphylococcus epidermidis BCM-HMP0060]
gi|282875367|ref|ZP_06284240.1| 30S ribosomal protein S11 [Staphylococcus epidermidis SK135]
gi|293368458|ref|ZP_06615082.1| 30S ribosomal protein S11 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|34582665|sp|P59377|RS11_STAES RecName: Full=30S ribosomal protein S11
gi|81673642|sp|Q5HM24|RS11_STAEQ RecName: Full=30S ribosomal protein S11
gi|27316264|gb|AAO05439.1|AE016750_44 30S ribosomal protein S11 [Staphylococcus epidermidis ATCC 12228]
gi|57638334|gb|AAW55122.1| ribosomal protein S11 [Staphylococcus epidermidis RP62A]
gi|242232605|gb|EES34917.1| ribosomal protein S11 [Staphylococcus epidermidis W23144]
gi|251804406|gb|EES57063.1| ribosomal protein S11 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296132|gb|EFA88653.1| 30S ribosomal protein S11 [Staphylococcus epidermidis SK135]
gi|291317416|gb|EFE57838.1| 30S ribosomal protein S11 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319400600|gb|EFV88825.1| 30S ribosomal protein S11 [Staphylococcus epidermidis FRI909]
gi|329731272|gb|EGG67642.1| 30S ribosomal protein S11 [Staphylococcus epidermidis VCU144]
gi|329736442|gb|EGG72710.1| 30S ribosomal protein S11 [Staphylococcus epidermidis VCU028]
gi|329737051|gb|EGG73306.1| 30S ribosomal protein S11 [Staphylococcus epidermidis VCU045]
Length = 129
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITD GN ++WSS +GF GS+K++P
Sbjct: 1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ ++EV V G G GR+SA+RAL++ G + +I DVT + HNG
Sbjct: 61 FAAQMASETASKTAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|253995742|ref|YP_003047806.1| 30S ribosomal protein S11 [Methylotenera mobilis JLW8]
gi|297537554|ref|YP_003673323.1| 30S ribosomal protein S11 [Methylotenera sp. 301]
gi|253982421|gb|ACT47279.1| ribosomal protein S11 [Methylotenera mobilis JLW8]
gi|297256901|gb|ADI28746.1| 30S ribosomal protein S11 [Methylotenera sp. 301]
Length = 129
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ R+R + +KNI G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKANVRVRKKVKKNIAEGIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV++ G G GR+SA+RAL A GF I SI DVT + HNG
Sbjct: 61 FAAQVAAEVAGKSAQENGVKNLEVRIKGPGPGRESAVRALNAAGFKITSITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|52426080|ref|YP_089217.1| 30S ribosomal protein S11 [Mannheimia succiniciproducens MBEL55E]
gi|59798653|sp|Q65QX8|RS11_MANSM RecName: Full=30S ribosomal protein S11
gi|52308132|gb|AAU38632.1| RpsK protein [Mannheimia succiniciproducens MBEL55E]
Length = 129
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|15603257|ref|NP_246331.1| 30S ribosomal protein S11 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|170718272|ref|YP_001785290.1| 30S ribosomal protein S11 [Haemophilus somnus 2336]
gi|251793849|ref|YP_003008581.1| 30S ribosomal protein S11 [Aggregatibacter aphrophilus NJ8700]
gi|260914658|ref|ZP_05921124.1| 30S ribosomal protein S11 [Pasteurella dagmatis ATCC 43325]
gi|315633477|ref|ZP_07888767.1| 30S ribosomal protein S11 [Aggregatibacter segnis ATCC 33393]
gi|48474634|sp|Q9CL52|RS11_PASMU RecName: Full=30S ribosomal protein S11
gi|189040418|sp|B0UX37|RS11_HAES2 RecName: Full=30S ribosomal protein S11
gi|12721767|gb|AAK03476.1| RpS11 [Pasteurella multocida subsp. multocida str. Pm70]
gi|168826401|gb|ACA31772.1| ribosomal protein S11 [Haemophilus somnus 2336]
gi|247535248|gb|ACS98494.1| ribosomal protein S11 [Aggregatibacter aphrophilus NJ8700]
gi|260631257|gb|EEX49442.1| 30S ribosomal protein S11 [Pasteurella dagmatis ATCC 43325]
gi|315477519|gb|EFU68261.1| 30S ribosomal protein S11 [Aggregatibacter segnis ATCC 33393]
Length = 129
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEVVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|56551436|ref|YP_162275.1| 30S ribosomal protein S11 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761083|ref|ZP_04759172.1| ribosomal protein S11 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752951|ref|YP_003225844.1| 30S ribosomal protein S11 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|62287378|sp|Q5NQ41|RS11_ZYMMO RecName: Full=30S ribosomal protein S11
gi|56543010|gb|AAV89164.1| ribosomal protein S11 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374702|gb|EER64163.1| ribosomal protein S11 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258552314|gb|ACV75260.1| ribosomal protein S11 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 129
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R++ RERKNI +G AHV ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPQRVKRRERKNISAGVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HG+ +LEV+V G G+GR+SALRAL+A+GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFHITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|322515612|ref|ZP_08068591.1| 30S ribosomal protein S11 [Actinobacillus ureae ATCC 25976]
gi|322118322|gb|EFX90597.1| 30S ribosomal protein S11 [Actinobacillus ureae ATCC 25976]
Length = 129
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K IV G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQIVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|223042026|ref|ZP_03612207.1| 30S ribosomal protein S11 [Actinobacillus minor 202]
gi|240948152|ref|ZP_04752555.1| 30S ribosomal protein S11 [Actinobacillus minor NM305]
gi|254362774|ref|ZP_04978856.1| ribosomal protein S11 [Mannheimia haemolytica PHL213]
gi|261492715|ref|ZP_05989263.1| ribosomal protein S11 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495670|ref|ZP_05992116.1| ribosomal protein S11 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153094403|gb|EDN75252.1| ribosomal protein S11 [Mannheimia haemolytica PHL213]
gi|223017188|gb|EEF15619.1| 30S ribosomal protein S11 [Actinobacillus minor 202]
gi|240297505|gb|EER48012.1| 30S ribosomal protein S11 [Actinobacillus minor NM305]
gi|261308777|gb|EEY10034.1| ribosomal protein S11 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311568|gb|EEY12723.1| ribosomal protein S11 [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 129
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K I G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|15642568|ref|NP_232201.1| 30S ribosomal protein S11 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|27364192|ref|NP_759720.1| 30S ribosomal protein S11 [Vibrio vulnificus CMCP6]
gi|28897054|ref|NP_796659.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus RIMD 2210633]
gi|37678581|ref|NP_933190.1| 30S ribosomal protein S11 [Vibrio vulnificus YJ016]
gi|147673111|ref|YP_001218067.1| 30S ribosomal protein S11 [Vibrio cholerae O395]
gi|149192392|ref|ZP_01870593.1| 30S ribosomal protein S11 [Vibrio shilonii AK1]
gi|153217777|ref|ZP_01951420.1| ribosomal protein S11 [Vibrio cholerae 1587]
gi|153827708|ref|ZP_01980375.1| ribosomal protein S11 [Vibrio cholerae MZO-2]
gi|153840231|ref|ZP_01992898.1| ribosomal protein S11 [Vibrio parahaemolyticus AQ3810]
gi|156973073|ref|YP_001443980.1| 30S ribosomal protein S11 [Vibrio harveyi ATCC BAA-1116]
gi|227082690|ref|YP_002811241.1| ribosomal protein S11 [Vibrio cholerae M66-2]
gi|229507375|ref|ZP_04396880.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae BX 330286]
gi|229509701|ref|ZP_04399182.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae B33]
gi|229513496|ref|ZP_04402960.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae TMA 21]
gi|229516826|ref|ZP_04406272.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae RC9]
gi|229521639|ref|ZP_04411057.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae TM 11079-80]
gi|229524554|ref|ZP_04413959.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae bv. albensis
VL426]
gi|229527497|ref|ZP_04416889.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae 12129(1)]
gi|229606881|ref|YP_002877529.1| 30S ribosomal protein S11 [Vibrio cholerae MJ-1236]
gi|254292240|ref|ZP_04963003.1| ribosomal protein S11 [Vibrio cholerae AM-19226]
gi|254509450|ref|ZP_05121528.1| ribosomal protein S11 [Vibrio parahaemolyticus 16]
gi|254851113|ref|ZP_05240463.1| ribosomal protein S11 [Vibrio cholerae MO10]
gi|255744458|ref|ZP_05418410.1| SSU ribosomal protein S11p (S14e) [Vibrio cholera CIRS 101]
gi|258622735|ref|ZP_05717753.1| 30S ribosomal protein S11 [Vibrio mimicus VM573]
gi|258625763|ref|ZP_05720642.1| 30S ribosomal protein S11 [Vibrio mimicus VM603]
gi|260361370|ref|ZP_05774435.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus K5030]
gi|260770936|ref|ZP_05879865.1| SSU ribosomal protein S11p (S14e) [Vibrio furnissii CIP 102972]
gi|260772119|ref|ZP_05881036.1| SSU ribosomal protein S11p (S14e) [Vibrio metschnikovii CIP 69.14]
gi|260779480|ref|ZP_05888370.1| SSU ribosomal protein S11p (S14e) [Vibrio coralliilyticus ATCC
BAA-450]
gi|260877972|ref|ZP_05890327.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus AN-5034]
gi|260895672|ref|ZP_05904168.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus Peru-466]
gi|260903550|ref|ZP_05911945.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus AQ4037]
gi|261211128|ref|ZP_05925417.1| SSU ribosomal protein S11p (S14e) [Vibrio sp. RC341]
gi|261250394|ref|ZP_05942969.1| SSU ribosomal protein S11p (S14e) [Vibrio orientalis CIP 102891]
gi|262166594|ref|ZP_06034331.1| SSU ribosomal protein S11p (S14e) [Vibrio mimicus VM223]
gi|262170490|ref|ZP_06038168.1| SSU ribosomal protein S11p (S14e) [Vibrio mimicus MB-451]
gi|262392493|ref|YP_003284347.1| 30S ribosomal protein S11p [Vibrio sp. Ex25]
gi|262401860|ref|ZP_06078425.1| SSU ribosomal protein S11p (S14e) [Vibrio sp. RC586]
gi|269959711|ref|ZP_06174091.1| 30S ribosomal protein S11 [Vibrio harveyi 1DA3]
gi|269964714|ref|ZP_06178952.1| 30S ribosomal protein S11 [Vibrio alginolyticus 40B]
gi|297581415|ref|ZP_06943338.1| ribosomal protein S11 [Vibrio cholerae RC385]
gi|298500603|ref|ZP_07010407.1| SSU ribosomal protein S11 [Vibrio cholerae MAK 757]
gi|312884680|ref|ZP_07744381.1| 30S ribosomal protein S11 [Vibrio caribbenthicus ATCC BAA-2122]
gi|320157578|ref|YP_004189957.1| 30S ribosomal protein S11p (S14e) [Vibrio vulnificus MO6-24/O]
gi|323492142|ref|ZP_08097304.1| 30S ribosomal protein S11 [Vibrio brasiliensis LMG 20546]
gi|323495527|ref|ZP_08100601.1| 30S ribosomal protein S11 [Vibrio sinaloensis DSM 21326]
gi|54039340|sp|P66368|RS11_VIBPA RecName: Full=30S ribosomal protein S11
gi|54039341|sp|P66369|RS11_VIBVU RecName: Full=30S ribosomal protein S11
gi|54042114|sp|P66367|RS11_VIBCH RecName: Full=30S ribosomal protein S11
gi|59798815|sp|Q7MPG6|RS11_VIBVY RecName: Full=30S ribosomal protein S11
gi|166231842|sp|A7N0H6|RS11_VIBHB RecName: Full=30S ribosomal protein S11
gi|172047567|sp|A5F574|RS11_VIBC3 RecName: Full=30S ribosomal protein S11
gi|254811056|sp|C3LRN5|RS11_VIBCM RecName: Full=30S ribosomal protein S11
gi|9657159|gb|AAF95714.1| ribosomal protein S11 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|27360310|gb|AAO09247.1| SSU ribosomal protein S11p (S14e) [Vibrio vulnificus CMCP6]
gi|28805262|dbj|BAC58543.1| ribosomal protein S11 [Vibrio parahaemolyticus RIMD 2210633]
gi|37197321|dbj|BAC93161.1| ribosomal protein S11 [Vibrio vulnificus YJ016]
gi|124113314|gb|EAY32134.1| ribosomal protein S11 [Vibrio cholerae 1587]
gi|146314994|gb|ABQ19533.1| ribosomal protein S11 [Vibrio cholerae O395]
gi|148833783|gb|EDL50819.1| 30S ribosomal protein S11 [Vibrio shilonii AK1]
gi|149737817|gb|EDM52722.1| ribosomal protein S11 [Vibrio cholerae MZO-2]
gi|149746108|gb|EDM57238.1| ribosomal protein S11 [Vibrio parahaemolyticus AQ3810]
gi|150421842|gb|EDN13826.1| ribosomal protein S11 [Vibrio cholerae AM-19226]
gi|156524667|gb|ABU69753.1| hypothetical protein VIBHAR_00752 [Vibrio harveyi ATCC BAA-1116]
gi|219547623|gb|EED24670.1| ribosomal protein S11 [Vibrio parahaemolyticus 16]
gi|227010578|gb|ACP06790.1| ribosomal protein S11 [Vibrio cholerae M66-2]
gi|227014462|gb|ACP10672.1| ribosomal protein S11 [Vibrio cholerae O395]
gi|229335129|gb|EEO00614.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae 12129(1)]
gi|229338135|gb|EEO03152.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae bv. albensis
VL426]
gi|229341233|gb|EEO06237.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae TM 11079-80]
gi|229345889|gb|EEO10861.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae RC9]
gi|229349373|gb|EEO14329.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae TMA 21]
gi|229353175|gb|EEO18114.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae B33]
gi|229354880|gb|EEO19801.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae BX 330286]
gi|229369536|gb|ACQ59959.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae MJ-1236]
gi|254846818|gb|EET25232.1| ribosomal protein S11 [Vibrio cholerae MO10]
gi|255737983|gb|EET93376.1| SSU ribosomal protein S11p (S14e) [Vibrio cholera CIRS 101]
gi|258582001|gb|EEW06871.1| 30S ribosomal protein S11 [Vibrio mimicus VM603]
gi|258584923|gb|EEW09654.1| 30S ribosomal protein S11 [Vibrio mimicus VM573]
gi|260604289|gb|EEX30593.1| SSU ribosomal protein S11p (S14e) [Vibrio coralliilyticus ATCC
BAA-450]
gi|260612986|gb|EEX38188.1| SSU ribosomal protein S11p (S14e) [Vibrio metschnikovii CIP 69.14]
gi|260614173|gb|EEX39363.1| SSU ribosomal protein S11p (S14e) [Vibrio furnissii CIP 102972]
gi|260839629|gb|EEX66240.1| SSU ribosomal protein S11p (S14e) [Vibrio sp. RC341]
gi|260938963|gb|EEX94950.1| SSU ribosomal protein S11p (S14e) [Vibrio orientalis CIP 102891]
gi|261891566|gb|EEY37552.1| SSU ribosomal protein S11p (S14e) [Vibrio mimicus MB-451]
gi|262026310|gb|EEY44978.1| SSU ribosomal protein S11p (S14e) [Vibrio mimicus VM223]
gi|262336087|gb|ACY49882.1| SSU ribosomal protein S11p (S14e) [Vibrio sp. Ex25]
gi|262351832|gb|EEZ00963.1| SSU ribosomal protein S11p (S14e) [Vibrio sp. RC586]
gi|269830613|gb|EEZ84834.1| 30S ribosomal protein S11 [Vibrio alginolyticus 40B]
gi|269835634|gb|EEZ89713.1| 30S ribosomal protein S11 [Vibrio harveyi 1DA3]
gi|297534253|gb|EFH73091.1| ribosomal protein S11 [Vibrio cholerae RC385]
gi|297540772|gb|EFH76829.1| SSU ribosomal protein S11 [Vibrio cholerae MAK 757]
gi|308089503|gb|EFO39198.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus Peru-466]
gi|308089742|gb|EFO39437.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus AN-5034]
gi|308109056|gb|EFO46596.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus AQ4037]
gi|308114567|gb|EFO52107.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus K5030]
gi|309367593|gb|EFP95144.1| 30S ribosomal protein S11 [Vibrio caribbenthicus ATCC BAA-2122]
gi|319932890|gb|ADV87754.1| SSU ribosomal protein S11p (S14e) [Vibrio vulnificus MO6-24/O]
gi|323313703|gb|EGA66805.1| 30S ribosomal protein S11 [Vibrio brasiliensis LMG 20546]
gi|323319408|gb|EGA72345.1| 30S ribosomal protein S11 [Vibrio sinaloensis DSM 21326]
gi|327485055|gb|AEA79462.1| SSU ribosomal protein S11p (S14e) [Vibrio cholerae LMA3894-4]
gi|328471857|gb|EGF42734.1| 30S ribosomal protein S11 [Vibrio parahaemolyticus 10329]
Length = 129
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R R RK + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ A+ +G+ +LEV V G G GR+S +RAL A GF I +I D T I HNG
Sbjct: 61 FAAQVAAERCAEMAKEYGLKNLEVMVKGPGPGRESTVRALNAAGFRITNIVDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|68249396|ref|YP_248508.1| 30S ribosomal protein S11 [Haemophilus influenzae 86-028NP]
gi|145628305|ref|ZP_01784106.1| 30S ribosomal protein S11 [Haemophilus influenzae 22.1-21]
gi|145630547|ref|ZP_01786327.1| 30S ribosomal protein S11 [Haemophilus influenzae R3021]
gi|145632159|ref|ZP_01787894.1| 30S ribosomal protein S11 [Haemophilus influenzae 3655]
gi|145634788|ref|ZP_01790496.1| 30S ribosomal protein S11 [Haemophilus influenzae PittAA]
gi|145636641|ref|ZP_01792308.1| 30S ribosomal protein S11 [Haemophilus influenzae PittHH]
gi|145638398|ref|ZP_01794008.1| 30S ribosomal protein S11 [Haemophilus influenzae PittII]
gi|148826555|ref|YP_001291308.1| 30S ribosomal protein S11 [Haemophilus influenzae PittEE]
gi|229844668|ref|ZP_04464807.1| 30S ribosomal protein S11 [Haemophilus influenzae 6P18H1]
gi|229845851|ref|ZP_04465963.1| 30S ribosomal protein S11 [Haemophilus influenzae 7P49H1]
gi|260579892|ref|ZP_05847722.1| 30S ribosomal protein S11 [Haemophilus influenzae RdAW]
gi|260581617|ref|ZP_05849414.1| 30S ribosomal protein S11 [Haemophilus influenzae NT127]
gi|293390662|ref|ZP_06634996.1| 30S ribosomal protein S11 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|319775265|ref|YP_004137753.1| 30S ribosomal subunit protein S11 [Haemophilus influenzae F3047]
gi|319897705|ref|YP_004135902.1| 30S ribosomal subunit protein s11 [Haemophilus influenzae F3031]
gi|325577149|ref|ZP_08147633.1| 30S ribosomal protein S11 [Haemophilus parainfluenzae ATCC 33392]
gi|329122806|ref|ZP_08251378.1| 30S ribosomal protein S11 [Haemophilus aegyptius ATCC 11116]
gi|81336177|sp|Q4QM99|RS11_HAEI8 RecName: Full=30S ribosomal protein S11
gi|166231814|sp|A5UDS4|RS11_HAEIE RecName: Full=30S ribosomal protein S11
gi|68057595|gb|AAX87848.1| 30S ribosomal protein S11 [Haemophilus influenzae 86-028NP]
gi|144980080|gb|EDJ89739.1| 30S ribosomal protein S11 [Haemophilus influenzae 22.1-21]
gi|144983937|gb|EDJ91379.1| 30S ribosomal protein S11 [Haemophilus influenzae R3021]
gi|144987066|gb|EDJ93596.1| 30S ribosomal protein S11 [Haemophilus influenzae 3655]
gi|145267954|gb|EDK07950.1| 30S ribosomal protein S11 [Haemophilus influenzae PittAA]
gi|145270167|gb|EDK10103.1| 30S ribosomal protein S11 [Haemophilus influenzae PittHH]
gi|145272727|gb|EDK12634.1| 30S ribosomal protein S11 [Haemophilus influenzae PittII]
gi|148716715|gb|ABQ98925.1| 30S ribosomal protein S11 [Haemophilus influenzae PittEE]
gi|229810855|gb|EEP46572.1| 30S ribosomal protein S11 [Haemophilus influenzae 7P49H1]
gi|229812382|gb|EEP48072.1| 30S ribosomal protein S11 [Haemophilus influenzae 6P18H1]
gi|260093176|gb|EEW77109.1| 30S ribosomal protein S11 [Haemophilus influenzae RdAW]
gi|260095210|gb|EEW79101.1| 30S ribosomal protein S11 [Haemophilus influenzae NT127]
gi|290951196|gb|EFE01315.1| 30S ribosomal protein S11 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|301155353|emb|CBW14819.1| 30S ribosomal subunit protein S11 [Haemophilus parainfluenzae T3T1]
gi|301169519|emb|CBW29120.1| 30S ribosomal subunit protein S11 [Haemophilus influenzae 10810]
gi|309751538|gb|ADO81522.1| 30S ribosomal protein S11 [Haemophilus influenzae R2866]
gi|309973708|gb|ADO96909.1| 30S ribosomal protein S11 [Haemophilus influenzae R2846]
gi|317433211|emb|CBY81586.1| 30S ribosomal subunit protein S11 [Haemophilus influenzae F3031]
gi|317449856|emb|CBY86067.1| 30S ribosomal subunit protein S11 [Haemophilus influenzae F3047]
gi|325160731|gb|EGC72852.1| 30S ribosomal protein S11 [Haemophilus parainfluenzae ATCC 33392]
gi|327472070|gb|EGF17508.1| 30S ribosomal protein S11 [Haemophilus aegyptius ATCC 11116]
Length = 129
Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEIVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|222150470|ref|YP_002559623.1| 30S ribosomal protein S11 [Macrococcus caseolyticus JCSC5402]
gi|254811030|sp|B9E9L6|RS11_MACCJ RecName: Full=30S ribosomal protein S11
gi|222119592|dbj|BAH16927.1| 30S ribosomal protein S11 [Macrococcus caseolyticus JCSC5402]
Length = 129
Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITD GN ++WSS +GF GSRK++P
Sbjct: 1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ S A HG+ ++EV V G G GR++A+RAL++ G I +I DVT + HNG
Sbjct: 61 FAAQMASETASKAAMEHGLKTVEVTVKGPGQGREAAIRALQSAGLEITAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|294085981|ref|YP_003552741.1| 30S ribosomal protein S11 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665556|gb|ADE40657.1| Ribosomal protein S11 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 131
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 84/131 (64%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K PS R+R RERKNI +G AHV STFNNT ITITD GN IAW+S +GF GSRK+
Sbjct: 1 MAKQPSQGRVRRRERKNITNGVAHVNSTFNNTMITITDVQGNAIAWASAGGMGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A +D KA +HGM SL+V+V G G+GR+SALRAL+++GF + SI DVT I H
Sbjct: 61 TPFAAQMAAEDAGRKAADHGMKSLDVQVRGPGSGRESALRALQSVGFNVTSIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRPRKRRR+
Sbjct: 121 NGCRPRKRRRV 131
>gi|119478109|ref|ZP_01618188.1| Ribosomal protein S11 [marine gamma proteobacterium HTCC2143]
gi|119448815|gb|EAW30058.1| Ribosomal protein S11 [marine gamma proteobacterium HTCC2143]
Length = 129
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R + +K +V G AH+ ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKDNKPARKKVKKTVVDGIAHIHASFNNTIITITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +L+V+V G G GR+SA+RAL G+ I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGIAAQEYGLKNLDVEVKGPGPGRESAVRALNNAGYKIGSINDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|30248441|ref|NP_840511.1| 30S ribosomal protein S11 [Nitrosomonas europaea ATCC 19718]
gi|34925212|sp|Q82X71|RS11_NITEU RecName: Full=30S ribosomal protein S11
gi|30138327|emb|CAD84335.1| Ribosomal protein S11 [Nitrosomonas europaea ATCC 19718]
Length = 129
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +IR + +KN+V G AH+ ++FNNT +TI+D GN ++W++ VGF GSRK++P
Sbjct: 1 MVKPSLKIRKKVKKNVVEGVAHIHASFNNTIVTISDRQGNALSWATSGGVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +LEV+V G G GRDSA+RAL A GF I SI DVT I HNG
Sbjct: 61 FAAQVAAEHAGRAALEYGVKNLEVRVKGPGPGRDSAVRALNATGFKITSITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|118595312|ref|ZP_01552659.1| 30S ribosomal protein S11 [Methylophilales bacterium HTCC2181]
gi|118441090|gb|EAV47717.1| 30S ribosomal protein S11 [Methylophilales bacterium HTCC2181]
Length = 129
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ RI+ + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKANVRIKKKVKKNVSEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA ++ AQ G+ ++EV++ G G GR+S++RAL A+G I SI DVT + HNG
Sbjct: 61 FAAQVAAENAGKAAQEFGVKNIEVRIKGPGPGRESSVRALNAVGLKITSIQDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|86148805|ref|ZP_01067072.1| 30S ribosomal protein S11 [Vibrio sp. MED222]
gi|148982228|ref|ZP_01816654.1| 30S ribosomal protein S11 [Vibrionales bacterium SWAT-3]
gi|218710726|ref|YP_002418347.1| 30S ribosomal protein S11 [Vibrio splendidus LGP32]
gi|254811057|sp|B7VLD4|RS11_VIBSL RecName: Full=30S ribosomal protein S11
gi|85833395|gb|EAQ51586.1| 30S ribosomal protein S11 [Vibrio sp. MED222]
gi|145960590|gb|EDK25943.1| 30S ribosomal protein S11 [Vibrionales bacterium SWAT-3]
gi|218323745|emb|CAV20099.1| Ribosomal protein S11 [Vibrio splendidus LGP32]
Length = 129
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R R RK + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C A+ +G+ +LEV V G G GR+S +RAL A GF I +I D T I HNG
Sbjct: 61 FAAQVAAERCGEMAKEYGLKNLEVMVKGPGPGRESTVRALNAAGFRITNIVDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|33152931|ref|NP_874284.1| 30S ribosomal protein S11 [Haemophilus ducreyi 35000HP]
gi|46143636|ref|ZP_00134834.2| COG0100: Ribosomal protein S11 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209246|ref|YP_001054471.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae L20]
gi|165977219|ref|YP_001652812.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190151137|ref|YP_001969662.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303250035|ref|ZP_07336237.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253209|ref|ZP_07339358.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307246712|ref|ZP_07528782.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248853|ref|ZP_07530866.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307251081|ref|ZP_07533005.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307253467|ref|ZP_07535338.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307255697|ref|ZP_07537501.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260149|ref|ZP_07541859.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262277|ref|ZP_07543926.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307264486|ref|ZP_07546071.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|59798858|sp|Q7VKF6|RS11_HAEDU RecName: Full=30S ribosomal protein S11
gi|152060568|sp|A3N380|RS11_ACTP2 RecName: Full=30S ribosomal protein S11
gi|226708321|sp|B3GZ34|RS11_ACTP7 RecName: Full=30S ribosomal protein S11
gi|226708322|sp|B0BSV4|RS11_ACTPJ RecName: Full=30S ribosomal protein S11
gi|33149156|gb|AAP96673.1| 30S ribosomal protein S11 [Haemophilus ducreyi 35000HP]
gi|126098038|gb|ABN74866.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165877320|gb|ABY70368.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189916268|gb|ACE62520.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647891|gb|EFL78098.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651098|gb|EFL81252.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306852412|gb|EFM84647.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306854780|gb|EFM86970.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306856911|gb|EFM89043.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306859146|gb|EFM91188.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306861374|gb|EFM93364.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865795|gb|EFM97673.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868040|gb|EFM99867.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870183|gb|EFN01942.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 129
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K I G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|262273356|ref|ZP_06051170.1| SSU ribosomal protein S11p (S14e) [Grimontia hollisae CIP 101886]
gi|262222334|gb|EEY73645.1| SSU ribosomal protein S11p (S14e) [Grimontia hollisae CIP 101886]
Length = 129
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R R RK + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKQPNRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C A+ +G+ +LEV V G G GR+S +RAL A GF I +I D T I HNG
Sbjct: 61 FAAQVAAERCGEMAKEYGLKNLEVMVKGPGPGRESTIRALNAAGFRITNIVDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|288958718|ref|YP_003449059.1| small subunit ribosomal protein S11 [Azospirillum sp. B510]
gi|288911026|dbj|BAI72515.1| small subunit ribosomal protein S11 [Azospirillum sp. B510]
Length = 132
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/132 (62%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Query: 1 MPK---SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K + R+R RERKNI +G AHV ++FNNT ITITD GNTIAWSS +GF GSRK
Sbjct: 1 MAKPSAASQRLRRRERKNITAGVAHVNASFNNTMITITDAQGNTIAWSSSGTMGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++P+AAQVA +D KAQ HGM +LEV+V G G+GR+SALRAL++IGF I SI DVT I
Sbjct: 61 STPYAAQVAAEDAGRKAQEHGMKTLEVEVKGPGSGRESALRALQSIGFQITSIRDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNG RP K+RR+
Sbjct: 121 HNGVRPPKKRRV 132
>gi|85713165|ref|ZP_01044197.1| 30S ribosomal protein S11 [Idiomarina baltica OS145]
gi|85693035|gb|EAQ31001.1| 30S ribosomal protein S11 [Idiomarina baltica OS145]
Length = 129
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +R R R +K + G AHV ++FNNT ITITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKAQTRSRKRVKKQVADGMAHVHASFNNTIITITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +LEV V+G G GR+S++RAL A+G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEMAKEYGLKNLEVFVNGPGPGRESSIRALNAVGYRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|295109500|emb|CBL23453.1| SSU ribosomal protein S11P [Ruminococcus obeum A2-162]
Length = 131
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKATRKATTKRRVKKNVEHGQAHIQSSFNNTIVTLTDSEGNALSWASAGGLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + A HG+ +++V V G G+GR++A+RAL+A G + SI DVT + H
Sbjct: 61 TPYAAQMAAETATKAALIHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|54307564|ref|YP_128584.1| 30S ribosomal protein S11 [Photobacterium profundum SS9]
gi|89076301|ref|ZP_01162642.1| 30S ribosomal protein S11 [Photobacterium sp. SKA34]
gi|90414979|ref|ZP_01222941.1| 30S ribosomal protein S11 [Photobacterium profundum 3TCK]
gi|90581701|ref|ZP_01237489.1| 30S ribosomal protein S11 [Vibrio angustum S14]
gi|330447014|ref|ZP_08310664.1| 30S ribosomal subunit protein S11 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|59798727|sp|Q6LV93|RS11_PHOPR RecName: Full=30S ribosomal protein S11
gi|46911984|emb|CAG18782.1| putative ribosomal protein S11 [Photobacterium profundum SS9]
gi|89048005|gb|EAR53594.1| 30S ribosomal protein S11 [Photobacterium sp. SKA34]
gi|90323918|gb|EAS40518.1| 30S ribosomal protein S11 [Photobacterium profundum 3TCK]
gi|90437116|gb|EAS62319.1| 30S ribosomal protein S11 [Vibrio angustum S14]
gi|328491205|dbj|GAA05161.1| 30S ribosomal subunit protein S11 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 129
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R R RK + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C A+ +G+ +LEV V G G GR+S +RAL A GF I +I D T I HNG
Sbjct: 61 FAAQVAAERCGEMAKEYGVKNLEVMVKGPGPGRESTIRALNAAGFRITNIVDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|291613260|ref|YP_003523417.1| 30S ribosomal protein S11 [Sideroxydans lithotrophicus ES-1]
gi|291583372|gb|ADE11030.1| 30S ribosomal protein S11 [Sideroxydans lithotrophicus ES-1]
Length = 129
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R + +KN+ G AHV ++FNNT +TITD GNT+AWS+ GF GSRK++P
Sbjct: 1 MAKPSTRVRKKVKKNVAEGIAHVHASFNNTIVTITDRQGNTLAWSTSGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + A G+ +LEV++ G G GR+SA+RAL A GF I SI D+T + HNG
Sbjct: 61 FAAQIAAETVGKSAVECGVKNLEVRIKGPGPGRESAVRALNAAGFKITSISDITPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|300022564|ref|YP_003755175.1| 30S ribosomal protein S11 [Hyphomicrobium denitrificans ATCC 51888]
gi|299524385|gb|ADJ22854.1| 30S ribosomal protein S11 [Hyphomicrobium denitrificans ATCC 51888]
Length = 133
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K S +++ RE+KNI SG AHV ++FNNT ITITD GNTIAWSS GF GSR
Sbjct: 1 MAKEASAARGKVKKREKKNITSGVAHVNASFNNTMITITDAQGNTIAWSSSGTKGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A +D KAQ HGM LEV+V G G+GR+SALRAL+++GF I SI DVT I
Sbjct: 61 KSTPYAAQIAAEDAGRKAQEHGMKVLEVEVCGPGSGRESALRALQSVGFQITSIRDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRPRKRRR+
Sbjct: 121 PHNGCRPRKRRRV 133
>gi|293393289|ref|ZP_06637603.1| 30S ribosomal protein S11 [Serratia odorifera DSM 4582]
gi|291424199|gb|EFE97414.1| 30S ribosomal protein S11 [Serratia odorifera DSM 4582]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRTRKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|153812443|ref|ZP_01965111.1| hypothetical protein RUMOBE_02842 [Ruminococcus obeum ATCC 29174]
gi|149831368|gb|EDM86456.1| hypothetical protein RUMOBE_02842 [Ruminococcus obeum ATCC 29174]
Length = 131
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKTTRKATTKRRVKKNVEHGQAHIQSSFNNTIVTLTDSEGNALSWASAGGLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + A HG+ +++V V G G+GR++A+RAL+A G + SI DVT + H
Sbjct: 61 TPYAAQMAAETATKAALIHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|254283381|ref|ZP_04958349.1| ribosomal protein S11 [gamma proteobacterium NOR51-B]
gi|219679584|gb|EED35933.1| ribosomal protein S11 [gamma proteobacterium NOR51-B]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + K +V G AHV ++FNNT +TITD GNT++W++ GF GSRK++P
Sbjct: 1 MAKQAKTTKRKITKQVVDGVAHVHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEAAKEYGLKNLDVQVKGPGPGRESAVRALNACGYRISNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|209964063|ref|YP_002296978.1| 30S ribosomal protein S11 [Rhodospirillum centenum SW]
gi|209957529|gb|ACI98165.1| ribosomal protein S11 [Rhodospirillum centenum SW]
Length = 132
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/132 (62%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Query: 1 MPK---SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K S +R+R RERKNI +G AHV ++FNNT ITITD GN IAWSS +GF GSRK
Sbjct: 1 MAKPSASAARLRRRERKNITAGVAHVNASFNNTMITITDAQGNAIAWSSAGTMGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++P+AAQVA +D KAQ HGM +LEV+V G G+GR+SALRAL++IGF I SI DVT I
Sbjct: 61 STPYAAQVAAEDAGRKAQEHGMKTLEVEVKGPGSGRESALRALQSIGFQITSIRDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNG RP K+RR+
Sbjct: 121 HNGVRPPKKRRV 132
>gi|148554248|ref|YP_001261830.1| 30S ribosomal protein S11 [Sphingomonas wittichii RW1]
gi|166231836|sp|A5V5X6|RS11_SPHWW RecName: Full=30S ribosomal protein S11
gi|148499438|gb|ABQ67692.1| SSU ribosomal protein S11P [Sphingomonas wittichii RW1]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/129 (62%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RIR RERKNI +G AHV ++FNNT ITITD GN IAWSS ++GF GSRK++P
Sbjct: 1 MAREPQRIRRRERKNITAGVAHVNASFNNTMITITDAQGNAIAWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HG+ +LEV+V G G+GR+SALRAL+A+GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFHITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|86749438|ref|YP_485934.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris HaA2]
gi|123098751|sp|Q2IXN7|RS11_RHOP2 RecName: Full=30S ribosomal protein S11
gi|86572466|gb|ABD07023.1| SSU ribosomal protein S11P [Rhodopseudomonas palustris HaA2]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K RIR RERKNI SG AHV S+FNNT ITITD GN IAWSS +GF GSRK++P
Sbjct: 1 MAKEAGRIRRRERKNIASGIAHVNSSFNNTTITITDAQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVAKKAQEHGMRTLEVEVAGPGSGRESALRALQASGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|103486059|ref|YP_615620.1| 30S ribosomal protein S11 [Sphingopyxis alaskensis RB2256]
gi|122985219|sp|Q1GVN5|RS11_SPHAL RecName: Full=30S ribosomal protein S11
gi|98976136|gb|ABF52287.1| SSU ribosomal protein S11P [Sphingopyxis alaskensis RB2256]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R+R RERKNI SG AHV +TFNNT ITITD GN IAWSS ++GF GSRK++P
Sbjct: 1 MAREPQRLRRRERKNISSGVAHVNATFNNTMITITDAQGNAIAWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQV +D KA HG+ +LEV+V G GAGR+SALRAL+A+GF I SI DVT I HNG
Sbjct: 61 YAAQVCAEDAGKKAAEHGVRTLEVEVKGPGAGRESALRALQAVGFHITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPAKRRRV 129
>gi|88812734|ref|ZP_01127980.1| 30S ribosomal subunit protein S11 [Nitrococcus mobilis Nb-231]
gi|88789972|gb|EAR21093.1| 30S ribosomal subunit protein S11 [Nitrococcus mobilis Nb-231]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ SR R R ++ +V G AH+ ++FNNT IT+TD GN +AW+S GF SRK++P
Sbjct: 1 MAKASSRTRKRVKRTVVDGIAHINASFNNTIITLTDRQGNVLAWASAGGSGFRSSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA++ A+++G+ +LEV+V G G GR+SA+RAL G+ I +I DVT I HNG
Sbjct: 61 FAAQVASERAGEAAKDYGLKNLEVRVKGPGPGRESAVRALNNAGYRITNISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|320540588|ref|ZP_08040238.1| 30S ribosomal subunit protein S11 [Serratia symbiotica str. Tucson]
gi|320029519|gb|EFW11548.1| 30S ribosomal subunit protein S11 [Serratia symbiotica str. Tucson]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AHV ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRTRKRVRKQVSDGVAHVYASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|254294417|ref|YP_003060440.1| ribosomal protein S11 [Hirschia baltica ATCC 49814]
gi|254042948|gb|ACT59743.1| ribosomal protein S11 [Hirschia baltica ATCC 49814]
Length = 129
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 98/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ RKNI SG AHV S+FNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAREQTRVKRSARKNISSGVAHVNSSFNNTMITITDAQGNAISWSSAGHMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KAQ HG+ SLEV+V G G+GR+SALRAL++IG TI +I D+T I HNG
Sbjct: 61 YAAQVAAEDAGRKAQEHGLKSLEVQVRGPGSGRESALRALQSIGLTITTIHDITAIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|315925229|ref|ZP_07921443.1| 30S ribosomal protein S11 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621463|gb|EFV01430.1| 30S ribosomal protein S11 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 130
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRE-RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + R+ +KNI G+ H+ S+FNNT +TITD GN ++W+S +GF GS+K++
Sbjct: 1 MAKKAVRSKKRKIKKNIERGQVHIQSSFNNTIVTITDTAGNALSWASAGEMGFRGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A++ + A HG+ S+EV V G G+GR++A+RAL+A G I I DVT I HN
Sbjct: 61 PFAAQMASEQAAKLAMEHGLRSVEVNVKGPGSGREAAIRALQAAGLEITVIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|145588265|ref|YP_001154862.1| 30S ribosomal protein S11 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|226708398|sp|A4SUY4|RS11_POLSQ RecName: Full=30S ribosomal protein S11
gi|145046671|gb|ABP33298.1| SSU ribosomal protein S11P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 135
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/135 (49%), Positives = 88/135 (65%), Gaps = 6/135 (4%)
Query: 1 MPKSPS------RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSG 54
M K S R R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF G
Sbjct: 1 MAKQQSASAASQRARKKVKKNVADGIAHVHASFNNTIITITDRQGNALSWATSGGQGFKG 60
Query: 55 SRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVT 114
SRK++PFAAQVA + A G+ +LEV++ G G GR+SA+RAL ++G I I DVT
Sbjct: 61 SRKSTPFAAQVAAEVAGKAAVECGIKNLEVQIKGPGPGRESAVRALNSLGIKITEIQDVT 120
Query: 115 MIAHNGCRPRKRRRI 129
+ HNGCRP KRRRI
Sbjct: 121 PVPHNGCRPPKRRRI 135
>gi|109897337|ref|YP_660592.1| 30S ribosomal protein S11 [Pseudoalteromonas atlantica T6c]
gi|123064914|sp|Q15X50|RS11_PSEA6 RecName: Full=30S ribosomal protein S11
gi|109699618|gb|ABG39538.1| SSU ribosomal protein S11P [Pseudoalteromonas atlantica T6c]
gi|332175076|gb|AEE24330.1| 30S ribosomal protein S11 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 130
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+P++ R R ++ + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKAPTKSTRKRAKRQVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL A G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGTAAQDYGLKNLEVFVKGPGPGRESAIRALNAAGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|261346912|ref|ZP_05974556.1| 30S ribosomal protein S11 [Providencia rustigianii DSM 4541]
gi|288933289|ref|YP_003437348.1| 30S ribosomal protein S11 [Klebsiella variicola At-22]
gi|290512091|ref|ZP_06551459.1| 30S ribosomal protein S11 [Klebsiella sp. 1_1_55]
gi|282564978|gb|EFB70513.1| 30S ribosomal protein S11 [Providencia rustigianii DSM 4541]
gi|288888018|gb|ADC56336.1| 30S ribosomal protein S11 [Klebsiella variicola At-22]
gi|289775881|gb|EFD83881.1| 30S ribosomal protein S11 [Klebsiella sp. 1_1_55]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|78484662|ref|YP_390587.1| 30S ribosomal protein S11 [Thiomicrospira crunogena XCL-2]
gi|91207684|sp|Q31IW0|RS11_THICR RecName: Full=30S ribosomal protein S11
gi|78362948|gb|ABB40913.1| SSU ribosomal protein S11P [Thiomicrospira crunogena XCL-2]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ SR++ + ++ + AHV +TFNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKANSRVKKKAKQVVTDAVAHVHATFNNTIVTITDRQGNALCWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +++V V G G GRDSA+R L ++GF I SI DVT I HNG
Sbjct: 61 FAAQVAAERAGQMATEYGVKNMDVMVKGPGPGRDSAVRGLNSVGFKITSISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|304391479|ref|ZP_07373421.1| 30S ribosomal protein S11 [Ahrensia sp. R2A130]
gi|303295708|gb|EFL90066.1| 30S ribosomal protein S11 [Ahrensia sp. R2A130]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/129 (65%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ +ERKNI SG AHV STFNNT ITITD GNTIAWSS GF GSRK++P
Sbjct: 1 MAKDAARVKRKERKNIASGVAHVNSTFNNTMITITDAQGNTIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +D KAQ+HGM +LEV+V G G+GR+SALRAL++IGF I SI DVT + HNG
Sbjct: 61 FAAQVAAEDAGKKAQDHGMKTLEVEVRGPGSGRESALRALQSIGFVITSIRDVTSVPHNG 120
Query: 121 CRPRKRRRI 129
CR RK+RR+
Sbjct: 121 CRARKQRRV 129
>gi|226953894|ref|ZP_03824358.1| 30S ribosomal protein S11 [Acinetobacter sp. ATCC 27244]
gi|294651611|ref|ZP_06728915.1| 30S ribosomal protein S11 [Acinetobacter haemolyticus ATCC 19194]
gi|226835377|gb|EEH67760.1| 30S ribosomal protein S11 [Acinetobacter sp. ATCC 27244]
gi|292822460|gb|EFF81359.1| 30S ribosomal protein S11 [Acinetobacter haemolyticus ATCC 19194]
Length = 128
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + + + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAK-DTRTRKKVSRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A ++G+ +L+V V G G GR+SA+RAL A+G+ I SI DVT I HNG
Sbjct: 60 FAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|94496224|ref|ZP_01302802.1| 30S ribosomal protein S11 [Sphingomonas sp. SKA58]
gi|294010566|ref|YP_003544026.1| ribosomal protein S11 [Sphingobium japonicum UT26S]
gi|307294932|ref|ZP_07574774.1| 30S ribosomal protein S11 [Sphingobium chlorophenolicum L-1]
gi|94424403|gb|EAT09426.1| 30S ribosomal protein S11 [Sphingomonas sp. SKA58]
gi|292673896|dbj|BAI95414.1| ribosomal protein S11 [Sphingobium japonicum UT26S]
gi|306879406|gb|EFN10624.1| 30S ribosomal protein S11 [Sphingobium chlorophenolicum L-1]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 98/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RI+ RERKNI +G AHV ++FNNT +TITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPQRIKRRERKNISAGVAHVNASFNNTMVTITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQV +D KA HG+ +LEV+V G G+GR+SALRAL+A+GF I SI DVT I HNG
Sbjct: 61 YAAQVCAEDAGRKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFHITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|78221871|ref|YP_383618.1| 30S ribosomal protein S11 [Geobacter metallireducens GS-15]
gi|91207783|sp|Q39XY1|RS11_GEOMG RecName: Full=30S ribosomal protein S11
gi|78193126|gb|ABB30893.1| SSU ribosomal protein S11P [Geobacter metallireducens GS-15]
Length = 131
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 75/115 (65%), Positives = 90/115 (78%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN +AWSS GF GSRK++PFAAQVA +DC+ KA
Sbjct: 17 NIPNGVAHIQATFNNTIITITDPAGNVVAWSSAGGKGFKGSRKSTPFAAQVAAEDCAKKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q+HGM S+EV V G G+GR+SALRAL+A GF + I DVT I HNGCRP KRRR+
Sbjct: 77 QDHGMRSVEVYVKGPGSGRESALRALQAAGFHVNFIRDVTPIPHNGCRPPKRRRV 131
>gi|163752125|ref|ZP_02159330.1| 30S ribosomal protein S11 [Shewanella benthica KT99]
gi|161327960|gb|EDP99135.1| 30S ribosomal protein S11 [Shewanella benthica KT99]
Length = 130
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KSPSR R R RK + G AH+ ++FNNT ITITD GNT++W++ GF GSRK++
Sbjct: 1 MAKSPSRSPRKRVRKQVADGMAHIHASFNNTIITITDRQGNTLSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL ++G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGVKNLEVFVKGPGPGRESAIRALNSVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|117924178|ref|YP_864795.1| 30S ribosomal protein S11 [Magnetococcus sp. MC-1]
gi|152060788|sp|A0L5Z6|RS11_MAGSM RecName: Full=30S ribosomal protein S11
gi|117607934|gb|ABK43389.1| SSU ribosomal protein S11P [Magnetococcus sp. MC-1]
Length = 131
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/131 (59%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ R + +ERKNI SG AH+ STFNNT ITITD HGN+I+W S GF GSRK+
Sbjct: 1 MAKAQKGARTKKKERKNIASGIAHIHSTFNNTLITITDTHGNSISWGSAGAQGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A ++ KA +HGM +LEV++ G G+GR+SALRAL AIGF I + DVT I H
Sbjct: 61 TPFAAQMAAENAGKKAMDHGMRNLEVRLKGPGSGRESALRALAAIGFNISHVQDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|322831095|ref|YP_004211122.1| 30S ribosomal protein S11 [Rahnella sp. Y9602]
gi|321166296|gb|ADW71995.1| 30S ribosomal protein S11 [Rahnella sp. Y9602]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRTRKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|148256369|ref|YP_001240954.1| 30S ribosomal protein S11 [Bradyrhizobium sp. BTAi1]
gi|166231801|sp|A5ELK4|RS11_BRASB RecName: Full=30S ribosomal protein S11
gi|146408542|gb|ABQ37048.1| SSU ribosomal protein S11P [Bradyrhizobium sp. BTAi1]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MAKEATRVRRRERKNIASGVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|310659476|ref|YP_003937197.1| 30S ribosomal protein S11 [Clostridium sticklandii DSM 519]
gi|308826254|emb|CBH22292.1| 30S ribosomal subunit protein S11 [Clostridium sticklandii]
Length = 132
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/127 (55%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +R++ RERKNI G AH+ STFNNT IT+TD HGN ++W+S +GF GSRK++PFA
Sbjct: 6 KKVTRVKRRERKNIEKGHAHIQSTFNNTIITLTDVHGNALSWASAGQLGFKGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A HG+ S+EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 66 AQMAAETATKGAMEHGLRSVEVFVKGPGSGREAAIRALQAAGLDVTMIKDVTPIPHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|85374440|ref|YP_458502.1| 30S ribosomal protein S11 [Erythrobacter litoralis HTCC2594]
gi|123099514|sp|Q2N9D6|RS11_ERYLH RecName: Full=30S ribosomal protein S11
gi|84787523|gb|ABC63705.1| ribosomal protein S11 [Erythrobacter litoralis HTCC2594]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/129 (63%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R+R RERKNI SG AHV ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPGRVRRRERKNITSGVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALRAL+A+GFTI SI DVT I HNG
Sbjct: 61 YAAQVAADDAGRKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|115525562|ref|YP_782473.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris BisA53]
gi|122295430|sp|Q07KP1|RS11_RHOP5 RecName: Full=30S ribosomal protein S11
gi|115519509|gb|ABJ07493.1| SSU ribosomal protein S11P [Rhodopseudomonas palustris BisA53]
Length = 129
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RIR RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MAKEATRIRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|298243943|ref|ZP_06967750.1| 30S ribosomal protein S11 [Ktedonobacter racemifer DSM 44963]
gi|297556997|gb|EFH90861.1| 30S ribosomal protein S11 [Ktedonobacter racemifer DSM 44963]
Length = 133
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R RERK+I G+AH+ +TFNNT +T+TDP+GN I+W S GF GSRK++P+AA
Sbjct: 8 TTGKVRRRERKSIPRGQAHIQATFNNTIVTLTDPNGNVISWGSAGAQGFKGSRKSTPYAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QV + + +A +HG+ ++V V G G+GR++A+R+L+A G + SI DVT I HNGCRP
Sbjct: 68 QVTAETAARRAMDHGLKQIDVFVKGPGSGREAAIRSLQASGLNVTSITDVTPIPHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 PKRRRV 133
>gi|288942049|ref|YP_003444289.1| 30S ribosomal protein S11 [Allochromatium vinosum DSM 180]
gi|288897421|gb|ADC63257.1| 30S ribosomal protein S11 [Allochromatium vinosum DSM 180]
Length = 129
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + +K + G AHV ++FNNT ITITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKPIRNTKKKIKKQVADGVAHVHASFNNTIITITDRQGNALAWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA D A+ +G+ +L+V V G G GR+SA+RAL GF I SI DVT I HNG
Sbjct: 61 FAAQVAADKAGQAAKEYGLRNLDVNVKGPGPGRESAVRALNNAGFKITSITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|170728986|ref|YP_001763012.1| 30S ribosomal protein S11 [Shewanella woodyi ATCC 51908]
gi|294142910|ref|YP_003558888.1| 30S ribosomal protein S11 [Shewanella violacea DSS12]
gi|226708416|sp|B1KMW0|RS11_SHEWM RecName: Full=30S ribosomal protein S11
gi|302393752|sp|Q9S0R0|RS11_SHEVD RecName: Full=30S ribosomal protein S11
gi|169814333|gb|ACA88917.1| ribosomal protein S11 [Shewanella woodyi ATCC 51908]
gi|293329379|dbj|BAJ04110.1| ribosomal protein S11 [Shewanella violacea DSS12]
Length = 130
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KSPSR R R RK + G AH+ ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKSPSRSPRKRVRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL ++G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGVKNLEVFVKGPGPGRESAIRALNSVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|306821593|ref|ZP_07455191.1| 30S ribosomal protein S11 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550338|gb|EFM38331.1| 30S ribosomal protein S11 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 133
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +R+R +ERKNI G AH+ STFNNT +T++D GN I+W+S +GF GSRK++PFA
Sbjct: 7 KKVTRVRRKERKNIEKGHAHIQSTFNNTIVTLSDVQGNAISWASAGQLGFKGSRKSTPFA 66
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A HG+ S++V V G GAGR++A+RAL+A G + I DVT I HNGCR
Sbjct: 67 AQMAAETATKAAIEHGLKSVDVFVKGPGAGREAAIRALQAAGLEVTMIKDVTPIPHNGCR 126
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 127 PPKRRRV 133
>gi|39936290|ref|NP_948566.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris CGA009]
gi|192292013|ref|YP_001992618.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris TIE-1]
gi|316933550|ref|YP_004108532.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris DX-1]
gi|59798742|sp|Q6N4V6|RS11_RHOPA RecName: Full=30S ribosomal protein S11; AltName: Full=RRP-S11
gi|226708408|sp|B3QBV6|RS11_RHOPT RecName: Full=30S ribosomal protein S11
gi|39650145|emb|CAE28668.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris CGA009]
gi|192285762|gb|ACF02143.1| ribosomal protein S11 [Rhodopseudomonas palustris TIE-1]
gi|315601264|gb|ADU43799.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris DX-1]
Length = 129
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RIR RERKNI SG AHV S+FNNT ITITD GN IAWSS +GF GSRK++P
Sbjct: 1 MAKDATRIRRRERKNIASGIAHVNSSFNNTTITITDAQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVAKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|260655358|ref|ZP_05860846.1| 30S ribosomal protein S11 [Jonquetella anthropi E3_33 E1]
gi|260629806|gb|EEX48000.1| 30S ribosomal protein S11 [Jonquetella anthropi E3_33 E1]
Length = 130
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS +R + +E+KNI SG AH+ STFNNT ++ITD G +AW+S VGF G+RK++
Sbjct: 1 MAKSTARKGKRKEKKNISSGVAHIFSTFNNTIVSITDKGGALLAWASGGNVGFKGARKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA+ AQ+ GM ++V V G G GR+SA+RAL+AIG + SI D T I HN
Sbjct: 61 PFAAQVASQQAGKVAQDQGMHEIDVVVKGPGPGRESAIRALQAIGLQVNSIKDETPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|146313362|ref|YP_001178436.1| 30S ribosomal protein S11 [Enterobacter sp. 638]
gi|166991579|sp|A4WFA5|RS11_ENT38 RecName: Full=30S ribosomal protein S11
gi|145320238|gb|ABP62385.1| SSU ribosomal protein S11P [Enterobacter sp. 638]
gi|295096940|emb|CBK86030.1| SSU ribosomal protein S11P [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 129
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|296137041|ref|YP_003644283.1| 30S ribosomal protein S11 [Thiomonas intermedia K12]
gi|294341218|emb|CAZ89619.1| 30S ribosomal subunit protein S11 [Thiomonas sp. 3As]
gi|295797163|gb|ADG31953.1| 30S ribosomal protein S11 [Thiomonas intermedia K12]
Length = 135
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/135 (49%), Positives = 86/135 (63%), Gaps = 6/135 (4%)
Query: 1 MPKSPS------RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSG 54
M K S R R + RKN+ G AHV ++FNNT ITITD GN ++ SS GF G
Sbjct: 1 MAKPSSQNSAAQRARKKVRKNVSDGIAHVHASFNNTIITITDRQGNALSASSSGAQGFKG 60
Query: 55 SRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVT 114
SRK++PFAAQVA + A +G+ +LEV + G G GR+S++RAL +G + I DVT
Sbjct: 61 SRKSTPFAAQVAAEQAGRVALEYGIKNLEVFIKGPGPGRESSVRALNNLGIKVTLIEDVT 120
Query: 115 MIAHNGCRPRKRRRI 129
I HNGCRP KRRR+
Sbjct: 121 PIPHNGCRPPKRRRV 135
>gi|326803057|ref|YP_004320875.1| 30S ribosomal protein S11 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650602|gb|AEA00785.1| 30S ribosomal protein S11 [Aerococcus urinae ACS-120-V-Col10a]
Length = 131
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + + R +K++ SG AH+ STFNNT + ITD GN I+WSS +GF GSRK+
Sbjct: 1 MAKAKRQGSRKRRVKKHVESGVAHIHSTFNNTIVMITDEQGNAISWSSAGALGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A++ + A +HGM ++EV V G G+GR+SA+RAL+A G + +I DVT I H
Sbjct: 61 TPYAAQLASETAAKTAMDHGMKTVEVSVKGPGSGRESAIRALQAAGLEVTAIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|212709002|ref|ZP_03317130.1| hypothetical protein PROVALCAL_00034 [Providencia alcalifaciens DSM
30120]
gi|212688368|gb|EEB47896.1| hypothetical protein PROVALCAL_00034 [Providencia alcalifaciens DSM
30120]
Length = 129
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAESVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|119773377|ref|YP_926117.1| 30S ribosomal protein S11 [Shewanella amazonensis SB2B]
gi|152060819|sp|A1S241|RS11_SHEAM RecName: Full=30S ribosomal protein S11
gi|119765877|gb|ABL98447.1| SSU ribosomal protein S11P [Shewanella amazonensis SB2B]
Length = 130
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL A+G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGLKNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|225387212|ref|ZP_03756976.1| hypothetical protein CLOSTASPAR_00964 [Clostridium asparagiforme
DSM 15981]
gi|225046691|gb|EEG56937.1| hypothetical protein CLOSTASPAR_00964 [Clostridium asparagiforme
DSM 15981]
Length = 123
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 59/122 (48%), Positives = 89/122 (72%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
+ R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A
Sbjct: 2 TKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAA 61
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ + A HG+ +++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRR
Sbjct: 62 ETATKAALVHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPVPHNGCRPPKRR 121
Query: 128 RI 129
R+
Sbjct: 122 RV 123
>gi|59710867|ref|YP_203643.1| 30S ribosomal protein S11 [Vibrio fischeri ES114]
gi|197334125|ref|YP_002155019.1| 30S ribosomal protein S11 [Vibrio fischeri MJ11]
gi|209693946|ref|YP_002261874.1| 30S ribosomal protein S11 [Aliivibrio salmonicida LFI1238]
gi|269104035|ref|ZP_06156732.1| SSU ribosomal protein S11p (S14e) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|75354724|sp|Q5E891|RS11_VIBF1 RecName: Full=30S ribosomal protein S11
gi|226708323|sp|B6EPU7|RS11_ALISL RecName: Full=30S ribosomal protein S11
gi|226708432|sp|B5FGD9|RS11_VIBFM RecName: Full=30S ribosomal protein S11
gi|59478968|gb|AAW84755.1| 30S ribosomal subunit protein S11 [Vibrio fischeri ES114]
gi|197315615|gb|ACH65062.1| 30S ribosomal protein S11 [Vibrio fischeri MJ11]
gi|208007897|emb|CAQ78027.1| 30S ribosomal protein S11 [Aliivibrio salmonicida LFI1238]
gi|268163933|gb|EEZ42429.1| SSU ribosomal protein S11p (S14e) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 129
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R R RK + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C A+ +G+ +LEV V G G GR+S +RAL A G+ I +I D T I HNG
Sbjct: 61 FAAQVAAERCGEMAKEYGVKNLEVMVKGPGPGRESTIRALNAAGYRITNIVDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|188535255|ref|YP_001909052.1| 30S ribosomal protein S11 [Erwinia tasmaniensis Et1/99]
gi|259909977|ref|YP_002650333.1| 30S ribosomal protein S11 [Erwinia pyrifoliae Ep1/96]
gi|291619152|ref|YP_003521894.1| RpsK [Pantoea ananatis LMG 20103]
gi|292489826|ref|YP_003532716.1| 30S ribosomal protein S11 [Erwinia amylovora CFBP1430]
gi|292900868|ref|YP_003540237.1| 30S ribosomal protein S11 [Erwinia amylovora ATCC 49946]
gi|300718682|ref|YP_003743485.1| 30S ribosomal protein S11 [Erwinia billingiae Eb661]
gi|304399267|ref|ZP_07381133.1| 30S ribosomal protein S11 [Pantoea sp. aB]
gi|308188333|ref|YP_003932464.1| 30S ribosomal protein S11 [Pantoea vagans C9-1]
gi|317049817|ref|YP_004117465.1| 30S ribosomal protein S11 [Pantoea sp. At-9b]
gi|329298511|ref|ZP_08255847.1| 30S ribosomal protein S11 [Plautia stali symbiont]
gi|226708371|sp|B2VK73|RS11_ERWT9 RecName: Full=30S ribosomal protein S11
gi|188030297|emb|CAO98186.1| 30S ribosomal protein S11 [Erwinia tasmaniensis Et1/99]
gi|224965599|emb|CAX57131.1| 30S ribosomal protein S11 [Erwinia pyrifoliae Ep1/96]
gi|291154182|gb|ADD78766.1| RpsK [Pantoea ananatis LMG 20103]
gi|291200716|emb|CBJ47849.1| 30S ribosomal subunit protein S11 [Erwinia amylovora ATCC 49946]
gi|291555263|emb|CBA23543.1| 30S ribosomal protein S11 [Erwinia amylovora CFBP1430]
gi|299064518|emb|CAX61638.1| 30S ribosomal protein S11 [Erwinia billingiae Eb661]
gi|304353193|gb|EFM17574.1| 30S ribosomal protein S11 [Pantoea sp. aB]
gi|308058843|gb|ADO11015.1| 30S ribosomal protein S11 [Pantoea vagans C9-1]
gi|310765575|gb|ADP10525.1| 30S ribosomal protein S11 [Erwinia sp. Ejp617]
gi|312174008|emb|CBX82261.1| 30S ribosomal protein S11 [Erwinia amylovora ATCC BAA-2158]
gi|316951434|gb|ADU70909.1| 30S ribosomal protein S11 [Pantoea sp. At-9b]
gi|327395481|dbj|BAK12903.1| 30S ribosomal protein S11 RpsK [Pantoea ananatis AJ13355]
Length = 129
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AHV ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRARKRVRKQVSDGVAHVHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ +++G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKDYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|209527119|ref|ZP_03275633.1| ribosomal protein S11 [Arthrospira maxima CS-328]
gi|284053325|ref|ZP_06383535.1| 30S ribosomal protein S11 [Arthrospira platensis str. Paraca]
gi|209492459|gb|EDZ92800.1| ribosomal protein S11 [Arthrospira maxima CS-328]
gi|291567807|dbj|BAI90079.1| 30S ribosomal protein S11 [Arthrospira platensis NIES-39]
Length = 130
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + ++++N+ +G A++ STFNNT ++ITD +G I+W+S GF G++K +
Sbjct: 1 MARQTKKTGPKKQKRNVPNGVAYIQSTFNNTIVSITDQNGEVISWASAGSTGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + +A + GM +EV VSG G+GR++A+RAL+ G I I DVT I HN
Sbjct: 61 PFAAQTAAESAGRRASDQGMRQIEVMVSGPGSGRETAIRALQGAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|299135234|ref|ZP_07028425.1| 30S ribosomal protein S11 [Afipia sp. 1NLS2]
gi|298590211|gb|EFI50415.1| 30S ribosomal protein S11 [Afipia sp. 1NLS2]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MAKEAGRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|16766706|ref|NP_462321.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56415336|ref|YP_152411.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181922|ref|YP_218339.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616443|ref|YP_001590407.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168264702|ref|ZP_02686675.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168468026|ref|ZP_02701863.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443473|ref|YP_002042668.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448753|ref|YP_002047441.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472213|ref|ZP_03078197.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194735800|ref|YP_002116360.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197247558|ref|YP_002148337.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197261685|ref|ZP_03161759.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198246176|ref|YP_002217380.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200388860|ref|ZP_03215472.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204931410|ref|ZP_03222079.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205354955|ref|YP_002228756.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|224585212|ref|YP_002639011.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238913868|ref|ZP_04657705.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|17865715|sp|O54296|RS11_SALTY RecName: Full=30S ribosomal protein S11
gi|62287385|sp|Q5PK08|RS11_SALPA RecName: Full=30S ribosomal protein S11
gi|75480369|sp|Q57J54|RS11_SALCH RecName: Full=30S ribosomal protein S11
gi|189040433|sp|A9N8C1|RS11_SALPB RecName: Full=30S ribosomal protein S11
gi|226708409|sp|B5F7S3|RS11_SALA4 RecName: Full=30S ribosomal protein S11
gi|226708410|sp|B5FJJ2|RS11_SALDC RecName: Full=30S ribosomal protein S11
gi|226708411|sp|B5RH38|RS11_SALG2 RecName: Full=30S ribosomal protein S11
gi|226708412|sp|B4TJY7|RS11_SALHS RecName: Full=30S ribosomal protein S11
gi|226708413|sp|B4SUR8|RS11_SALNS RecName: Full=30S ribosomal protein S11
gi|226708414|sp|B4TXC0|RS11_SALSV RecName: Full=30S ribosomal protein S11
gi|254811041|sp|C0PZW0|RS11_SALPC RecName: Full=30S ribosomal protein S11
gi|16421973|gb|AAL22280.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56129593|gb|AAV79099.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129555|gb|AAX67258.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365807|gb|ABX69575.1| hypothetical protein SPAB_04258 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402136|gb|ACF62358.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194407057|gb|ACF67276.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458577|gb|EDX47416.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194711302|gb|ACF90523.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195628907|gb|EDX48317.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197211261|gb|ACH48658.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197239940|gb|EDY22560.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197940692|gb|ACH78025.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605958|gb|EDZ04503.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204319838|gb|EDZ05048.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205274736|emb|CAR39792.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205346874|gb|EDZ33505.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224469740|gb|ACN47570.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|267995626|gb|ACY90511.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|312914440|dbj|BAJ38414.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087862|emb|CBY97625.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322615042|gb|EFY11966.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617329|gb|EFY14230.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625551|gb|EFY22376.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626393|gb|EFY23202.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632095|gb|EFY28848.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635026|gb|EFY31749.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643273|gb|EFY39840.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646643|gb|EFY43150.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649989|gb|EFY46408.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652706|gb|EFY49046.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659537|gb|EFY55781.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665521|gb|EFY61708.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670415|gb|EFY66554.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670488|gb|EFY66622.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675064|gb|EFY71147.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681601|gb|EFY77630.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685945|gb|EFY81934.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716408|gb|EFZ07979.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323131775|gb|ADX19205.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323195815|gb|EFZ80988.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196429|gb|EFZ81580.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202332|gb|EFZ87377.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207319|gb|EFZ92269.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211245|gb|EFZ96090.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216046|gb|EGA00777.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223463|gb|EGA07791.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226807|gb|EGA10997.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231831|gb|EGA15941.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233216|gb|EGA17311.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237283|gb|EGA21348.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245518|gb|EGA29517.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249024|gb|EGA32946.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250647|gb|EGA34528.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256876|gb|EGA40590.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263025|gb|EGA46572.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266025|gb|EGA49520.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272782|gb|EGA56185.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625161|gb|EGE31506.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630104|gb|EGE36447.1| ribosomal protein S11 [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|37528521|ref|NP_931866.1| 30S ribosomal protein S11 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|50122928|ref|YP_052095.1| 30S ribosomal protein S11 [Pectobacterium atrosepticum SCRI1043]
gi|152972205|ref|YP_001337351.1| 30S ribosomal protein S11 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|183600729|ref|ZP_02962222.1| hypothetical protein PROSTU_04325 [Providencia stuartii ATCC 25827]
gi|197287091|ref|YP_002152963.1| 30S ribosomal protein S11 [Proteus mirabilis HI4320]
gi|226329503|ref|ZP_03805021.1| hypothetical protein PROPEN_03412 [Proteus penneri ATCC 35198]
gi|227115249|ref|ZP_03828905.1| 30S ribosomal protein S11 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227328926|ref|ZP_03832950.1| 30S ribosomal protein S11 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|227354913|ref|ZP_03839327.1| ribosomal protein S11 [Proteus mirabilis ATCC 29906]
gi|238896794|ref|YP_002921539.1| 30S ribosomal protein S11 [Klebsiella pneumoniae NTUH-K2044]
gi|242237882|ref|YP_002986063.1| ribosomal protein S11 [Dickeya dadantii Ech703]
gi|253690160|ref|YP_003019350.1| ribosomal protein S11 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|253991666|ref|YP_003043022.1| 30S ribosomal protein S11 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|261823209|ref|YP_003261315.1| 30S ribosomal protein S11 [Pectobacterium wasabiae WPP163]
gi|268593564|ref|ZP_06127785.1| 30S ribosomal protein S11 [Providencia rettgeri DSM 1131]
gi|271502223|ref|YP_003335249.1| 30S ribosomal protein S11 [Dickeya dadantii Ech586]
gi|290477170|ref|YP_003470085.1| 30S ribosomal subunit protein S11 [Xenorhabdus bovienii SS-2004]
gi|300721389|ref|YP_003710660.1| 30S ribosomal subunit protein S11 [Xenorhabdus nematophila ATCC
19061]
gi|307132816|ref|YP_003884832.1| 30S ribosomal subunit protein S11 [Dickeya dadantii 3937]
gi|330002272|ref|ZP_08304266.1| 30S ribosomal protein S11 [Klebsiella sp. MS 92-3]
gi|59798689|sp|Q6CZZ3|RS11_ERWCT RecName: Full=30S ribosomal protein S11
gi|59798821|sp|Q7MYH3|RS11_PHOLL RecName: Full=30S ribosomal protein S11
gi|166231817|sp|A6TEV0|RS11_KLEP7 RecName: Full=30S ribosomal protein S11
gi|226708402|sp|B4F1K7|RS11_PROMH RecName: Full=30S ribosomal protein S11
gi|259494630|sp|C6DFS5|RS11_PECCP RecName: Full=30S ribosomal protein S11
gi|36787959|emb|CAE17076.1| 30S ribosomal protein S11 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|49613454|emb|CAG76905.1| 30S ribosomal subunit protein S11 [Pectobacterium atrosepticum
SCRI1043]
gi|150957054|gb|ABR79084.1| 30S ribosomal protein S11 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|188019709|gb|EDU57749.1| hypothetical protein PROSTU_04325 [Providencia stuartii ATCC 25827]
gi|194684578|emb|CAR46426.1| 30S ribosomal protein S11 [Proteus mirabilis HI4320]
gi|225202689|gb|EEG85043.1| hypothetical protein PROPEN_03412 [Proteus penneri ATCC 35198]
gi|227164995|gb|EEI49834.1| ribosomal protein S11 [Proteus mirabilis ATCC 29906]
gi|238549121|dbj|BAH65472.1| 30S ribosomal protein S11 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|242129939|gb|ACS84241.1| ribosomal protein S11 [Dickeya dadantii Ech703]
gi|251756738|gb|ACT14814.1| ribosomal protein S11 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|253783116|emb|CAQ86281.1| 30s ribosomal subunit protein s11 [Photorhabdus asymbiotica]
gi|261607222|gb|ACX89708.1| 30S ribosomal protein S11 [Pectobacterium wasabiae WPP163]
gi|270345778|gb|ACZ78543.1| 30S ribosomal protein S11 [Dickeya dadantii Ech586]
gi|284006140|emb|CBA71382.1| 30S ribosomal protein S11 [Arsenophonus nasoniae]
gi|289176518|emb|CBJ83327.1| 30S ribosomal subunit protein S11 [Xenorhabdus bovienii SS-2004]
gi|291310841|gb|EFE51294.1| 30S ribosomal protein S11 [Providencia rettgeri DSM 1131]
gi|297627877|emb|CBJ88423.1| 30S ribosomal subunit protein S11 [Xenorhabdus nematophila ATCC
19061]
gi|306530345|gb|ADN00276.1| 30S ribosomal subunit protein S11 [Dickeya dadantii 3937]
gi|328537345|gb|EGF63595.1| 30S ribosomal protein S11 [Klebsiella sp. MS 92-3]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|157372754|ref|YP_001480743.1| 30S ribosomal protein S11 [Serratia proteamaculans 568]
gi|270264350|ref|ZP_06192616.1| 30S ribosomal protein S11 [Serratia odorifera 4Rx13]
gi|166991582|sp|A8GKH5|RS11_SERP5 RecName: Full=30S ribosomal protein S11
gi|157324518|gb|ABV43615.1| ribosomal protein S11 [Serratia proteamaculans 568]
gi|270041486|gb|EFA14584.1| 30S ribosomal protein S11 [Serratia odorifera 4Rx13]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AHV ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVRTRKRVRKQVSDGVAHVHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|91791562|ref|YP_561213.1| 30S ribosomal protein S11 [Shewanella denitrificans OS217]
gi|122969075|sp|Q12ST6|RS11_SHEDO RecName: Full=30S ribosomal protein S11
gi|91713564|gb|ABE53490.1| SSU ribosomal protein S11P [Shewanella denitrificans OS217]
Length = 130
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL A+G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGIAAQDYGLKNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|253580646|ref|ZP_04857910.1| 30S ribosomal protein S11 [Ruminococcus sp. 5_1_39B_FAA]
gi|251848017|gb|EES75983.1| 30S ribosomal protein S11 [Ruminococcus sp. 5_1_39BFAA]
Length = 131
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKVTKKATAKRRVKKNVEHGQAHIQSSFNNTIVTLTDNEGNALSWASAGGLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + A HG+ +++V V G G+GR++A+RAL+A G + SI DVT + H
Sbjct: 61 TPYAAQMAAETATKAALIHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|149184337|ref|ZP_01862655.1| 30S ribosomal protein S11 [Erythrobacter sp. SD-21]
gi|148831657|gb|EDL50090.1| 30S ribosomal protein S11 [Erythrobacter sp. SD-21]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 98/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R+R R++KNI SG AH+ ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPGRVRRRDKKNISSGVAHINASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALR L A+GFTI SI DVT I HNG
Sbjct: 61 YAAQVAADDAGRKAAEHGVRTLEVEVKGPGSGRESALRGLAAVGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|114330596|ref|YP_746818.1| 30S ribosomal protein S11 [Nitrosomonas eutropha C91]
gi|122314410|sp|Q0AIH3|RS11_NITEC RecName: Full=30S ribosomal protein S11
gi|114307610|gb|ABI58853.1| SSU ribosomal protein S11P [Nitrosomonas eutropha C91]
Length = 129
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P + R + +KNI+ G AH+ ++FNNT +TI+D GN ++W++ VGF GSRK++P
Sbjct: 1 MIKPPLKSRKKIKKNIIEGVAHIHASFNNTIVTISDRQGNALSWATSGGVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +LE++V G G GRDSA+RAL A GF I SI DVT + HNG
Sbjct: 61 FAAQVAAEHAGRAALEYGVKNLEIRVKGPGPGRDSAVRALNATGFKITSITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|50086192|ref|YP_047702.1| 30S ribosomal protein S11 [Acinetobacter sp. ADP1]
gi|169632373|ref|YP_001706109.1| 30S ribosomal protein S11 [Acinetobacter baumannii SDF]
gi|169794617|ref|YP_001712410.1| 30S ribosomal protein S11 [Acinetobacter baumannii AYE]
gi|184159575|ref|YP_001847914.1| 30S ribosomal protein S11 [Acinetobacter baumannii ACICU]
gi|213158812|ref|YP_002320810.1| ribosomal protein S11 [Acinetobacter baumannii AB0057]
gi|215482206|ref|YP_002324388.1| 30S ribosomal protein S11 (BS11) [Acinetobacter baumannii
AB307-0294]
gi|239503211|ref|ZP_04662521.1| 30S ribosomal protein S11 [Acinetobacter baumannii AB900]
gi|255319792|ref|ZP_05360997.1| 30S ribosomal protein S11 [Acinetobacter radioresistens SK82]
gi|260549817|ref|ZP_05824033.1| ribosomal protein S11 [Acinetobacter sp. RUH2624]
gi|260557050|ref|ZP_05829267.1| 30S ribosomal protein S11 [Acinetobacter baumannii ATCC 19606]
gi|262280202|ref|ZP_06057986.1| 30S ribosomal protein S11 [Acinetobacter calcoaceticus RUH2202]
gi|262370555|ref|ZP_06063880.1| 30S ribosomal protein S11 [Acinetobacter johnsonii SH046]
gi|262373498|ref|ZP_06066776.1| 30S ribosomal protein S11 [Acinetobacter junii SH205]
gi|262380325|ref|ZP_06073479.1| 30S ribosomal protein S11 [Acinetobacter radioresistens SH164]
gi|293610847|ref|ZP_06693147.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|294839724|ref|ZP_06784407.1| 30S ribosomal protein S11 [Acinetobacter sp. 6013113]
gi|294842676|ref|ZP_06787359.1| 30S ribosomal protein S11 [Acinetobacter sp. 6014059]
gi|294860402|ref|ZP_06798171.1| 30S ribosomal protein S11 [Acinetobacter sp. 6013150]
gi|299768689|ref|YP_003730715.1| 30S ribosomal protein S11 [Acinetobacter sp. DR1]
gi|301345033|ref|ZP_07225774.1| 30S ribosomal protein S11 [Acinetobacter baumannii AB056]
gi|301512036|ref|ZP_07237273.1| 30S ribosomal protein S11 [Acinetobacter baumannii AB058]
gi|301595207|ref|ZP_07240215.1| 30S ribosomal protein S11 [Acinetobacter baumannii AB059]
gi|59798697|sp|Q6F7T5|RS11_ACIAD RecName: Full=30S ribosomal protein S11
gi|152060565|sp|A3M961|RS11_ACIBT RecName: Full=30S ribosomal protein S11
gi|226708316|sp|B7GW25|RS11_ACIB3 RecName: Full=30S ribosomal protein S11
gi|226708317|sp|B7IA16|RS11_ACIB5 RecName: Full=30S ribosomal protein S11
gi|226708318|sp|B2HZ85|RS11_ACIBC RecName: Full=30S ribosomal protein S11
gi|226708319|sp|B0VQU1|RS11_ACIBS RecName: Full=30S ribosomal protein S11
gi|226708320|sp|B0V6U5|RS11_ACIBY RecName: Full=30S ribosomal protein S11
gi|49532168|emb|CAG69880.1| 30S ribosomal protein S11 [Acinetobacter sp. ADP1]
gi|169147544|emb|CAM85405.1| 30S ribosomal protein S11 [Acinetobacter baumannii AYE]
gi|169151165|emb|CAO99837.1| 30S ribosomal protein S11 [Acinetobacter baumannii]
gi|183211169|gb|ACC58567.1| 30S ribosomal protein S11 [Acinetobacter baumannii ACICU]
gi|193078464|gb|ABO13455.2| 30S ribosomal protein S11 [Acinetobacter baumannii ATCC 17978]
gi|213057972|gb|ACJ42874.1| ribosomal protein S11 [Acinetobacter baumannii AB0057]
gi|213986379|gb|ACJ56678.1| 30S ribosomal protein S11 (BS11) [Acinetobacter baumannii
AB307-0294]
gi|255303111|gb|EET82323.1| 30S ribosomal protein S11 [Acinetobacter radioresistens SK82]
gi|260407067|gb|EEX00544.1| ribosomal protein S11 [Acinetobacter sp. RUH2624]
gi|260409656|gb|EEX02957.1| 30S ribosomal protein S11 [Acinetobacter baumannii ATCC 19606]
gi|262257980|gb|EEY76714.1| 30S ribosomal protein S11 [Acinetobacter calcoaceticus RUH2202]
gi|262297771|gb|EEY85686.1| 30S ribosomal protein S11 [Acinetobacter radioresistens SH164]
gi|262311251|gb|EEY92337.1| 30S ribosomal protein S11 [Acinetobacter junii SH205]
gi|262314355|gb|EEY95397.1| 30S ribosomal protein S11 [Acinetobacter johnsonii SH046]
gi|292827191|gb|EFF85556.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|298698777|gb|ADI89342.1| 30S ribosomal protein S11 [Acinetobacter sp. DR1]
gi|322509485|gb|ADX04939.1| 30S ribosomal protein S11 [Acinetobacter baumannii 1656-2]
gi|323519506|gb|ADX93887.1| 30S ribosomal protein S11 [Acinetobacter baumannii TCDC-AB0715]
gi|325123581|gb|ADY83104.1| 30S ribosomal protein S11 [Acinetobacter calcoaceticus PHEA-2]
Length = 128
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + + + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAK-DTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A ++G+ +L+V V G G GR+SA+RAL A+G+ I SI DVT I HNG
Sbjct: 60 FAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|163739472|ref|ZP_02146882.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
gi|163740265|ref|ZP_02147659.1| 30S ribosomal protein S11 [Phaeobacter gallaeciensis 2.10]
gi|161386123|gb|EDQ10498.1| 30S ribosomal protein S11 [Phaeobacter gallaeciensis 2.10]
gi|161387225|gb|EDQ11584.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
Length = 129
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ERKNI SG AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRTKRKERKNIASGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|332186888|ref|ZP_08388630.1| 30S ribosomal protein S11 [Sphingomonas sp. S17]
gi|332013221|gb|EGI55284.1| 30S ribosomal protein S11 [Sphingomonas sp. S17]
Length = 129
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RIR RERKNI +G AHV ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPQRIRRRERKNITAGVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D KA HG+ +LEV+V G G+GR+SALRAL+A+GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFQITSIRDVTSIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|254511417|ref|ZP_05123484.1| ribosomal protein S11 [Rhodobacteraceae bacterium KLH11]
gi|221535128|gb|EEE38116.1| ribosomal protein S11 [Rhodobacteraceae bacterium KLH11]
Length = 129
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI SG AHV STFNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRVKRKERKNIASGVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|85060233|ref|YP_455935.1| 30S ribosomal protein S11 [Sodalis glossinidius str. 'morsitans']
gi|123752576|sp|Q2NQP5|RS11_SODGM RecName: Full=30S ribosomal protein S11
gi|84780753|dbj|BAE75530.1| 30S ribosomal protein S11 [Sodalis glossinidius str. 'morsitans']
Length = 129
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVKKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVVVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|118579143|ref|YP_900393.1| 30S ribosomal protein S11 [Pelobacter propionicus DSM 2379]
gi|152060803|sp|A1ALW5|RS11_PELPD RecName: Full=30S ribosomal protein S11
gi|118501853|gb|ABK98335.1| SSU ribosomal protein S11P [Pelobacter propionicus DSM 2379]
Length = 131
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 74/131 (56%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M ++ + RERKN+ +G AH+ +TFNNT ITI D GN +AWS+ GF GSRK+
Sbjct: 1 MASPAKKVVRKKRERKNVTNGVAHIHATFNNTMITIADTAGNVLAWSTSGAKGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA +DC+ KAQ HG+ ++EV V G G+GR+SALRAL+A GF I I DVT I H
Sbjct: 61 TPFAAQVAAEDCAKKAQEHGLRNVEVYVKGPGSGRESALRALQAAGFNISFIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|237728632|ref|ZP_04559113.1| 30S ribosomal subunit protein S11 [Citrobacter sp. 30_2]
gi|283835714|ref|ZP_06355455.1| hypothetical protein CIT292_10107 [Citrobacter youngae ATCC 29220]
gi|296105005|ref|YP_003615151.1| 30S ribosomal protein S11 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|226909254|gb|EEH95172.1| 30S ribosomal subunit protein S11 [Citrobacter sp. 30_2]
gi|291068394|gb|EFE06503.1| 30S ribosomal protein S11 [Citrobacter youngae ATCC 29220]
gi|295059464|gb|ADF64202.1| 30S ribosomal protein S11 [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 129
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|126724891|ref|ZP_01740734.1| 30S ribosomal protein S11 [Rhodobacterales bacterium HTCC2150]
gi|126706055|gb|EBA05145.1| 30S ribosomal protein S11 [Rhodobacterales bacterium HTCC2150]
Length = 129
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + +ERKNI +G AH+ S+FNNT+I I+D GN I+WSS GF GSRK++P
Sbjct: 1 MARDKVRAKKKERKNIAAGVAHINSSFNNTKILISDVQGNAISWSSSGTCGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL AIG + SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAIGLNVTSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|317494319|ref|ZP_07952733.1| 30S ribosomal protein S11 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917569|gb|EFV38914.1| 30S ribosomal protein S11 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 129
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AHV ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHVHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|332178479|gb|AEE14168.1| 30S ribosomal protein S11 [Thermodesulfobium narugense DSM 14796]
Length = 134
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/128 (47%), Positives = 89/128 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++ +R++ +E+KN++ G AH+ STFNNT I I+D G I+W S GF G++K +P+
Sbjct: 7 SQTQTRVKKKEKKNVLYGIAHIHSTFNNTIIAISDKQGALISWGSGGTAGFKGTKKGTPY 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + KA +HGM ++V V G G GR++A+R+L A G +I I DVT I HNGC
Sbjct: 67 AAQLAAEVVAKKAMDHGMKQVDVYVKGPGPGRETAIRSLLAAGLSIEMIKDVTPIPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|239996314|ref|ZP_04716838.1| 30S ribosomal protein S11 [Alteromonas macleodii ATCC 27126]
gi|332142183|ref|YP_004427921.1| 30S ribosomal protein S11 [Alteromonas macleodii str. 'Deep
ecotype']
gi|226708324|sp|B4RT51|RS11_ALTMD RecName: Full=30S ribosomal protein S11
gi|327552205|gb|AEA98923.1| 30S ribosomal protein S11 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 130
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+P+R R R ++ + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++
Sbjct: 1 MAKAPARSTRKRAKRQVADGMAHIHASFNNTIVTITDRSGNALAWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ +G+ +LEV V G G GR+SA+RAL A G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQEYGLKNLEVFVKGPGPGRESAIRALNATGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|126737031|ref|ZP_01752766.1| 30S ribosomal protein S11 [Roseobacter sp. SK209-2-6]
gi|126721616|gb|EBA18319.1| 30S ribosomal protein S11 [Roseobacter sp. SK209-2-6]
Length = 129
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRVKKKERKNIATGVAHVNSSFNNTKILISDVQGNAISWSSAGSMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL AIGF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGSGRESALRALAAIGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|127511115|ref|YP_001092312.1| 30S ribosomal protein S11 [Shewanella loihica PV-4]
gi|152060820|sp|A3Q9A5|RS11_SHELP RecName: Full=30S ribosomal protein S11
gi|126636410|gb|ABO22053.1| SSU ribosomal protein S11P [Shewanella loihica PV-4]
Length = 130
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSTRKRVRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL A+G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGVKNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|157960036|ref|YP_001500070.1| 30S ribosomal protein S11 [Shewanella pealeana ATCC 700345]
gi|167626017|ref|YP_001676311.1| 30S ribosomal protein S11 [Shewanella halifaxensis HAW-EB4]
gi|212634852|ref|YP_002311377.1| 30S ribosomal protein S11 [Shewanella piezotolerans WP3]
gi|189040436|sp|B0TLZ0|RS11_SHEHH RecName: Full=30S ribosomal protein S11
gi|189040437|sp|A8GYZ8|RS11_SHEPA RecName: Full=30S ribosomal protein S11
gi|226708415|sp|B8CNF6|RS11_SHEPW RecName: Full=30S ribosomal protein S11
gi|157845036|gb|ABV85535.1| ribosomal protein S11 [Shewanella pealeana ATCC 700345]
gi|167356039|gb|ABZ78652.1| ribosomal protein S11 [Shewanella halifaxensis HAW-EB4]
gi|212556336|gb|ACJ28790.1| Ribosomal protein S11 [Shewanella piezotolerans WP3]
Length = 130
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL ++G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGTAAQDYGVKNLEVFVKGPGPGRESAIRALNSVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|281180332|dbj|BAI56662.1| 30S ribosomal protein S11 [Escherichia coli SE15]
Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADVVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|119484810|ref|ZP_01619292.1| 30S ribosomal protein S11 [Lyngbya sp. PCC 8106]
gi|119457628|gb|EAW38752.1| 30S ribosomal protein S11 [Lyngbya sp. PCC 8106]
Length = 130
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + ++++N+ +G A++ STFNNT +TITDP+G I+W+S GF G++K +
Sbjct: 1 MAKPSKKSGTKKQKRNVPNGVAYIQSTFNNTIVTITDPNGEVISWASAGSTGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + +A + GM +EV VSG GAGR++A+RAL+ G I I D+T I HN
Sbjct: 61 PFAAQTAAESAGRRANDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDITPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 EDL933]
gi|15833416|ref|NP_312189.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. Sakai]
gi|16131176|ref|NP_417756.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. MG1655]
gi|24114575|ref|NP_709085.1| 30S ribosomal protein S11 [Shigella flexneri 2a str. 301]
gi|26249882|ref|NP_755922.1| 30S ribosomal protein S11 [Escherichia coli CFT073]
gi|30065402|ref|NP_839573.1| 30S ribosomal protein S11 [Shigella flexneri 2a str. 2457T]
gi|74313816|ref|YP_312235.1| 30S ribosomal protein S11 [Shigella sonnei Ss046]
gi|82545660|ref|YP_409607.1| 30S ribosomal protein S11 [Shigella boydii Sb227]
gi|82778593|ref|YP_404942.1| 30S ribosomal protein S11 [Shigella dysenteriae Sd197]
gi|89110713|ref|AP_004493.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. W3110]
gi|91212724|ref|YP_542710.1| 30S ribosomal protein S11 [Escherichia coli UTI89]
gi|110643536|ref|YP_671266.1| 30S ribosomal protein S11 [Escherichia coli 536]
gi|110807145|ref|YP_690665.1| 30S ribosomal protein S11 [Shigella flexneri 5 str. 8401]
gi|117625579|ref|YP_858902.1| 30S ribosomal protein S11 [Escherichia coli APEC O1]
gi|157156126|ref|YP_001464765.1| 30S ribosomal protein S11 [Escherichia coli E24377A]
gi|157162771|ref|YP_001460089.1| 30S ribosomal protein S11 [Escherichia coli HS]
gi|161506030|ref|YP_001573142.1| 30S ribosomal protein S11 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|168752254|ref|ZP_02777276.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4113]
gi|168758525|ref|ZP_02783532.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4401]
gi|168764980|ref|ZP_02789987.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4501]
gi|168769159|ref|ZP_02794166.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4486]
gi|168777845|ref|ZP_02802852.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4196]
gi|168783865|ref|ZP_02808872.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4076]
gi|168786187|ref|ZP_02811194.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC869]
gi|168802726|ref|ZP_02827733.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC508]
gi|170018467|ref|YP_001723421.1| 30S ribosomal protein S11 [Escherichia coli ATCC 8739]
gi|170082817|ref|YP_001732137.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. DH10B]
gi|170679818|ref|YP_001745559.1| 30S ribosomal protein S11 [Escherichia coli SMS-3-5]
gi|170769491|ref|ZP_02903944.1| ribosomal protein S11 [Escherichia albertii TW07627]
gi|187730089|ref|YP_001881982.1| 30S ribosomal protein S11 [Shigella boydii CDC 3083-94]
gi|188496068|ref|ZP_03003338.1| ribosomal protein S11 [Escherichia coli 53638]
gi|191169297|ref|ZP_03031046.1| ribosomal protein S11 [Escherichia coli B7A]
gi|191174451|ref|ZP_03035952.1| ribosomal protein S11 [Escherichia coli F11]
gi|193066499|ref|ZP_03047543.1| ribosomal protein S11 [Escherichia coli E22]
gi|193071536|ref|ZP_03052445.1| ribosomal protein S11 [Escherichia coli E110019]
gi|194430291|ref|ZP_03062786.1| ribosomal protein S11 [Escherichia coli B171]
gi|194435074|ref|ZP_03067312.1| ribosomal protein S11 [Shigella dysenteriae 1012]
gi|194440011|ref|ZP_03072069.1| ribosomal protein S11 [Escherichia coli 101-1]
gi|195939845|ref|ZP_03085227.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. EC4024]
gi|208808796|ref|ZP_03251133.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4206]
gi|208811888|ref|ZP_03253217.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4045]
gi|208818549|ref|ZP_03258869.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4042]
gi|209398081|ref|YP_002272753.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4115]
gi|209920763|ref|YP_002294847.1| 30S ribosomal protein S11 [Escherichia coli SE11]
gi|215488597|ref|YP_002331028.1| 30S ribosomal protein S11 [Escherichia coli O127:H6 str. E2348/69]
gi|217324533|ref|ZP_03440617.1| ribosomal protein S11 [Escherichia coli O157:H7 str. TW14588]
gi|218550573|ref|YP_002384364.1| 30S ribosomal protein S11 [Escherichia fergusonii ATCC 35469]
gi|218555855|ref|YP_002388768.1| 30S ribosomal protein S11 [Escherichia coli IAI1]
gi|218560359|ref|YP_002393272.1| 30S ribosomal protein S11 [Escherichia coli S88]
gi|218691584|ref|YP_002399796.1| 30S ribosomal protein S11 [Escherichia coli ED1a]
gi|218696990|ref|YP_002404657.1| 30S ribosomal protein S11 [Escherichia coli 55989]
gi|218702060|ref|YP_002409689.1| 30S ribosomal protein S11 [Escherichia coli IAI39]
gi|218706905|ref|YP_002414424.1| 30S ribosomal protein S11 [Escherichia coli UMN026]
gi|227883429|ref|ZP_04001234.1| 30S ribosomal protein S11 [Escherichia coli 83972]
gi|237703027|ref|ZP_04533508.1| 30S ribosomal subunit protein S11 [Escherichia sp. 3_2_53FAA]
gi|238902388|ref|YP_002928184.1| 30S ribosomal subunit protein S11 [Escherichia coli BW2952]
gi|253771879|ref|YP_003034710.1| 30S ribosomal protein S11 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038458|ref|ZP_04872514.1| ribosomal protein S11 [Escherichia sp. 1_1_43]
gi|254163225|ref|YP_003046333.1| 30S ribosomal protein S11 [Escherichia coli B str. REL606]
gi|254795234|ref|YP_003080071.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. TW14359]
gi|256020656|ref|ZP_05434521.1| 30S ribosomal protein S11 [Shigella sp. D9]
gi|256025975|ref|ZP_05439840.1| 30S ribosomal protein S11 [Escherichia sp. 4_1_40B]
gi|260846095|ref|YP_003223873.1| 30S ribosomal subunit protein S11 [Escherichia coli O103:H2 str.
12009]
gi|260857418|ref|YP_003231309.1| 30S ribosomal subunit protein S11 [Escherichia coli O26:H11 str.
11368]
gi|260870040|ref|YP_003236442.1| 30S ribosomal subunit protein S11 [Escherichia coli O111:H- str.
11128]
gi|261224602|ref|ZP_05938883.1| 30S ribosomal subunit protein S11 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254504|ref|ZP_05947037.1| 30S ribosomal subunit protein S11 [Escherichia coli O157:H7 str.
FRIK966]
gi|283788067|ref|YP_003367932.1| 30S ribosomal subunit protein S11 [Citrobacter rodentium ICC168]
gi|291284655|ref|YP_003501473.1| 30S ribosomal protein S11 [Escherichia coli O55:H7 str. CB9615]
gi|293406894|ref|ZP_06650818.1| 30S ribosomal protein S11 [Escherichia coli FVEC1412]
gi|293412716|ref|ZP_06655384.1| 30S ribosomal protein S11 [Escherichia coli B354]
gi|293416716|ref|ZP_06659353.1| 30S ribosomal protein S11 [Escherichia coli B185]
gi|293453616|ref|ZP_06664035.1| 30S ribosomal protein S11 [Escherichia coli B088]
gi|294638031|ref|ZP_06716291.1| 30S ribosomal protein S11 [Edwardsiella tarda ATCC 23685]
gi|298382635|ref|ZP_06992230.1| 30S ribosomal protein S11 [Escherichia coli FVEC1302]
gi|300815492|ref|ZP_07095717.1| 30S ribosomal protein S11 [Escherichia coli MS 107-1]
gi|300822899|ref|ZP_07103035.1| 30S ribosomal protein S11 [Escherichia coli MS 119-7]
gi|300896646|ref|ZP_07115162.1| 30S ribosomal protein S11 [Escherichia coli MS 198-1]
gi|300903546|ref|ZP_07121468.1| 30S ribosomal protein S11 [Escherichia coli MS 84-1]
gi|300918272|ref|ZP_07134876.1| 30S ribosomal protein S11 [Escherichia coli MS 115-1]
gi|300921893|ref|ZP_07138049.1| 30S ribosomal protein S11 [Escherichia coli MS 182-1]
gi|300932191|ref|ZP_07147470.1| 30S ribosomal protein S11 [Escherichia coli MS 187-1]
gi|300935296|ref|ZP_07150306.1| 30S ribosomal protein S11 [Escherichia coli MS 21-1]
gi|300946520|ref|ZP_07160785.1| 30S ribosomal protein S11 [Escherichia coli MS 116-1]
gi|300954828|ref|ZP_07167254.1| 30S ribosomal protein S11 [Escherichia coli MS 175-1]
gi|300973977|ref|ZP_07172384.1| 30S ribosomal protein S11 [Escherichia coli MS 200-1]
gi|300979870|ref|ZP_07174746.1| 30S ribosomal protein S11 [Escherichia coli MS 45-1]
gi|301018837|ref|ZP_07183081.1| 30S ribosomal protein S11 [Escherichia coli MS 69-1]
gi|301021163|ref|ZP_07185201.1| 30S ribosomal protein S11 [Escherichia coli MS 196-1]
gi|301046069|ref|ZP_07193247.1| 30S ribosomal protein S11 [Escherichia coli MS 185-1]
gi|301305507|ref|ZP_07211599.1| 30S ribosomal protein S11 [Escherichia coli MS 124-1]
gi|301325135|ref|ZP_07218669.1| 30S ribosomal protein S11 [Escherichia coli MS 78-1]
gi|301643882|ref|ZP_07243913.1| 30S ribosomal protein S11 [Escherichia coli MS 146-1]
gi|306816360|ref|ZP_07450498.1| 30S ribosomal protein S11 [Escherichia coli NC101]
gi|307139980|ref|ZP_07499336.1| 30S ribosomal protein S11 [Escherichia coli H736]
gi|307315124|ref|ZP_07594707.1| 30S ribosomal protein S11 [Escherichia coli W]
gi|309785619|ref|ZP_07680250.1| ribosomal S11 family protein [Shigella dysenteriae 1617]
gi|309794573|ref|ZP_07688995.1| 30S ribosomal protein S11 [Escherichia coli MS 145-7]
gi|311277748|ref|YP_003939979.1| 30S ribosomal protein S11 [Enterobacter cloacae SCF1]
gi|312968378|ref|ZP_07782588.1| ribosomal S11 family protein [Escherichia coli 2362-75]
gi|312972442|ref|ZP_07786616.1| ribosomal S11 family protein [Escherichia coli 1827-70]
gi|331643993|ref|ZP_08345122.1| 30S ribosomal protein S11 [Escherichia coli H736]
gi|331649094|ref|ZP_08350180.1| 30S ribosomal protein S11 [Escherichia coli M605]
gi|331654890|ref|ZP_08355889.1| 30S ribosomal protein S11 [Escherichia coli M718]
gi|331659587|ref|ZP_08360525.1| 30S ribosomal protein S11 [Escherichia coli TA206]
gi|331664910|ref|ZP_08365811.1| 30S ribosomal protein S11 [Escherichia coli TA143]
gi|331670126|ref|ZP_08370965.1| 30S ribosomal protein S11 [Escherichia coli TA271]
gi|331674803|ref|ZP_08375560.1| 30S ribosomal protein S11 [Escherichia coli TA280]
gi|331679366|ref|ZP_08380036.1| 30S ribosomal protein S11 [Escherichia coli H591]
gi|331684939|ref|ZP_08385525.1| 30S ribosomal protein S11 [Escherichia coli H299]
gi|67472358|sp|P0A7R9|RS11_ECOLI RecName: Full=30S ribosomal protein S11
gi|67472359|sp|P0A7S0|RS11_ECOL6 RecName: Full=30S ribosomal protein S11
gi|67472360|sp|P0A7S1|RS11_ECO57 RecName: Full=30S ribosomal protein S11
gi|67472361|sp|P0A7S2|RS11_SHIFL RecName: Full=30S ribosomal protein S11
gi|91207677|sp|Q31VX9|RS11_SHIBS RecName: Full=30S ribosomal protein S11
gi|91207678|sp|Q32B54|RS11_SHIDS RecName: Full=30S ribosomal protein S11
gi|91207679|sp|Q3YWW2|RS11_SHISS RecName: Full=30S ribosomal protein S11
gi|123342434|sp|Q0T005|RS11_SHIF8 RecName: Full=30S ribosomal protein S11
gi|123343549|sp|Q0TCG4|RS11_ECOL5 RecName: Full=30S ribosomal protein S11
gi|123387795|sp|Q1R635|RS11_ECOUT RecName: Full=30S ribosomal protein S11
gi|152060588|sp|A1AGI8|RS11_ECOK1 RecName: Full=30S ribosomal protein S11
gi|166991577|sp|A7ZSI6|RS11_ECO24 RecName: Full=30S ribosomal protein S11
gi|166991578|sp|A8A5A2|RS11_ECOHS RecName: Full=30S ribosomal protein S11
gi|189040414|sp|B1IQ02|RS11_ECOLC RecName: Full=30S ribosomal protein S11
gi|189040432|sp|A9MN70|RS11_SALAR RecName: Full=30S ribosomal protein S11
gi|226708363|sp|B7MCR3|RS11_ECO45 RecName: Full=30S ribosomal protein S11
gi|226708364|sp|B5YT16|RS11_ECO5E RecName: Full=30S ribosomal protein S11
gi|226708365|sp|B7NLL7|RS11_ECO7I RecName: Full=30S ribosomal protein S11
gi|226708366|sp|B7M103|RS11_ECO8A RecName: Full=30S ribosomal protein S11
gi|226708367|sp|B1X6E9|RS11_ECODH RecName: Full=30S ribosomal protein S11
gi|226708368|sp|B7NDR9|RS11_ECOLU RecName: Full=30S ribosomal protein S11
gi|226708369|sp|B6I211|RS11_ECOSE RecName: Full=30S ribosomal protein S11
gi|226708370|sp|B1LHB1|RS11_ECOSM RecName: Full=30S ribosomal protein S11
gi|226708372|sp|B7LRR4|RS11_ESCF3 RecName: Full=30S ribosomal protein S11
gi|226708417|sp|B2U2R6|RS11_SHIB3 RecName: Full=30S ribosomal protein S11
gi|254765383|sp|B7UK21|RS11_ECO27 RecName: Full=30S ribosomal protein S11
gi|254765384|sp|B7LHZ9|RS11_ECO55 RecName: Full=30S ribosomal protein S11
gi|254765385|sp|B7N182|RS11_ECO81 RecName: Full=30S ribosomal protein S11
gi|259494622|sp|C4ZUF2|RS11_ECOBW RecName: Full=30S ribosomal protein S11
gi|116666558|pdb|1VS5|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116666610|pdb|1VS7|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|256032354|pdb|3E1A|C Chain C, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032411|pdb|3E1C|C Chain C, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|257097332|pdb|3I1M|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097384|pdb|3I1O|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097436|pdb|3I1Q|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097490|pdb|3I1S|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097544|pdb|3I1Z|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097599|pdb|3I21|K Chain K, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560317|pdb|3KC4|K Chain K, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
gi|308198697|pdb|3OR9|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The First
70s Ribosome.
gi|308198718|pdb|3ORA|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634289|pdb|3IZV|O Chain O, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634314|pdb|3IZW|O Chain O, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|12517926|gb|AAG58418.1|AE005556_11 30S ribosomal subunit protein S11 [Escherichia coli O157:H7 str.
EDL933]
gi|26110310|gb|AAN82496.1|AE016767_256 30S ribosomal protein S11 [Escherichia coli CFT073]
gi|42797|emb|CAA26393.1| unnamed protein product [Escherichia coli]
gi|606232|gb|AAA58095.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. MG1655]
gi|1789692|gb|AAC76322.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. MG1655]
gi|13363635|dbj|BAB37585.1| 30S ribosomal subunit protein S11 [Escherichia coli O157:H7 str.
Sakai]
gi|24053771|gb|AAN44792.1| 30S ribosomal subunit protein S11 [Shigella flexneri 2a str. 301]
gi|30043664|gb|AAP19384.1| 30S ribosomal subunit protein S11 [Shigella flexneri 2a str. 2457T]
gi|73857293|gb|AAZ90000.1| 30S ribosomal subunit protein S11 [Shigella sonnei Ss046]
gi|81242741|gb|ABB63451.1| 30S ribosomal subunit protein S11 [Shigella dysenteriae Sd197]
gi|81247071|gb|ABB67779.1| 30S ribosomal subunit protein S11 [Shigella boydii Sb227]
gi|85676744|dbj|BAE77994.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K12
substr. W3110]
gi|91074298|gb|ABE09179.1| 30S ribosomal subunit protein S11 [Escherichia coli UTI89]
gi|110345128|gb|ABG71365.1| 30S ribosomal protein S11 [Escherichia coli 536]
gi|110616693|gb|ABF05360.1| 30S ribosomal subunit protein S11 [Shigella flexneri 5 str. 8401]
gi|115514703|gb|ABJ02778.1| 30S ribosomal subunit protein S11 [Escherichia coli APEC O1]
gi|157068451|gb|ABV07706.1| ribosomal protein S11 [Escherichia coli HS]
gi|157078156|gb|ABV17864.1| ribosomal protein S11 [Escherichia coli E24377A]
gi|160867377|gb|ABX24000.1| hypothetical protein SARI_04211 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|169753395|gb|ACA76094.1| ribosomal protein S11 [Escherichia coli ATCC 8739]
gi|169890652|gb|ACB04359.1| 30S ribosomal subunit protein S11 [Escherichia coli str. K-12
substr. DH10B]
gi|170121548|gb|EDS90479.1| ribosomal protein S11 [Escherichia albertii TW07627]
gi|170517536|gb|ACB15714.1| ribosomal protein S11 [Escherichia coli SMS-3-5]
gi|187427081|gb|ACD06355.1| ribosomal protein S11 [Shigella boydii CDC 3083-94]
gi|187767004|gb|EDU30848.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4196]
gi|188013839|gb|EDU51961.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4113]
gi|188491267|gb|EDU66370.1| ribosomal protein S11 [Escherichia coli 53638]
gi|188998854|gb|EDU67840.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4076]
gi|189354696|gb|EDU73115.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4401]
gi|189361729|gb|EDU80148.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4486]
gi|189365125|gb|EDU83541.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4501]
gi|189374191|gb|EDU92607.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC869]
gi|189375347|gb|EDU93763.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC508]
gi|190900652|gb|EDV60452.1| ribosomal protein S11 [Escherichia coli B7A]
gi|190905259|gb|EDV64897.1| ribosomal protein S11 [Escherichia coli F11]
gi|192925880|gb|EDV80530.1| ribosomal protein S11 [Escherichia coli E22]
gi|192955124|gb|EDV85618.1| ribosomal protein S11 [Escherichia coli E110019]
gi|194411680|gb|EDX28007.1| ribosomal protein S11 [Escherichia coli B171]
gi|194416681|gb|EDX32812.1| ribosomal protein S11 [Shigella dysenteriae 1012]
gi|194421063|gb|EDX37092.1| ribosomal protein S11 [Escherichia coli 101-1]
gi|208728597|gb|EDZ78198.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4206]
gi|208733165|gb|EDZ81852.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4045]
gi|208738672|gb|EDZ86354.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4042]
gi|209159481|gb|ACI36914.1| ribosomal protein S11 [Escherichia coli O157:H7 str. EC4115]
gi|209757268|gb|ACI76946.1| 30S ribosomal subunit protein S11 [Escherichia coli]
gi|209757270|gb|ACI76947.1| 30S ribosomal subunit protein S11 [Escherichia coli]
gi|209757272|gb|ACI76948.1| 30S ribosomal subunit protein S11 [Escherichia coli]
gi|209757274|gb|ACI76949.1| 30S ribosomal subunit protein S11 [Escherichia coli]
gi|209757276|gb|ACI76950.1| 30S ribosomal subunit protein S11 [Escherichia coli]
gi|209914022|dbj|BAG79096.1| 30S ribosomal protein S11 [Escherichia coli SE11]
gi|215266669|emb|CAS11108.1| 30S ribosomal subunit protein S11 [Escherichia coli O127:H6 str.
E2348/69]
gi|217320754|gb|EEC29178.1| ribosomal protein S11 [Escherichia coli O157:H7 str. TW14588]
gi|218353722|emb|CAV00000.1| 30S ribosomal subunit protein S11 [Escherichia coli 55989]
gi|218358114|emb|CAQ90761.1| 30S ribosomal subunit protein S11 [Escherichia fergusonii ATCC
35469]
gi|218362623|emb|CAR00249.1| 30S ribosomal subunit protein S11 [Escherichia coli IAI1]
gi|218367128|emb|CAR04902.1| 30S ribosomal subunit protein S11 [Escherichia coli S88]
gi|218372046|emb|CAR19906.1| 30S ribosomal subunit protein S11 [Escherichia coli IAI39]
gi|218429148|emb|CAR10100.2| 30S ribosomal subunit protein S11 [Escherichia coli ED1a]
gi|218434002|emb|CAR14919.1| 30S ribosomal subunit protein S11 [Escherichia coli UMN026]
gi|222035006|emb|CAP77749.1| 30S ribosomal protein S11 [Escherichia coli LF82]
gi|226838964|gb|EEH70987.1| ribosomal protein S11 [Escherichia sp. 1_1_43]
gi|226902291|gb|EEH88550.1| 30S ribosomal subunit protein S11 [Escherichia sp. 3_2_53FAA]
gi|227839573|gb|EEJ50039.1| 30S ribosomal protein S11 [Escherichia coli 83972]
gi|238859785|gb|ACR61783.1| 30S ribosomal subunit protein S11 [Escherichia coli BW2952]
gi|242378824|emb|CAQ33616.1| 30S ribosomal subunit protein S11, subunit of 30S ribosomal subunit
and ribosome [Escherichia coli BL21(DE3)]
gi|253322923|gb|ACT27525.1| ribosomal protein S11 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975126|gb|ACT40797.1| 30S ribosomal protein S11 [Escherichia coli B str. REL606]
gi|253979282|gb|ACT44952.1| 30S ribosomal protein S11 [Escherichia coli BL21(DE3)]
gi|254594634|gb|ACT73995.1| 30S ribosomal subunit protein S11 [Escherichia coli O157:H7 str.
TW14359]
gi|257756067|dbj|BAI27569.1| 30S ribosomal subunit protein S11 [Escherichia coli O26:H11 str.
11368]
gi|257761242|dbj|BAI32739.1| 30S ribosomal subunit protein S11 [Escherichia coli O103:H2 str.
12009]
gi|257766396|dbj|BAI37891.1| 30S ribosomal subunit protein S11 [Escherichia coli O111:H- str.
11128]
gi|260447684|gb|ACX38106.1| ribosomal protein S11 [Escherichia coli DH1]
gi|281602662|gb|ADA75646.1| 30S ribosomal protein S11 [Shigella flexneri 2002017]
gi|282951521|emb|CBG91220.1| 30S ribosomal subunit protein S11 [Citrobacter rodentium ICC168]
gi|284923303|emb|CBG36397.1| 30S ribosomal subunit protein S11 [Escherichia coli 042]
gi|290764528|gb|ADD58489.1| 30S ribosomal protein S11 [Escherichia coli O55:H7 str. CB9615]
gi|291088823|gb|EFE21384.1| 30S ribosomal protein S11 [Edwardsiella tarda ATCC 23685]
gi|291321742|gb|EFE61173.1| 30S ribosomal protein S11 [Escherichia coli B088]
gi|291425705|gb|EFE98739.1| 30S ribosomal protein S11 [Escherichia coli FVEC1412]
gi|291431292|gb|EFF04277.1| 30S ribosomal protein S11 [Escherichia coli B185]
gi|291468363|gb|EFF10856.1| 30S ribosomal protein S11 [Escherichia coli B354]
gi|294492523|gb|ADE91279.1| ribosomal protein S11 [Escherichia coli IHE3034]
gi|298276471|gb|EFI17989.1| 30S ribosomal protein S11 [Escherichia coli FVEC1302]
gi|299881639|gb|EFI89850.1| 30S ribosomal protein S11 [Escherichia coli MS 196-1]
gi|300301895|gb|EFJ58280.1| 30S ribosomal protein S11 [Escherichia coli MS 185-1]
gi|300308987|gb|EFJ63507.1| 30S ribosomal protein S11 [Escherichia coli MS 200-1]
gi|300318228|gb|EFJ68012.1| 30S ribosomal protein S11 [Escherichia coli MS 175-1]
gi|300359477|gb|EFJ75347.1| 30S ribosomal protein S11 [Escherichia coli MS 198-1]
gi|300399547|gb|EFJ83085.1| 30S ribosomal protein S11 [Escherichia coli MS 69-1]
gi|300404419|gb|EFJ87957.1| 30S ribosomal protein S11 [Escherichia coli MS 84-1]
gi|300409381|gb|EFJ92919.1| 30S ribosomal protein S11 [Escherichia coli MS 45-1]
gi|300414533|gb|EFJ97843.1| 30S ribosomal protein S11 [Escherichia coli MS 115-1]
gi|300421741|gb|EFK05052.1| 30S ribosomal protein S11 [Escherichia coli MS 182-1]
gi|300453766|gb|EFK17386.1| 30S ribosomal protein S11 [Escherichia coli MS 116-1]
gi|300459452|gb|EFK22945.1| 30S ribosomal protein S11 [Escherichia coli MS 21-1]
gi|300460015|gb|EFK23508.1| 30S ribosomal protein S11 [Escherichia coli MS 187-1]
gi|300524665|gb|EFK45734.1| 30S ribosomal protein S11 [Escherichia coli MS 119-7]
gi|300532384|gb|EFK53446.1| 30S ribosomal protein S11 [Escherichia coli MS 107-1]
gi|300839202|gb|EFK66962.1| 30S ribosomal protein S11 [Escherichia coli MS 124-1]
gi|300848014|gb|EFK75774.1| 30S ribosomal protein S11 [Escherichia coli MS 78-1]
gi|301077785|gb|EFK92591.1| 30S ribosomal protein S11 [Escherichia coli MS 146-1]
gi|305850756|gb|EFM51213.1| 30S ribosomal protein S11 [Escherichia coli NC101]
gi|306905473|gb|EFN36008.1| 30S ribosomal protein S11 [Escherichia coli W]
gi|307555385|gb|ADN48160.1| 30S ribosomal subunit protein S11 [Escherichia coli ABU 83972]
gi|307628332|gb|ADN72636.1| 30S ribosomal protein S11 [Escherichia coli UM146]
gi|308121623|gb|EFO58885.1| 30S ribosomal protein S11 [Escherichia coli MS 145-7]
gi|308746943|gb|ADO46695.1| 30S ribosomal protein S11 [Enterobacter cloacae SCF1]
gi|308926739|gb|EFP72215.1| ribosomal S11 family protein [Shigella dysenteriae 1617]
gi|309703709|emb|CBJ03050.1| 30S ribosomal subunit protein S11 [Escherichia coli ETEC H10407]
gi|310334819|gb|EFQ01024.1| ribosomal S11 family protein [Escherichia coli 1827-70]
gi|312287203|gb|EFR15113.1| ribosomal S11 family protein [Escherichia coli 2362-75]
gi|312947848|gb|ADR28675.1| 30S ribosomal protein S11 [Escherichia coli O83:H1 str. NRG 857C]
gi|313647393|gb|EFS11845.1| ribosomal S11 family protein [Shigella flexneri 2a str. 2457T]
gi|315062589|gb|ADT76916.1| 30S ribosomal subunit protein S11 [Escherichia coli W]
gi|315137872|dbj|BAJ45031.1| 30S ribosomal protein S11 [Escherichia coli DH1]
gi|315255881|gb|EFU35849.1| 30S ribosomal protein S11 [Escherichia coli MS 85-1]
gi|315284627|gb|EFU44072.1| 30S ribosomal protein S11 [Escherichia coli MS 110-3]
gi|315292385|gb|EFU51737.1| 30S ribosomal protein S11 [Escherichia coli MS 153-1]
gi|315298596|gb|EFU57851.1| 30S ribosomal protein S11 [Escherichia coli MS 16-3]
gi|315617099|gb|EFU97709.1| ribosomal S11 family protein [Escherichia coli 3431]
gi|320173941|gb|EFW49117.1| 30S ribosomal protein S11 [Shigella dysenteriae CDC 74-1112]
gi|320182705|gb|EFW57591.1| 30S ribosomal protein S11 [Shigella boydii ATCC 9905]
gi|320187018|gb|EFW61730.1| 30S ribosomal protein S11 [Shigella flexneri CDC 796-83]
gi|320191669|gb|EFW66319.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. EC1212]
gi|320195389|gb|EFW70016.1| 30S ribosomal protein S11 [Escherichia coli WV_060327]
gi|320199484|gb|EFW74074.1| 30S ribosomal protein S11 [Escherichia coli EC4100B]
gi|320639602|gb|EFX09196.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. G5101]
gi|320645100|gb|EFX14116.1| 30S ribosomal protein S11 [Escherichia coli O157:H- str. 493-89]
gi|320650411|gb|EFX18877.1| 30S ribosomal protein S11 [Escherichia coli O157:H- str. H 2687]
gi|320655936|gb|EFX23856.1| 30S ribosomal protein S11 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661388|gb|EFX28803.1| 30S ribosomal protein S11 [Escherichia coli O55:H7 str. USDA 5905]
gi|320666410|gb|EFX33393.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. LSU-61]
gi|323154135|gb|EFZ40338.1| ribosomal S11 family protein [Escherichia coli EPECa14]
gi|323162976|gb|EFZ48811.1| ribosomal protein S11 family protein [Escherichia coli E128010]
gi|323164861|gb|EFZ50652.1| ribosomal S11 family protein [Shigella sonnei 53G]
gi|323173933|gb|EFZ59561.1| ribosomal protein S11 family protein [Escherichia coli LT-68]
gi|323179167|gb|EFZ64741.1| ribosomal protein S11 family protein [Escherichia coli 1180]
gi|323182775|gb|EFZ68176.1| ribosomal protein S11 family protein [Escherichia coli 1357]
gi|323189098|gb|EFZ74382.1| ribosomal protein S11 family protein [Escherichia coli RN587/1]
gi|323376824|gb|ADX49092.1| 30S ribosomal protein S11 [Escherichia coli KO11]
gi|323934504|gb|EGB30912.1| 30S ribosomal protein S11 [Escherichia coli E1520]
gi|323939281|gb|EGB35493.1| 30S ribosomal protein S11 [Escherichia coli E482]
gi|323944282|gb|EGB40358.1| 30S ribosomal protein S11 [Escherichia coli H120]
gi|323950211|gb|EGB46093.1| 30S ribosomal protein S11 [Escherichia coli H252]
gi|323954580|gb|EGB50363.1| 30S ribosomal protein S11 [Escherichia coli H263]
gi|323959552|gb|EGB55205.1| 30S ribosomal protein S11 [Escherichia coli H489]
gi|323966259|gb|EGB61694.1| 30S ribosomal protein S11 [Escherichia coli M863]
gi|323970101|gb|EGB65375.1| 30S ribosomal protein S11 [Escherichia coli TA007]
gi|323974750|gb|EGB69863.1| 30S ribosomal protein S11 [Escherichia coli TW10509]
gi|324009032|gb|EGB78251.1| 30S ribosomal protein S11 [Escherichia coli MS 57-2]
gi|324014914|gb|EGB84133.1| 30S ribosomal protein S11 [Escherichia coli MS 60-1]
gi|324017884|gb|EGB87103.1| 30S ribosomal protein S11 [Escherichia coli MS 117-3]
gi|324111976|gb|EGC05955.1| 30S ribosomal protein S11 [Escherichia fergusonii B253]
gi|324116313|gb|EGC10233.1| 30S ribosomal protein S11 [Escherichia coli E1167]
gi|325498866|gb|EGC96725.1| 30S ribosomal protein S11 [Escherichia fergusonii ECD227]
gi|326342545|gb|EGD66319.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. 1044]
gi|326344532|gb|EGD68281.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 str. 1125]
gi|327250945|gb|EGE62638.1| ribosomal protein S11 family protein [Escherichia coli STEC_7v]
gi|330909341|gb|EGH37855.1| SSU ribosomal protein S11p (S14e) [Escherichia coli AA86]
gi|331036287|gb|EGI08513.1| 30S ribosomal protein S11 [Escherichia coli H736]
gi|331041592|gb|EGI13736.1| 30S ribosomal protein S11 [Escherichia coli M605]
gi|331046905|gb|EGI18983.1| 30S ribosomal protein S11 [Escherichia coli M718]
gi|331052802|gb|EGI24835.1| 30S ribosomal protein S11 [Escherichia coli TA206]
gi|331057420|gb|EGI29406.1| 30S ribosomal protein S11 [Escherichia coli TA143]
gi|331062188|gb|EGI34108.1| 30S ribosomal protein S11 [Escherichia coli TA271]
gi|331067712|gb|EGI39110.1| 30S ribosomal protein S11 [Escherichia coli TA280]
gi|331072538|gb|EGI43863.1| 30S ribosomal protein S11 [Escherichia coli H591]
gi|331077310|gb|EGI48522.1| 30S ribosomal protein S11 [Escherichia coli H299]
gi|332085446|gb|EGI90612.1| ribosomal protein S11 family protein [Shigella boydii 5216-82]
gi|332090513|gb|EGI95611.1| ribosomal protein S11 family protein [Shigella boydii 3594-74]
gi|332104204|gb|EGJ07550.1| 30S ribosomal subunit protein S11 [Shigella sp. D9]
Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|262377289|ref|ZP_06070513.1| 30S ribosomal protein S11 [Acinetobacter lwoffii SH145]
gi|262307742|gb|EEY88881.1| 30S ribosomal protein S11 [Acinetobacter lwoffii SH145]
Length = 128
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + + + G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAK-DTRARKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A ++G+ +L+V V G G GR+SA+RAL A+G+ I SI DVT I HNG
Sbjct: 60 FAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|254463913|ref|ZP_05077324.1| ribosomal protein S11 [Rhodobacterales bacterium Y4I]
gi|206684821|gb|EDZ45303.1| ribosomal protein S11 [Rhodobacterales bacterium Y4I]
Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + SRI+ +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKSRIKRKERKNIATGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|254475723|ref|ZP_05089109.1| ribosomal protein S11 [Ruegeria sp. R11]
gi|214029966|gb|EEB70801.1| ribosomal protein S11 [Ruegeria sp. R11]
Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +RI+ +ERKNI SG AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRIKRKERKNIASGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL AIGF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGSGRESALRALAAIGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|304413168|ref|ZP_07394641.1| 30S ribosomal subunit protein S11 [Candidatus Regiella insecticola
LSR1]
gi|304284011|gb|EFL92404.1| 30S ribosomal subunit protein S11 [Candidatus Regiella insecticola
LSR1]
Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R R +K I G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKPAARTRKRVKKQISDGVAHIHASFNNTIVTITDRQGNALGWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ ++ G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAESVKDCGIKNLEVMVKGPGPGRESTIRALNAAGFRITNIIDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|58038832|ref|YP_190796.1| 30S ribosomal protein S11 [Gluconobacter oxydans 621H]
gi|81352520|sp|Q5FU06|RS11_GLUOX RecName: Full=30S ribosomal protein S11
gi|58001246|gb|AAW60140.1| SSU ribosomal protein S11P [Gluconobacter oxydans 621H]
Length = 130
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 83/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + RIR +ERKNI+SG AHV+STFNNT ITI+D GN IAWSS GF GSRK++
Sbjct: 1 MAKAAAPRIRKKERKNIISGVAHVLSTFNNTMITISDAQGNAIAWSSSGAQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GF I SI D+T + HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFNITSIRDMTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|158520748|ref|YP_001528618.1| ribosomal protein S11 [Desulfococcus oleovorans Hxd3]
gi|226708359|sp|A8ZV80|RS11_DESOH RecName: Full=30S ribosomal protein S11
gi|158509574|gb|ABW66541.1| ribosomal protein S11 [Desulfococcus oleovorans Hxd3]
Length = 128
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + + RKNI SG H+ STFNNT +T+TD GN I+WSS GF GSRK++P
Sbjct: 1 MAKRV-QTKKKVRKNIASGVVHIQSTFNNTIVTVTDVAGNVISWSSAGGRGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++D KA G+ ++EV V G G GR+SALRAL+A G T+ I DVT I HNG
Sbjct: 60 FAAQMASEDAVKKAMAQGLQTVEVYVKGPGPGRESALRALQAAGLTVTMIRDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|239787586|emb|CAX84054.1| 30S ribosomal protein S11 [uncultured bacterium]
Length = 133
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 75/127 (59%), Positives = 94/127 (74%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ +RI+ +ERKNI SG AH+ STFNNT ++ITD GN I+W S GF GSRK++PFA
Sbjct: 7 KTATRIKKKERKNIASGIAHIRSTFNNTIVSITDTVGNVISWGSAGAQGFKGSRKSTPFA 66
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A +D KA HGM +LEV++ G G+GR+SALRAL IGF I + DVT I HNGCR
Sbjct: 67 AQMAAEDAGRKAMEHGMRNLEVRLKGPGSGRESALRALANIGFNIAFVQDVTPIPHNGCR 126
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 127 PPKRRRV 133
>gi|157377428|ref|YP_001476028.1| 30S ribosomal protein S11 [Shewanella sediminis HAW-EB3]
gi|189040438|sp|A8G1C7|RS11_SHESH RecName: Full=30S ribosomal protein S11
gi|157319802|gb|ABV38900.1| ribosomal protein S11 [Shewanella sediminis HAW-EB3]
Length = 130
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL ++G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGVKNLEVFVKGPGPGRESAIRALNSVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|114704507|ref|ZP_01437415.1| 30S ribosomal protein S11 [Fulvimarina pelagi HTCC2506]
gi|114539292|gb|EAU42412.1| 30S ribosomal protein S11 [Fulvimarina pelagi HTCC2506]
Length = 128
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R+R RERKNI +G AHV STFNNT ITITD GN I+WSS GF GSRK++P
Sbjct: 1 MAKE-QRVRRRERKNISAGVAHVNSTFNNTLITITDAQGNAISWSSAGAQGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM +LEV+V G G+GR+SALRAL+A GFTI SI DVT I HNG
Sbjct: 60 FAAQIAAEDCAKKAQEHGMRTLEVEVCGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
RPRK+RR+
Sbjct: 120 VRPRKKRRV 128
>gi|222056681|ref|YP_002539043.1| ribosomal protein S11 [Geobacter sp. FRC-32]
gi|221565970|gb|ACM21942.1| ribosomal protein S11 [Geobacter sp. FRC-32]
Length = 131
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 74/115 (64%), Positives = 90/115 (78%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN +AWS+ GF GSRK++PFAAQ+A +DC+ KA
Sbjct: 17 NIPNGVAHIQATFNNTMITITDPVGNVVAWSTSGCKGFKGSRKSTPFAAQIAAEDCAKKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM S+EV V G G+GR+SALRAL+A GF+I I DVT I HNGCRP KRRR+
Sbjct: 77 QEHGMRSVEVYVKGPGSGRESALRALQAAGFSISFIRDVTPIPHNGCRPPKRRRV 131
>gi|22127883|ref|NP_671306.1| 30S ribosomal protein S11 [Yersinia pestis KIM 10]
gi|45440090|ref|NP_991629.1| 30S ribosomal protein S11 [Yersinia pestis biovar Microtus str.
91001]
gi|51597965|ref|YP_072156.1| 30S ribosomal protein S11 [Yersinia pseudotuberculosis IP 32953]
gi|108809232|ref|YP_653148.1| 30S ribosomal protein S11 [Yersinia pestis Antiqua]
gi|108813997|ref|YP_649764.1| 30S ribosomal protein S11 [Yersinia pestis Nepal516]
gi|145597473|ref|YP_001161548.1| 30S ribosomal protein S11 [Yersinia pestis Pestoides F]
gi|150260720|ref|ZP_01917448.1| 30S ribosomal protein S11 [Yersinia pestis CA88-4125]
gi|153949132|ref|YP_001402840.1| 30S ribosomal protein S11 [Yersinia pseudotuberculosis IP 31758]
gi|162418448|ref|YP_001605195.1| 30S ribosomal protein S11 [Yersinia pestis Angola]
gi|165927836|ref|ZP_02223668.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166010563|ref|ZP_02231461.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213364|ref|ZP_02239399.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399239|ref|ZP_02304763.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419332|ref|ZP_02311085.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425723|ref|ZP_02317476.1| ribosomal protein S11 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170022567|ref|YP_001719072.1| 30S ribosomal protein S11 [Yersinia pseudotuberculosis YPIII]
gi|186897161|ref|YP_001874273.1| 30S ribosomal protein S11 [Yersinia pseudotuberculosis PB1/+]
gi|218927438|ref|YP_002345313.1| 30S ribosomal protein S11 [Yersinia pestis CO92]
gi|229836286|ref|ZP_04456453.1| 30S ribosomal subunit protein S11 [Yersinia pestis Pestoides A]
gi|229840090|ref|ZP_04460249.1| 30S ribosomal subunit protein S11 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842172|ref|ZP_04462327.1| 30S ribosomal subunit protein S11 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904528|ref|ZP_04519639.1| 30S ribosomal subunit protein S11 [Yersinia pestis Nepal516]
gi|270488254|ref|ZP_06205328.1| 30S ribosomal protein S11 [Yersinia pestis KIM D27]
gi|294502307|ref|YP_003566369.1| 30S ribosomal protein S11 [Yersinia pestis Z176003]
gi|37138829|sp|Q8ZJ89|RS11_YERPE RecName: Full=30S ribosomal protein S11
gi|59798662|sp|Q664U4|RS11_YERPS RecName: Full=30S ribosomal protein S11
gi|122979879|sp|Q1CCW6|RS11_YERPN RecName: Full=30S ribosomal protein S11
gi|123372100|sp|Q1C2W9|RS11_YERPA RecName: Full=30S ribosomal protein S11
gi|152060833|sp|A4TH13|RS11_YERPP RecName: Full=30S ribosomal protein S11
gi|166991583|sp|A7FNL2|RS11_YERP3 RecName: Full=30S ribosomal protein S11
gi|226708439|sp|B2K514|RS11_YERPB RecName: Full=30S ribosomal protein S11
gi|226708440|sp|A9R916|RS11_YERPG RecName: Full=30S ribosomal protein S11
gi|226708441|sp|B1JJG8|RS11_YERPY RecName: Full=30S ribosomal protein S11
gi|21961019|gb|AAM87557.1|AE014003_15 30S ribosomal subunit protein S11 [Yersinia pestis KIM 10]
gi|45434945|gb|AAS60506.1| 30S ribosomal protein S11 [Yersinia pestis biovar Microtus str.
91001]
gi|51591247|emb|CAH22913.1| 30S ribosomal protein S11 [Yersinia pseudotuberculosis IP 32953]
gi|108777645|gb|ABG20164.1| SSU ribosomal protein S11P [Yersinia pestis Nepal516]
gi|108781145|gb|ABG15203.1| SSU ribosomal protein S11P [Yersinia pestis Antiqua]
gi|115346049|emb|CAL18915.1| 30S ribosomal protein S11 [Yersinia pestis CO92]
gi|145209169|gb|ABP38576.1| SSU ribosomal protein S11P [Yersinia pestis Pestoides F]
gi|149290128|gb|EDM40205.1| 30S ribosomal protein S11 [Yersinia pestis CA88-4125]
gi|152960627|gb|ABS48088.1| ribosomal protein S11 [Yersinia pseudotuberculosis IP 31758]
gi|162351263|gb|ABX85211.1| ribosomal protein S11 [Yersinia pestis Angola]
gi|165920112|gb|EDR37413.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990653|gb|EDR42954.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205662|gb|EDR50142.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963326|gb|EDR59347.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051743|gb|EDR63151.1| ribosomal protein S11 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055413|gb|EDR65207.1| ribosomal protein S11 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749101|gb|ACA66619.1| ribosomal protein S11 [Yersinia pseudotuberculosis YPIII]
gi|186700187|gb|ACC90816.1| ribosomal protein S11 [Yersinia pseudotuberculosis PB1/+]
gi|229678646|gb|EEO74751.1| 30S ribosomal subunit protein S11 [Yersinia pestis Nepal516]
gi|229690482|gb|EEO82536.1| 30S ribosomal subunit protein S11 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696456|gb|EEO86503.1| 30S ribosomal subunit protein S11 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706354|gb|EEO92361.1| 30S ribosomal subunit protein S11 [Yersinia pestis Pestoides A]
gi|262360387|gb|ACY57108.1| 30S ribosomal protein S11 [Yersinia pestis D106004]
gi|270336758|gb|EFA47535.1| 30S ribosomal protein S11 [Yersinia pestis KIM D27]
gi|294352766|gb|ADE63107.1| 30S ribosomal protein S11 [Yersinia pestis Z176003]
gi|320013365|gb|ADV96936.1| 30S ribosomal subunit protein S11 [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 129
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKTVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|260432471|ref|ZP_05786442.1| 30S ribosomal protein S11 [Silicibacter lacuscaerulensis ITI-1157]
gi|260416299|gb|EEX09558.1| 30S ribosomal protein S11 [Silicibacter lacuscaerulensis ITI-1157]
Length = 129
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI SG AHV STFNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKTRVKRKERKNIASGVAHVNSTFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|258542050|ref|YP_003187483.1| 30S ribosomal protein S11 [Acetobacter pasteurianus IFO 3283-01]
gi|329114195|ref|ZP_08242957.1| 30S ribosomal protein S11 [Acetobacter pomorum DM001]
gi|256633128|dbj|BAH99103.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-01]
gi|256636185|dbj|BAI02154.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-03]
gi|256639240|dbj|BAI05202.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-07]
gi|256642294|dbj|BAI08249.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-22]
gi|256645349|dbj|BAI11297.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-26]
gi|256648404|dbj|BAI14345.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-32]
gi|256651457|dbj|BAI17391.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654448|dbj|BAI20375.1| SSU ribosomal protein S11P [Acetobacter pasteurianus IFO 3283-12]
gi|326696271|gb|EGE47950.1| 30S ribosomal protein S11 [Acetobacter pomorum DM001]
Length = 130
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + RIR +ERKNI+SG AHV+STFNNT ITI+D GN I+WSS GF GSRK++
Sbjct: 1 MAKAATPRIRKKERKNIISGVAHVLSTFNNTMITISDAQGNAISWSSAGAQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GFTI SI D+T + HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFTITSIRDMTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|224827040|ref|ZP_03700137.1| ribosomal protein S11 [Lutiella nitroferrum 2002]
gi|224600706|gb|EEG06892.1| ribosomal protein S11 [Lutiella nitroferrum 2002]
Length = 131
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK++ G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTAVRVRKKVRKSVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+SA+RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAEHAGKVAQEYGVKNLEVRIKGPGPGRESAVRALNALGFKITSISDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|34499617|ref|NP_903832.1| 30S ribosomal protein S11 [Chromobacterium violaceum ATCC 12472]
gi|59798830|sp|Q7NQH5|RS11_CHRVO RecName: Full=30S ribosomal protein S11
gi|34105468|gb|AAQ61823.1| 30S ribosomal protein S11 [Chromobacterium violaceum ATCC 12472]
Length = 131
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK++ G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTAVRVRKKVRKSVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+SA+RAL ++GF I SI DVT + H
Sbjct: 61 TPFAAQVAAEHAGKVAQEYGVKNLEVRIKGPGPGRESAVRALNSLGFKITSISDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|167564392|ref|ZP_02357308.1| ribosomal protein S11 [Burkholderia oklahomensis EO147]
gi|167571539|ref|ZP_02364413.1| ribosomal protein S11 [Burkholderia oklahomensis C6786]
Length = 133
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GSR
Sbjct: 1 MAKASNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I +I DVT I
Sbjct: 61 KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|114561359|ref|YP_748872.1| 30S ribosomal protein S11 [Shewanella frigidimarina NCIMB 400]
gi|122301095|sp|Q089N1|RS11_SHEFN RecName: Full=30S ribosomal protein S11
gi|114332652|gb|ABI70034.1| SSU ribosomal protein S11P [Shewanella frigidimarina NCIMB 400]
Length = 130
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL A+G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGIAAQDYGVKNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|13470574|ref|NP_102143.1| 30S ribosomal protein S11 [Mesorhizobium loti MAFF303099]
gi|260468531|ref|ZP_05813698.1| ribosomal protein S11 [Mesorhizobium opportunistum WSM2075]
gi|319783343|ref|YP_004142819.1| 30S ribosomal protein S11 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|48474617|sp|Q98N34|RS11_RHILO RecName: Full=30S ribosomal protein S11
gi|14021316|dbj|BAB47929.1| 30S ribosomal protein S11 [Mesorhizobium loti MAFF303099]
gi|259028687|gb|EEW29996.1| ribosomal protein S11 [Mesorhizobium opportunistum WSM2075]
gi|317169231|gb|ADV12769.1| 30S ribosomal protein S11 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 129
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN+IAWSS GF GSRK++P
Sbjct: 1 MAKEAARVRRRERKNISSGVAHVNSTFNNTMITITDAQGNSIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D + KAQ HGM LEV+V G G+GR+SALRAL+A GFTI SI DVT I HNG
Sbjct: 61 FAAQMAAEDVAKKAQEHGMRMLEVEVCGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|218135255|ref|ZP_03464059.1| hypothetical protein BACPEC_03160 [Bacteroides pectinophilus ATCC
43243]
gi|217990640|gb|EEC56651.1| hypothetical protein BACPEC_03160 [Bacteroides pectinophilus ATCC
43243]
Length = 123
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 60/122 (49%), Positives = 89/122 (72%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
+ R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A
Sbjct: 2 TKKRVKKNVEHGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFRGSKKSTPYAAQMAA 61
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ + A HG+ S++V V G G+GR++A+RAL A G T+ SI DVT + HNGCRP KRR
Sbjct: 62 ETATKAALIHGLKSVDVMVKGPGSGREAAIRALSAAGLTVTSIKDVTPVPHNGCRPPKRR 121
Query: 128 RI 129
R+
Sbjct: 122 RV 123
>gi|294669847|ref|ZP_06734906.1| hypothetical protein NEIELOOT_01740 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308240|gb|EFE49483.1| hypothetical protein NEIELOOT_01740 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 145
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 65/127 (51%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK I G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTALRVRKKVRKTISEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+S++RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAETAGKVAQEYGIKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH 120
Query: 119 NGCRPRK 125
NGCRP K
Sbjct: 121 NGCRPPK 127
>gi|312795801|ref|YP_004028723.1| SSU ribosomal protein S11P [Burkholderia rhizoxinica HKI 454]
gi|312167576|emb|CBW74579.1| SSU ribosomal protein S11P [Burkholderia rhizoxinica HKI 454]
Length = 134
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 67/134 (50%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 1 MPKS-----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GS
Sbjct: 1 MAKASNSSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I SI DVT
Sbjct: 61 RKSTPFAAQVAAESAGRVAVEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRRI
Sbjct: 121 VPHNGCRPPKRRRI 134
>gi|39997925|ref|NP_953876.1| 30S ribosomal protein S11 [Geobacter sulfurreducens PCA]
gi|59798800|sp|Q749B1|RS11_GEOSL RecName: Full=30S ribosomal protein S11
gi|39984870|gb|AAR36226.1| ribosomal protein S11 [Geobacter sulfurreducens PCA]
gi|298506863|gb|ADI85586.1| ribosomal protein S11 [Geobacter sulfurreducens KN400]
Length = 131
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 73/115 (63%), Positives = 89/115 (77%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN +AWSS GF GSRK++PFAAQ+A ++C+ KA
Sbjct: 17 NIPNGVAHIQATFNNTIITITDPVGNVVAWSSAGSKGFKGSRKSTPFAAQIAAEECARKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM S+EV V G G+GR+SALRAL+A GF + I DVT I HNGCRP KRRR+
Sbjct: 77 QEHGMRSVEVFVKGPGSGRESALRALQAAGFHVNFIRDVTPIPHNGCRPPKRRRV 131
>gi|148263163|ref|YP_001229869.1| 30S ribosomal protein S11 [Geobacter uraniireducens Rf4]
gi|146396663|gb|ABQ25296.1| SSU ribosomal protein S11P [Geobacter uraniireducens Rf4]
Length = 131
Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 74/115 (64%), Positives = 89/115 (77%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN IAW + GF GSRK++PFAAQ+A +DC+ KA
Sbjct: 17 NIPNGVAHIQATFNNTMITITDPVGNVIAWCTSGCKGFKGSRKSTPFAAQMAAEDCAKKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM S+EV V G G+GR+SALRAL+A GF+I I DVT I HNGCRP KRRR+
Sbjct: 77 QEHGMRSVEVFVKGPGSGRESALRALQAAGFSISFIRDVTPIPHNGCRPPKRRRV 131
>gi|110634007|ref|YP_674215.1| 30S ribosomal protein S11 [Mesorhizobium sp. BNC1]
gi|123353646|sp|Q11HS5|RS11_MESSB RecName: Full=30S ribosomal protein S11
gi|110284991|gb|ABG63050.1| SSU ribosomal protein S11P [Chelativorans sp. BNC1]
Length = 129
Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 90/129 (69%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEAARVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +DC+ KAQ HGM +LEV+VSG G+GR+SALRAL+A GFTI SI DVT I HNG
Sbjct: 61 FAAQVAAEDCARKAQEHGMRTLEVEVSGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|238025956|ref|YP_002910187.1| 30S ribosomal protein S11 [Burkholderia glumae BGR1]
gi|237875150|gb|ACR27483.1| 30S ribosomal protein S11 [Burkholderia glumae BGR1]
Length = 133
Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GSR
Sbjct: 1 MAKASNNAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I +I DVT I
Sbjct: 61 KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|300309480|ref|YP_003773572.1| 30S ribosomal protein S11 [Herbaspirillum seropedicae SmR1]
gi|300072265|gb|ADJ61664.1| 30S ribosomal subunit S11 protein [Herbaspirillum seropedicae SmR1]
Length = 134
Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP SR+R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GS
Sbjct: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA + A G+ +LEV++ G G GR+SA+RAL +G I I DVT
Sbjct: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRRI
Sbjct: 121 VPHNGCRPPKRRRI 134
>gi|162149151|ref|YP_001603612.1| 30S ribosomal protein S11 [Gluconacetobacter diazotrophicus PAl 5]
gi|189040417|sp|A9H3J3|RS11_GLUDA RecName: Full=30S ribosomal protein S11
gi|161787728|emb|CAP57324.1| putative 30S ribosomal protein S11 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 130
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + RIR +ERKNI+SG AHV+STFNNT ITI+D GN IAWSS GF GSRK++
Sbjct: 1 MAKAAAPRIRKKERKNIISGVAHVLSTFNNTMITISDAQGNAIAWSSAGAQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GF+I SI D+T + HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFSITSIRDMTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|123444075|ref|YP_001008045.1| 30S ribosomal protein S11 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238788889|ref|ZP_04632679.1| hypothetical protein yfred0001_26960 [Yersinia frederiksenii ATCC
33641]
gi|332163238|ref|YP_004299815.1| 30S ribosomal protein S11 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|152060832|sp|A1JS03|RS11_YERE8 RecName: Full=30S ribosomal protein S11
gi|122091036|emb|CAL13919.1| 30S ribosomal protein S11 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238722916|gb|EEQ14566.1| hypothetical protein yfred0001_26960 [Yersinia frederiksenii ATCC
33641]
gi|318607722|emb|CBY29220.1| SSU ribosomal protein S11p (S14e) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667468|gb|ADZ44112.1| 30S ribosomal protein S11 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861831|emb|CBX72002.1| 30S ribosomal protein S11 [Yersinia enterocolitica W22703]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKTVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|209545105|ref|YP_002277334.1| 30S ribosomal protein S11 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532782|gb|ACI52719.1| ribosomal protein S11 [Gluconacetobacter diazotrophicus PAl 5]
Length = 130
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + RIR +ERKNI+SG AHV+STFNNT ITI+D GN IAWSS GF GSRK++
Sbjct: 1 MAKAAAPRIRKKERKNIISGVAHVLSTFNNTMITISDVQGNAIAWSSAGAQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GF+I SI D+T + HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFSITSIRDMTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|53720797|ref|YP_109783.1| 30S ribosomal protein S11 [Burkholderia pseudomallei K96243]
gi|53723830|ref|YP_104142.1| 30S ribosomal protein S11 [Burkholderia mallei ATCC 23344]
gi|76809500|ref|YP_335116.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1710b]
gi|78064948|ref|YP_367717.1| 30S ribosomal protein S11 [Burkholderia sp. 383]
gi|83719823|ref|YP_443548.1| 30S ribosomal protein S11 [Burkholderia thailandensis E264]
gi|107024279|ref|YP_622606.1| 30S ribosomal protein S11 [Burkholderia cenocepacia AU 1054]
gi|115350346|ref|YP_772185.1| 30S ribosomal protein S11 [Burkholderia ambifaria AMMD]
gi|116688396|ref|YP_834019.1| 30S ribosomal protein S11 [Burkholderia cenocepacia HI2424]
gi|121600264|ref|YP_994432.1| 30S ribosomal protein S11 [Burkholderia mallei SAVP1]
gi|124383942|ref|YP_001027919.1| 30S ribosomal protein S11 [Burkholderia mallei NCTC 10229]
gi|126438369|ref|YP_001060726.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 668]
gi|126449962|ref|YP_001083014.1| 30S ribosomal protein S11 [Burkholderia mallei NCTC 10247]
gi|126455195|ref|YP_001068010.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1106a]
gi|134283319|ref|ZP_01770020.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 305]
gi|134294467|ref|YP_001118202.1| 30S ribosomal protein S11 [Burkholderia vietnamiensis G4]
gi|161523453|ref|YP_001578465.1| 30S ribosomal protein S11 [Burkholderia multivorans ATCC 17616]
gi|167001675|ref|ZP_02267467.1| 30S ribosomal protein S11 [Burkholderia mallei PRL-20]
gi|167582599|ref|ZP_02375473.1| ribosomal protein S11 [Burkholderia thailandensis TXDOH]
gi|167620713|ref|ZP_02389344.1| ribosomal protein S11 [Burkholderia thailandensis Bt4]
gi|167721553|ref|ZP_02404789.1| ribosomal protein S11 [Burkholderia pseudomallei DM98]
gi|167740527|ref|ZP_02413301.1| ribosomal protein S11 [Burkholderia pseudomallei 14]
gi|167817732|ref|ZP_02449412.1| ribosomal protein S11 [Burkholderia pseudomallei 91]
gi|167826129|ref|ZP_02457600.1| ribosomal protein S11 [Burkholderia pseudomallei 9]
gi|167838188|ref|ZP_02465047.1| ribosomal protein S11 [Burkholderia thailandensis MSMB43]
gi|167847641|ref|ZP_02473149.1| ribosomal protein S11 [Burkholderia pseudomallei B7210]
gi|167896213|ref|ZP_02483615.1| ribosomal protein S11 [Burkholderia pseudomallei 7894]
gi|167904595|ref|ZP_02491800.1| ribosomal protein S11 [Burkholderia pseudomallei NCTC 13177]
gi|167912860|ref|ZP_02499951.1| ribosomal protein S11 [Burkholderia pseudomallei 112]
gi|167920819|ref|ZP_02507910.1| ribosomal protein S11 [Burkholderia pseudomallei BCC215]
gi|170700718|ref|ZP_02891713.1| ribosomal protein S11 [Burkholderia ambifaria IOP40-10]
gi|170731706|ref|YP_001763653.1| 30S ribosomal protein S11 [Burkholderia cenocepacia MC0-3]
gi|171318372|ref|ZP_02907530.1| ribosomal protein S11 [Burkholderia ambifaria MEX-5]
gi|172059365|ref|YP_001807017.1| 30S ribosomal protein S11 [Burkholderia ambifaria MC40-6]
gi|189351774|ref|YP_001947402.1| 30S ribosomal protein S11 [Burkholderia multivorans ATCC 17616]
gi|206558665|ref|YP_002229425.1| 30S ribosomal protein S11 [Burkholderia cenocepacia J2315]
gi|217424730|ref|ZP_03456227.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 576]
gi|221201589|ref|ZP_03574627.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD2M]
gi|221207336|ref|ZP_03580346.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD2]
gi|221213474|ref|ZP_03586449.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD1]
gi|226198281|ref|ZP_03793852.1| 30S ribosomal protein S11 [Burkholderia pseudomallei Pakistan 9]
gi|237814121|ref|YP_002898572.1| 30S ribosomal protein S11 [Burkholderia pseudomallei MSHR346]
gi|238562960|ref|ZP_00439642.2| 30S ribosomal protein S11 [Burkholderia mallei GB8 horse 4]
gi|242317635|ref|ZP_04816651.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1106b]
gi|254175001|ref|ZP_04881662.1| 30S ribosomal protein S11 [Burkholderia mallei ATCC 10399]
gi|254180363|ref|ZP_04886961.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1655]
gi|254190326|ref|ZP_04896834.1| 30S ribosomal protein S11 [Burkholderia pseudomallei Pasteur 52237]
gi|254198467|ref|ZP_04904888.1| 30S ribosomal protein S11 [Burkholderia pseudomallei S13]
gi|254201215|ref|ZP_04907579.1| 30S ribosomal protein S11 [Burkholderia mallei FMH]
gi|254206556|ref|ZP_04912907.1| 30S ribosomal protein S11 [Burkholderia mallei JHU]
gi|254246579|ref|ZP_04939900.1| Ribosomal protein S11 [Burkholderia cenocepacia PC184]
gi|254253496|ref|ZP_04946814.1| Ribosomal protein S11 [Burkholderia dolosa AUO158]
gi|254260898|ref|ZP_04951952.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1710a]
gi|254300600|ref|ZP_04968045.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 406e]
gi|254357094|ref|ZP_04973368.1| 30S ribosomal protein S11 [Burkholderia mallei 2002721280]
gi|257137666|ref|ZP_05585928.1| 30S ribosomal protein S11 [Burkholderia thailandensis E264]
gi|59798631|sp|Q62GM9|RS11_BURMA RecName: Full=30S ribosomal protein S11
gi|59798642|sp|Q63Q35|RS11_BURPS RecName: Full=30S ribosomal protein S11
gi|91207733|sp|Q3JMT7|RS11_BURP1 RecName: Full=30S ribosomal protein S11
gi|91207734|sp|Q39KE3|RS11_BURS3 RecName: Full=30S ribosomal protein S11
gi|122324242|sp|Q0BJ22|RS11_BURCM RecName: Full=30S ribosomal protein S11
gi|123244314|sp|Q1BRX2|RS11_BURCA RecName: Full=30S ribosomal protein S11
gi|123726557|sp|Q2SU51|RS11_BURTA RecName: Full=30S ribosomal protein S11
gi|152060579|sp|A0K3P9|RS11_BURCH RecName: Full=30S ribosomal protein S11
gi|152060580|sp|A3P089|RS11_BURP0 RecName: Full=30S ribosomal protein S11
gi|166231803|sp|A3MRX8|RS11_BURM7 RecName: Full=30S ribosomal protein S11
gi|166231804|sp|A2S7K0|RS11_BURM9 RecName: Full=30S ribosomal protein S11
gi|166231805|sp|A1V879|RS11_BURMS RecName: Full=30S ribosomal protein S11
gi|166231806|sp|A3NEF5|RS11_BURP6 RecName: Full=30S ribosomal protein S11
gi|166231807|sp|A4JAR4|RS11_BURVG RecName: Full=30S ribosomal protein S11
gi|226708337|sp|B1YRQ3|RS11_BURA4 RecName: Full=30S ribosomal protein S11
gi|226708338|sp|B1JU46|RS11_BURCC RecName: Full=30S ribosomal protein S11
gi|226708339|sp|B4E5E4|RS11_BURCJ RecName: Full=30S ribosomal protein S11
gi|226708340|sp|A9ADL7|RS11_BURM1 RecName: Full=30S ribosomal protein S11
gi|52211211|emb|CAH37200.1| 30S ribosomal protein S11 [Burkholderia pseudomallei K96243]
gi|52427253|gb|AAU47846.1| ribosomal protein S11 [Burkholderia mallei ATCC 23344]
gi|76578953|gb|ABA48428.1| ribosomal protein S11 [Burkholderia pseudomallei 1710b]
gi|77965693|gb|ABB07073.1| SSU ribosomal protein S11P [Burkholderia sp. 383]
gi|83653648|gb|ABC37711.1| ribosomal protein S11 [Burkholderia thailandensis E264]
gi|105894468|gb|ABF77633.1| SSU ribosomal protein S11P [Burkholderia cenocepacia AU 1054]
gi|115280334|gb|ABI85851.1| SSU ribosomal protein S11P [Burkholderia ambifaria AMMD]
gi|116646485|gb|ABK07126.1| SSU ribosomal protein S11P [Burkholderia cenocepacia HI2424]
gi|121229074|gb|ABM51592.1| 30S ribosomal protein S11 [Burkholderia mallei SAVP1]
gi|124291962|gb|ABN01231.1| 30S ribosomal protein S11 [Burkholderia mallei NCTC 10229]
gi|124871355|gb|EAY63071.1| Ribosomal protein S11 [Burkholderia cenocepacia PC184]
gi|124896105|gb|EAY69985.1| Ribosomal protein S11 [Burkholderia dolosa AUO158]
gi|126217862|gb|ABN81368.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 668]
gi|126228837|gb|ABN92377.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1106a]
gi|126242832|gb|ABO05925.1| 30S ribosomal protein S11 [Burkholderia mallei NCTC 10247]
gi|134137624|gb|ABO53367.1| SSU ribosomal protein S11P [Burkholderia vietnamiensis G4]
gi|134245514|gb|EBA45607.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 305]
gi|147747109|gb|EDK54185.1| 30S ribosomal protein S11 [Burkholderia mallei FMH]
gi|147752098|gb|EDK59164.1| 30S ribosomal protein S11 [Burkholderia mallei JHU]
gi|148026158|gb|EDK84243.1| 30S ribosomal protein S11 [Burkholderia mallei 2002721280]
gi|157810512|gb|EDO87682.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 406e]
gi|157938002|gb|EDO93672.1| 30S ribosomal protein S11 [Burkholderia pseudomallei Pasteur 52237]
gi|160340882|gb|ABX13968.1| ribosomal protein S11 [Burkholderia multivorans ATCC 17616]
gi|160696046|gb|EDP86016.1| 30S ribosomal protein S11 [Burkholderia mallei ATCC 10399]
gi|169655207|gb|EDS87900.1| 30S ribosomal protein S11 [Burkholderia pseudomallei S13]
gi|169814948|gb|ACA89531.1| ribosomal protein S11 [Burkholderia cenocepacia MC0-3]
gi|170134388|gb|EDT02721.1| ribosomal protein S11 [Burkholderia ambifaria IOP40-10]
gi|171096450|gb|EDT41349.1| ribosomal protein S11 [Burkholderia ambifaria MEX-5]
gi|171991882|gb|ACB62801.1| ribosomal protein S11 [Burkholderia ambifaria MC40-6]
gi|184210902|gb|EDU07945.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1655]
gi|189335796|dbj|BAG44866.1| small subunit ribosomal protein S11 [Burkholderia multivorans ATCC
17616]
gi|198034702|emb|CAR50569.1| 30S ribosomal protein S11 [Burkholderia cenocepacia J2315]
gi|217392186|gb|EEC32211.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 576]
gi|221166926|gb|EED99397.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD1]
gi|221172924|gb|EEE05361.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD2]
gi|221178405|gb|EEE10814.1| 30S ribosomal protein S11 [Burkholderia multivorans CGD2M]
gi|225929801|gb|EEH25817.1| 30S ribosomal protein S11 [Burkholderia pseudomallei Pakistan 9]
gi|237506148|gb|ACQ98466.1| 30S ribosomal protein S11 [Burkholderia pseudomallei MSHR346]
gi|238521644|gb|EEP85094.1| 30S ribosomal protein S11 [Burkholderia mallei GB8 horse 4]
gi|242140874|gb|EES27276.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1106b]
gi|243062572|gb|EES44758.1| 30S ribosomal protein S11 [Burkholderia mallei PRL-20]
gi|254219587|gb|EET08971.1| 30S ribosomal protein S11 [Burkholderia pseudomallei 1710a]
gi|325529702|gb|EGD06565.1| 30S ribosomal protein S11 [Burkholderia sp. TJI49]
Length = 133
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GSR
Sbjct: 1 MAKASNTAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I +I DVT I
Sbjct: 61 KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|94312224|ref|YP_585434.1| 30S ribosomal protein S11 [Cupriavidus metallidurans CH34]
gi|123383592|sp|Q1LI61|RS11_RALME RecName: Full=30S ribosomal protein S11
gi|93356076|gb|ABF10165.1| 30S ribosomal subunit protein S11 [Cupriavidus metallidurans CH34]
Length = 133
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MPKSP----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K P R R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKGPNNAAQRARKKVKKNVADGIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA ++ AQ+ G+ +LEV++ G G GR+SA+RAL A+G I I DVT +
Sbjct: 61 KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKGPGPGRESAVRALNALGIKIAVIEDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|84685392|ref|ZP_01013290.1| 30S ribosomal protein S11 [Maritimibacter alkaliphilus HTCC2654]
gi|84666549|gb|EAQ13021.1| 30S ribosomal protein S11 [Rhodobacterales bacterium HTCC2654]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRTKRKERKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 FAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|90424914|ref|YP_533284.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris BisB18]
gi|123275057|sp|Q211H1|RS11_RHOPB RecName: Full=30S ribosomal protein S11
gi|90106928|gb|ABD88965.1| SSU ribosomal protein S11P [Rhodopseudomonas palustris BisB18]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|149915868|ref|ZP_01904392.1| 30S ribosomal protein S13 [Roseobacter sp. AzwK-3b]
gi|149810191|gb|EDM70037.1| 30S ribosomal protein S13 [Roseobacter sp. AzwK-3b]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDTRRTKKKVSKNIATGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HGM +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGMKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|16272742|ref|NP_438960.1| 30S ribosomal protein S11 [Haemophilus influenzae Rd KW20]
gi|1173178|sp|P44379|RS11_HAEIN RecName: Full=30S ribosomal protein S11
gi|1573811|gb|AAC22459.1| ribosomal protein S11 (rpS11) [Haemophilus influenzae Rd KW20]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R +K +V G H+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKTPVRARKRVKKQVVDGVRHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEIVKEFGLKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|88861471|ref|ZP_01136097.1| 30S ribosomal subunit protein S11 [Pseudoalteromonas tunicata D2]
gi|88816519|gb|EAR26348.1| 30S ribosomal subunit protein S11 [Pseudoalteromonas tunicata D2]
Length = 128
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R + +K + G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKAPIR-RKKVKKQVADGMAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV + G G GR+SA+RAL A+G+ I +I DVT I HNG
Sbjct: 60 FAAQVAAERAGTAAQEYGLKNLEVFIKGPGPGRESAVRALNAVGYRITNITDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|73542840|ref|YP_297360.1| 30S ribosomal protein S11 [Ralstonia eutropha JMP134]
gi|113869407|ref|YP_727896.1| 30S ribosomal protein S11 [Ralstonia eutropha H16]
gi|194290999|ref|YP_002006906.1| 30S ribosomal protein s11 [Cupriavidus taiwanensis LMG 19424]
gi|91207674|sp|Q46WG7|RS11_RALEJ RecName: Full=30S ribosomal protein S11
gi|123328831|sp|Q0K643|RS11_RALEH RecName: Full=30S ribosomal protein S11
gi|226708354|sp|B3R7E5|RS11_CUPTR RecName: Full=30S ribosomal protein S11
gi|72120253|gb|AAZ62516.1| SSU ribosomal protein S11P [Ralstonia eutropha JMP134]
gi|113528183|emb|CAJ94528.1| SSU ribosomal protein S11 [Ralstonia eutropha H16]
gi|193224834|emb|CAQ70845.1| 30S ribosomal subunit protein S11 [Cupriavidus taiwanensis LMG
19424]
Length = 132
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/132 (53%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 1 MPKSP---SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K P +R R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK
Sbjct: 1 MAKGPNNAARARKKVKKNVADGIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA ++ AQ+ G+ +LEV++ G G GR+SA+RAL A+G I I DVT I
Sbjct: 61 STPFAAQVAAENAGRVAQDQGIKNLEVRIKGPGPGRESAVRALNALGIKIAIIEDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 HNGCRPPKRRRI 132
>gi|254449330|ref|ZP_05062775.1| ribosomal protein S11 [gamma proteobacterium HTCC5015]
gi|198261089|gb|EDY85389.1| ribosomal protein S11 [gamma proteobacterium HTCC5015]
Length = 128
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R R + R+ + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAK-PTRTRKKNRRTVTEGVAHIYASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +L+V+V G G GR+SA+RAL +GF I I DVT + HNG
Sbjct: 60 FAAQVAAERAGDAAKEYGLKNLDVEVKGPGPGRESAVRALNNVGFKISHIKDVTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPSKRRRV 128
>gi|16762866|ref|NP_458483.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144353|ref|NP_807695.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052885|ref|ZP_03345763.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419636|ref|ZP_03352702.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425774|ref|ZP_03358524.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213580696|ref|ZP_03362522.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213612394|ref|ZP_03370220.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647331|ref|ZP_03377384.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213856916|ref|ZP_03384156.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|25009160|sp|Q8Z1X5|RS11_SALTI RecName: Full=30S ribosomal protein S11
gi|25294671|pir||AH1008 30S ribosomal chain protein S11 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16505173|emb|CAD09169.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139991|gb|AAO71555.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPVCARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|27380488|ref|NP_772017.1| 30S ribosomal protein S11 [Bradyrhizobium japonicum USDA 110]
gi|30179750|sp|P59370|RS11_BRAJA RecName: Full=30S ribosomal protein S11
gi|27353652|dbj|BAC50642.1| 30S ribosomal protein S11 [Bradyrhizobium japonicum USDA 110]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MGKEATRVRRRERKNIASGVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|158334433|ref|YP_001515605.1| 30S ribosomal protein S11 [Acaryochloris marina MBIC11017]
gi|189040399|sp|B0C431|RS11_ACAM1 RecName: Full=30S ribosomal protein S11
gi|158304674|gb|ABW26291.1| 30S ribosomal protein S11 [Acaryochloris marina MBIC11017]
Length = 130
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M R +++K++ +G AH+ STFNNT +TI+D G+ ++W+S GF G++K +
Sbjct: 1 MAPQSKRSGGRKQKKHVPNGVAHIQSTFNNTIVTISDASGDVVSWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A++ + +A + GM +EV VSG GAGR++A+RAL+ G I I DVT I HN
Sbjct: 61 PFAAQTASESAARRAMDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|159042864|ref|YP_001531658.1| 30S ribosomal protein S11 [Dinoroseobacter shibae DFL 12]
gi|189040413|sp|A8LM80|RS11_DINSH RecName: Full=30S ribosomal protein S11
gi|157910624|gb|ABV92057.1| 30S ribosomal protein S11 [Dinoroseobacter shibae DFL 12]
Length = 129
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 98/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + +ERKNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKQRTKKKERKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I +I DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVKTLEVQVQGPGSGRESALRALAAVGFNITAIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|83748173|ref|ZP_00945200.1| SSU ribosomal protein S11P [Ralstonia solanacearum UW551]
gi|187930340|ref|YP_001900827.1| 30S ribosomal protein S11 [Ralstonia pickettii 12J]
gi|207721873|ref|YP_002252311.1| 30S ribosomal protein S11 [Ralstonia solanacearum MolK2]
gi|207744552|ref|YP_002260944.1| 30s ribosomal protein s11 [Ralstonia solanacearum IPO1609]
gi|241664508|ref|YP_002982868.1| 30S ribosomal protein S11 [Ralstonia pickettii 12D]
gi|300690184|ref|YP_003751179.1| 30S ribosomal subunit protein S11 [Ralstonia solanacearum PSI07]
gi|300702804|ref|YP_003744405.1| 30S ribosomal protein S11 [Ralstonia solanacearum CFBP2957]
gi|309782858|ref|ZP_07677578.1| 30S ribosomal protein S11 [Ralstonia sp. 5_7_47FAA]
gi|226708405|sp|B2UEJ5|RS11_RALPJ RecName: Full=30S ribosomal protein S11
gi|83725141|gb|EAP72292.1| SSU ribosomal protein S11P [Ralstonia solanacearum UW551]
gi|187727230|gb|ACD28395.1| ribosomal protein S11 [Ralstonia pickettii 12J]
gi|206587041|emb|CAQ17625.1| 30s ribosomal protein s11 [Ralstonia solanacearum MolK2]
gi|206595958|emb|CAQ62885.1| 30s ribosomal protein s11 [Ralstonia solanacearum IPO1609]
gi|240866535|gb|ACS64196.1| ribosomal protein S11 [Ralstonia pickettii 12D]
gi|299065439|emb|CBJ36608.1| 30S ribosomal subunit protein S11 [Ralstonia solanacearum CMR15]
gi|299070466|emb|CBJ41761.1| 30S ribosomal subunit protein S11 [Ralstonia solanacearum CFBP2957]
gi|299077244|emb|CBJ49870.1| 30S ribosomal subunit protein S11 [Ralstonia solanacearum PSI07]
gi|308918282|gb|EFP63959.1| 30S ribosomal protein S11 [Ralstonia sp. 5_7_47FAA]
Length = 133
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKSP----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R R + RKN+ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKAANTAAQRARKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + AQ+ G+ +LEV++ G G GR+SA+RAL +G I I DVT +
Sbjct: 61 KSTPFAAQVAAESAGRVAQDQGIKNLEVRIKGPGPGRESAVRALNNLGIKIQLIEDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|325981828|ref|YP_004294230.1| 30S ribosomal protein S11 [Nitrosomonas sp. AL212]
gi|325531347|gb|ADZ26068.1| 30S ribosomal protein S11 [Nitrosomonas sp. AL212]
Length = 129
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K SR+R + +KN+ G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MVKITSRVRKKIKKNVSEGIAHIHASFNNTIVTITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A ++ S A + G+ +LEV+V G G GRDSA+RAL + GF I SI DVT + HNG
Sbjct: 61 FAAQIAAENASKIAIDCGVKNLEVRVKGPGPGRDSAVRALNSAGFKITSISDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|85858171|ref|YP_460373.1| 30S ribosomal protein S11 [Syntrophus aciditrophicus SB]
gi|123752427|sp|Q2LQD1|RS11_SYNAS RecName: Full=30S ribosomal protein S11
gi|85721262|gb|ABC76205.1| SSU ribosomal protein S11P [Syntrophus aciditrophicus SB]
Length = 130
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + ++ K NI G AH+ STFNNT ITITDP GN IAWSS + GF GSRK++
Sbjct: 1 MAKQVRKTGKKKEKKNIPEGIAHIQSTFNNTIITITDPIGNVIAWSSSGMQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A +DC KA+ HG+ ++V V G G+GR+SALR+L+A G TI I DVT I HN
Sbjct: 61 PFAAQMAAEDCVKKAKEHGLRKVQVYVKGPGSGRESALRSLQAAGLTISLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|91785441|ref|YP_560647.1| 30S ribosomal protein S11 [Burkholderia xenovorans LB400]
gi|170695705|ref|ZP_02886847.1| ribosomal protein S11 [Burkholderia graminis C4D1M]
gi|186477563|ref|YP_001859033.1| 30S ribosomal protein S11 [Burkholderia phymatum STM815]
gi|187925592|ref|YP_001897234.1| 30S ribosomal protein S11 [Burkholderia phytofirmans PsJN]
gi|209521362|ref|ZP_03270075.1| ribosomal protein S11 [Burkholderia sp. H160]
gi|295677908|ref|YP_003606432.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1002]
gi|296163297|ref|ZP_06846058.1| 30S ribosomal protein S11 [Burkholderia sp. Ch1-1]
gi|307731231|ref|YP_003908455.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1003]
gi|323527578|ref|YP_004229731.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1001]
gi|123167990|sp|Q13TJ4|RS11_BURXL RecName: Full=30S ribosomal protein S11
gi|91689395|gb|ABE32595.1| SSU ribosomal protein S11P [Burkholderia xenovorans LB400]
gi|170139310|gb|EDT07496.1| ribosomal protein S11 [Burkholderia graminis C4D1M]
gi|184194022|gb|ACC71987.1| ribosomal protein S11 [Burkholderia phymatum STM815]
gi|187716786|gb|ACD18010.1| ribosomal protein S11 [Burkholderia phytofirmans PsJN]
gi|209498182|gb|EDZ98324.1| ribosomal protein S11 [Burkholderia sp. H160]
gi|295437751|gb|ADG16921.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1002]
gi|295886436|gb|EFG66293.1| 30S ribosomal protein S11 [Burkholderia sp. Ch1-1]
gi|307585766|gb|ADN59164.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1003]
gi|323384580|gb|ADX56671.1| 30S ribosomal protein S11 [Burkholderia sp. CCGE1001]
Length = 134
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 1 MPKS-----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GS
Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I +I DVT
Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRRI
Sbjct: 121 VPHNGCRPPKRRRI 134
>gi|37523142|ref|NP_926519.1| 30S ribosomal protein S11 [Gloeobacter violaceus PCC 7421]
gi|59798827|sp|Q7NFF3|RS11_GLOVI RecName: Full=30S ribosomal protein S11
gi|35214145|dbj|BAC91514.1| 30S ribosomal protein S11 [Gloeobacter violaceus PCC 7421]
Length = 130
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R+N+ SG AH+ STFNNT +TI D G+ I+W+S GF G++K +
Sbjct: 1 MAKPTRGGQKKKVRRNVPSGVAHIQSTFNNTIVTIADTVGDVISWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + +A + GM EV VSG GAGR++A+RAL+A+G I I DVT I HN
Sbjct: 61 PFAAQQAAESAGRRAIDSGMRQCEVMVSGPGAGRETAIRALQAVGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|291460743|ref|ZP_06600133.1| 30S ribosomal protein S11 [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416702|gb|EFE90421.1| 30S ribosomal protein S11 [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 131
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M KS ++ ++R N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKSTTKRVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + A HG+ ++V V G G+GR++A+RAL+A G + SI DVT + H
Sbjct: 61 TPYAAQMAAETAVKAALVHGLKYVDVMVKGPGSGREAAIRALQANGLEVTSIKDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|167587748|ref|ZP_02380136.1| ribosomal protein S11 [Burkholderia ubonensis Bu]
Length = 133
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R+R + +KN+ G HV ++FNNT ITITD GN +AW++ GF GSR
Sbjct: 1 MAKASNTAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+SA+RAL +G I +I DVT +
Sbjct: 61 KSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|77361712|ref|YP_341287.1| 30S ribosomal protein S11 [Pseudoalteromonas haloplanktis TAC125]
gi|119472062|ref|ZP_01614320.1| 30S ribosomal subunit protein S11 [Alteromonadales bacterium TW-7]
gi|315127933|ref|YP_004069936.1| 30S ribosomal protein S11 [Pseudoalteromonas sp. SM9913]
gi|91207671|sp|Q3IJK7|RS11_PSEHT RecName: Full=30S ribosomal protein S11
gi|76876623|emb|CAI87845.1| 30S ribosomal subunit protein S11 [Pseudoalteromonas haloplanktis
TAC125]
gi|119445197|gb|EAW26489.1| 30S ribosomal subunit protein S11 [Alteromonadales bacterium TW-7]
gi|315016447|gb|ADT69785.1| 30S ribosomal protein S11 [Pseudoalteromonas sp. SM9913]
gi|332037270|gb|EGI73725.1| 30S ribosomal protein S11 [Pseudoalteromonas haloplanktis ANT/505]
Length = 128
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R + +K + G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTPIR-RKKVKKQVADGMAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +LEV + G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 60 FAAQVAAERAGTAAQEYGLKNLEVFIKGPGPGRESAVRALNAAGYRITNITDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|86357328|ref|YP_469220.1| 30S ribosomal protein S11 [Rhizobium etli CFN 42]
gi|116251563|ref|YP_767401.1| 30S ribosomal protein S11 [Rhizobium leguminosarum bv. viciae 3841]
gi|190891378|ref|YP_001977920.1| 30S ribosomal protein S11 [Rhizobium etli CIAT 652]
gi|209548958|ref|YP_002280875.1| 30S ribosomal protein S11 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|218508352|ref|ZP_03506230.1| 30S ribosomal protein S11 [Rhizobium etli Brasil 5]
gi|218516293|ref|ZP_03513133.1| 30S ribosomal protein S11 [Rhizobium etli 8C-3]
gi|218674112|ref|ZP_03523781.1| 30S ribosomal protein S11 [Rhizobium etli GR56]
gi|218679852|ref|ZP_03527749.1| 30S ribosomal protein S11 [Rhizobium etli CIAT 894]
gi|222085698|ref|YP_002544228.1| 30S ribosomal protein S11 [Agrobacterium radiobacter K84]
gi|241204188|ref|YP_002975284.1| 30S ribosomal protein S11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|123081960|sp|Q1MIB8|RS11_RHIL3 RecName: Full=30S ribosomal protein S11
gi|123738353|sp|Q2K9J3|RS11_RHIEC RecName: Full=30S ribosomal protein S11
gi|226708406|sp|B3PWU4|RS11_RHIE6 RecName: Full=30S ribosomal protein S11
gi|226708407|sp|B5ZZ56|RS11_RHILW RecName: Full=30S ribosomal protein S11
gi|254765359|sp|B9JDV1|RS11_AGRRK RecName: Full=30S ribosomal protein S11
gi|86281430|gb|ABC90493.1| 30S ribosomal protein S11 [Rhizobium etli CFN 42]
gi|115256211|emb|CAK07292.1| putative 30S ribosomal protein S11 [Rhizobium leguminosarum bv.
viciae 3841]
gi|190696657|gb|ACE90742.1| 30S ribosomal protein S11 [Rhizobium etli CIAT 652]
gi|209534714|gb|ACI54649.1| ribosomal protein S11 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|221723146|gb|ACM26302.1| 30S ribosomal protein S11 [Agrobacterium radiobacter K84]
gi|240858078|gb|ACS55745.1| ribosomal protein S11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|327189693|gb|EGE56840.1| 30S ribosomal protein S11 [Rhizobium etli CNPAF512]
Length = 129
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R+R RERKNI SG AHV STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEAVRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|260577156|ref|ZP_05845133.1| ribosomal protein S11 [Rhodobacter sp. SW2]
gi|259020630|gb|EEW23949.1| ribosomal protein S11 [Rhodobacter sp. SW2]
Length = 129
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +RI+ +ERKNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKTRIKRKERKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSSGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|149926590|ref|ZP_01914850.1| 30S ribosomal protein S11 [Limnobacter sp. MED105]
gi|149824519|gb|EDM83735.1| 30S ribosomal protein S11 [Limnobacter sp. MED105]
Length = 131
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MPK--SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + +R R + +KNI G AHV ++FNNT ITITD GN +AWS+ GF GSRK+
Sbjct: 1 MAKGTANNRARKKVKKNISDGIAHVHASFNNTIITITDRQGNALAWSTSGAQGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ G+ ++EV + G G GR+S++RAL A+G + SI D+T I H
Sbjct: 61 TPFAAQVAAEVAGKAAQECGIKTVEVLIKGPGPGRESSVRALNALGIKVTSISDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRRI
Sbjct: 121 NGCRPPKRRRI 131
>gi|323141380|ref|ZP_08076271.1| 30S ribosomal protein S11 [Phascolarctobacterium sp. YIT 12067]
gi|322414129|gb|EFY04957.1| 30S ribosomal protein S11 [Phascolarctobacterium sp. YIT 12067]
Length = 130
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+++G AH+ STFNNT +TI D GN ++W+S +GF GSRK++PFAAQ+A ++ + A
Sbjct: 16 NVINGVAHIRSTFNNTIVTIADTEGNVLSWASAGGLGFRGSRKSTPFAAQMAAEEATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +EV V G GAGR++A+RAL+A G + SI DVT I HNGCRP KRRR+
Sbjct: 76 MEHGLKQVEVYVKGPGAGREAAIRALQAAGLEVNSIKDVTPIPHNGCRPPKRRRV 130
>gi|85706696|ref|ZP_01037788.1| 30S ribosomal protein S11 [Roseovarius sp. 217]
gi|85668754|gb|EAQ23623.1| 30S ribosomal protein S11 [Roseovarius sp. 217]
Length = 129
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDTKRTKKKVSKNIATGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HGM SL+V+V G G+GR+SALRAL A+GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGMRSLDVEVQGPGSGRESALRALAAVGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|238898904|ref|YP_002924586.1| 30S ribosomal subunit protein S11 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259494626|sp|C4K795|RS11_HAMD5 RecName: Full=30S ribosomal protein S11
gi|229466664|gb|ACQ68438.1| 30S ribosomal subunit protein S11 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 129
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R ++ I + AHV ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKAPIRAHKRIKRQIPNCIAHVHASFNNTIVTITDGQGNVLAWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ +++G+ +LEV V G G GR+S +RA A G+ I SI D+T I HNG
Sbjct: 61 FAAQVAAERCAEAVKDYGIKTLEVIVKGPGPGRESTVRAFNASGYRITSITDMTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|189424435|ref|YP_001951612.1| 30S ribosomal protein S11 [Geobacter lovleyi SZ]
gi|189420694|gb|ACD95092.1| ribosomal protein S11 [Geobacter lovleyi SZ]
Length = 130
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 71/115 (61%), Positives = 88/115 (76%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN +AWS+ GF GSRK++PFAAQVA +DC+ KA
Sbjct: 16 NITNGVAHIQATFNNTIITITDPVGNVVAWSTAGAKGFKGSRKSTPFAAQVAAEDCARKA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HG+ ++EV V G G+GR+SALRAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 76 QEHGLRNIEVYVKGPGSGRESALRALQATGLNVSFIRDVTPIPHNGCRPPKRRRV 130
>gi|99080119|ref|YP_612273.1| 30S ribosomal protein S11 [Ruegeria sp. TM1040]
gi|123379120|sp|Q1GK05|RS11_SILST RecName: Full=30S ribosomal protein S11
gi|99036399|gb|ABF63011.1| SSU ribosomal protein S11P [Ruegeria sp. TM1040]
Length = 129
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ERKNI SG AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRTKRKERKNIASGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL AIGF I +I DVT IAHNG
Sbjct: 61 YAAQMAAEDAGRKAQDHGVKTLEVEVQGPGSGRESALRALAAIGFNITNIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|239623373|ref|ZP_04666404.1| ribosomal protein S11 [Clostridiales bacterium 1_7_47_FAA]
gi|239522339|gb|EEQ62205.1| ribosomal protein S11 [Clostridiales bacterium 1_7_47FAA]
Length = 133
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 19 NVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETATKAA 78
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 79 LVHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPVPHNGCRPPKRRRV 133
>gi|296116710|ref|ZP_06835320.1| 30S ribosomal protein S11 [Gluconacetobacter hansenii ATCC 23769]
gi|295976922|gb|EFG83690.1| 30S ribosomal protein S11 [Gluconacetobacter hansenii ATCC 23769]
Length = 130
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/130 (63%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + RIR +ERKNI+SG AHV+STFNNT ITI+D GN IAWSS GF GSRK++
Sbjct: 1 MAKAAAPRIRKKERKNIISGVAHVLSTFNNTMITISDAQGNAIAWSSAGAQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GF+I +I D+T + HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFSITAIRDMTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|83949764|ref|ZP_00958497.1| 30S ribosomal protein S11 [Roseovarius nubinhibens ISM]
gi|83837663|gb|EAP76959.1| 30S ribosomal protein S11 [Roseovarius nubinhibens ISM]
Length = 129
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDTRRGKRKVSKNIATGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HGM +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGMKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|119383535|ref|YP_914591.1| 30S ribosomal protein S11 [Paracoccus denitrificans PD1222]
gi|152060802|sp|A1B051|RS11_PARDP RecName: Full=30S ribosomal protein S11
gi|119373302|gb|ABL68895.1| SSU ribosomal protein S11P [Paracoccus denitrificans PD1222]
Length = 129
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +RI+ +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRIKRKERKNIATGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I +I DVT IAHNG
Sbjct: 61 YAAQMAAEDAGKKAQEHGVRTLEVEVQGPGSGRESALRALAAVGFNITAIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|266620236|ref|ZP_06113171.1| 30S ribosomal protein S11 [Clostridium hathewayi DSM 13479]
gi|302388061|ref|YP_003823883.1| 30S ribosomal protein S11 [Clostridium saccharolyticum WM1]
gi|288868140|gb|EFD00439.1| 30S ribosomal protein S11 [Clostridium hathewayi DSM 13479]
gi|302198689|gb|ADL06260.1| 30S ribosomal protein S11 [Clostridium saccharolyticum WM1]
Length = 133
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 19 NVERGQAHIQSSFNNTIVTLTDTQGNALSWASAGGLGFRGSRKSTPYAAQMAAETATKAA 78
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 79 LVHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPVPHNGCRPPKRRRV 133
>gi|149202867|ref|ZP_01879838.1| 30S ribosomal protein S11 [Roseovarius sp. TM1035]
gi|149143413|gb|EDM31449.1| 30S ribosomal protein S11 [Roseovarius sp. TM1035]
Length = 129
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 76/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDTKRTKKKVSKNIATGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HGM SL+V+V G G+GR+SALRAL A+GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGMRSLDVEVQGPGSGRESALRALAAVGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|15889219|ref|NP_354900.1| 30S ribosomal protein S11 [Agrobacterium tumefaciens str. C58]
gi|325293313|ref|YP_004279177.1| 30S ribosomal protein S11 [Agrobacterium sp. H13-3]
gi|48474523|sp|Q8UE40|RS11_AGRT5 RecName: Full=30S ribosomal protein S11
gi|15157044|gb|AAK87685.1| 30S ribosomal protein S11 [Agrobacterium tumefaciens str. C58]
gi|325061166|gb|ADY64857.1| 30S ribosomal protein S11 [Agrobacterium sp. H13-3]
Length = 129
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN IAWSS GF GSRK++P
Sbjct: 1 MAKEAARVRRRERKNITSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +DC+ KAQ HGM SLEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|227871776|ref|ZP_03990181.1| ribosomal protein S11 [Oribacterium sinus F0268]
gi|227842377|gb|EEJ52602.1| ribosomal protein S11 [Oribacterium sinus F0268]
Length = 131
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 62/131 (47%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSP--SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M KS + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKSTGKRVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + A HG+ ++V V G G+GR++A+RAL A G + SI DVT + H
Sbjct: 61 TPYAAQMAAETAVKAALVHGLKYVDVMVKGPGSGREAAIRALAANGLEVTSIKDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|124268603|ref|YP_001022607.1| 30S ribosomal protein S11 [Methylibium petroleiphilum PM1]
gi|152060792|sp|A2SLD3|RS11_METPP RecName: Full=30S ribosomal protein S11
gi|124261378|gb|ABM96372.1| SSU ribosomal protein S11P [Methylibium petroleiphilum PM1]
Length = 133
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/133 (54%), Positives = 95/133 (71%), Gaps = 4/133 (3%)
Query: 1 MPKSP----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+P R+R + RKN+ G AHV ++FNNT ITITD GN +AW+S GF GSR
Sbjct: 1 MAKAPNTAAQRVRKKVRKNVSDGVAHVHASFNNTIITITDRQGNALAWASSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + AQ+ G+ +LEV++ G G GR+S++RAL A+G IVSI DVT +
Sbjct: 61 KSTPFAAQVAAEVAGRAAQDQGIKNLEVEIKGPGPGRESSVRALAALGIRIVSISDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP+KRRRI
Sbjct: 121 PHNGCRPQKRRRI 133
>gi|84499817|ref|ZP_00998105.1| 30S ribosomal protein S11 [Oceanicola batsensis HTCC2597]
gi|84392961|gb|EAQ05172.1| 30S ribosomal protein S11 [Oceanicola batsensis HTCC2597]
Length = 129
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R++ + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDTRRVKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|291548009|emb|CBL21117.1| SSU ribosomal protein S11P [Ruminococcus sp. SR1/5]
Length = 130
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 16 NVEHGQAHIQSSFNNTIVTLTDNEGNALSWASAGGLGFKGSRKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LIHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPHNGCRPPKRRRV 130
>gi|329893622|ref|ZP_08269756.1| SSU ribosomal protein S11p (S14e) [gamma proteobacterium IMCC3088]
gi|328923549|gb|EGG30861.1| SSU ribosomal protein S11p (S14e) [gamma proteobacterium IMCC3088]
Length = 130
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ R + K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPSAKAPRRKITKTVVDGVAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A+ +G+ +L+V+V G G GR+SA+RAL G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGEAAKEYGLKNLDVQVKGPGPGRESAVRALNGCGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|254470057|ref|ZP_05083461.1| ribosomal protein S11 [Pseudovibrio sp. JE062]
gi|211960368|gb|EEA95564.1| ribosomal protein S11 [Pseudovibrio sp. JE062]
Length = 122
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/121 (67%), Positives = 94/121 (77%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R RERKNI SG AHV STFNNT ITITD GN I+WSS +GF GSRK++P+AAQVA +
Sbjct: 2 RRRERKNISSGVAHVNSTFNNTMITITDAQGNAISWSSAGALGFKGSRKSTPYAAQVAAE 61
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
D KA HGM +LEV+V G G+GR+SALRAL+A GF I SI DVT I HNGCRPRKRRR
Sbjct: 62 DAGRKAAEHGMRTLEVEVRGPGSGRESALRALQAAGFVITSIRDVTPIPHNGCRPRKRRR 121
Query: 129 I 129
+
Sbjct: 122 V 122
>gi|126736629|ref|ZP_01752369.1| ribosomal protein S11 [Roseobacter sp. CCS2]
gi|255261210|ref|ZP_05340552.1| 30S ribosomal protein S11 [Thalassiobium sp. R2A62]
gi|126713942|gb|EBA10813.1| ribosomal protein S11 [Roseobacter sp. CCS2]
gi|255103545|gb|EET46219.1| 30S ribosomal protein S11 [Thalassiobium sp. R2A62]
Length = 129
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDTKRTKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|313884547|ref|ZP_07818308.1| 30S ribosomal protein S11 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620331|gb|EFR31759.1| 30S ribosomal protein S11 [Eremococcus coleocola ACS-139-V-Col8]
Length = 130
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R R R +KN+ G AH+ STFNNT + ITD +GN I+WSS +GF GSRK++
Sbjct: 1 MAKRQNARRRRRVKKNVEKGIAHIRSTFNNTIVMITDENGNAISWSSAGSLGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A++ + A HGM S+EV V G G+GR+SA+R+L+A G + +I DVT I HN
Sbjct: 61 PYAAQMASEVAAKGAMEHGMKSVEVAVKGPGSGRESAIRSLQATGLDVTAIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|88704353|ref|ZP_01102067.1| 30S ribosomal protein S11 [Congregibacter litoralis KT71]
gi|254516933|ref|ZP_05128991.1| ribosomal protein S11 [gamma proteobacterium NOR5-3]
gi|88701404|gb|EAQ98509.1| 30S ribosomal protein S11 [Congregibacter litoralis KT71]
gi|219674438|gb|EED30806.1| ribosomal protein S11 [gamma proteobacterium NOR5-3]
Length = 130
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ R + + I G AH+ ++FNNT ITITD GNT++W++ GF GSRK++
Sbjct: 1 MAKPGAKSTRKKITRTIADGIAHIHASFNNTIITITDRQGNTLSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A+ +G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGEAAKEYGLQNLDVQVKGPGPGRESAVRALNACGYKISNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|119502946|ref|ZP_01625031.1| 30S ribosomal protein S11 [marine gamma proteobacterium HTCC2080]
gi|119461292|gb|EAW42382.1| 30S ribosomal protein S11 [marine gamma proteobacterium HTCC2080]
Length = 132
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 62/128 (48%), Positives = 89/128 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+ + + K +V G AHV ++FNNT +TITD GNT++W++ GF GSRK++PF
Sbjct: 5 AKNSKTTKRKITKQVVDGVAHVHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKSTPF 64
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQVA + A+ +G+ +L+V+V G G GR+SA+RAL + G+ I +I DVT I HNGC
Sbjct: 65 AAQVAAERAGEAAKEYGLKNLDVQVKGPGPGRESAVRALNSCGYKITNITDVTPIPHNGC 124
Query: 122 RPRKRRRI 129
RP K+RR+
Sbjct: 125 RPPKKRRV 132
>gi|148260916|ref|YP_001235043.1| 30S ribosomal protein S11 [Acidiphilium cryptum JF-5]
gi|326404314|ref|YP_004284396.1| 30S ribosomal protein S11 [Acidiphilium multivorum AIU301]
gi|172047770|sp|A5FZU2|RS11_ACICJ RecName: Full=30S ribosomal protein S11
gi|146402597|gb|ABQ31124.1| SSU ribosomal protein S11P [Acidiphilium cryptum JF-5]
gi|325051176|dbj|BAJ81514.1| 30S ribosomal protein S11 [Acidiphilium multivorum AIU301]
Length = 130
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 79/130 (60%), Positives = 102/130 (78%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +R R +ERKNI SG AHV+++FNNT +TI+D GN I+WSS GF GSRK++
Sbjct: 1 MAKAASTRPRRKERKNISSGVAHVLASFNNTMVTISDAQGNAISWSSAGSQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D KA+ HGM +LE++VSG GAGR+SALRAL+ IGF+I +I D+T I HN
Sbjct: 61 PYAAQVAAEDAGRKAREHGMETLEIEVSGPGAGRESALRALQTIGFSITAIRDLTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|225376436|ref|ZP_03753657.1| hypothetical protein ROSEINA2194_02078 [Roseburia inulinivorans DSM
16841]
gi|225211812|gb|EEG94166.1| hypothetical protein ROSEINA2194_02078 [Roseburia inulinivorans DSM
16841]
Length = 130
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 16 NVERGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LIHGLKSVDVFVKGPGSGREAAIRALSACGLEVTSIKDVTPVPHNGCRPPKRRRV 130
>gi|259416774|ref|ZP_05740694.1| 30S ribosomal protein S11 [Silicibacter sp. TrichCH4B]
gi|259348213|gb|EEW59990.1| 30S ribosomal protein S11 [Silicibacter sp. TrichCH4B]
Length = 129
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRTKRKERKNIATGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL AIGF I +I DVT IAHNG
Sbjct: 61 YAAQMAAEDAGRKAQDHGVKTLEVEVQGPGSGRESALRALAAIGFNITNIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|17547714|ref|NP_521116.1| 30S ribosomal protein S11 [Ralstonia solanacearum GMI1000]
gi|48474566|sp|Q8XV36|RS11_RALSO RecName: Full=30S ribosomal protein S11
gi|17430019|emb|CAD16704.1| probable 30s ribosomal protein s11 [Ralstonia solanacearum GMI1000]
Length = 133
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKSP----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R R + RKN+ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKAANTAAQRARKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + AQ+ G+ +LEV++ G G GR+SA+RAL +G I I DVT +
Sbjct: 61 KSTPFAAQVAAESAGRVAQDQGIKNLEVRIKGPGPGRESAVRALNNLGIKIQVIEDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|218284160|ref|ZP_03489954.1| hypothetical protein EUBIFOR_02559 [Eubacterium biforme DSM 3989]
gi|218215353|gb|EEC88891.1| hypothetical protein EUBIFOR_02559 [Eubacterium biforme DSM 3989]
Length = 129
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 85/128 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI G AH+ STFNNT +TITD +GN +AWSS +GF GSRK++P
Sbjct: 1 MAKVQKTRKRRVKKNIARGCAHIHSTFNNTIVTITDENGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + A +HGM ++ V V G G GR++A+RAL+ G I I DVT I HNG
Sbjct: 61 YAAQLAGEAAGKAAMDHGMKTVSVDVKGPGPGREAAVRALQVAGLEITMINDVTPIPHNG 120
Query: 121 CRPRKRRR 128
CRP KR R
Sbjct: 121 CRPPKRPR 128
>gi|83854949|ref|ZP_00948479.1| 30S ribosomal protein S11 [Sulfitobacter sp. NAS-14.1]
gi|83941472|ref|ZP_00953934.1| 30S ribosomal protein S11 [Sulfitobacter sp. EE-36]
gi|83842792|gb|EAP81959.1| 30S ribosomal protein S11 [Sulfitobacter sp. NAS-14.1]
gi|83847292|gb|EAP85167.1| 30S ribosomal protein S11 [Sulfitobacter sp. EE-36]
Length = 129
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 73/129 (56%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MAREKTKTKRKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|94676729|ref|YP_588799.1| 30S ribosomal protein S11 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123384131|sp|Q1LTB5|RS11_BAUCH RecName: Full=30S ribosomal protein S11
gi|94219879|gb|ABF14038.1| ribosomal protein S11 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 129
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ R +K +V G AH+ ++FNNT +TITD GNT+ W++ GF GSRK++P
Sbjct: 1 MAKTILAARKHIKKQVVDGIAHIHASFNNTIVTITDRQGNTLGWATAGNSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ +++G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCAEAVKDYGIKNLEVMVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|257870542|ref|ZP_05650195.1| ribosomal protein S11 [Enterococcus gallinarum EG2]
gi|257804706|gb|EEV33528.1| ribosomal protein S11 [Enterococcus gallinarum EG2]
Length = 129
Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI +G AH+ STFNNT I ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MAAKKVSRKRRVKKNIEAGIAHIHSTFNNTIIMITDTHGNALAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ ++EV V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETATKAAMEHGLRTVEVTVKGPGSGREAAIRSLQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|238916290|ref|YP_002929807.1| small subunit ribosomal protein S11 [Eubacterium eligens ATCC
27750]
gi|238871650|gb|ACR71360.1| small subunit ribosomal protein S11 [Eubacterium eligens ATCC
27750]
Length = 131
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LIHGLKSVDVMVKGPGSGREAAIRALSAAGLEVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|254460747|ref|ZP_05074163.1| ribosomal protein S11 [Rhodobacterales bacterium HTCC2083]
gi|206677336|gb|EDZ41823.1| ribosomal protein S11 [Rhodobacteraceae bacterium HTCC2083]
Length = 129
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 73/129 (56%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MAREAKRTKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KA HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAAEHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|225574731|ref|ZP_03783341.1| hypothetical protein RUMHYD_02808 [Blautia hydrogenotrophica DSM
10507]
gi|225038060|gb|EEG48306.1| hypothetical protein RUMHYD_02808 [Blautia hydrogenotrophica DSM
10507]
Length = 130
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 16 NVERGQAHIQSSFNNTIVTLTDTEGNALSWASAGGLGFKGSRKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LIHGLKTVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPHNGCRPPKRRRV 130
>gi|257866553|ref|ZP_05646206.1| ribosomal protein S11 [Enterococcus casseliflavus EC30]
gi|257872931|ref|ZP_05652584.1| ribosomal protein S11 [Enterococcus casseliflavus EC10]
gi|257876157|ref|ZP_05655810.1| ribosomal protein S11 [Enterococcus casseliflavus EC20]
gi|325567352|ref|ZP_08144019.1| 30S ribosomal protein S11 [Enterococcus casseliflavus ATCC 12755]
gi|257800511|gb|EEV29539.1| ribosomal protein S11 [Enterococcus casseliflavus EC30]
gi|257807095|gb|EEV35917.1| ribosomal protein S11 [Enterococcus casseliflavus EC10]
gi|257810323|gb|EEV39143.1| ribosomal protein S11 [Enterococcus casseliflavus EC20]
gi|325158785|gb|EGC70931.1| 30S ribosomal protein S11 [Enterococcus casseliflavus ATCC 12755]
Length = 129
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI +G AH+ STFNNT + ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MAAKKVSRKRRVKKNIEAGIAHIHSTFNNTIVMITDTHGNALAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ ++EV V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETATKAAMEHGLRTVEVTVKGPGSGREAAIRSLQAAGLEVSAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|163859247|ref|YP_001633545.1| 30S ribosomal protein S11 [Bordetella petrii DSM 12804]
gi|293602600|ref|ZP_06685043.1| 30S ribosomal protein S11 [Achromobacter piechaudii ATCC 43553]
gi|311109578|ref|YP_003982431.1| 30S ribosomal protein S11 [Achromobacter xylosoxidans A8]
gi|226708335|sp|A9IHR9|RS11_BORPD RecName: Full=30S ribosomal protein S11
gi|163262975|emb|CAP45278.1| 30S ribosomal protein S11 [Bordetella petrii]
gi|292818972|gb|EFF78010.1| 30S ribosomal protein S11 [Achromobacter piechaudii ATCC 43553]
gi|310764267|gb|ADP19716.1| 30S ribosomal protein S11 [Achromobacter xylosoxidans A8]
gi|317401572|gb|EFV82201.1| 30S ribosomal protein S11 [Achromobacter xylosoxidans C54]
Length = 133
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ + R+R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKASTSGASRVRKKVKKNVSDGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+S++RAL A+G I SI D+T +
Sbjct: 61 KSTPFAAQVAAETAGRVALEYGIKTLEVRIKGPGPGRESSVRALNALGIKISSIADITPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|319760352|ref|YP_004124290.1| 30S ribosomal protein S11 [Candidatus Blochmannia vafer str. BVAF]
gi|318039066|gb|ADV33616.1| 30S ribosomal protein S11 [Candidatus Blochmannia vafer str. BVAF]
Length = 130
Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS S R R R +K I G AH+ ++FNNT +TI+D GNT+ W++ GF GSRK++
Sbjct: 1 MIKSSSLRSRKRVKKQITDGIAHIHASFNNTIVTISDRQGNTLGWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + C+ Q +G+ +LEV V G G GR+SA+RAL A GF I+SI DVT I HN
Sbjct: 61 PFAAQIAAERCADIVQEYGVKNLEVMVKGPGPGRESAVRALNASGFNIISITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPSKKRRV 130
>gi|33357888|pdb|1P6G|K Chain K, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357965|pdb|1P87|K Chain K, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754049|pdb|2AVY|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|83754105|pdb|2AW7|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
gi|118138063|pdb|2I2P|K Chain K, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138134|pdb|2I2U|K Chain K, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|157836033|pdb|2QOU|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s Ribosome,
With Spectinomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|157836081|pdb|2QOW|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836137|pdb|2QOY|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836185|pdb|2QP0|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429708|pdb|2QAL|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429760|pdb|2QAN|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429818|pdb|2QB9|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429870|pdb|2QBB|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429922|pdb|2QBD|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429974|pdb|2QBF|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430028|pdb|2QBH|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430081|pdb|2QBJ|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431381|pdb|2Z4K|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431434|pdb|2Z4M|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|168988798|pdb|2VHO|K Chain K, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988819|pdb|2VHP|K Chain K, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107288|pdb|3DF1|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|197107340|pdb|3DF3|K Chain K, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|329666002|pdb|3J00|K Chain K, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 128
Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 88/128 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++PF
Sbjct: 1 AKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPF 60
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNGC
Sbjct: 61 AAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGC 120
Query: 122 RPRKRRRI 129
RP K+RR+
Sbjct: 121 RPPKKRRV 128
>gi|84515659|ref|ZP_01003020.1| 30S ribosomal protein S11 [Loktanella vestfoldensis SKA53]
gi|84510101|gb|EAQ06557.1| 30S ribosomal protein S11 [Loktanella vestfoldensis SKA53]
Length = 129
Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDTKRTKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|260438190|ref|ZP_05792006.1| 30S ribosomal protein S11 [Butyrivibrio crossotus DSM 2876]
gi|292809380|gb|EFF68585.1| 30S ribosomal protein S11 [Butyrivibrio crossotus DSM 2876]
Length = 130
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +TITD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 16 NVERGQAHIQSSFNNTIVTITDTEGNALSWASAGGLGFRGSRKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LIHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPVPHNGCRPPKRRRV 130
>gi|74316446|ref|YP_314186.1| 30S ribosomal protein S11 [Thiobacillus denitrificans ATCC 25259]
gi|91207685|sp|Q3SLM6|RS11_THIDA RecName: Full=30S ribosomal protein S11
gi|74055941|gb|AAZ96381.1| ribosomal protein S11 [Thiobacillus denitrificans ATCC 25259]
Length = 130
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +R+R + +KN+ G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MATKTAARVRKKVKKNVAEGIAHIHASFNNTIVTITDRQGNALSWATAGGAGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA ++ AQ +G+ +LEV++ G G GR+S +RAL A+GF IV+I DVT I HN
Sbjct: 61 PFAAQVAAENAGKMAQEYGVKNLEVRIKGPGPGRESTVRALNALGFKIVAISDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPSKKRRI 130
>gi|149912287|ref|ZP_01900858.1| 30S ribosomal protein S11 [Moritella sp. PE36]
gi|149804632|gb|EDM64691.1| 30S ribosomal protein S11 [Moritella sp. PE36]
Length = 120
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 63/120 (52%), Positives = 85/120 (70%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
R +K + G AHV ++FNNT +TITD GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 1 KRVKKQVADGIAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTPFAAQVAAER 60
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+ +G+ +LEV V G G GR+S++RAL AIGF I +I DVT I HNGCRP K+RR+
Sbjct: 61 AGEMAKEYGLKNLEVMVKGPGPGRESSIRALNAIGFKITNITDVTPIPHNGCRPPKKRRV 120
>gi|56695424|ref|YP_165772.1| 30S ribosomal protein S11 [Ruegeria pomeroyi DSS-3]
gi|62287368|sp|Q5LW33|RS11_SILPO RecName: Full=30S ribosomal protein S11
gi|56677161|gb|AAV93827.1| ribosomal protein S11 [Ruegeria pomeroyi DSS-3]
Length = 130
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 79/130 (60%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +R + +ERKNI SG AHV STFNNT+I I+D GN I+WSS +GF GSRK++
Sbjct: 1 MARDKTRTTKKKERKNIASGVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHN
Sbjct: 61 PYAAQLAAEDAGRKAQDHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|144900907|emb|CAM77771.1| 30S ribosomal protein S11 [Magnetospirillum gryphiswaldense MSR-1]
Length = 130
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 79/115 (68%), Positives = 92/115 (80%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG AHV STFNNT ITITD GNTI+WSS + GF GSRK++P+AAQVA +D KA
Sbjct: 16 NITSGVAHVNSTFNNTMITITDAQGNTISWSSSGMQGFKGSRKSTPYAAQVAAEDAGRKA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM +LEV+V G GAGR+SALRAL+A+GF+I SI DVT I HNGCRPRKRRR+
Sbjct: 76 MEHGMRTLEVEVKGPGAGRESALRALQAVGFSITSIRDVTPIPHNGCRPRKRRRV 130
>gi|71065082|ref|YP_263809.1| 30S ribosomal protein S11 [Psychrobacter arcticus 273-4]
gi|93005337|ref|YP_579774.1| 30S ribosomal protein S11 [Psychrobacter cryohalolentis K5]
gi|91207673|sp|Q4FUD3|RS11_PSYA2 RecName: Full=30S ribosomal protein S11
gi|123083420|sp|Q1QDG3|RS11_PSYCK RecName: Full=30S ribosomal protein S11
gi|71038067|gb|AAZ18375.1| SSU ribosomal protein S11P [Psychrobacter arcticus 273-4]
gi|92393015|gb|ABE74290.1| SSU ribosomal protein S11P [Psychrobacter cryohalolentis K5]
Length = 129
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R+++ G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKDTRSRKKVARRSVSEGIAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +++V V G G GR+SA+RAL A+G+ + SI DVT I HNG
Sbjct: 61 FAAQVAAEVAGKAAQEYGVKNIDVLVKGPGPGRESAVRALGALGYKVNSISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CR K+RR+
Sbjct: 121 CRAPKKRRV 129
>gi|33594505|ref|NP_882149.1| 30S ribosomal protein S11 [Bordetella pertussis Tohama I]
gi|33594776|ref|NP_882419.1| 30S ribosomal protein S11 [Bordetella parapertussis 12822]
gi|33599048|ref|NP_886608.1| 30S ribosomal protein S11 [Bordetella bronchiseptica RB50]
gi|187476572|ref|YP_784596.1| 30S ribosomal protein S11 [Bordetella avium 197N]
gi|59798863|sp|Q7VTA7|RS11_BORPE RecName: Full=30S ribosomal protein S11
gi|59798867|sp|Q7W2D1|RS11_BORPA RecName: Full=30S ribosomal protein S11
gi|59798873|sp|Q7WR99|RS11_BORBR RecName: Full=30S ribosomal protein S11
gi|123752387|sp|Q2L245|RS11_BORA1 RecName: Full=30S ribosomal protein S11
gi|33564581|emb|CAE43897.1| 30S ribosomal protein S11 [Bordetella pertussis Tohama I]
gi|33564852|emb|CAE39796.1| 30S ribosomal protein S11 [Bordetella parapertussis]
gi|33575094|emb|CAE30557.1| 30S ribosomal protein S11 [Bordetella bronchiseptica RB50]
gi|115421158|emb|CAJ47642.1| 30S ribosomal protein S11 [Bordetella avium 197N]
Length = 133
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ + R+R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKASTSGASRVRKKVKKNVSDGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+S++RAL A+G I SI D+T +
Sbjct: 61 KSTPFAAQVAAETAGRVAMEYGIKTLEVRIKGPGPGRESSVRALNALGIKISSIADITPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|330430073|gb|AEC21407.1| 30S ribosomal protein S11 [Pusillimonas sp. T7-7]
Length = 133
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ SR+R + +K++ G AHV ++FNNT ITITD GN ++W++ GF GSR
Sbjct: 1 MAKASNSGASRVRKKIKKSVSDGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEV++ G G GR+S++RAL A+G I SI D+T +
Sbjct: 61 KSTPFAAQVAAESAGRVALEYGIKTLEVRIKGPGPGRESSVRALNALGIKISSISDITPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|167767778|ref|ZP_02439831.1| hypothetical protein CLOSS21_02313 [Clostridium sp. SS2/1]
gi|317497069|ref|ZP_07955396.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710517|gb|EDS21096.1| hypothetical protein CLOSS21_02313 [Clostridium sp. SS2/1]
gi|291558881|emb|CBL37681.1| SSU ribosomal protein S11P [butyrate-producing bacterium SSC/2]
gi|316895614|gb|EFV17769.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 130
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++
Sbjct: 1 MAKVTKKSAKKRVKKNVQHGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + + A HG+ S++V V G G+GR++A+RAL A G + SI DVT + HN
Sbjct: 61 PYAAQMAAETATKAALVHGLKSVDVMVKGPGSGREAAIRALSAAGLEVTSISDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|307823464|ref|ZP_07653693.1| 30S ribosomal protein S11 [Methylobacter tundripaludum SV96]
gi|307735449|gb|EFO06297.1| 30S ribosomal protein S11 [Methylobacter tundripaludum SV96]
Length = 128
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M R R R +K + G HV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MASQN-RSRKRIKKEVADGIVHVHASFNNTIITITDRKGNALSWATSGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A GM +L+V + G G GR+SA+R+L +GF I +I DVT I HNG
Sbjct: 60 FAAQVAAEKAGSVALEFGMKNLDVMIKGPGPGRESAVRSLNNLGFKINNIVDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|172056166|ref|YP_001812626.1| ribosomal protein S11 [Exiguobacterium sibiricum 255-15]
gi|259494623|sp|B1YGX6|RS11_EXIS2 RecName: Full=30S ribosomal protein S11
gi|171988687|gb|ACB59609.1| ribosomal protein S11 [Exiguobacterium sibiricum 255-15]
Length = 131
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K R + + +KNI SG H+ STFNNT +TITD GN I+W++ +GF GSRK++PFA
Sbjct: 5 KQNVRSKRKVKKNIESGIVHIRSTFNNTIVTITDMQGNAISWATAGNMGFKGSRKSTPFA 64
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A++ + A ++GM ++EV V G GAGR++A+RAL+AIG + +I DVT + HNGCR
Sbjct: 65 AQLASETAAKTAMDNGMRTVEVNVKGPGAGREAAIRALQAIGLEVTAIRDVTPVPHNGCR 124
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 125 PPKRRRV 131
>gi|153871949|ref|ZP_02000982.1| Ribosomal protein S11 [Beggiatoa sp. PS]
gi|152071585|gb|EDN69018.1| Ribosomal protein S11 [Beggiatoa sp. PS]
Length = 129
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 84/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M R + +K++ G HV ++FNNT ITITD GN + W++ GF GSRK++P
Sbjct: 1 MANKEKRQPKKVKKHVTDGIVHVHASFNNTIITITDRQGNVLGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + G+ +LEV++ G G GR+SA+R+L A GF I SI DVT I HNG
Sbjct: 61 FAAQIAAEKVGNAVKEFGVKNLEVQIKGPGPGRESAVRSLNANGFKITSITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|167748455|ref|ZP_02420582.1| hypothetical protein ANACAC_03199 [Anaerostipes caccae DSM 14662]
gi|317472012|ref|ZP_07931344.1| 30S ribosomal protein S11 [Anaerostipes sp. 3_2_56FAA]
gi|167652447|gb|EDR96576.1| hypothetical protein ANACAC_03199 [Anaerostipes caccae DSM 14662]
gi|316900416|gb|EFV22398.1| 30S ribosomal protein S11 [Anaerostipes sp. 3_2_56FAA]
Length = 130
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 16 NVQHGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LVHGLKTVDVMVKGPGSGREAAIRALSAAGLEVTSIKDVTPVPHNGCRPPKRRRV 130
>gi|110678753|ref|YP_681760.1| 30S ribosomal protein S11 [Roseobacter denitrificans OCh 114]
gi|123172727|sp|Q16AB9|RS11_ROSDO RecName: Full=30S ribosomal protein S11
gi|109454869|gb|ABG31074.1| ribosomal protein S11 [Roseobacter denitrificans OCh 114]
Length = 129
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R++ + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKVRVKKKASKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|254486715|ref|ZP_05099920.1| ribosomal protein S11 [Roseobacter sp. GAI101]
gi|214043584|gb|EEB84222.1| ribosomal protein S11 [Roseobacter sp. GAI101]
Length = 129
Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MAREKTKTKRKVSKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDVGKKAQDHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|83312208|ref|YP_422472.1| 30S ribosomal protein S11 [Magnetospirillum magneticum AMB-1]
gi|123767953|sp|Q2W2L2|RS11_MAGMM RecName: Full=30S ribosomal protein S11
gi|82947049|dbj|BAE51913.1| Ribosomal protein S11 [Magnetospirillum magneticum AMB-1]
Length = 131
Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats.
Identities = 78/115 (67%), Positives = 91/115 (79%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG AHV +TFNNT ITITD GNTI+WSS + GF GSRK++P+AAQVA +D KA
Sbjct: 17 NITSGVAHVNATFNNTMITITDAQGNTISWSSAGMQGFKGSRKSTPYAAQVAAEDAGRKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM +LEV+V G GAGR+SALRAL+A+GF I SI DVT I HNGCRPRKRRR+
Sbjct: 77 SEHGMRTLEVEVKGPGAGRESALRALQAVGFQITSIRDVTPIPHNGCRPRKRRRV 131
>gi|154483163|ref|ZP_02025611.1| hypothetical protein EUBVEN_00864 [Eubacterium ventriosum ATCC
27560]
gi|149735971|gb|EDM51857.1| hypothetical protein EUBVEN_00864 [Eubacterium ventriosum ATCC
27560]
Length = 131
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 54/115 (46%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ ++FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 17 NVEHGQAHIQASFNNTIVTLTDAEGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKTVDVMVKGPGSGREAAIRALATCGLEVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|32491315|ref|NP_871569.1| 30S ribosomal protein S11 [Wigglesworthia glossinidia endosymbiont
of Glossina brevipalpis]
gi|29337189|sp|P59380|RS11_WIGBR RecName: Full=30S ribosomal protein S11
gi|25166522|dbj|BAC24712.1| rpsK [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 131
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + R + ++ I+ G AH+ ++FNNT +TITD GNT+ W++ GF GSRK+
Sbjct: 1 MSKKQNSSISRKKIKRQILEGIAHIHASFNNTIVTITDRQGNTLGWATSGGSGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + CS A+ +G+ +LE+ V G G GR+S +RAL + GF I +I DVT I H
Sbjct: 61 TPFAAQVAAEKCSEIAKEYGIKNLEIMVKGPGPGRESTIRALNSSGFKITNITDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|301628937|ref|XP_002943605.1| PREDICTED: 30S ribosomal protein S11-like [Xenopus (Silurana)
tropicalis]
Length = 134
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 71/134 (52%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MPKSPS-----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP+ R+R + RKNI G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAARVRKKVRKNISDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAMEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|71891997|ref|YP_277727.1| 30S ribosomal protein S11 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|91207731|sp|Q493I6|RS11_BLOPB RecName: Full=30S ribosomal protein S11
gi|71796103|gb|AAZ40854.1| 30S ribosomal subunit protein S11 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 130
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS + R R R +K I+ G AH+ ++FNNT ITI+D GNT+ W++ GF GSRK++
Sbjct: 1 MIKSSNLRARKRLKKQILDGVAHIHASFNNTIITISDKQGNTLGWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + C+ Q +G+ +LEV V G G GR+SA+RAL A GF I SI DVT I HN
Sbjct: 61 PFAAQIAAERCAEIVQEYGVKNLEVMVKGPGPGRESAVRALNAAGFHITSITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPSKKRRV 130
>gi|302669989|ref|YP_003829949.1| ribosomal protein S11 RpsK [Butyrivibrio proteoclasticus B316]
gi|302394462|gb|ADL33367.1| ribosomal protein S11 RpsK [Butyrivibrio proteoclasticus B316]
Length = 135
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQVA + + A
Sbjct: 21 NVEHGQAHIQSSFNNTIVTLTDAAGNALSWASAGGLGFKGSRKSTPYAAQVAAETATKAA 80
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G T+ SI DVT + HNGCRP KRRR+
Sbjct: 81 LIHGLKTVDVFVKGPGSGREAAIRALAASGLTVTSITDVTPVPHNGCRPPKRRRV 135
>gi|221064827|ref|ZP_03540932.1| ribosomal protein S11 [Comamonas testosteroni KF-1]
gi|264680562|ref|YP_003280472.1| ribosomal protein S11 [Comamonas testosteroni CNB-2]
gi|299532874|ref|ZP_07046261.1| 30S ribosomal protein S11 [Comamonas testosteroni S44]
gi|220709850|gb|EED65218.1| ribosomal protein S11 [Comamonas testosteroni KF-1]
gi|262211078|gb|ACY35176.1| ribosomal protein S11 [Comamonas testosteroni CNB-2]
gi|298719098|gb|EFI60068.1| 30S ribosomal protein S11 [Comamonas testosteroni S44]
Length = 134
Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats.
Identities = 72/134 (53%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MPKSPS-----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP+ R+R + RKNI G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAARVRKKVRKNISDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +LEV++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLEVEIKGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|153952887|ref|YP_001393652.1| 30S ribosomal protein S11 [Clostridium kluyveri DSM 555]
gi|219853552|ref|YP_002470674.1| hypothetical protein CKR_0209 [Clostridium kluyveri NBRC 12016]
gi|189040409|sp|A5N4S3|RS11_CLOK5 RecName: Full=30S ribosomal protein S11
gi|254765376|sp|B9DYD5|RS11_CLOK1 RecName: Full=30S ribosomal protein S11
gi|146345768|gb|EDK32304.1| RpsK [Clostridium kluyveri DSM 555]
gi|219567276|dbj|BAH05260.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 132
Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 90/126 (71%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R +ERKN+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAA
Sbjct: 7 KRTTRRKKERKNVEHGCAHIRSTFNNSIVTITDAAGNTLSWASAGGLGFRGSRKSTPFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + A HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP
Sbjct: 67 QMAAETSAKAAMEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRP 126
Query: 124 RKRRRI 129
KRRR+
Sbjct: 127 PKRRRV 132
>gi|121592836|ref|YP_984732.1| 30S ribosomal protein S11 [Acidovorax sp. JS42]
gi|222109616|ref|YP_002551880.1| 30S ribosomal protein s11 [Acidovorax ebreus TPSY]
gi|152060567|sp|A1W331|RS11_ACISJ RecName: Full=30S ribosomal protein S11
gi|254765382|sp|B9MBW0|RS11_DIAST RecName: Full=30S ribosomal protein S11
gi|120604916|gb|ABM40656.1| SSU ribosomal protein S11P [Acidovorax sp. JS42]
gi|221729060|gb|ACM31880.1| ribosomal protein S11 [Acidovorax ebreus TPSY]
Length = 134
Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats.
Identities = 71/134 (52%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKNI G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAQRVRKKVRKNISDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|159901449|ref|YP_001547696.1| 30S ribosomal protein S11 [Herpetosiphon aurantiacus ATCC 23779]
gi|226708378|sp|A9B435|RS11_HERA2 RecName: Full=30S ribosomal protein S11
gi|159894488|gb|ABX07568.1| ribosomal protein S11 [Herpetosiphon aurantiacus ATCC 23779]
Length = 137
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 66/116 (56%), Positives = 87/116 (75%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
KN+ G+AHV +TFNNT +TITDP GN + WSS GF GSRK++P+AAQV + + K
Sbjct: 22 KNVPRGQAHVQATFNNTIVTITDPAGNVVCWSSAGASGFKGSRKSTPYAAQVTAEQAARK 81
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A ++GM +EV V G GAGR+SA+RAL+A G ++++I DVT I HNGCRP KRRR+
Sbjct: 82 AMDNGMRVVEVYVKGPGAGRESAVRALQATGLSVIAITDVTPIPHNGCRPPKRRRV 137
>gi|163733784|ref|ZP_02141226.1| 30S ribosomal protein S11 [Roseobacter litoralis Och 149]
gi|161392895|gb|EDQ17222.1| 30S ribosomal protein S11 [Roseobacter litoralis Och 149]
Length = 129
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R++ + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKVRVKKKASKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|120609324|ref|YP_969002.1| 30S ribosomal protein S11 [Acidovorax citrulli AAC00-1]
gi|319764616|ref|YP_004128553.1| 30S ribosomal protein s11 [Alicycliphilus denitrificans BC]
gi|326315413|ref|YP_004233085.1| 30S ribosomal protein S11 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|330826873|ref|YP_004390176.1| 30S ribosomal protein S11 [Alicycliphilus denitrificans K601]
gi|152060564|sp|A1TJU0|RS11_ACIAC RecName: Full=30S ribosomal protein S11
gi|120587788|gb|ABM31228.1| SSU ribosomal protein S11P [Acidovorax citrulli AAC00-1]
gi|317119177|gb|ADV01666.1| 30S ribosomal protein S11 [Alicycliphilus denitrificans BC]
gi|323372249|gb|ADX44518.1| 30S ribosomal protein S11 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|329312245|gb|AEB86660.1| 30S ribosomal protein S11 [Alicycliphilus denitrificans K601]
Length = 134
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAQRVRKKVRKNVSDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|11466358|ref|NP_038361.1| ribosomal protein S11 [Mesostigma viride]
gi|14285755|sp|Q9MUU9|RR11_MESVI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|7259501|gb|AAF43802.1|AF166114_14 ribosomal protein S11 [Mesostigma viride]
Length = 130
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +I + ++ I G HV +TFNNT +TITD G ++WSS GF G++K +
Sbjct: 1 MAKQIRKIGVRKTKRKIPKGVVHVQATFNNTIVTITDVRGEVLSWSSAGACGFKGTKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM E+ +SG G+GR++A+RA++A G I I DVT I HN
Sbjct: 61 PFAAQTAAENAVRQVIDQGMKQAEIMISGPGSGRETAIRAIQAAGLGITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|241763533|ref|ZP_04761585.1| ribosomal protein S11 [Acidovorax delafieldii 2AN]
gi|241367264|gb|EER61604.1| ribosomal protein S11 [Acidovorax delafieldii 2AN]
Length = 134
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAQRVRKKVRKNVSDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A + G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIDQGIKNLDVEIKGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|238021613|ref|ZP_04602039.1| hypothetical protein GCWU000324_01513 [Kingella oralis ATCC 51147]
gi|237866227|gb|EEP67269.1| hypothetical protein GCWU000324_01513 [Kingella oralis ATCC 51147]
Length = 131
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK + G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+S++RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAESAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPSKKRRI 131
>gi|163745567|ref|ZP_02152927.1| 30S ribosomal protein S11 [Oceanibulbus indolifex HEL-45]
gi|161382385|gb|EDQ06794.1| 30S ribosomal protein S11 [Oceanibulbus indolifex HEL-45]
Length = 129
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKTKTKRKVSKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGRKAQDHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|240145851|ref|ZP_04744452.1| 30S ribosomal protein S11 [Roseburia intestinalis L1-82]
gi|257201999|gb|EEV00284.1| 30S ribosomal protein S11 [Roseburia intestinalis L1-82]
gi|291535454|emb|CBL08566.1| SSU ribosomal protein S11P [Roseburia intestinalis M50/1]
gi|291537905|emb|CBL11016.1| SSU ribosomal protein S11P [Roseburia intestinalis XB6B4]
Length = 130
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +TITD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 16 NVERGQAHIQSSFNNTIVTITDAEGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 LIHGLKTVDVMVKGPGSGREAAIRALSACGLEVTSIKDVTPVPHNGCRPPKRRRV 130
>gi|238922855|ref|YP_002936368.1| 30S ribosomal protein S11 [Eubacterium rectale ATCC 33656]
gi|238874527|gb|ACR74234.1| 30S ribosomal protein S11 [Eubacterium rectale ATCC 33656]
gi|291523755|emb|CBK89342.1| SSU ribosomal protein S11P [Eubacterium rectale DSM 17629]
gi|291528779|emb|CBK94365.1| SSU ribosomal protein S11P [Eubacterium rectale M104/1]
Length = 131
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/115 (47%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ ++FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQASFNNTIVTLTDAEGNALSWASAGGLGFRGSKKSTPYAAQMAAETATKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LIHGLKTVDVFVKGPGSGREAAIRALSACGLEVTSIRDVTPVPHNGCRPPKRRRV 131
>gi|296113775|ref|YP_003627713.1| 30S ribosomal protein S11 [Moraxella catarrhalis RH4]
gi|295921469|gb|ADG61820.1| 30S ribosomal protein S11 [Moraxella catarrhalis RH4]
gi|326562120|gb|EGE12448.1| 30S ribosomal protein S11 [Moraxella catarrhalis 7169]
gi|326564515|gb|EGE14741.1| 30S ribosomal protein S11 [Moraxella catarrhalis 46P47B1]
gi|326565698|gb|EGE15861.1| 30S ribosomal protein S11 [Moraxella catarrhalis 12P80B1]
gi|326566267|gb|EGE16419.1| 30S ribosomal protein S11 [Moraxella catarrhalis 103P14B1]
gi|326567081|gb|EGE17203.1| 30S ribosomal protein S11 [Moraxella catarrhalis BC1]
gi|326568345|gb|EGE18425.1| 30S ribosomal protein S11 [Moraxella catarrhalis BC7]
gi|326572246|gb|EGE22241.1| 30S ribosomal protein S11 [Moraxella catarrhalis BC8]
gi|326574588|gb|EGE24528.1| 30S ribosomal protein S11 [Moraxella catarrhalis O35E]
gi|326574844|gb|EGE24774.1| 30S ribosomal protein S11 [Moraxella catarrhalis 101P30B1]
gi|326576168|gb|EGE26083.1| 30S ribosomal protein S11 [Moraxella catarrhalis CO72]
Length = 130
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R+++ G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKDTRSRKKVARRSVSEGIAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAAQVA + AQ +G+ +++V V G G GR+SA+RAL A+G+ I SI DVT I HN
Sbjct: 61 FAAQVAAEVAGKTAQETYGVKNVDVLVKGPGPGRESAVRALGALGYKINSISDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|257064664|ref|YP_003144336.1| SSU ribosomal protein S11P [Slackia heliotrinireducens DSM 20476]
gi|256792317|gb|ACV22987.1| SSU ribosomal protein S11P [Slackia heliotrinireducens DSM 20476]
Length = 131
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSP--SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R++ +RKNI G+AH+ STFNNT ++ITDP GN IAW+S VGF GSRK+
Sbjct: 1 MAKKNVRTRVKRADRKNIAVGQAHIKSTFNNTIVSITDPQGNVIAWNSAGTVGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + C+ A HG+ + V V G G+GR++A+R+L+A G + SI D T I H
Sbjct: 61 TPFAAQMAAEQCAKNAMEHGLKKVAVFVKGPGSGRETAIRSLQAAGLEVTSIQDCTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPCKRRRV 131
>gi|196228478|ref|ZP_03127345.1| ribosomal protein S11 [Chthoniobacter flavus Ellin428]
gi|196227881|gb|EDY22384.1| ribosomal protein S11 [Chthoniobacter flavus Ellin428]
Length = 196
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/122 (51%), Positives = 88/122 (72%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
I+ + KN+ SG AH+V++FNNT +TITD +G+TI WSS GF GSRK++ +AAQ+
Sbjct: 75 IKAKGSKNVHSGIAHIVASFNNTIVTITDMNGSTIGWSSAGKCGFKGSRKSTAYAAQMVA 134
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
D +A HG+ +EV+V G GAGR+SA+RA++A+G I I DVT + HNGCRP K+R
Sbjct: 135 QDACRQAMGHGLKEVEVRVKGPGAGRESAVRAIQAVGLEISIIKDVTPVPHNGCRPPKQR 194
Query: 128 RI 129
R+
Sbjct: 195 RV 196
>gi|88854651|ref|ZP_01129317.1| 30S ribosomal protein S11 [marine actinobacterium PHSC20C1]
gi|88815812|gb|EAR25668.1| 30S ribosomal protein S11 [marine actinobacterium PHSC20C1]
Length = 132
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 65/127 (51%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ + R +E+KN+ G+AH+ STFNNT +TITDP G +AWSS VVGF GSRK++P+A
Sbjct: 6 SAARKPRRKEKKNVAVGQAHIKSTFNNTIVTITDPTGAVLAWSSSGVVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ++ + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT HNGCR
Sbjct: 66 AQMSAESAARQAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGSINDVTPQTHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|257454069|ref|ZP_05619343.1| 30S ribosomal protein S11 [Enhydrobacter aerosaccus SK60]
gi|257448547|gb|EEV23516.1| 30S ribosomal protein S11 [Enhydrobacter aerosaccus SK60]
Length = 129
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R+++ G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKDTRSRKKVTRRSVAEGVAHIHASFNNTIVTITDRQGNALAWATAGGQGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ +++V V G G GR+SA+RAL A+G+ I SI D+T I HNG
Sbjct: 61 FAAQVAAEVAGKAAQEYGVKNVDVLVKGPGPGRESAVRALGALGYKINSISDITPIPHNG 120
Query: 121 CRPRKRRRI 129
RP K+RR+
Sbjct: 121 TRPPKKRRV 129
>gi|187734945|ref|YP_001877057.1| ribosomal protein S11 [Akkermansia muciniphila ATCC BAA-835]
gi|187424997|gb|ACD04276.1| ribosomal protein S11 [Akkermansia muciniphila ATCC BAA-835]
Length = 183
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 84/126 (66%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
P ++ + KN+ +G HV STFNNT +T+TD GN I WSS +GF GSRK++ +A
Sbjct: 58 KPKILKAKGSKNVSTGVVHVSSTFNNTVVTVTDQRGNVIGWSSAGKMGFKGSRKSTAYAG 117
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QV D +A HG+ +EV+V G G+GR+SA+RA++ IG I SI DVT I HNGCRP
Sbjct: 118 QVVCQDACRQAMGHGLREVEVRVKGPGSGRESAVRAVQTIGIEITSIKDVTPIPHNGCRP 177
Query: 124 RKRRRI 129
K RR+
Sbjct: 178 PKARRV 183
>gi|92117121|ref|YP_576850.1| 30S ribosomal protein S11 [Nitrobacter hamburgensis X14]
gi|122990229|sp|Q1QN07|RS11_NITHX RecName: Full=30S ribosomal protein S11
gi|91800015|gb|ABE62390.1| SSU ribosomal protein S11P [Nitrobacter hamburgensis X14]
Length = 130
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/130 (67%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++
Sbjct: 1 MGKEAATRVRRRERKNIASGVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HN
Sbjct: 61 PYAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTAIPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|83648829|ref|YP_437264.1| 30S ribosomal protein S11 [Hahella chejuensis KCTC 2396]
gi|123739821|sp|Q2S935|RS11_HAHCH RecName: Full=30S ribosomal protein S11
gi|83636872|gb|ABC32839.1| Ribosomal protein S11 [Hahella chejuensis KCTC 2396]
Length = 129
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPGTRTRKKVKKTVVDGVAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V V G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGNAAAEYGLKNLDVLVKGPGPGRESAIRALNACGYKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|255283707|ref|ZP_05348262.1| 30S ribosomal protein S11 [Bryantella formatexigens DSM 14469]
gi|255265772|gb|EET58977.1| 30S ribosomal protein S11 [Bryantella formatexigens DSM 14469]
Length = 131
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAAGNALSWASAGGLGFKGSRKSTPYAAQMAAETATKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G ++SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKTVDVFVKGPGSGREAAIRALSACGLDVISITDVTPVPHNGCRPPKRRRV 131
>gi|147676681|ref|YP_001210896.1| 30S ribosomal protein S11 [Pelotomaculum thermopropionicum SI]
gi|189040424|sp|A5D5E6|RS11_PELTS RecName: Full=30S ribosomal protein S11
gi|146272778|dbj|BAF58527.1| ribosomal protein S11 [Pelotomaculum thermopropionicum SI]
Length = 129
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 95/129 (73%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + RERKNIVSG AH+ STFNNT +TITD GNTI+WSS VGF GSRK++P
Sbjct: 1 MARRVTRAKKRERKNIVSGVAHIKSTFNNTIVTITDTKGNTISWSSAGQVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A HG+ +EV V G GAGR++A+R+L+A G + I DVT I HNG
Sbjct: 61 FAAQMAAESAAREAMEHGLKEVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|15617095|ref|NP_240308.1| 30S ribosomal protein S11 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681847|ref|YP_002468233.1| 30S ribosomal protein S11 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682402|ref|YP_002468786.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471552|ref|ZP_05635551.1| 30S ribosomal protein S11 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387082|sp|P57568|RS11_BUCAI RecName: Full=30S ribosomal protein S11
gi|254765371|sp|B8D9S4|RS11_BUCA5 RecName: Full=30S ribosomal protein S11
gi|254765372|sp|B8D826|RS11_BUCAT RecName: Full=30S ribosomal protein S11
gi|25294661|pir||B84988 30S ribosomal protein S11 [imported] - Buchnera sp. (strain APS)
gi|10039160|dbj|BAB13194.1| 30S ribosomal protein S11 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622135|gb|ACL30291.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624690|gb|ACL30845.1| 30S ribosomal protein S11 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086223|gb|ADP66305.1| 30S ribosomal protein S11 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086800|gb|ADP66881.1| 30S ribosomal protein S11 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087387|gb|ADP67467.1| 30S ribosomal protein S11 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087884|gb|ADP67963.1| 30S ribosomal protein S11 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 131
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R R R +K I+ G AH+ ++FNNT +TITD GN + W++ GF GSRK+
Sbjct: 1 MVKNSTSIRTRKRVKKQILDGIAHIHASFNNTIVTITDRQGNALGWATSGGSGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + C+ +++G+ +LEV V G G GR+S +RAL A GF I +I DVT I H
Sbjct: 61 TPFAAQVAAERCAEIVKDYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|319778701|ref|YP_004129614.1| SSU ribosomal protein S11p (S14e) [Taylorella equigenitalis MCE9]
gi|317108725|gb|ADU91471.1| SSU ribosomal protein S11p (S14e) [Taylorella equigenitalis MCE9]
Length = 132
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPK---SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K S +R R + RK + G AHV ++FNNT ITITD GN ++W++ GF GSRK
Sbjct: 1 MAKASNSATRARKKVRKVVSEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA + A +G+SSL+V++ G G GR+S++RAL A+G I SI D+T +
Sbjct: 61 STPFAAQVAAESAGRVAMEYGISSLDVRIKGPGPGRESSVRALNALGIKITSISDITPVP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 HNGCRPPKRRRI 132
>gi|11467400|ref|NP_043257.1| ribosomal protein S11 [Cyanophora paradoxa]
gi|1350866|sp|P48136|RR11_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S11
gi|1016201|gb|AAA81288.1| ribosomal protein S11 [Cyanophora paradoxa]
Length = 130
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R +++KNI G AH+ STFNNT I+IT P G IAW+S GF G+RK +
Sbjct: 1 MARQIKRSGTTKQKKNIPVGVAHIQSTFNNTIISITSPTGEVIAWASAGSSGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + +A GM +EV +SG G+GR+ A++AL+A G I I D+T + HN
Sbjct: 61 PFAAQTAAENSARQAMEQGMRQIEVIISGPGSGREMAIKALQATGLEISLIRDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|323144987|ref|ZP_08079547.1| 30S ribosomal protein S11 [Succinatimonas hippei YIT 12066]
gi|322415266|gb|EFY06040.1| 30S ribosomal protein S11 [Succinatimonas hippei YIT 12066]
Length = 157
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R R +K I G AH+ ++FNNT +TI+D GN ++W++ GF GSRK++P+AAQV
Sbjct: 34 RRGGKRAKKQIADGVAHIHASFNNTIVTISDRQGNALSWATAGGSGFRGSRKSTPYAAQV 93
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + A+ +G+ +LEV V G G GR+S++RAL AIG+ I +I DVT I HNGCRP K
Sbjct: 94 AAERAGEAAKEYGVKNLEVLVKGPGPGRESSIRALNAIGYKITNITDVTPIPHNGCRPPK 153
Query: 126 RRRI 129
+RR+
Sbjct: 154 KRRV 157
>gi|75675579|ref|YP_318000.1| 30S ribosomal protein S11 [Nitrobacter winogradskyi Nb-255]
gi|85715107|ref|ZP_01046091.1| 30S ribosomal protein S11 [Nitrobacter sp. Nb-311A]
gi|91207663|sp|Q3SSU3|RS11_NITWN RecName: Full=30S ribosomal protein S11
gi|74420449|gb|ABA04648.1| SSU ribosomal protein S11P [Nitrobacter winogradskyi Nb-255]
gi|85698022|gb|EAQ35895.1| 30S ribosomal protein S11 [Nitrobacter sp. Nb-311A]
Length = 130
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/130 (67%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++
Sbjct: 1 MGKEATTRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HN
Sbjct: 61 PYAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTAIPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|160896493|ref|YP_001562075.1| 30S ribosomal protein S11 [Delftia acidovorans SPH-1]
gi|226708357|sp|A9BRX3|RS11_DELAS RecName: Full=30S ribosomal protein S11
gi|160362077|gb|ABX33690.1| ribosomal protein S11 [Delftia acidovorans SPH-1]
Length = 134
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 71/134 (52%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKNI G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPANNAAQRVRKKVRKNISDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|332107891|gb|EGJ09115.1| 30S ribosomal protein S11 [Rubrivivax benzoatilyticus JA2]
Length = 134
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+ + RKNI G AHV ++FNNT ITITD G ++AW+S GF GS
Sbjct: 1 MAKSPVNNAARRVSKKIRKNIADGIAHVHASFNNTIITITDRQGGSLAWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA ++ AQ G+ +L+V++ G G GR+S++RAL ++G I SI DVT
Sbjct: 61 RKSTPFAAQVAAENAGRAAQEQGIKNLDVRIKGPGPGRESSVRALASLGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|57339754|gb|AAW49864.1| hypothetical protein FTT0348 [synthetic construct]
Length = 164
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 27 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 86
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 87 FAAQVAAERAADMALEYGVKNVDVLVKGPGSGRDSAVRALNAKNLKVTSITDVTPLPHNG 146
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 147 CRPPKKRRV 155
>gi|71276502|ref|ZP_00652777.1| Ribosomal protein S11 [Xylella fastidiosa Dixon]
gi|71900587|ref|ZP_00682714.1| Ribosomal protein S11 [Xylella fastidiosa Ann-1]
gi|170729722|ref|YP_001775155.1| 30S ribosomal protein S11 [Xylella fastidiosa M12]
gi|226708438|sp|B0U5M1|RS11_XYLFM RecName: Full=30S ribosomal protein S11
gi|71162679|gb|EAO12406.1| Ribosomal protein S11 [Xylella fastidiosa Dixon]
gi|71729644|gb|EAO31748.1| Ribosomal protein S11 [Xylella fastidiosa Ann-1]
gi|167964515|gb|ACA11525.1| 30S ribosomal protein S11 [Xylella fastidiosa M12]
Length = 130
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R ++ I G AH+ ++FNNT +TITD GN++ W + GF GSRK +
Sbjct: 1 MAKQSVVKTKKRVKRVITDGVAHICASFNNTIVTITDRQGNSLFWCTSGASGFRGSRKCT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + ++GM SLEV+++G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAVLDYGMKSLEVRINGPGPGRESAVRSLSNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|114327241|ref|YP_744398.1| 30S ribosomal protein S11 [Granulibacter bethesdensis CGDNIH1]
gi|122327780|sp|Q0BUM7|RS11_GRABC RecName: Full=30S ribosomal protein S11
gi|114315415|gb|ABI61475.1| SSU ribosomal protein S11P [Granulibacter bethesdensis CGDNIH1]
Length = 131
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/131 (61%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 1 MPK--SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + + SR R +ERKNI SG AHV +TFNNT ITI+D GN IAWSS GF GSRK+
Sbjct: 1 MARNATSSRPRKKERKNISSGVAHVAATFNNTMITISDAQGNAIAWSSAGAQGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQVA +D KA+ HGM +LE++VSG G+GR+SALRAL+A+GF I +I D T I H
Sbjct: 61 TPYAAQVAAEDAGRKAREHGMETLEIEVSGPGSGRESALRALQAVGFAITAIRDTTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRPRKRRR+
Sbjct: 121 NGCRPRKRRRV 131
>gi|121997626|ref|YP_001002413.1| 30S ribosomal protein S11 [Halorhodospira halophila SL1]
gi|152060593|sp|A1WV99|RS11_HALHL RecName: Full=30S ribosomal protein S11
gi|121589031|gb|ABM61611.1| SSU ribosomal protein S11P [Halorhodospira halophila SL1]
Length = 131
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ SR + + ++ + G AH+ +TFNNT ITITD GN ++W+S GF GSRK+
Sbjct: 1 MAKASSRGGGKKKVKRTVSDGVAHINATFNNTLITITDRQGNALSWASAGGSGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA++ + AQ++G+ ++EV+V G G GR+SA+RAL A+G+ I +I DV+ I H
Sbjct: 61 TPFAAQVASETAARAAQDYGLKNVEVRVKGPGPGRESAVRALNAVGYRITNISDVSPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|121609262|ref|YP_997069.1| 30S ribosomal protein S11 [Verminephrobacter eiseniae EF01-2]
gi|152060830|sp|A1WK94|RS11_VEREI RecName: Full=30S ribosomal protein S11
gi|121553902|gb|ABM58051.1| SSU ribosomal protein S11P [Verminephrobacter eiseniae EF01-2]
Length = 134
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPVNNAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A + G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIDQGIKNLDVEIRGPGPGRESSVRALGALGIRITSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|295698628|ref|YP_003603283.1| ribosomal protein S11 [Candidatus Riesia pediculicola USDA]
gi|291157490|gb|ADD79935.1| ribosomal protein S11 [Candidatus Riesia pediculicola USDA]
Length = 147
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ R + + RK ++ G AH+ ++FNNT +TITD GNT+AW++ GF GSRK++PFA
Sbjct: 21 KNSIRNKRKIRKQVLDGIAHIHASFNNTIVTITDRKGNTLAWATSGGSGFRGSRKSTPFA 80
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+AT+ CS + +G+ +LEV V G G GR+SA+R L A+GF I +I DVT I HNGCR
Sbjct: 81 AQIATERCSESVKEYGVKNLEVMVKGPGPGRESAIRTLHAVGFQITNIIDVTPIPHNGCR 140
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 141 PPKKRRV 147
>gi|33519681|ref|NP_878513.1| 30S ribosomal protein S11 [Candidatus Blochmannia floridanus]
gi|59798859|sp|Q7VQC5|RS11_BLOFL RecName: Full=30S ribosomal protein S11
gi|33517344|emb|CAD83729.1| 30S ribosomal subunit protein S11 [Candidatus Blochmannia
floridanus]
Length = 130
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS S R+R R +K + G AH+ ++FNNT +TI+D GNT+ W++ GF GSRK++
Sbjct: 1 MIKSSSLRLRKRIKKQVTDGIAHIHASFNNTIVTISDRQGNTLGWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + C+ Q +G+ +LEV V G G GR+SA+RAL A GF I+SI DVT I HN
Sbjct: 61 PFAAQIAAERCAEIVQEYGVKNLEVMVKGPGPGRESAVRALNAAGFHIISIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPAKKRRV 130
>gi|251772516|gb|EES53082.1| ribosomal protein S11 [Leptospirillum ferrodiazotrophum]
Length = 128
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/122 (53%), Positives = 84/122 (68%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
+ RE+KNI G H+ ++FNNT I+I+D G+ IAWSS F GSRK++PFAAQ A
Sbjct: 7 TKRREKKNIPVGIVHIHASFNNTIISISDSKGDVIAWSSSGAQSFKGSRKSTPFAAQKAA 66
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ S KA + GM + EV V G G+GR+SA+RAL+ +G I I DVT I HNGCRP KRR
Sbjct: 67 EIASKKAADMGMKACEVYVKGPGSGRESAIRALQTVGIKISLIKDVTPIPHNGCRPPKRR 126
Query: 128 RI 129
R+
Sbjct: 127 RV 128
>gi|71842331|ref|YP_277419.1| ribosomal protein S11 [Emiliania huxleyi]
gi|91207750|sp|Q4G348|RR11_EMIHU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|60101574|gb|AAX13918.1| ribosomal protein S11 [Emiliania huxleyi]
Length = 130
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + +K + +G H+ STFNNT + ITD GNT+ W+S GF G++K++
Sbjct: 1 MIKQVKRFTSKKSKKTVNAGIVHIKSTFNNTIVNITDKQGNTLFWASAGGCGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A GM EV +SG G GR++A+RAL++ G ++ I D+T + HN
Sbjct: 61 PFAAQSAAEKVGSMAVEQGMKQAEVIISGPGNGRETAIRALQSCGLEVLLIKDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|21672747|ref|NP_660814.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009157|sp|Q8K972|RS11_BUCAP RecName: Full=30S ribosomal protein S11
gi|21623393|gb|AAM68025.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 130
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ S R R R +K I G AH+ ++FNNT +TITD GN + W++ GF GSRK++
Sbjct: 1 MVKNSSVRTRKRVKKQITDGIAHIHASFNNTIVTITDRQGNALGWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + C+ +++G+ +LEV V G G GR+S +RAL A GF I +I DVT I HN
Sbjct: 61 PFAAQIAAERCAEIVKDYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|54778764|gb|AAV39598.1| ribosomal protein S11 [synthetic construct]
Length = 156
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 88/128 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++PF
Sbjct: 26 AKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPF 85
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNGC
Sbjct: 86 AAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGC 145
Query: 122 RPRKRRRI 129
RP K+RR+
Sbjct: 146 RPPKKRRV 153
>gi|5913930|dbj|BAA84523.1| ribosomal protein S11 [Shewanella violacea]
Length = 135
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 68/126 (53%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KSPSR R R RK + G AH+ ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKSPSRSPRKRVRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ++G+ +LEV V G G GR+SA+RAL ++G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGVAAQDYGVKNLEVFVKGPGPGRESAIRALNSVGYKITNITDVTPIPHN 120
Query: 120 GCRPRK 125
GCRP K
Sbjct: 121 GCRPPK 126
>gi|148652260|ref|YP_001279353.1| 30S ribosomal protein S11 [Psychrobacter sp. PRwf-1]
gi|172048489|sp|A5WCL2|RS11_PSYWF RecName: Full=30S ribosomal protein S11
gi|148571344|gb|ABQ93403.1| SSU ribosomal protein S11P [Psychrobacter sp. PRwf-1]
Length = 130
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R+++ G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKDTRGRKKTARRSVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAAQVA + AQ +G+ +++V V G G GR+SA+RAL A+G+ I SI DVT I HN
Sbjct: 61 FAAQVAAEVAGKAAQETYGVKNVDVLVKGPGPGRESAVRALGALGYKINSISDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|332040529|gb|EGI76905.1| 30S ribosomal protein S11 [Hylemonella gracilis ATCC 19624]
Length = 134
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKAPANTAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I I DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALAALGIRINLISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 MPHNGCRPQKRRRI 134
>gi|114771244|ref|ZP_01448664.1| 30S ribosomal protein S11 [alpha proteobacterium HTCC2255]
gi|114548169|gb|EAU51056.1| 30S ribosomal protein S11 [alpha proteobacterium HTCC2255]
Length = 128
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R++ +ERKNI +G AH+ S+FNNT+I I D GN IAWSS +GF GSRK++P
Sbjct: 1 MAREA-RMKRKERKNITAGVAHINSSFNNTKILIADAQGNAIAWSSAGTMGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL AIG + SI DVT +AHNG
Sbjct: 60 YAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAIGLNVTSIRDVTPMAHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|91786409|ref|YP_547361.1| 30S ribosomal protein S11 [Polaromonas sp. JS666]
gi|123165433|sp|Q12G79|RS11_POLSJ RecName: Full=30S ribosomal protein S11
gi|91695634|gb|ABE42463.1| SSU ribosomal protein S11P [Polaromonas sp. JS666]
Length = 134
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 71/134 (52%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MPKSPS-----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSPS R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPSNNAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRINSIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|292492444|ref|YP_003527883.1| ribosomal protein S11 [Nitrosococcus halophilus Nc4]
gi|291581039|gb|ADE15496.1| ribosomal protein S11 [Nitrosococcus halophilus Nc4]
Length = 127
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R ++ +V G AH+ ++FNNT +TITD GNT+AW++ GF GSRK++P
Sbjct: 1 MAKASA--KKRVKRVVVDGIAHIHASFNNTIVTITDRQGNTLAWATSGGSGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ GM +LEV+V G G GR+SA RAL +GF + +I DVT I HNG
Sbjct: 59 FAAQVAAEKAGRVAQEMGMKNLEVRVKGPGPGRESAARALNNVGFKVTNIADVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|328543381|ref|YP_004303490.1| 30S ribosomal protein S11 [Polymorphum gilvum SL003B-26A1]
gi|326413126|gb|ADZ70189.1| 30S ribosomal protein S11 [Polymorphum gilvum SL003B-26A1]
Length = 129
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 86/129 (66%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKDTTRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNTISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA HGM +LEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAARKATEHGMRTLEVEVRGPGSGRESALRALQAAGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|327399497|ref|YP_004340366.1| 30S ribosomal protein S11 [Hippea maritima DSM 10411]
gi|327182126|gb|AEA34307.1| 30S ribosomal protein S11 [Hippea maritima DSM 10411]
Length = 128
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ SG AH+ +TFNNT ITITD GN + WSS GF G+RK +PFAAQ+A ++ + KA
Sbjct: 14 NVASGIAHIQATFNNTIITITDQDGNVLCWSSAGDSGFKGTRKGTPFAAQLAAENVAKKA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM ++V+V G G GR++A+R+L++ G + SI DVT I HNGCRP KRRR+
Sbjct: 74 MSMGMKEIDVRVKGPGPGRETAIRSLQSAGLRVKSIKDVTPIPHNGCRPPKRRRV 128
>gi|121603258|ref|YP_980587.1| 30S ribosomal protein S11 [Polaromonas naphthalenivorans CJ2]
gi|152060804|sp|A1VJ38|RS11_POLNA RecName: Full=30S ribosomal protein S11
gi|120592227|gb|ABM35666.1| SSU ribosomal protein S11P [Polaromonas naphthalenivorans CJ2]
Length = 134
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M KSP R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKSPNNSAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRINSIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|120553675|ref|YP_958026.1| 30S ribosomal protein S11 [Marinobacter aquaeolei VT8]
gi|149376661|ref|ZP_01894420.1| Ribosomal protein S11 [Marinobacter algicola DG893]
gi|152060789|sp|A1TYM0|RS11_MARAV RecName: Full=30S ribosomal protein S11
gi|120323524|gb|ABM17839.1| SSU ribosomal protein S11P [Marinobacter aquaeolei VT8]
gi|149359034|gb|EDM47499.1| Ribosomal protein S11 [Marinobacter algicola DG893]
Length = 129
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TI+D GN ++W++ GF GSRK++P
Sbjct: 1 MAKPGTRTRKKVKKTVVDGVAHIHASFNNTIVTISDRQGNVLSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGNAAAEYGLKNLDVEVKGPGPGRESAVRALNACGYKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|126728200|ref|ZP_01744016.1| 30S ribosomal protein S11 [Sagittula stellata E-37]
gi|126711165|gb|EBA10215.1| 30S ribosomal protein S11 [Sagittula stellata E-37]
Length = 131
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 76/131 (58%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + R + + KNI +G AHV STFNNT+I I+D GN I+WSS +GF GSRK+
Sbjct: 1 MARDTRRSGGKKKVSKNIAAGVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT IAH
Sbjct: 61 TPYAAQLAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|154248692|ref|YP_001419650.1| ribosomal protein S11 [Xanthobacter autotrophicus Py2]
gi|226708436|sp|A7IPP7|RS11_XANP2 RecName: Full=30S ribosomal protein S11
gi|154162777|gb|ABS69993.1| ribosomal protein S11 [Xanthobacter autotrophicus Py2]
Length = 129
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 83/129 (64%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ RERKNI SG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEATRVKRRERKNIASGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA HGM +LEV+VSG G+GR+SALRAL+A GF + SI DVT I HNG
Sbjct: 61 YAAQVAAEDAARKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFLVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|224370667|ref|YP_002604831.1| RpsK [Desulfobacterium autotrophicum HRM2]
gi|223693384|gb|ACN16667.1| RpsK [Desulfobacterium autotrophicum HRM2]
Length = 131
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 71/115 (61%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ STFNNT +TITD GNTI+WSS + GF GSRK++PFAA++A +D AKA
Sbjct: 17 NISTGVVHIQSTFNNTIVTITDEIGNTISWSSSGIQGFKGSRKSTPFAAKLAAEDAGAKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++ V V G GAGR+SALRAL A GF I I DVT +AHNGCRP KRRR+
Sbjct: 77 MEHGMKNVSVYVKGPGAGRESALRALHAQGFNISFIKDVTPVAHNGCRPPKRRRV 131
>gi|28198375|ref|NP_778689.1| 30S ribosomal protein S11 [Xylella fastidiosa Temecula1]
gi|71901054|ref|ZP_00683164.1| Ribosomal protein S11 [Xylella fastidiosa Ann-1]
gi|182681016|ref|YP_001829176.1| 30S ribosomal protein S11 [Xylella fastidiosa M23]
gi|29839504|sp|P59586|RS11_XYLFT RecName: Full=30S ribosomal protein S11
gi|226708437|sp|B2I8J1|RS11_XYLF2 RecName: Full=30S ribosomal protein S11
gi|28056445|gb|AAO28338.1| 30S ribosomal protein S11 [Xylella fastidiosa Temecula1]
gi|71729181|gb|EAO31302.1| Ribosomal protein S11 [Xylella fastidiosa Ann-1]
gi|182631126|gb|ACB91902.1| ribosomal protein S11 [Xylella fastidiosa M23]
gi|307579485|gb|ADN63454.1| 30S ribosomal protein S11 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 130
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R ++ I G AH+ ++FNNT +TITD GN++ W + GF GSRK +
Sbjct: 1 MSKQSVVKTKKRVKRVITDGVAHICASFNNTIVTITDRQGNSLFWCTSGASGFRGSRKCT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + ++GM SLEV+++G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAVLDYGMKSLEVRINGPGPGRESAVRSLSNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|300857221|ref|YP_003782205.1| 30S ribosomal protein S11 [Clostridium ljungdahlii DSM 13528]
gi|300437336|gb|ADK17103.1| 30S ribosomal protein S11 [Clostridium ljungdahlii DSM 13528]
Length = 132
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIRSTFNNSIVTITDAAGNTLSWASAGGLGFRGSRKSTPFAAQMAAETSAKAA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|239818005|ref|YP_002946915.1| 30S ribosomal protein S11 [Variovorax paradoxus S110]
gi|319796382|ref|YP_004158022.1| 30S ribosomal protein s11 [Variovorax paradoxus EPS]
gi|259494640|sp|C5CQ77|RS11_VARPS RecName: Full=30S ribosomal protein S11
gi|239804582|gb|ACS21649.1| ribosomal protein S11 [Variovorax paradoxus S110]
gi|315598845|gb|ADU39911.1| 30S ribosomal protein S11 [Variovorax paradoxus EPS]
Length = 134
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/134 (51%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKAPANNAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAVEQGIKNLDVEIKGPGPGRESSVRALAALGIRINSIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|171060595|ref|YP_001792944.1| 30S ribosomal protein S11 [Leptothrix cholodnii SP-6]
gi|226708382|sp|B1Y8B3|RS11_LEPCP RecName: Full=30S ribosomal protein S11
gi|170778040|gb|ACB36179.1| ribosomal protein S11 [Leptothrix cholodnii SP-6]
Length = 134
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 70/134 (52%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P R+ + RKNI G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKAPVNNAARRVSKKVRKNIADGVAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA + AQ G+ +L+VK+ G G GR+S++RAL ++G I SI DVT
Sbjct: 61 RKSTPFAAQVAAEVAGRAAQEQGIKNLDVKIKGPGPGRESSVRALASLGIRIASISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|158424155|ref|YP_001525447.1| 30S ribosomal protein S11 [Azorhizobium caulinodans ORS 571]
gi|172047975|sp|A8IAN8|RS11_AZOC5 RecName: Full=30S ribosomal protein S11
gi|158331044|dbj|BAF88529.1| ribosomal protein S11 [Azorhizobium caulinodans ORS 571]
Length = 129
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 82/129 (63%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ RERKNI SG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEAARVKRRERKNIASGVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KA HGM +LEV+VSG G+GR+SALRAL+A GF + SI DVT I HNG
Sbjct: 61 YAAQLAAEDAARKAAEHGMRTLEVEVSGPGSGRESALRALQAAGFLVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|289209306|ref|YP_003461372.1| 30S ribosomal protein S11 [Thioalkalivibrio sp. K90mix]
gi|288944937|gb|ADC72636.1| 30S ribosomal protein S11 [Thioalkalivibrio sp. K90mix]
Length = 129
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ +R + + RKNI G AHV +TFNNT ITITD GNTI+W++ GF GSRK++P
Sbjct: 1 MAQAQTRTKKKVRKNIAEGVAHVYATFNNTIITITDRQGNTISWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A HG+ +L+V V G G GR+SA+RAL GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGSAAAEHGVKNLDVMVRGPGPGRESAVRALNNAGFKITNISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|107103756|ref|ZP_01367674.1| hypothetical protein PaerPA_01004827 [Pseudomonas aeruginosa PACS2]
Length = 114
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 60/113 (53%), Positives = 80/113 (70%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++PFAAQVA + A
Sbjct: 2 VDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTPFAAQVAAERAGQAALE 61
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +L+V V G G GR+SA+RAL A G+ I SI DVT I HNGCRP K+RR+
Sbjct: 62 YGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNGCRPPKKRRV 114
>gi|223983945|ref|ZP_03634105.1| hypothetical protein HOLDEFILI_01386 [Holdemania filiformis DSM
12042]
gi|223964137|gb|EEF68489.1| hypothetical protein HOLDEFILI_01386 [Holdemania filiformis DSM
12042]
Length = 130
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R RKN+ G AH+ STFNNT +TITD GN IAWSS +GF GSRK++
Sbjct: 1 MAKVKQTSRKRRVRKNVARGVAHIHSTFNNTIVTITDESGNAIAWSSAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + A +HGM +EV V G G GR++A+R+L+ G I I DVT I HN
Sbjct: 61 PFAAQMAGEAAGKAAVDHGMKVVEVNVKGPGPGREAAVRSLQTAGLEITVINDVTPIPHN 120
Query: 120 GCRPRKRRR 128
GCRP KR R
Sbjct: 121 GCRPPKRPR 129
>gi|171462903|ref|YP_001797016.1| ribosomal protein S11 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226708397|sp|B1XSS5|RS11_POLNS RecName: Full=30S ribosomal protein S11
gi|171192441|gb|ACB43402.1| ribosomal protein S11 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 135
Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats.
Identities = 62/119 (52%), Positives = 82/119 (68%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+ +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 17 KVKKNVADGIAHVHTSFNNTIITITDRQGNALSWATSGGQGFKGSRKSTPFAAQVAAEVA 76
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A G+ SLE ++ G G GR+SA+RAL ++G I I DVT + HNGCRP KRRRI
Sbjct: 77 GKTAIECGIKSLEAQIKGPGPGRESAVRALNSLGIKITEIQDVTPVPHNGCRPPKRRRI 135
>gi|160941044|ref|ZP_02088382.1| hypothetical protein CLOBOL_05937 [Clostridium bolteae ATCC
BAA-613]
gi|158435993|gb|EDP13760.1| hypothetical protein CLOBOL_05937 [Clostridium bolteae ATCC
BAA-613]
Length = 134
Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats.
Identities = 63/134 (47%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRI-----RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K S + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS
Sbjct: 1 MAKKVSTTAKKVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++P+AAQ+A + + A HG+ S++V V G G+GR++A+RAL+A G + SI DVT
Sbjct: 61 RKSTPYAAQMAAETATKAALVHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRR+
Sbjct: 121 VPHNGCRPPKRRRV 134
>gi|255526605|ref|ZP_05393512.1| ribosomal protein S11 [Clostridium carboxidivorans P7]
gi|296187294|ref|ZP_06855690.1| 30S ribosomal protein S11 [Clostridium carboxidivorans P7]
gi|255509713|gb|EET86046.1| ribosomal protein S11 [Clostridium carboxidivorans P7]
gi|296048165|gb|EFG87603.1| 30S ribosomal protein S11 [Clostridium carboxidivorans P7]
Length = 132
Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 82/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AH+ STFNN+ +TITD GN ++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 19 VEHGCAHIKSTFNNSIVTITDAVGNALSWASAGGLGFRGSRKSTPFAAQMAAETSAKAAM 78
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 79 EHGLKSVEVYVKGPGAGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|163760823|ref|ZP_02167902.1| putative 30S ribosomal protein S11 [Hoeflea phototrophica DFL-43]
gi|162281867|gb|EDQ32159.1| putative 30S ribosomal protein S11 [Hoeflea phototrophica DFL-43]
Length = 129
Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats.
Identities = 86/129 (66%), Positives = 102/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ RERKNI SG AHV STFNNT ITITD GN I+WSS GF GSRK++P
Sbjct: 1 MAKEAARVKRRERKNISSGVAHVNSTFNNTMITITDAQGNAISWSSAGSKGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D + KAQ+HGM SLEV+V G G+GR+SALRAL+A GFTI SI DVT I HNG
Sbjct: 61 FAAQMAAEDAAKKAQDHGMKSLEVEVCGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 121 CRPRKKRRV 129
>gi|146340080|ref|YP_001205128.1| 30S ribosomal protein S11 [Bradyrhizobium sp. ORS278]
gi|152060578|sp|A4YSL5|RS11_BRASO RecName: Full=30S ribosomal protein S11
gi|146192886|emb|CAL76891.1| 30S ribosomal subunit protein S11 [Bradyrhizobium sp. ORS278]
Length = 129
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 1 MAKEAARVRRRERKNIASGVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|291562746|emb|CBL41562.1| SSU ribosomal protein S11P [butyrate-producing bacterium SS3/4]
Length = 133
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 61/133 (45%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
Query: 1 MPKSPSRIRNRERKNI----VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K S + +K + G+AH+ S+FNNT +T+TD GN ++W+S +GF GSR
Sbjct: 1 MAKKVSTAKKVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + A HG+ S++V V G G+GR++A+RAL+A G + SI DVT +
Sbjct: 61 KSTPYAAQMAAETATKAALVHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 PHNGCRPPKRRRV 133
>gi|221126763|ref|XP_002164994.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
gi|260222205|emb|CBA31535.1| 30S ribosomal protein S11 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 134
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKAPANNAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I I DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAALEQGIKNLDVEIKGPGPGRESSVRALAALGIRINMIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|114319642|ref|YP_741325.1| 30S ribosomal protein S11 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312436|sp|Q0ABF2|RS11_ALHEH RecName: Full=30S ribosomal protein S11
gi|114226036|gb|ABI55835.1| SSU ribosomal protein S11P [Alkalilimnicola ehrlichii MLHE-1]
Length = 130
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +R R R ++ +V G AH+ +TFNNT ITITD GN +AW+S GF GSRK++
Sbjct: 1 MAKAATRSRTKRAKRTVVDGIAHINATFNNTIITITDRQGNGLAWASAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA++ A ++G+ +LEV+V G G GR+SA+RAL A+G+ I +I DV+ I HN
Sbjct: 61 PFAAQVASERAGRAALDYGLKNLEVRVKGPGPGRESAVRALNAVGYRITNISDVSPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|261854972|ref|YP_003262255.1| 30S ribosomal protein S11 [Halothiobacillus neapolitanus c2]
gi|261835441|gb|ACX95208.1| 30S ribosomal protein S11 [Halothiobacillus neapolitanus c2]
Length = 129
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R + ++ + AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSNAPARKKIKRVVTDAVAHVHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +++V++ G G GR+S +RAL ++GF + I DVT I HNG
Sbjct: 61 FAAQVAAERAGEAAKAYGVKNIDVEIKGPGPGRESTIRALNSVGFKVGVITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|312144222|ref|YP_003995668.1| 30S ribosomal protein S11 [Halanaerobium sp. 'sapolanicus']
gi|311904873|gb|ADQ15314.1| 30S ribosomal protein S11 [Halanaerobium sp. 'sapolanicus']
Length = 132
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G+AH+ STFNNT I+ITD G +AWSS VG+ GSRK++PFAAQ+A ++ + +A
Sbjct: 18 NIEKGQAHIKSTFNNTIISITDTEGKVVAWSSAGKVGYKGSRKSTPFAAQLAAENVADEA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ G+ +E+ V G G+GR+SA+R L+A G + I D+T I HNGCRP KRRRI
Sbjct: 78 KDMGLKEIEIFVKGPGSGRESAIRTLQAAGLNVTLIKDITPIPHNGCRPPKRRRI 132
>gi|209884836|ref|YP_002288693.1| ribosomal protein S11 [Oligotropha carboxidovorans OM5]
gi|209873032|gb|ACI92828.1| ribosomal protein S11 [Oligotropha carboxidovorans OM5]
Length = 134
Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV S+FNNT ITITD GNTIAWSS +GF GSRK++P
Sbjct: 6 MAKEVARVRRRERKNIASGVAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 65
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D S KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 66 YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 125
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 126 CRPRKRRRV 134
>gi|126666790|ref|ZP_01737767.1| 30S ribosomal protein S11 [Marinobacter sp. ELB17]
gi|126628835|gb|EAZ99455.1| 30S ribosomal protein S11 [Marinobacter sp. ELB17]
Length = 129
Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R R + +K +V G AH+ ++FNNT +TI+D GN ++W++ GF GSRK++P
Sbjct: 1 MAKPGTRTRKKVKKTVVDGVAHIHASFNNTIVTISDRQGNVLSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V+V G G GR+SA+RAL + G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGNAAAEYGLKNLDVEVKGPGPGRESAVRALNSCGYKINNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|162446983|ref|YP_001620115.1| 30S ribosomal protein S11 [Acholeplasma laidlawii PG-8A]
gi|189040400|sp|A9NEF9|RS11_ACHLI RecName: Full=30S ribosomal protein S11
gi|161985090|gb|ABX80739.1| small subunit ribosomal protein S11 [Acholeplasma laidlawii PG-8A]
Length = 130
Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats.
Identities = 64/127 (50%), Positives = 88/127 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R RKNI SG AH+ +TFNNT +TITDP GN I+WSS +G GSRK++PF
Sbjct: 3 AQKRKTTKRRVRKNIPSGIAHIHTTFNNTIVTITDPAGNAISWSSAGALGIKGSRKSTPF 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+ ++ + A ++GM+ +EV V G G GR++A+R+L+A G I +I DVT + HNGC
Sbjct: 63 AAQLTSEAAAKGAMDNGMARVEVYVKGPGPGREAAIRSLQAAGLEITAIKDVTPVPHNGC 122
Query: 122 RPRKRRR 128
RP KR R
Sbjct: 123 RPPKRPR 129
>gi|254785102|ref|YP_003072530.1| 30S ribosomal protein S11 [Teredinibacter turnerae T7901]
gi|259494636|sp|C5BQ84|RS11_TERTT RecName: Full=30S ribosomal protein S11
gi|237685746|gb|ACR13010.1| ribosomal protein S11 [Teredinibacter turnerae T7901]
Length = 130
Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats.
Identities = 59/112 (52%), Positives = 82/112 (73%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++FNNT +TITD GNT++W++ GF GSRK++PFAAQVA + AQ +
Sbjct: 19 DGIAHIHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKSTPFAAQVAAERAGQAAQEY 78
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +L+V+V G G GR+SA+RAL +G+ I +I DVT I HNGCRP K+RR+
Sbjct: 79 GLKNLDVEVKGPGPGRESAVRALNNVGYKITNITDVTPIPHNGCRPPKKRRV 130
>gi|89070529|ref|ZP_01157818.1| 30S ribosomal protein S11 [Oceanicola granulosus HTCC2516]
gi|89043836|gb|EAR50034.1| 30S ribosomal protein S11 [Oceanicola granulosus HTCC2516]
Length = 131
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + R + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK+
Sbjct: 1 MARDTRRSGGKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A GF I SI DVT IAH
Sbjct: 61 TPYAAQMAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVTPIAH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|229823512|ref|ZP_04449581.1| hypothetical protein GCWU000282_00810 [Catonella morbi ATCC 51271]
gi|229786956|gb|EEP23070.1| hypothetical protein GCWU000282_00810 [Catonella morbi ATCC 51271]
Length = 131
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT + ITD +GN I+WSS +GF GS+K++PFAAQ+A++ + A
Sbjct: 17 NVEKGVAHIRSTFNNTIVMITDVNGNAISWSSAGSLGFRGSKKSTPFAAQMASEVAAKGA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+HGM ++EV V G G+GR+SA+R+L+A G + +I DVT I HNGCRP KRRR+
Sbjct: 77 MDHGMKTVEVTVKGPGSGRESAIRSLQATGLEVTAIRDVTPIPHNGCRPPKRRRV 131
>gi|291087196|ref|ZP_06345680.2| 30S ribosomal protein S11 [Clostridium sp. M62/1]
gi|291075941|gb|EFE13305.1| 30S ribosomal protein S11 [Clostridium sp. M62/1]
Length = 133
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/113 (50%), Positives = 83/113 (73%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 21 ERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETATKAALI 80
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 81 HGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPHNGCRPPKRRRV 133
>gi|156310433|ref|XP_001617742.1| hypothetical protein NEMVEDRAFT_v1g156831 [Nematostella vectensis]
gi|156195586|gb|EDO25642.1| predicted protein [Nematostella vectensis]
Length = 125
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/125 (53%), Positives = 89/125 (71%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
R+R + RKNI G AHV ++FNNT ITITD GN ++W+S GF GSRK++PFAAQ
Sbjct: 1 AQRVRKKVRKNISDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSRKSTPFAAQ 60
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
VA++ A G+ +L+V++ G G GR+S++RAL A+G I SI DVT + HNGCRP+
Sbjct: 61 VASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSIADVTPVPHNGCRPQ 120
Query: 125 KRRRI 129
KRRRI
Sbjct: 121 KRRRI 125
>gi|296282606|ref|ZP_06860604.1| 30S ribosomal protein S11 [Citromicrobium bathyomarinum JL354]
Length = 129
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/129 (64%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RIR RERKNI SG AHV ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPGRIRRRERKNISSGVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALRAL+A+GFTI SI DVT I HNG
Sbjct: 61 YAAQVAADDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|304310038|ref|YP_003809636.1| 30S ribosomal protein S11 [gamma proteobacterium HdN1]
gi|301795771|emb|CBL43970.1| 30S ribosomal protein S11 [gamma proteobacterium HdN1]
Length = 131
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/112 (50%), Positives = 79/112 (70%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++FNNT +T+TD GNT++W++ GF GSRK++PFAAQVA + A +
Sbjct: 20 DGVAHINASFNNTIVTLTDRQGNTLSWATAGGSGFRGSRKSTPFAAQVACEKACQLASEY 79
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +++V V G G GR+SA+RAL + G + SI DVT I HNGCRP K+RR+
Sbjct: 80 GLKNVDVMVKGPGPGRESAVRALHSSGIKVNSITDVTPIPHNGCRPPKKRRV 131
>gi|89053107|ref|YP_508558.1| 30S ribosomal protein S11 [Jannaschia sp. CCS1]
gi|123287000|sp|Q28US9|RS11_JANSC RecName: Full=30S ribosomal protein S11
gi|88862656|gb|ABD53533.1| SSU ribosomal protein S11P [Jannaschia sp. CCS1]
Length = 129
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDRRPAKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D KAQ+HG+ +LEV+V G G+GR+SALRAL A+GF I SI DVT +AHNG
Sbjct: 61 FAAQMAAEDAGKKAQDHGVRTLEVEVQGPGSGRESALRALAALGFQISSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|69247194|ref|ZP_00604256.1| Ribosomal protein S11 [Enterococcus faecium DO]
gi|227550744|ref|ZP_03980793.1| ribosomal protein S11 [Enterococcus faecium TX1330]
gi|257878749|ref|ZP_05658402.1| ribosomal protein S11 [Enterococcus faecium 1,230,933]
gi|257881391|ref|ZP_05661044.1| ribosomal protein S11 [Enterococcus faecium 1,231,502]
gi|257885658|ref|ZP_05665311.1| ribosomal protein S11 [Enterococcus faecium 1,231,501]
gi|257887997|ref|ZP_05667650.1| ribosomal protein S11 [Enterococcus faecium 1,141,733]
gi|257890608|ref|ZP_05670261.1| ribosomal protein S11 [Enterococcus faecium 1,231,410]
gi|257893199|ref|ZP_05672852.1| ribosomal protein S11 [Enterococcus faecium 1,231,408]
gi|257896384|ref|ZP_05676037.1| ribosomal protein S11 [Enterococcus faecium Com12]
gi|257899359|ref|ZP_05679012.1| ribosomal protein S11 [Enterococcus faecium Com15]
gi|258615186|ref|ZP_05712956.1| 30S ribosomal protein S11 [Enterococcus faecium DO]
gi|260558312|ref|ZP_05830508.1| ribosomal protein S11 [Enterococcus faecium C68]
gi|261207017|ref|ZP_05921706.1| ribosomal protein S11 [Enterococcus faecium TC 6]
gi|289565348|ref|ZP_06445798.1| 30S ribosomal protein S11 [Enterococcus faecium D344SRF]
gi|293379470|ref|ZP_06625614.1| 30S ribosomal protein S11 [Enterococcus faecium PC4.1]
gi|293553903|ref|ZP_06674509.1| 30S ribosomal protein S11 [Enterococcus faecium E1039]
gi|293562971|ref|ZP_06677438.1| ribosomal protein S11 [Enterococcus faecium E1162]
gi|293567907|ref|ZP_06679248.1| ribosomal protein S11 [Enterococcus faecium E1071]
gi|293570708|ref|ZP_06681758.1| ribosomal protein S11 [Enterococcus faecium E980]
gi|294615369|ref|ZP_06695242.1| ribosomal protein S11 [Enterococcus faecium E1636]
gi|294618295|ref|ZP_06697876.1| ribosomal protein S11 [Enterococcus faecium E1679]
gi|294621103|ref|ZP_06700294.1| ribosomal protein S11 [Enterococcus faecium U0317]
gi|314937633|ref|ZP_07844959.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133a04]
gi|314942868|ref|ZP_07849681.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133C]
gi|314947996|ref|ZP_07851400.1| 30S ribosomal protein S11 [Enterococcus faecium TX0082]
gi|314950913|ref|ZP_07853982.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133A]
gi|314991439|ref|ZP_07856916.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133B]
gi|314995040|ref|ZP_07860160.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133a01]
gi|68194959|gb|EAN09427.1| Ribosomal protein S11 [Enterococcus faecium DO]
gi|227180205|gb|EEI61177.1| ribosomal protein S11 [Enterococcus faecium TX1330]
gi|257812977|gb|EEV41735.1| ribosomal protein S11 [Enterococcus faecium 1,230,933]
gi|257817049|gb|EEV44377.1| ribosomal protein S11 [Enterococcus faecium 1,231,502]
gi|257821514|gb|EEV48644.1| ribosomal protein S11 [Enterococcus faecium 1,231,501]
gi|257824051|gb|EEV50983.1| ribosomal protein S11 [Enterococcus faecium 1,141,733]
gi|257826968|gb|EEV53594.1| ribosomal protein S11 [Enterococcus faecium 1,231,410]
gi|257829578|gb|EEV56185.1| ribosomal protein S11 [Enterococcus faecium 1,231,408]
gi|257832949|gb|EEV59370.1| ribosomal protein S11 [Enterococcus faecium Com12]
gi|257837271|gb|EEV62345.1| ribosomal protein S11 [Enterococcus faecium Com15]
gi|260075486|gb|EEW63792.1| ribosomal protein S11 [Enterococcus faecium C68]
gi|260078645|gb|EEW66347.1| ribosomal protein S11 [Enterococcus faecium TC 6]
gi|289162838|gb|EFD10688.1| 30S ribosomal protein S11 [Enterococcus faecium D344SRF]
gi|291589492|gb|EFF21299.1| ribosomal protein S11 [Enterococcus faecium E1071]
gi|291591743|gb|EFF23379.1| ribosomal protein S11 [Enterococcus faecium E1636]
gi|291595389|gb|EFF26701.1| ribosomal protein S11 [Enterococcus faecium E1679]
gi|291599339|gb|EFF30365.1| ribosomal protein S11 [Enterococcus faecium U0317]
gi|291601955|gb|EFF32201.1| 30S ribosomal protein S11 [Enterococcus faecium E1039]
gi|291605097|gb|EFF34564.1| ribosomal protein S11 [Enterococcus faecium E1162]
gi|291609180|gb|EFF38452.1| ribosomal protein S11 [Enterococcus faecium E980]
gi|292641993|gb|EFF60159.1| 30S ribosomal protein S11 [Enterococcus faecium PC4.1]
gi|313590766|gb|EFR69611.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133a01]
gi|313593919|gb|EFR72764.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133B]
gi|313596922|gb|EFR75767.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133A]
gi|313598340|gb|EFR77185.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133C]
gi|313643010|gb|EFS07590.1| 30S ribosomal protein S11 [Enterococcus faecium TX0133a04]
gi|313645594|gb|EFS10174.1| 30S ribosomal protein S11 [Enterococcus faecium TX0082]
Length = 129
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI +G AH+ STFNNT I ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MAAKKVNRKRRVKKNIEAGIAHIHSTFNNTIIMITDTHGNALAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ ++EV V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETATKAAMEHGLKTVEVTVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 ARPPKRRRV 129
>gi|282898335|ref|ZP_06306326.1| Ribosomal protein S11 [Raphidiopsis brookii D9]
gi|282899974|ref|ZP_06307935.1| Ribosomal protein S11 [Cylindrospermopsis raciborskii CS-505]
gi|281195244|gb|EFA70180.1| Ribosomal protein S11 [Cylindrospermopsis raciborskii CS-505]
gi|281196866|gb|EFA71771.1| Ribosomal protein S11 [Raphidiopsis brookii D9]
Length = 131
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ +++ N+ +G A++ STFNN+ +TITD +G+ I+W+S GF G++K
Sbjct: 1 MARQPTKKTGSKKQKKNVPNGVAYIQSTFNNSIVTITDQNGDVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + +A + GM ++V VSG GAGR++A+RAL+ G I I DVT I H
Sbjct: 61 TPFAAQTAAESAGRRAIDQGMRQIQVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|258648134|ref|ZP_05735603.1| 30S ribosomal protein S11 [Prevotella tannerae ATCC 51259]
gi|260852015|gb|EEX71884.1| 30S ribosomal protein S11 [Prevotella tannerae ATCC 51259]
Length = 129
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVATKKRVVKVDANGQLHVHSSFNNIIVSLTNSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKTAFDLGLRKVKAYVKGPGNGRESAIRAVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|110833281|ref|YP_692140.1| 30S ribosomal protein S11 [Alcanivorax borkumensis SK2]
gi|123345802|sp|Q0VSI0|RS11_ALCBS RecName: Full=30S ribosomal protein S11
gi|110646392|emb|CAL15868.1| 30S ribosomal protein S11 [Alcanivorax borkumensis SK2]
Length = 132
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 1 MPKSPS---RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M KS R + + + G AHV ++FNNT ITITD GN ++W++ GF GSRK
Sbjct: 1 MAKSKKDSGARRKKVTRTVADGIAHVHASFNNTIITITDRQGNALSWATSGGAGFRGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA ++ A+++G+ +LEV+V G G GR+S++RAL G+ I I DVT I
Sbjct: 61 STPFAAQVAAENAGNAAKDYGLKNLEVRVKGPGPGRESSIRALNGCGYKITHIEDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 HNGCRPPKKRRV 132
>gi|255020790|ref|ZP_05292848.1| SSU ribosomal protein S11p (S14e) [Acidithiobacillus caldus ATCC
51756]
gi|254969786|gb|EET27290.1| SSU ribosomal protein S11p (S14e) [Acidithiobacillus caldus ATCC
51756]
Length = 132
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/132 (53%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 1 MPKSPS---RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ S R+R + +KN+V G AH+ ++FNNT ITI+D GN +AW+S GF GSRK
Sbjct: 1 MAKTQSSNLRVRKKIKKNVVDGVAHIYASFNNTIITISDRQGNALAWASSGGSGFRGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA ++ KAQ +G+ +L+V+V G G GR+S +RAL ++GF I SI DVT I
Sbjct: 61 STPFAAQVAAENAGRKAQEYGVKNLDVEVRGPGPGRESTVRALHSVGFRITSIRDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 HNGCRPPKKRRV 132
>gi|167629494|ref|YP_001679993.1| 30S ribosomal protein s11 [Heliobacterium modesticaldum Ice1]
gi|167592234|gb|ABZ83982.1| 30S ribosomal protein s11 [Heliobacterium modesticaldum Ice1]
Length = 131
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ +R + +ERK++ G AH+ STFNNT +TITDP+GNTI+W+S V+GF GSRK++PF
Sbjct: 4 ARRVTRTKRKERKHVDRGVAHIKSTFNNTIVTITDPNGNTISWASAGVLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +A HG+ +E V G G+GR++A+R+L+A G + I DVT I HNGC
Sbjct: 64 AAQMAAESAAKEAMEHGLREVECLVKGPGSGREAAIRSLQAAGLEVNMIKDVTPIPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|291518021|emb|CBK73242.1| SSU ribosomal protein S11P [Butyrivibrio fibrisolvens 16/4]
Length = 130
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+ HV ++FNNT +TITD GN ++W+S +GF GSRK++P+AAQ+A + A
Sbjct: 16 NVEHGQVHVQASFNNTIVTITDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAVKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RA+ A G +++I DVT + HNGCRP KRRR+
Sbjct: 76 LVHGLKSVDVFVKGPGSGREAAIRAIDANGVQVLTIKDVTPVPHNGCRPPKRRRV 130
>gi|89902966|ref|YP_525437.1| 30S ribosomal protein S11 [Rhodoferax ferrireducens T118]
gi|123091014|sp|Q21QP7|RS11_RHOFD RecName: Full=30S ribosomal protein S11
gi|89347703|gb|ABD71906.1| SSU ribosomal protein S11P [Rhodoferax ferrireducens T118]
Length = 134
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P R+R + RKN+ G AHV ++FNNT ITITD GN ++W+S GF GS
Sbjct: 1 MAKAPASNAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA++ A G+ +L+V++ G G GR+S++RAL A+G I I DVT
Sbjct: 61 RKSTPFAAQVASEVAGRAAIEQGVKNLDVEIKGPGPGRESSVRALAALGIRINMIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP+KRRRI
Sbjct: 121 VPHNGCRPQKRRRI 134
>gi|87200541|ref|YP_497798.1| 30S ribosomal protein S11 [Novosphingobium aromaticivorans DSM
12444]
gi|123763417|sp|Q2G5A9|RS11_NOVAD RecName: Full=30S ribosomal protein S11
gi|87136222|gb|ABD26964.1| SSU ribosomal protein S11P [Novosphingobium aromaticivorans DSM
12444]
Length = 129
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RI+ RERKNI SG AHV ++FNNT +TITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPQRIKRRERKNITSGIAHVNASFNNTMVTITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALRAL+A+GFTI +I DVT I HNG
Sbjct: 61 YAAQVAADDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFTITAIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|323483274|ref|ZP_08088664.1| ribosomal protein S11 [Clostridium symbiosum WAL-14163]
gi|323691227|ref|ZP_08105503.1| ribosomal protein S11 [Clostridium symbiosum WAL-14673]
gi|323403372|gb|EGA95680.1| ribosomal protein S11 [Clostridium symbiosum WAL-14163]
gi|323504746|gb|EGB20532.1| ribosomal protein S11 [Clostridium symbiosum WAL-14673]
Length = 133
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/133 (47%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
Query: 1 MPKSPSR----IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K S + R +KN+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSR
Sbjct: 1 MAKKMSTGKKVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + A HG+ S++V V G G+GR++A+RAL+A G + SI DVT +
Sbjct: 61 KSTPYAAQMAAETATKAALIHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIKDVTPV 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 PHNGCRPPKRRRV 133
>gi|313897174|ref|ZP_07830718.1| ribosomal protein S11 [Clostridium sp. HGF2]
gi|312957895|gb|EFR39519.1| ribosomal protein S11 [Clostridium sp. HGF2]
Length = 132
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/126 (53%), Positives = 85/126 (67%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ SR + + RKNI G AHV STFNNT +TITD +GN +AWSS +GF GSRK++PFA
Sbjct: 6 KANSRGKRKARKNIARGVAHVHSTFNNTIVTITDENGNAVAWSSAGALGFKGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + A +GM + V V G G GR++A+RAL+ G I I DVT I HNGCR
Sbjct: 66 AQMAGEAAGKAAIENGMKVIAVSVKGPGPGREAAVRALQVAGLEITLINDVTPIPHNGCR 125
Query: 123 PRKRRR 128
P KR R
Sbjct: 126 PPKRPR 131
>gi|94266330|ref|ZP_01290032.1| Ribosomal protein S11 [delta proteobacterium MLMS-1]
gi|93453084|gb|EAT03563.1| Ribosomal protein S11 [delta proteobacterium MLMS-1]
Length = 131
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K R R ++RKNI G + STFNNT +T DP GN I+W S +GF GSRK+
Sbjct: 1 MAKPSKTVRPRKKDRKNIPEGVCFIKSTFNNTIVTFADPAGNVISWCSSGCLGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + KAQ+HG+ +EV+V+G G GR+SA+RAL+A G + I D+T + H
Sbjct: 61 TPFAAQNAVETAVKKAQDHGLRKVEVRVNGPGPGRESAIRALQAAGVEVNFIRDMTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGC+P KRRR+
Sbjct: 121 NGCKPPKRRRV 131
>gi|326387080|ref|ZP_08208690.1| 30S ribosomal protein S11 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208261|gb|EGD59068.1| 30S ribosomal protein S11 [Novosphingobium nitrogenifigens DSM
19370]
Length = 129
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 81/129 (62%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P RI+ RERKNI SG AHV ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPQRIKRRERKNITSGVAHVNASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALRAL+A+GFTI +I DVT I HNG
Sbjct: 61 YAAQVAADDAGKKAAEHGVRTLEVEVKGPGSGRESALRALQAVGFTITAIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|325104843|ref|YP_004274497.1| SSU ribosomal protein S11P [Pedobacter saltans DSM 12145]
gi|324973691|gb|ADY52675.1| SSU ribosomal protein S11P [Pedobacter saltans DSM 12145]
Length = 129
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R G+AH+ +TFNN IT+T+ G TI+WSS GF GS+KN+P
Sbjct: 1 MAKSKKVTKKRIVVIEPVGQAHINATFNNIIITLTNNQGQTISWSSAGKQGFKGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA A DC A + G+ +EV V G G+GR+SA+R L+ G + +I D+T + HNG
Sbjct: 61 YAASQAASDCGKVAYDLGLRKVEVFVKGPGSGRESAIRTLQNAGIEVTTIKDITPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|171914055|ref|ZP_02929525.1| 30S ribosomal protein S11 [Verrucomicrobium spinosum DSM 4136]
Length = 190
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/128 (46%), Positives = 88/128 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P++P I+ + KN+ SG HV +TFNNT++++TD +GN I WSS +GF GSRK + +
Sbjct: 63 PEAPKIIKAKGSKNVSSGIVHVTATFNNTQVSVTDRNGNLIGWSSSGKMGFKGSRKGTAY 122
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
A QV + D +A HG+ +EV++ G G+GR+SA+RA++A+ I I DVT + HNGC
Sbjct: 123 AGQVVSQDACRQAMGHGLREVEVRLKGPGSGRESAVRAVQALNIEITVIKDVTPVPHNGC 182
Query: 122 RPRKRRRI 129
RP K RR+
Sbjct: 183 RPPKARRV 190
>gi|310816987|ref|YP_003964951.1| 30S ribosomal protein S11 [Ketogulonicigenium vulgare Y25]
gi|308755722|gb|ADO43651.1| 30S ribosomal protein S11 [Ketogulonicigenium vulgare Y25]
Length = 130
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/130 (59%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R + + KNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++
Sbjct: 1 MARDTRRGGKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAIAWSSSGTMGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL AIGF I SI DVT IAHN
Sbjct: 61 PYAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGRESALRALAAIGFNITSIRDVTPIAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|30468202|ref|NP_849089.1| ribosomal protein S11 [Cyanidioschyzon merolae strain 10D]
gi|62287466|sp|Q85FU4|RR11_CYAME RecName: Full=30S ribosomal protein S11, chloroplastic
gi|30409302|dbj|BAC76251.1| 30S ribosomal protein S11 [Cyanidioschyzon merolae strain 10D]
Length = 121
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/120 (48%), Positives = 80/120 (66%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ ++ G H+ STFNNT IT++D G + WSS +VGF G++K +PFAA +A +
Sbjct: 2 KKSKRTDRKGSIHIQSTFNNTLITVSDAQGACVCWSSAGLVGFKGAKKGTPFAAGMAAEK 61
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ A++ GM ++V V G GAGR++A+RAL A G I SI DVT I HNGCRP KRRR+
Sbjct: 62 VAQLAKDQGMKQVDVFVKGPGAGRETAIRALEAAGLQITSIQDVTGIPHNGCRPPKRRRV 121
>gi|90020629|ref|YP_526456.1| 30S ribosomal protein S11 [Saccharophagus degradans 2-40]
gi|123277584|sp|Q21M35|RS11_SACD2 RecName: Full=30S ribosomal protein S11
gi|89950229|gb|ABD80244.1| SSU ribosomal protein S11P / histidine kinase [Saccharophagus
degradans 2-40]
Length = 131
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + + + +K +V G AH+ ++FNNT +TITD GNT++W++ GF GSRK+
Sbjct: 1 MAKPSGKSTTKKKVKKTVVDGIAHIHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ++G+ +L+V+V G G GR+SA+RAL IG+ + +I DVT I H
Sbjct: 61 TPFAAQVAAERAGQAAQDYGLKNLDVEVKGPGPGRESAVRALNNIGYKVNNITDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|51894184|ref|YP_076875.1| 30S ribosomal protein S11 [Symbiobacterium thermophilum IAM 14863]
gi|59798668|sp|Q67JW9|RS11_SYMTH RecName: Full=30S ribosomal protein S11
gi|51857873|dbj|BAD42031.1| Ribosomal protein S11 [Symbiobacterium thermophilum IAM 14863]
Length = 129
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R++ RERKN+ G AH+ STFNNT +TITD HGN +AW++ +GF GSRK++P
Sbjct: 1 MAKRTARVKRRERKNVDKGVAHIRSTFNNTIVTITDVHGNALAWATAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +EV V G G+GR++A+R L+A G + +I DVT I HNG
Sbjct: 61 FAAQMAAEKAAKDAMEHGVREVEVLVKGPGSGREAAIRQLQAAGLEVTAIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|24371852|ref|NP_715894.1| 30S ribosomal protein S11 [Shewanella oneidensis MR-1]
gi|113968567|ref|YP_732360.1| 30S ribosomal protein S11 [Shewanella sp. MR-4]
gi|114045730|ref|YP_736280.1| 30S ribosomal protein S11 [Shewanella sp. MR-7]
gi|117918680|ref|YP_867872.1| 30S ribosomal protein S11 [Shewanella sp. ANA-3]
gi|120597012|ref|YP_961586.1| 30S ribosomal protein S11 [Shewanella sp. W3-18-1]
gi|126176332|ref|YP_001052481.1| 30S ribosomal protein S11 [Shewanella baltica OS155]
gi|146294818|ref|YP_001185242.1| 30S ribosomal protein S11 [Shewanella putrefaciens CN-32]
gi|152998772|ref|YP_001364453.1| 30S ribosomal protein S11 [Shewanella baltica OS185]
gi|160873348|ref|YP_001552664.1| 30S ribosomal protein S11 [Shewanella baltica OS195]
gi|217975178|ref|YP_002359929.1| 30S ribosomal protein S11 [Shewanella baltica OS223]
gi|304412787|ref|ZP_07394389.1| 30S ribosomal protein S11 [Shewanella baltica OS183]
gi|307307451|ref|ZP_07587186.1| 30S ribosomal protein S11 [Shewanella baltica BA175]
gi|48474282|sp|P59375|RS11_SHEON RecName: Full=30S ribosomal protein S11
gi|122944218|sp|Q0HNR4|RS11_SHESM RecName: Full=30S ribosomal protein S11
gi|122945055|sp|Q0I082|RS11_SHESR RecName: Full=30S ribosomal protein S11
gi|152060821|sp|A0KRP7|RS11_SHESA RecName: Full=30S ribosomal protein S11
gi|152060822|sp|A1RED7|RS11_SHESW RecName: Full=30S ribosomal protein S11
gi|166231832|sp|A3DA49|RS11_SHEB5 RecName: Full=30S ribosomal protein S11
gi|166231833|sp|A6WHV1|RS11_SHEB8 RecName: Full=30S ribosomal protein S11
gi|166231834|sp|A4YBW0|RS11_SHEPC RecName: Full=30S ribosomal protein S11
gi|189040435|sp|A9KWC4|RS11_SHEB9 RecName: Full=30S ribosomal protein S11
gi|254811042|sp|B8EBI2|RS11_SHEB2 RecName: Full=30S ribosomal protein S11
gi|24345669|gb|AAN53339.1|AE015474_2 ribosomal protein S11 [Shewanella oneidensis MR-1]
gi|110812359|gb|ABG91715.1| ribosomal protein S11 [Shewanella putrefaciens 200]
gi|113883251|gb|ABI37303.1| SSU ribosomal protein S11P [Shewanella sp. MR-4]
gi|113887172|gb|ABI41223.1| SSU ribosomal protein S11P [Shewanella sp. MR-7]
gi|117611012|gb|ABK46466.1| SSU ribosomal protein S11P [Shewanella sp. ANA-3]
gi|120557105|gb|ABM23032.1| SSU ribosomal protein S11P [Shewanella sp. W3-18-1]
gi|125999537|gb|ABN63612.1| SSU ribosomal protein S11P [Shewanella baltica OS155]
gi|145566508|gb|ABP77443.1| SSU ribosomal protein S11P [Shewanella putrefaciens CN-32]
gi|151363390|gb|ABS06390.1| ribosomal protein S11 [Shewanella baltica OS185]
gi|160858870|gb|ABX47404.1| ribosomal protein S11 [Shewanella baltica OS195]
gi|217500313|gb|ACK48506.1| ribosomal protein S11 [Shewanella baltica OS223]
gi|304348867|gb|EFM13283.1| 30S ribosomal protein S11 [Shewanella baltica OS183]
gi|306910239|gb|EFN40672.1| 30S ribosomal protein S11 [Shewanella baltica BA175]
gi|315265576|gb|ADT92429.1| 30S ribosomal protein S11 [Shewanella baltica OS678]
gi|319424603|gb|ADV52677.1| 30S ribosomal protein S11 [Shewanella putrefaciens 200]
Length = 130
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K PSR R R RK + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKVPSRSPRKRVRKQVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A AQ++G+ +LEV V G G GR+SA+RAL A+G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGAAAQDYGLKNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|325288603|ref|YP_004264784.1| SSU ribosomal protein S11P [Syntrophobotulus glycolicus DSM 8271]
gi|324964004|gb|ADY54783.1| SSU ribosomal protein S11P [Syntrophobotulus glycolicus DSM 8271]
Length = 129
Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R R RERKN+ SG AH+ STFNNT +TI+D GN I+WSS +GF GSRK++P
Sbjct: 1 MAKKVVRTRRRERKNVESGIAHIKSTFNNTIVTISDNGGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HGM ++E V G G+GR++A+RAL+A G + I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGMKNVECFVKGPGSGREAAIRALQAAGLEVNLIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|224542264|ref|ZP_03682803.1| hypothetical protein CATMIT_01439 [Catenibacterium mitsuokai DSM
15897]
gi|224524806|gb|EEF93911.1| hypothetical protein CATMIT_01439 [Catenibacterium mitsuokai DSM
15897]
Length = 129
Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 88/128 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R + R +KNI G AHV STFNNT +T+ D HGN I+WSS +GF GSRK++P
Sbjct: 1 MAKQVVRGKKRVKKNIAKGIAHVHSTFNNTIVTVADEHGNVISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + + + +HGM S+EV V G G GR++A+RAL A G + +I DVT I HNG
Sbjct: 61 YAAQMAAEAAAKASMDHGMKSVEVCVKGPGPGREAAVRALSAAGLEVTAITDVTPIPHNG 120
Query: 121 CRPRKRRR 128
CRP KR R
Sbjct: 121 CRPPKRPR 128
>gi|331004907|ref|ZP_08328323.1| SSU ribosomal protein S11p (S14e) [gamma proteobacterium IMCC1989]
gi|330421294|gb|EGG95544.1| SSU ribosomal protein S11p (S14e) [gamma proteobacterium IMCC1989]
Length = 127
Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ + ++ +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPSTKKKVKK--TVVDGIAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A +G+ +L+V+V G G GR+SA+RAL +G+ I +I DVT I HNG
Sbjct: 59 FAAQVAAERAGQAALEYGLKNLDVEVKGPGPGRESAVRALNNVGYKIANITDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|77165765|ref|YP_344290.1| 30S ribosomal protein S11 [Nitrosococcus oceani ATCC 19707]
gi|91207662|sp|Q3J8T6|RS11_NITOC RecName: Full=30S ribosomal protein S11
gi|76884079|gb|ABA58760.1| SSU ribosomal protein S11P [Nitrosococcus oceani ATCC 19707]
Length = 127
Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R ++ + G AH+ ++FNNT +TITD GNT+AW++ GF GSRK++P
Sbjct: 1 MAKTS--TKKRVKRVVSDGIAHIHASFNNTIVTITDRQGNTLAWATSGGSGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + Q GM +LEV+V G G GR+SA R+L +GF + +I D+T I HNG
Sbjct: 59 FAAQVAAEKAGRIVQEMGMKNLEVRVKGPGPGRESAARSLNNVGFKVTNIADITPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|163851601|ref|YP_001639644.1| ribosomal protein S11 [Methylobacterium extorquens PA1]
gi|218530410|ref|YP_002421226.1| 30S ribosomal protein S11 [Methylobacterium chloromethanicum CM4]
gi|240138769|ref|YP_002963241.1| 30S ribosomal subunit protein S11 [Methylobacterium extorquens AM1]
gi|254561369|ref|YP_003068464.1| 30S ribosomal subunit protein S11 [Methylobacterium extorquens DM4]
gi|226708384|sp|A9W4R7|RS11_METEP RecName: Full=30S ribosomal protein S11
gi|254811031|sp|B7L0S7|RS11_METC4 RecName: Full=30S ribosomal protein S11
gi|163663206|gb|ABY30573.1| ribosomal protein S11 [Methylobacterium extorquens PA1]
gi|218522713|gb|ACK83298.1| ribosomal protein S11 [Methylobacterium chloromethanicum CM4]
gi|240008738|gb|ACS39964.1| 30S ribosomal subunit protein S11 [Methylobacterium extorquens AM1]
gi|254268647|emb|CAX24606.1| 30S ribosomal subunit protein S11 [Methylobacterium extorquens DM4]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+R+R RERKNIVSG AHV ++FNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKEPTRVRRRERKNIVSGVAHVAASFNNTMITITDAQGNTISWSSAGAMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA HGM +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDAARKASEHGMRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTSIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|90417744|ref|ZP_01225656.1| ribosomal protein S11 [Aurantimonas manganoxydans SI85-9A1]
gi|90337416|gb|EAS51067.1| ribosomal protein S11 [Aurantimonas manganoxydans SI85-9A1]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R+R RERKNI SG AHV STFNNT ITITD GN+IAWSS GF GSRK++P
Sbjct: 1 MAKEAQRVRRRERKNITSGVAHVSSTFNNTLITITDAQGNSIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +D + KAQ HGM +LEV+V G G+GR+SALRAL+A GFTI SI DVT I HNG
Sbjct: 61 FAAQVAAEDAAKKAQEHGMKTLEVEVRGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RPRK+RR+
Sbjct: 121 VRPRKKRRV 129
>gi|91977629|ref|YP_570288.1| 30S ribosomal protein S11 [Rhodopseudomonas palustris BisB5]
gi|123735293|sp|Q134V2|RS11_RHOPS RecName: Full=30S ribosomal protein S11
gi|91684085|gb|ABE40387.1| SSU ribosomal protein S11P [Rhodopseudomonas palustris BisB5]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/129 (67%), Positives = 103/129 (79%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +RIR RERKNI SG AHV S+FNNT ITITD GN IAWSS +GF GSRK++P
Sbjct: 1 MGKETTRIRRRERKNIASGIAHVNSSFNNTTITITDAQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KAQ HGM +LEV+V+G G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQVAAEDVAKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|255530539|ref|YP_003090911.1| 30S ribosomal protein S11 [Pedobacter heparinus DSM 2366]
gi|255343523|gb|ACU02849.1| ribosomal protein S11 [Pedobacter heparinus DSM 2366]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R G+AH+ +TFNN +T+T+ +G TI+WSS +GF GS+KN+P
Sbjct: 1 MAKSKKVTKKRIVVIEPVGQAHINATFNNIIVTLTNNNGQTISWSSAGKMGFKGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA A DC A + G+ ++V V G G+GR+SA+R L+ G + SI D+T + HNG
Sbjct: 61 YAAGQAASDCGKVAFDLGLRKVDVFVKGPGSGRESAIRTLQVSGIEVTSIKDITPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|238018649|ref|ZP_04599075.1| hypothetical protein VEIDISOL_00484 [Veillonella dispar ATCC 17748]
gi|269798524|ref|YP_003312424.1| ribosomal protein S11 [Veillonella parvula DSM 2008]
gi|282849890|ref|ZP_06259273.1| 30S ribosomal protein S11 [Veillonella parvula ATCC 17745]
gi|294792820|ref|ZP_06757967.1| 30S ribosomal protein S11 [Veillonella sp. 6_1_27]
gi|294794574|ref|ZP_06759710.1| 30S ribosomal protein S11 [Veillonella sp. 3_1_44]
gi|303230132|ref|ZP_07316901.1| 30S ribosomal protein S11 [Veillonella atypica ACS-134-V-Col7a]
gi|303231253|ref|ZP_07317991.1| 30S ribosomal protein S11 [Veillonella atypica ACS-049-V-Sch6]
gi|313893001|ref|ZP_07826578.1| 30S ribosomal protein S11 [Veillonella sp. oral taxon 158 str.
F0412]
gi|237865120|gb|EEP66410.1| hypothetical protein VEIDISOL_00484 [Veillonella dispar ATCC 17748]
gi|269095153|gb|ACZ25144.1| ribosomal protein S11 [Veillonella parvula DSM 2008]
gi|282580327|gb|EFB85727.1| 30S ribosomal protein S11 [Veillonella parvula ATCC 17745]
gi|294454904|gb|EFG23277.1| 30S ribosomal protein S11 [Veillonella sp. 3_1_44]
gi|294456719|gb|EFG25082.1| 30S ribosomal protein S11 [Veillonella sp. 6_1_27]
gi|302514160|gb|EFL56164.1| 30S ribosomal protein S11 [Veillonella atypica ACS-049-V-Sch6]
gi|302515193|gb|EFL57166.1| 30S ribosomal protein S11 [Veillonella atypica ACS-134-V-Col7a]
gi|313442354|gb|EFR60769.1| 30S ribosomal protein S11 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R + +E+K+I SG AH+ STFNNT +T+TD +GN ++W+S +GF GSRK++P
Sbjct: 1 MAKKVVRTKRKEKKHIESGAAHIRSTFNNTIVTLTDTNGNALSWASAGGLGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ ++EV V G G+GR++A+RAL+A G + SI DVT I HNG
Sbjct: 61 FAAQMAAEQAAKAAMEHGLRTVEVFVKGPGSGREAAIRALQAAGLEVTSIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|326799153|ref|YP_004316972.1| 30S ribosomal protein S11 [Sphingobacterium sp. 21]
gi|326549917|gb|ADZ78302.1| 30S ribosomal protein S11 [Sphingobacterium sp. 21]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R G+AH+ +TFNN +T+T+ G TI+WSS +GF GS+KN+P
Sbjct: 1 MAKSKKVTKKRIVVIEPVGQAHINATFNNIIVTLTNNQGQTISWSSAGKMGFKGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA A DC A + G+ +EV V G GAGR+SA+R L+ G + SI D+T + HNG
Sbjct: 61 YAASQAASDCGKVAHDLGLRKVEVFVKGPGAGRESAIRTLQTQGIEVTSIKDITPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|85709030|ref|ZP_01040096.1| 30S ribosomal protein S11 [Erythrobacter sp. NAP1]
gi|85690564|gb|EAQ30567.1| 30S ribosomal protein S11 [Erythrobacter sp. NAP1]
Length = 129
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P ++R R+RKNI SG AH+ ++FNNT ITITD GN I+WSS ++GF GSRK++P
Sbjct: 1 MAREPGKVRRRDRKNITSGVAHINASFNNTMITITDAQGNAISWSSAGMMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA DD KA HG+ +LEV+V G G+GR+SALR L A+GF I SI DVT I HNG
Sbjct: 61 YAAQVAADDAGKKAAEHGVRTLEVEVKGPGSGRESALRGLAAVGFNITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 VRPSKRRRV 129
>gi|309777157|ref|ZP_07672120.1| 30S ribosomal protein S11 [Erysipelotrichaceae bacterium 3_1_53]
gi|308915027|gb|EFP60804.1| 30S ribosomal protein S11 [Erysipelotrichaceae bacterium 3_1_53]
Length = 132
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 1 MPKSPS---RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ R + + RKNI G AHV STFNNT +TITD +GN +AWSS +GF GSRK
Sbjct: 1 MAKNVKAGARGKRKARKNIARGVAHVHSTFNNTIVTITDENGNAVAWSSAGALGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + A +GM + V V G G GR++A+RAL+ G I I DVT I
Sbjct: 61 STPFAAQMAGEAAGKAAIENGMKVIAVSVKGPGPGREAAVRALQVAGLEITLINDVTPIP 120
Query: 118 HNGCRPRKRRR 128
HNGCRP KR R
Sbjct: 121 HNGCRPPKRPR 131
>gi|254501716|ref|ZP_05113867.1| ribosomal protein S11 [Labrenzia alexandrii DFL-11]
gi|222437787|gb|EEE44466.1| ribosomal protein S11 [Labrenzia alexandrii DFL-11]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 86/129 (66%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GNTI+WSS +GF GSRK++P
Sbjct: 1 MAKDTTRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNTISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA HGM +LEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAAKKAAEHGMRTLEVEVRGPGSGRESALRALQAAGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|90416839|ref|ZP_01224768.1| ribosomal protein S11 [marine gamma proteobacterium HTCC2207]
gi|90331186|gb|EAS46430.1| ribosomal protein S11 [marine gamma proteobacterium HTCC2207]
Length = 130
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNI-VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS ++ ++ K + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKSATKTTRKKVKKTVIDGVAHIYASFNNTIVTITDRQGNALSWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A+++G+ +L+V+V G G GR+SA+RAL G+ I +I DVT + HN
Sbjct: 61 PFAAQVAAERAGEAAKDYGLKNLDVQVKGPGPGRESAVRALNNAGYKITNITDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|78045178|ref|YP_361092.1| 30S ribosomal protein S11 [Carboxydothermus hydrogenoformans
Z-2901]
gi|91207735|sp|Q3A9U2|RS11_CARHZ RecName: Full=30S ribosomal protein S11
gi|77997293|gb|ABB16192.1| ribosomal protein S11 [Carboxydothermus hydrogenoformans Z-2901]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ R +E+K++ G AH+ STFNNT +TITDP GNT++W+S VGF G+RK +P
Sbjct: 1 MMARRTKARKKEKKHVEQGVAHIKSTFNNTIVTITDPQGNTLSWASAGTVGFEGTRKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A G+ ++EV V G GAGR++A+R+L+A G + I DVT I HNG
Sbjct: 61 FAAQLAAEKAAKEAMEFGVKTVEVYVKGPGAGREAAIRSLQAAGLEVSLIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|307946310|ref|ZP_07661645.1| 30S ribosomal protein S11 [Roseibium sp. TrichSKD4]
gi|307769974|gb|EFO29200.1| 30S ribosomal protein S11 [Roseibium sp. TrichSKD4]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 101/129 (78%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKDTTRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA +HGM +LEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAAKKAADHGMRTLEVEVRGPGSGRESALRALQAAGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|118591157|ref|ZP_01548556.1| 30S ribosomal protein S11 [Stappia aggregata IAM 12614]
gi|118436233|gb|EAV42875.1| 30S ribosomal protein S11 [Stappia aggregata IAM 12614]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNI SG AHV STFNNT ITITD GN I+WSS +GF GSRK++P
Sbjct: 1 MAKDTTRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +D + KA HGM +LEV+V G G+GR+SALRAL+A GF I SI DVT I HNG
Sbjct: 61 YAAQVAAEDAAKKAAEHGMRTLEVEVRGPGSGRESALRALQAAGFLITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|241889149|ref|ZP_04776453.1| 30S ribosomal protein S11 [Gemella haemolysans ATCC 10379]
gi|329768298|ref|ZP_08259799.1| 30S ribosomal protein S11 [Gemella haemolysans M341]
gi|241864398|gb|EER68776.1| 30S ribosomal protein S11 [Gemella haemolysans ATCC 10379]
gi|328837497|gb|EGF87126.1| 30S ribosomal protein S11 [Gemella haemolysans M341]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNN+ +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQSRKRRVKKNIQNGVAHIRSTFNNSIVTITDEHGNAVSWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++V V G GAGR++A+RAL++ G + SI DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMKYVDVTVKGPGAGREAAIRALQSAGLEVTSIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|329770015|ref|ZP_08261410.1| 30S ribosomal protein S11 [Gemella sanguinis M325]
gi|328837326|gb|EGF86956.1| 30S ribosomal protein S11 [Gemella sanguinis M325]
Length = 129
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNN+ +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQSRKRRVKKNIQNGIAHIRSTFNNSIVTITDEHGNAVSWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++V V G GAGR++A+RAL++ G + SI DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMKYVDVTVKGPGAGREAAIRALQSAGLEVTSIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|289579116|ref|YP_003477743.1| 30S ribosomal protein S11 [Thermoanaerobacter italicus Ab9]
gi|297545303|ref|YP_003677605.1| 30S ribosomal protein S11 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528829|gb|ADD03181.1| 30S ribosomal protein S11 [Thermoanaerobacter italicus Ab9]
gi|296843078|gb|ADH61594.1| 30S ribosomal protein S11 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 130
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R R RE+K++ G AH+ STFNNT +TITDP GNTI+W+S +GF GSRK++
Sbjct: 1 MAKRVKRTGRKREKKHVERGIAHIHSTFNNTIVTITDPAGNTISWASAGTIGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HGM +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PFAAQMAAESAAKSAMEHGMKTVDVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|169823877|ref|YP_001691488.1| 30S ribosomal protein S11 [Finegoldia magna ATCC 29328]
gi|297588217|ref|ZP_06946861.1| 30S ribosomal protein S11 [Finegoldia magna ATCC 53516]
gi|302379830|ref|ZP_07268314.1| 30S ribosomal protein S11 [Finegoldia magna ACS-171-V-Col3]
gi|303234767|ref|ZP_07321393.1| 30S ribosomal protein S11 [Finegoldia magna BVS033A4]
gi|167830682|dbj|BAG07598.1| 30S ribosomal protein S11 [Finegoldia magna ATCC 29328]
gi|297574906|gb|EFH93626.1| 30S ribosomal protein S11 [Finegoldia magna ATCC 53516]
gi|302312418|gb|EFK94415.1| 30S ribosomal protein S11 [Finegoldia magna ACS-171-V-Col3]
gi|302494108|gb|EFL53888.1| 30S ribosomal protein S11 [Finegoldia magna BVS033A4]
Length = 135
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K R + R +KNI G+AH+ STFNNT + +TD +GN ++W+S +GF GSRK++P+
Sbjct: 8 AKRNVRGKKRVKKNIEKGQAHISSTFNNTMVCLTDLNGNVLSWASAGQLGFRGSRKSTPY 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A ++ + KA HG+ ++EV V G G+GR+SA+R+L+A G + SI DVT I HNGC
Sbjct: 68 AAQQAAEEAAKKAMEHGLKTVEVYVKGPGSGRESAIRSLQASGLEVSSIKDVTPIPHNGC 127
Query: 122 RPRKRRRI 129
RP K+RR+
Sbjct: 128 RPPKKRRV 135
>gi|206895879|ref|YP_002247309.1| ribosomal protein S11 [Coprothermobacter proteolyticus DSM 5265]
gi|226708351|sp|B5Y962|RS11_COPPD RecName: Full=30S ribosomal protein S11
gi|206738496|gb|ACI17574.1| ribosomal protein S11 [Coprothermobacter proteolyticus DSM 5265]
Length = 125
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 6/130 (4%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +ER+ + G AH+ STFNNT ITITDP+G +AW+S F G+RK +P
Sbjct: 1 MAQK----KRKERRYVPYGVAHIHSTFNNTIITITDPNGAVLAWASGGFF-FKGTRKGTP 55
Query: 61 FAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ+A++ + K Q +GM ++V V G G GR++A+RAL+A+G + SI DVT I HN
Sbjct: 56 YAAQLASESVAKKVQQTYGMKEIDVFVKGPGPGRETAIRALQAVGLDVKSIKDVTPIPHN 115
Query: 120 GCRPRKRRRI 129
GCRP K RR+
Sbjct: 116 GCRPPKARRV 125
>gi|300114713|ref|YP_003761288.1| 30S ribosomal protein S11 [Nitrosococcus watsonii C-113]
gi|299540650|gb|ADJ28967.1| 30S ribosomal protein S11 [Nitrosococcus watsonii C-113]
Length = 127
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R ++ + G AH+ ++FNNT +TITD GNT+AW++ GF GSRK++P
Sbjct: 1 MAKAS--TKKRVKRVVADGIAHIHASFNNTIVTITDRQGNTLAWATSGGSGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + Q GM +LEV+V G G GR+SA R+L GF + +I D+T I HNG
Sbjct: 59 FAAQVAAEKAGRIVQEMGMKNLEVRVKGPGPGRESAARSLNNAGFKVTNIADITPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|304384300|ref|ZP_07366711.1| 30S ribosomal protein S11 [Prevotella marshii DSM 16973]
gi|304334616|gb|EFM00898.1| 30S ribosomal protein S11 [Prevotella marshii DSM 16973]
Length = 129
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKQATSKKRNVRVDAIGQLHVHSSFNNIIVSLANNEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ + G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHSSGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|195952669|ref|YP_002120959.1| 30S ribosomal protein S11 [Hydrogenobaculum sp. Y04AAS1]
gi|195932281|gb|ACG56981.1| ribosomal protein S11 [Hydrogenobaculum sp. Y04AAS1]
Length = 130
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ +E++N+ SG H+ STFNNT IT+TD GNT+AW S GF G+RK +P
Sbjct: 1 MAKKRTKEAKKEKRNVSSGIVHIYSTFNNTIITVTDSLGNTLAWESGGTTGFKGTRKGTP 60
Query: 61 FAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQVA KA +G+ EV V G GAGR+SA+R+++A G I +I DVT I HN
Sbjct: 61 YAAQVAAQKAIKKAVNEYGLQEAEVWVKGPGAGRESAIRSIQAAGVKIKAIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP RRR+
Sbjct: 121 GCRPTSRRRV 130
>gi|114767225|ref|ZP_01446090.1| 30S ribosomal protein S11 [Pelagibaca bermudensis HTCC2601]
gi|114540635|gb|EAU43706.1| 30S ribosomal protein S11 [Roseovarius sp. HTCC2601]
Length = 130
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 74/130 (56%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++
Sbjct: 1 MARDTRRGGKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A +D KAQ HG+ +LEV+V G G+GR+SALRAL A GF I SI DV+ IAHN
Sbjct: 61 PYAAQLAAEDAGKKAQEHGVKTLEVEVQGPGSGRESALRALAAAGFNITSIRDVSPIAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|149279639|ref|ZP_01885768.1| 30S ribosomal protein S11 [Pedobacter sp. BAL39]
gi|149229675|gb|EDM35065.1| 30S ribosomal protein S11 [Pedobacter sp. BAL39]
Length = 129
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R G+AH+ +TFNN +T+T+ +G TI+WSS +GF GS+KN+P
Sbjct: 1 MAKSKKVTKKRIVVIESVGQAHINATFNNIIVTLTNNNGQTISWSSAGKMGFKGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA A DC A + G+ +EV V G G+GR+SA+R L+ G + SI D+T + HNG
Sbjct: 61 YAAGQAASDCGKVAFDLGLRKVEVFVKGPGSGRESAIRTLQVSGIEVTSIKDITPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|323136110|ref|ZP_08071193.1| 30S ribosomal protein S11 [Methylocystis sp. ATCC 49242]
gi|322399201|gb|EFY01720.1| 30S ribosomal protein S11 [Methylocystis sp. ATCC 49242]
Length = 129
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNIVSG AHV STFNNT ITITD GNT++WSS +GF GSRK++P
Sbjct: 1 MAKDTTRVRRRERKNIVSGVAHVNSTFNNTMITITDAQGNTVSWSSAGSMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KA HG+ +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQMAAEDAARKAGEHGVRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|242624286|ref|YP_003002204.1| 30S ribosomal protein S11 [Aureoumbra lagunensis]
gi|239997394|gb|ACS36916.1| 30S ribosomal protein S11 [Aureoumbra lagunensis]
Length = 130
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +++KNI G H+ STFNNT ITITD GNTI+WSS VGF G+RK +
Sbjct: 1 MAVKTKRSGTKKQKKNIPFGVVHINSTFNNTIITITDASGNTISWSSAGSVGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + S A G+ ++V + G G+GR++++RAL A+G +VSI D+T I HN
Sbjct: 61 PFAAQTAAEKASLTAMEQGLKRVDVVIKGQGSGRETSVRALEAVGLDVVSIKDITSIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|146297259|ref|YP_001181030.1| 30S ribosomal protein S11 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|222529704|ref|YP_002573586.1| 30S ribosomal protein S11 [Caldicellulosiruptor bescii DSM 6725]
gi|302871524|ref|YP_003840160.1| 30S ribosomal protein S11 [Caldicellulosiruptor obsidiansis OB47]
gi|312127252|ref|YP_003992126.1| 30S ribosomal protein s11 [Caldicellulosiruptor hydrothermalis 108]
gi|312135470|ref|YP_004002808.1| 30S ribosomal protein s11 [Caldicellulosiruptor owensensis OL]
gi|312622071|ref|YP_004023684.1| 30S ribosomal protein s11 [Caldicellulosiruptor kronotskyensis
2002]
gi|312793913|ref|YP_004026836.1| 30S ribosomal protein s11 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877391|ref|ZP_07737356.1| 30S ribosomal protein S11 [Caldicellulosiruptor lactoaceticus 6A]
gi|172046029|sp|A4XLQ4|RS11_CALS8 RecName: Full=30S ribosomal protein S11
gi|254765361|sp|B9MKF5|RS11_ANATD RecName: Full=30S ribosomal protein S11
gi|145410835|gb|ABP67839.1| SSU ribosomal protein S11P [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|222456551|gb|ACM60813.1| ribosomal protein S11 [Caldicellulosiruptor bescii DSM 6725]
gi|302574383|gb|ADL42174.1| 30S ribosomal protein S11 [Caldicellulosiruptor obsidiansis OB47]
gi|311775521|gb|ADQ05008.1| 30S ribosomal protein S11 [Caldicellulosiruptor owensensis OL]
gi|311777271|gb|ADQ06757.1| 30S ribosomal protein S11 [Caldicellulosiruptor hydrothermalis 108]
gi|311795865|gb|EFR12229.1| 30S ribosomal protein S11 [Caldicellulosiruptor lactoaceticus 6A]
gi|312181053|gb|ADQ41223.1| 30S ribosomal protein S11 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312202538|gb|ADQ45865.1| 30S ribosomal protein S11 [Caldicellulosiruptor kronotskyensis
2002]
Length = 130
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R R ERKN+ G AH+ STFNNT +TITDP GN IAW+S GFSG++K +
Sbjct: 1 MARPARRTVRRSERKNVEKGIAHIHSTFNNTIVTITDPSGNAIAWASAGTCGFSGTKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A +HGM ++EV V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PFAAQLAAEKAAKMAMDHGMRTVEVYVKGPGAGREAAIRALQAAGLEVTLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|169830006|ref|YP_001700164.1| 30S ribosomal protein S11 [Lysinibacillus sphaericus C3-41]
gi|299541957|ref|ZP_07052280.1| 30S ribosomal protein S11 [Lysinibacillus fusiformis ZC1]
gi|226708383|sp|B1HMV6|RS11_LYSSC RecName: Full=30S ribosomal protein S11
gi|168994494|gb|ACA42034.1| 30S ribosomal protein S11 (BS11) [Lysinibacillus sphaericus C3-41]
gi|298725695|gb|EFI66336.1| 30S ribosomal protein S11 [Lysinibacillus fusiformis ZC1]
Length = 129
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI SG AH+ STFNNT +TITD GN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQTRKRRVKKNIESGIAHIRSTFNNTIVTITDMQGNAVSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSLEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|224510712|pdb|3FIH|K Chain K, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|251837147|pdb|3IY8|K Chain K, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
gi|294662227|pdb|2WWL|K Chain K, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387975|pdb|3OFO|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308387996|pdb|3OFP|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320033|pdb|3OFA|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320054|pdb|3OFB|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320137|pdb|3OFX|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320158|pdb|3OFY|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113622|pdb|3OAQ|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|315113643|pdb|3OAR|K Chain K, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
Length = 117
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++PFAAQVA + C+
Sbjct: 1 RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCAD 60
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 61 AVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 117
>gi|163938144|ref|YP_001643028.1| 30S ribosomal protein S11 [Bacillus weihenstephanensis KBAB4]
gi|229009645|ref|ZP_04166871.1| 30S ribosomal protein S11 [Bacillus mycoides DSM 2048]
gi|229053982|ref|ZP_04195416.1| 30S ribosomal protein S11 [Bacillus cereus AH603]
gi|229131144|ref|ZP_04260056.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST196]
gi|229165124|ref|ZP_04292919.1| 30S ribosomal protein S11 [Bacillus cereus AH621]
gi|226708331|sp|A9VPA3|RS11_BACWK RecName: Full=30S ribosomal protein S11
gi|163860341|gb|ABY41400.1| ribosomal protein S11 [Bacillus weihenstephanensis KBAB4]
gi|228618387|gb|EEK75417.1| 30S ribosomal protein S11 [Bacillus cereus AH621]
gi|228652357|gb|EEL08282.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST196]
gi|228721400|gb|EEL72921.1| 30S ribosomal protein S11 [Bacillus cereus AH603]
gi|228751667|gb|EEM01467.1| 30S ribosomal protein S11 [Bacillus mycoides DSM 2048]
Length = 129
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGIAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + S A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAASKVAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|167036827|ref|YP_001664405.1| 30S ribosomal protein S11 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039546|ref|YP_001662531.1| 30S ribosomal protein S11 [Thermoanaerobacter sp. X514]
gi|256752658|ref|ZP_05493510.1| ribosomal protein S11 [Thermoanaerobacter ethanolicus CCSD1]
gi|300915203|ref|ZP_07132518.1| 30S ribosomal protein S11 [Thermoanaerobacter sp. X561]
gi|307725127|ref|YP_003904878.1| 30S ribosomal protein S11 [Thermoanaerobacter sp. X513]
gi|320115249|ref|YP_004185408.1| 30S ribosomal protein S11 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|226708427|sp|B0KCM6|RS11_THEP3 RecName: Full=30S ribosomal protein S11
gi|226708428|sp|B0K5R9|RS11_THEPX RecName: Full=30S ribosomal protein S11
gi|166853786|gb|ABY92195.1| ribosomal protein S11 [Thermoanaerobacter sp. X514]
gi|166855661|gb|ABY94069.1| ribosomal protein S11 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748478|gb|EEU61530.1| ribosomal protein S11 [Thermoanaerobacter ethanolicus CCSD1]
gi|300888927|gb|EFK84074.1| 30S ribosomal protein S11 [Thermoanaerobacter sp. X561]
gi|307582188|gb|ADN55587.1| 30S ribosomal protein S11 [Thermoanaerobacter sp. X513]
gi|319928340|gb|ADV79025.1| 30S ribosomal protein S11 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 130
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R R RE+K++ G AH+ STFNNT +TITDP GNTI+W+S +GF GSRK++
Sbjct: 1 MAKRVKRAGRKREKKHVERGIAHIHSTFNNTIVTITDPAGNTISWASAGTIGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HGM +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PFAAQMAAESAAKSAMEHGMKTVDVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|254483460|ref|ZP_05096689.1| ribosomal protein S11 [marine gamma proteobacterium HTCC2148]
gi|214036334|gb|EEB77012.1| ribosomal protein S11 [marine gamma proteobacterium HTCC2148]
Length = 113
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 60/112 (53%), Positives = 82/112 (73%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AHV ++FNNT +TITD GNT++W++ GF GSRK++PFAAQVA + A+ +
Sbjct: 2 DGIAHVHASFNNTIVTITDRQGNTLSWATAGGSGFRGSRKSTPFAAQVAAERAGEAAKEY 61
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HNGCRP K+RR+
Sbjct: 62 GLKNLDVQVKGPGPGRESAVRALNACGYKIANITDVTPIPHNGCRPPKKRRV 113
>gi|192359683|ref|YP_001981231.1| 30S ribosomal protein S11 [Cellvibrio japonicus Ueda107]
gi|226708341|sp|B3PK60|RS11_CELJU RecName: Full=30S ribosomal protein S11
gi|190685848|gb|ACE83526.1| ribosomal protein S11 [Cellvibrio japonicus Ueda107]
Length = 131
Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 58/113 (51%), Positives = 82/113 (72%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+ G AH+ ++FNNT +TITD GN +AW++ GF GSRK++PFAAQVA + A+
Sbjct: 19 IDGVAHIHASFNNTIVTITDRQGNALAWATSGGSGFRGSRKSTPFAAQVAAERAGEAAKE 78
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +L+V+V G G GR+SA+RAL +G+ I +I DVT I HNGCRP K+RR+
Sbjct: 79 YGLKNLDVEVKGPGPGRESAVRALNNVGYKITNITDVTPIPHNGCRPPKKRRV 131
>gi|113170452|ref|YP_717244.1| Rps11 [Ostreococcus tauri]
gi|122228942|sp|Q0P3L1|RR11_OSTTA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|112806859|emb|CAL36366.1| Rps11 [Ostreococcus tauri]
Length = 130
Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + R+ + G H+++TFNNT +TI+D G IA SS GF G+RK +
Sbjct: 1 MATKQRKVTQKKSRRKVQRGVVHILATFNNTLVTISDRSGLVIASSSAGACGFRGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A+++ KA ++G+ ++V V G GAGR+ A+RAL+ +G + I DVT + HN
Sbjct: 61 PFAAQTASEEAVRKALDYGLKYVDVMVKGPGAGREMAIRALQQLGLGVTLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|86609044|ref|YP_477806.1| 30S ribosomal protein S11 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123737996|sp|Q2JL75|RS11_SYNJB RecName: Full=30S ribosomal protein S11
gi|86557586|gb|ABD02543.1| ribosomal protein S11 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 128
Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R + +KNI +G A++ STFNNT +TITDP+G+ ++W+S GF G++K +P
Sbjct: 1 MARQQRRGR-KVKKNIPNGVAYIQSTFNNTIVTITDPNGDVVSWASAGSTGFKGAKKGTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A +GM +EV VSG GAGR++A+RAL+A G I I D+T I HNG
Sbjct: 60 FAAQMAAESAARQAMENGMRQIEVMVSGPGAGRETAIRALQATGLEITLIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|86606120|ref|YP_474883.1| 30S ribosomal protein S11 [Synechococcus sp. JA-3-3Ab]
gi|123738107|sp|Q2JUJ4|RS11_SYNJA RecName: Full=30S ribosomal protein S11
gi|86554662|gb|ABC99620.1| ribosomal protein S11 [Synechococcus sp. JA-3-3Ab]
Length = 128
Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R + +KN+ +G A++ STFNNT +TITDP+G+ ++W+S GF G++K +P
Sbjct: 1 MARQQRRGR-KVKKNVPNGVAYIQSTFNNTIVTITDPNGDVVSWASAGSTGFKGAKKGTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A +GM +EV VSG GAGR++A+RAL+A G I I D+T I HNG
Sbjct: 60 FAAQMAAESAARQAMENGMRQIEVMVSGPGAGRETAIRALQATGLEITLIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|317496165|ref|ZP_07954525.1| 30S ribosomal protein S11 [Gemella moribillum M424]
gi|316913740|gb|EFV35226.1| 30S ribosomal protein S11 [Gemella moribillum M424]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNN+ +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQSRKRRVKKNIQNGIAHIRSTFNNSIVTITDEHGNAVSWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++V V G GAGR++A+RAL++ G + SI DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMRYVDVTVKGPGAGREAAIRALQSAGLEVTSIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|228989344|ref|ZP_04149335.1| 30S ribosomal protein S11 [Bacillus pseudomycoides DSM 12442]
gi|228995527|ref|ZP_04155195.1| 30S ribosomal protein S11 [Bacillus mycoides Rock3-17]
gi|229003152|ref|ZP_04160998.1| 30S ribosomal protein S11 [Bacillus mycoides Rock1-4]
gi|228758115|gb|EEM07314.1| 30S ribosomal protein S11 [Bacillus mycoides Rock1-4]
gi|228764256|gb|EEM13135.1| 30S ribosomal protein S11 [Bacillus mycoides Rock3-17]
gi|228770422|gb|EEM18995.1| 30S ribosomal protein S11 [Bacillus pseudomycoides DSM 12442]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGIAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKVAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|327438302|dbj|BAK14667.1| ribosomal protein S11 [Solibacillus silvestris StLB046]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI SG AH+ STFNNT +TITD GN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQTRKRRVKKNIESGVAHIRSTFNNTIVTITDMQGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HG+ ++EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSMEHGLKNIEVTVKGPGSGREAAVRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|148655312|ref|YP_001275517.1| 30S ribosomal protein S11 [Roseiflexus sp. RS-1]
gi|166231831|sp|A5USG4|RS11_ROSS1 RecName: Full=30S ribosomal protein S11
gi|148567422|gb|ABQ89567.1| SSU ribosomal protein S11P [Roseiflexus sp. RS-1]
Length = 139
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 69/128 (53%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
R + RE+KN+ G+AH+ STFNNT +TITDP GN I WSS GF GSRK++P+
Sbjct: 12 ATKRQRGKRREKKNVPRGQAHIQSTFNNTIVTITDPAGNVICWSSAGQNGFKGSRKSTPY 71
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQVA ++ + KA +GM +EV V G GAGR++A+R+L+A G + +I DVT I HNGC
Sbjct: 72 AAQVAAENAARKAMENGMRQVEVFVKGPGAGREAAIRSLQAAGLQVTAITDVTPIPHNGC 131
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 132 RPPKRRRV 139
>gi|323490648|ref|ZP_08095853.1| 30S ribosomal protein S11 (BS11) [Planococcus donghaensis MPA1U2]
gi|323395740|gb|EGA88581.1| 30S ribosomal protein S11 (BS11) [Planococcus donghaensis MPA1U2]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI SG AH+ STFNNT +TITD GN ++WSS +GF GSRK++P
Sbjct: 1 MARKQQTRKRRVKKNIESGIAHIRSTFNNTIVTITDMQGNAVSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|325269510|ref|ZP_08136126.1| 30S ribosomal protein S11 [Prevotella multiformis DSM 16608]
gi|324988129|gb|EGC20096.1| 30S ribosomal protein S11 [Prevotella multiformis DSM 16608]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKSATSKKRNVRVDALGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCSKVAFDLGLRKVKAYVKGPGNGRESAIRAVNAAGIQVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|229083456|ref|ZP_04215804.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-44]
gi|228699889|gb|EEL52526.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-44]
Length = 129
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGVAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKVAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|325856040|ref|ZP_08171929.1| ribosomal protein S11 [Prevotella denticola CRIS 18C-A]
gi|327313215|ref|YP_004328652.1| 30S ribosomal protein S11 [Prevotella denticola F0289]
gi|325483712|gb|EGC86676.1| ribosomal protein S11 [Prevotella denticola CRIS 18C-A]
gi|326944535|gb|AEA20420.1| ribosomal protein S11 [Prevotella denticola F0289]
Length = 129
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKSATSKKRNVRVDALGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCSKVAYDLGLRKVKAFVKGPGNGRESAIRAVNAAGIQVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|323703522|ref|ZP_08115168.1| 30S ribosomal protein S11 [Desulfotomaculum nigrificans DSM 574]
gi|323531513|gb|EGB21406.1| 30S ribosomal protein S11 [Desulfotomaculum nigrificans DSM 574]
Length = 129
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + +E+KN+ G AH+ STFNNT +TITD GNT+ WSS VGF GSRK++P
Sbjct: 1 MARRQVRAKRKEKKNVEQGVAHIKSTFNNTIVTITDLKGNTLGWSSAGQVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +EV V G G+GR++A+R+L+A G + I DVT I HNG
Sbjct: 61 FAAQMAAEAAAKDAMEHGLKEVEVTVKGPGSGREAAIRSLQAAGLEVSVIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|288925690|ref|ZP_06419622.1| 30S ribosomal protein S11 [Prevotella buccae D17]
gi|315606479|ref|ZP_07881494.1| 30S ribosomal protein S11 [Prevotella buccae ATCC 33574]
gi|288337628|gb|EFC75982.1| 30S ribosomal protein S11 [Prevotella buccae D17]
gi|315251885|gb|EFU31859.1| 30S ribosomal protein S11 [Prevotella buccae ATCC 33574]
Length = 129
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKATSKKRNVRVEALGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHTAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|320160439|ref|YP_004173663.1| 30S ribosomal protein S11 [Anaerolinea thermophila UNI-1]
gi|319994292|dbj|BAJ63063.1| 30S ribosomal protein S11 [Anaerolinea thermophila UNI-1]
Length = 134
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIR-----NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M ++ R + ++ + SG+ H+ ++FNNT +T+TD GNT+ W S GF GS
Sbjct: 1 MAQNVRSARRGGSAKKVKRTLTSGQIHIYASFNNTIVTVTDQQGNTVCWGSSGSAGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAA++A + A G+ ++ V G G GR+SA+RA++A+G + SI DVT
Sbjct: 61 RKSTPFAARLAAEQAVKAAMAMGLQEADLIVKGPGPGRESAIRAVQAMGVRVRSIADVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP K+RR+
Sbjct: 121 VPHNGCRPPKKRRV 134
>gi|281422227|ref|ZP_06253226.1| 30S ribosomal protein S11 [Prevotella copri DSM 18205]
gi|281403732|gb|EFB34412.1| 30S ribosomal protein S11 [Prevotella copri DSM 18205]
Length = 129
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKQKATSKKRNVRVDAIGQLHVHSSFNNIIVSLANNEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|168704699|ref|ZP_02736976.1| 30S ribosomal protein S11 [Gemmata obscuriglobus UQM 2246]
Length = 126
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + R+N+ G AHV STFNNT +TITD +G+T+ SS VGF GSRK++P
Sbjct: 1 MAKSK---KKKTRRNVSRGVAHVQSTFNNTIVTITDTNGDTLCHSSGGAVGFKGSRKSTP 57
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A ++C++KA G+ +EV+V G GAGR+SA+ AL+A G + +I DVT + HNG
Sbjct: 58 FAAQRAAEECASKASKFGVKEVEVRVKGPGAGRESAITALQASGLNVKAIEDVTPLPHNG 117
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 118 CRPPKKRRV 126
>gi|119899682|ref|YP_934895.1| 30S ribosomal protein S11 [Azoarcus sp. BH72]
gi|152060574|sp|A1KB03|RS11_AZOSB RecName: Full=30S ribosomal protein S11
gi|119672095|emb|CAL96009.1| 30S ribosomal protein S11 [Azoarcus sp. BH72]
Length = 129
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +++R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTATKVRKKIKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ G+ +LEV++ G G GR+SA+RAL A+G I SI D+T I HNG
Sbjct: 61 FAAQVAAEAAGKVAQECGVKNLEVRIKGPGPGRESAVRALNALGMKISSITDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|22297648|ref|NP_680895.1| 30S ribosomal protein S11 [Thermosynechococcus elongatus BP-1]
gi|48474283|sp|P59379|RS11_THEEB RecName: Full=30S ribosomal protein S11
gi|22293825|dbj|BAC07657.1| 30S ribosomal protein S11 [Thermosynechococcus elongatus BP-1]
Length = 130
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M S R ++++N+ SG AH+ STFNNT ++ITDP+G IAW+S GF G++K +
Sbjct: 1 MAPSAKRSGPRKQKRNVPSGVAHIQSTFNNTIVSITDPNGEVIAWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A D+ + +A + GM +EV VSG G+GR++A+RAL+A G I I DVT I HN
Sbjct: 61 PFAAQTAADNAARRAIDQGMRQIEVMVSGPGSGRETAIRALQAAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|303237496|ref|ZP_07324061.1| 30S ribosomal protein S11 [Prevotella disiens FB035-09AN]
gi|302482316|gb|EFL45346.1| 30S ribosomal protein S11 [Prevotella disiens FB035-09AN]
Length = 129
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKSATSKKRNVRVDAMGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAFVKGPGNGRESAIRAVNAAGILVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|254423057|ref|ZP_05036775.1| ribosomal protein S11 [Synechococcus sp. PCC 7335]
gi|196190546|gb|EDX85510.1| ribosomal protein S11 [Synechococcus sp. PCC 7335]
Length = 130
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + +++KNI +G AH+ STFNNT +TITD GN ++W+S GF G++K +
Sbjct: 1 MAKPIRKTGPRKQKKNIPNGVAHIQSTFNNTIVTITDASGNAVSWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A D + +A + GM EV+VSG G+GR++A+RAL+ G I I DVT I HN
Sbjct: 61 PFAAQTAADGAARRAIDQGMRQCEVQVSGPGSGRETAIRALQGAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|326793581|ref|YP_004311401.1| 30S ribosomal protein S11 [Marinomonas mediterranea MMB-1]
gi|326544345|gb|ADZ89565.1| 30S ribosomal protein S11 [Marinomonas mediterranea MMB-1]
Length = 130
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + + +K +V G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPAARSTKKKVKKTVVDGVAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A AQ G+ +++V + G G GR+SA+RAL A+G I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGAVAQEFGLKNVDVMIKGPGPGRESAVRALNALGLRINNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|300088171|ref|YP_003758693.1| 30S ribosomal protein S11 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527904|gb|ADJ26372.1| 30S ribosomal protein S11 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 130
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + ++ +E+KNI G+A + +TFNNT IT+TD GN +A +S GF GSRK++
Sbjct: 1 MATKKRTGVKKKEKKNIPVGKAFIQATFNNTIITLTDLQGNALATTSAGNAGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A +C KA G+ +EV V G G+GR++A+R L+A G + I DVT I HN
Sbjct: 61 PYAAQMAAQNCVKKAMESGLRQVEVFVKGPGSGREAAIRQLQASGLVVTGIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRAPKRRRV 130
>gi|289435873|ref|YP_003465745.1| hypothetical protein lse_2512 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172117|emb|CBH28663.1| rpsK [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313631791|gb|EFR98971.1| 30S ribosomal protein S11 [Listeria seeligeri FSL N1-067]
gi|313636143|gb|EFS02006.1| 30S ribosomal protein S11 [Listeria seeligeri FSL S4-171]
Length = 129
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTQGNALAWSSAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|124302939|ref|YP_001023734.1| ribosomal protein S11 [Angiopteris evecta]
gi|152060512|sp|A2T366|RR11_ANGEV RecName: Full=30S ribosomal protein S11, chloroplastic
gi|110628337|gb|ABG79633.1| ribosomal protein S11 [Angiopteris evecta]
Length = 130
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +I + ++ I G H+ ++FNNT +T+TD G ++WSS GF G+RK++
Sbjct: 1 MAKPIRKIGLRKGKRKIPKGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GR++ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAENAIRTLIDQGMKQAEVMISGPGPGRETALRAIRRSGVVLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|87122792|ref|ZP_01078665.1| 30S ribosomal protein S11 [Marinomonas sp. MED121]
gi|86161957|gb|EAQ63249.1| 30S ribosomal protein S11 [Marinomonas sp. MED121]
Length = 130
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + + +K +V G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPATRNTKKKVKKTVVDGVAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A AQ G+ +++V + G G GR+SA+RAL A+G I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGAVAQEFGLKNVDVMIKGPGPGRESAVRALNALGLRINNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|152998248|ref|YP_001343083.1| 30S ribosomal protein S11 [Marinomonas sp. MWYL1]
gi|189040420|sp|A6W369|RS11_MARMS RecName: Full=30S ribosomal protein S11
gi|150839172|gb|ABR73148.1| ribosomal protein S11 [Marinomonas sp. MWYL1]
Length = 130
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + + +K +V G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPATRNTKKKVKKTVVDGVAHVHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + AQ G+ +++V + G G GR+SA+RAL A+G I +I DVT I HN
Sbjct: 61 PFAAQVAAERAGTVAQEFGLKNVDVMIKGPGPGRESAVRALNALGLRINNITDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|89255693|ref|YP_513054.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
LVS]
gi|115314193|ref|YP_762916.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
OSU18]
gi|156501641|ref|YP_001427706.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010990|ref|ZP_02275921.1| ribosomal protein S11 [Francisella tularensis subsp. holarctica
FSC200]
gi|254367074|ref|ZP_04983109.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
257]
gi|290953190|ref|ZP_06557811.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
URFT1]
gi|295313558|ref|ZP_06804147.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
URFT1]
gi|122325769|sp|Q0BNQ5|RS11_FRATO RecName: Full=30S ribosomal protein S11
gi|122999776|sp|Q2A5E7|RS11_FRATH RecName: Full=30S ribosomal protein S11
gi|166231813|sp|A7N9U7|RS11_FRATF RecName: Full=30S ribosomal protein S11
gi|89143524|emb|CAJ78700.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
LVS]
gi|115129092|gb|ABI82279.1| ribosomal protein S11 [Francisella tularensis subsp. holarctica
OSU18]
gi|134252899|gb|EBA51993.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
257]
gi|156252244|gb|ABU60750.1| ribosomal protein S11 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 129
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVPDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADMALEYGVKNVDVLVKGPGSGRDSAIRALNAKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|241834460|ref|XP_002414992.1| 40S ribosomal protein S14, putative [Ixodes scapularis]
gi|215509204|gb|EEC18657.1| 40S ribosomal protein S14, putative [Ixodes scapularis]
Length = 133
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+K++ G AHV ++FNNT ITITD GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 16 VKKSVSDGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTPFAAQVAAETAG 75
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A +G+ +LEV++ G G GR+S++RAL A+G I SI D+T + HNGCRP KRRRI
Sbjct: 76 RTAMEYGIKNLEVRIKGPGPGRESSVRALNALGIKITSIADITPVPHNGCRPPKRRRI 133
>gi|15644223|ref|NP_229274.1| 30S ribosomal protein S11 [Thermotoga maritima MSB8]
gi|7388113|sp|Q9X1I4|RS11_THEMA RecName: Full=30S ribosomal protein S11
gi|4982040|gb|AAD36542.1|AE001798_7 ribosomal protein S11 [Thermotoga maritima MSB8]
Length = 130
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +++K + G H+ STFNNT IT+TD GNT+ W+S VGF G+RK +
Sbjct: 1 MARKRGGSSKKQKKVSFDYGVVHIKSTFNNTIITLTDKDGNTLTWASGGTVGFEGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + +A G+ ++V V G G GR+ A+R L+ G I I DVT I N
Sbjct: 61 PYAAQLAADKVAREALRMGIKKVDVLVKGPGPGREPAIRTLQGAGLEINQIKDVTPIPFN 120
Query: 120 GCRPRKRRRI 129
GCRP+KRRR+
Sbjct: 121 GCRPKKRRRV 130
>gi|121602190|ref|YP_989020.1| 30S ribosomal protein S11 [Bartonella bacilliformis KC583]
gi|152060576|sp|A1USR7|RS11_BARBK RecName: Full=30S ribosomal protein S11
gi|120614367|gb|ABM44968.1| ribosomal protein S11 [Bartonella bacilliformis KC583]
Length = 129
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 83/129 (64%), Positives = 97/129 (75%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R+R ERKNI S H+ STFNNT ITITD G+TIAWSS GF GSRK++P
Sbjct: 1 MAKEAKRVRRSERKNISSSVVHINSTFNNTMITITDSQGDTIAWSSAGAQGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA DC+ KA+ HG+ SLEV+V G G+GR+SALRAL++ GF I SI DVT I HNG
Sbjct: 61 FAAQVAAADCAKKAEEHGVRSLEVEVCGPGSGRESALRALQSAGFIITSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|218779738|ref|YP_002431056.1| ribosomal protein S11 [Desulfatibacillum alkenivorans AK-01]
gi|226708358|sp|B8FER1|RS11_DESAA RecName: Full=30S ribosomal protein S11
gi|218761122|gb|ACL03588.1| ribosomal protein S11 [Desulfatibacillum alkenivorans AK-01]
Length = 128
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R R++KNI SG AH+ +TFNNT +TITDP G ++WSS VVGF GSRK++P
Sbjct: 1 MAKRKV-ARKRDKKNIPSGVAHIQATFNNTIVTITDPSGAVVSWSSAGVVGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D + KA HGM ++EV V G G+GR+SALRAL+ G +V + DVT + HNG
Sbjct: 60 FAAQLAAEDAAKKAMEHGMRNVEVYVKGPGSGRESALRALQGAGLNVVMLRDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 120 CRPRKRRRV 128
>gi|313204942|ref|YP_004043599.1| SSU ribosomal protein s11p [Paludibacter propionicigenes WB4]
gi|312444258|gb|ADQ80614.1| SSU ribosomal protein S11P [Paludibacter propionicigenes WB4]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K G+ HV S+FNN +T+T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRVVKVDGVGQLHVHSSFNNIIVTLTNSDGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DCS A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCSKIALDLGLRKVKAYVKGPGNGRESAIRTVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|134298119|ref|YP_001111615.1| 30S ribosomal protein S11 [Desulfotomaculum reducens MI-1]
gi|172044237|sp|A4J137|RS11_DESRM RecName: Full=30S ribosomal protein S11
gi|134050819|gb|ABO48790.1| SSU ribosomal protein S11P [Desulfotomaculum reducens MI-1]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + +++KN+ G AH+ STFNNT +TITD GNT+ WSS VGF GSRK++P
Sbjct: 1 MARRQVRTKRKDKKNVEQGVAHIKSTFNNTIVTITDLKGNTLGWSSAGQVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +EV V G G+GR++A+R+L+A G + I DVT I HNG
Sbjct: 61 FAAQMAAEAAAKDAMEHGLKEVEVTVKGPGSGREAAIRSLQAAGLEVNMIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|325299107|ref|YP_004259024.1| 30S ribosomal protein S11 [Bacteroides salanitronis DSM 18170]
gi|324318660|gb|ADY36551.1| 30S ribosomal protein S11 [Bacteroides salanitronis DSM 18170]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGLRKVKAYVKGPGNGRESAIRTVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|198282662|ref|YP_002218983.1| 30S ribosomal protein S11 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666308|ref|YP_002424855.1| ribosomal protein S11 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247183|gb|ACH82776.1| ribosomal protein S11 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518521|gb|ACK79107.1| ribosomal protein S11 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 131
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKS--PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ +R R + +KN++ G AH+ ++FNNT ITI+D GN + W+S GF GSRK+
Sbjct: 1 MAKTQTNTRARKKVKKNVLDGVAHIYASFNNTIITISDRQGNVLTWASSGGSGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA ++ KAQ G+ +L+V+V G G GR+S +RAL +IGF I SI DVT I H
Sbjct: 61 TPFAAQVAAENAGKKAQEFGVKNLDVEVRGPGPGRESTVRALHSIGFRIASIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|160914536|ref|ZP_02076751.1| hypothetical protein EUBDOL_00542 [Eubacterium dolichum DSM 3991]
gi|158433694|gb|EDP11983.1| hypothetical protein EUBDOL_00542 [Eubacterium dolichum DSM 3991]
Length = 131
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 1 MPK--SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + + RKNI G AH+ STFNNT +TITD GN +AWSS +GF GSRK+
Sbjct: 1 MAKNVKAGARKRKARKNIARGCAHIHSTFNNTIVTITDESGNAVAWSSAGALGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + A +GM ++ V V G G GR++A+RAL+ G I I DVT I H
Sbjct: 61 TPFAAQMAGEAAGKAAMENGMKTVSVNVKGPGPGREAAVRALQVAGLEITMINDVTPIPH 120
Query: 119 NGCRPRKRRR 128
NGCRP KR R
Sbjct: 121 NGCRPPKRPR 130
>gi|260592740|ref|ZP_05858198.1| 30S ribosomal protein S11 [Prevotella veroralis F0319]
gi|302345099|ref|YP_003813452.1| 30S ribosomal protein S11 [Prevotella melaninogenica ATCC 25845]
gi|260535271|gb|EEX17888.1| 30S ribosomal protein S11 [Prevotella veroralis F0319]
gi|302150029|gb|ADK96291.1| 30S ribosomal protein S11 [Prevotella melaninogenica ATCC 25845]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKSATSKKRNVRVDALGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCSKVAFDLGLRKVKAFVKGPGNGRESAIRAVNAAGIQVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|222099993|ref|YP_002534561.1| 30S ribosomal protein S11 [Thermotoga neapolitana DSM 4359]
gi|254811051|sp|B9K8B2|RS11_THENN RecName: Full=30S ribosomal protein S11
gi|221572383|gb|ACM23195.1| 30S ribosomal protein S11 [Thermotoga neapolitana DSM 4359]
Length = 131
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
Query: 1 MP-KSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + R +++K + G H+ STFNNT IT+TD GNT+ W+S VGF G+RK
Sbjct: 1 MARKKGTSTRKKQKKLSFDYGVVHIKSTFNNTIITLTDKDGNTLTWASGGTVGFEGTRKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A D + +A G+ ++V V G G GR+ A+R L+ G I I DVT I
Sbjct: 61 TPYAAQLAADKVAREALRMGIKRVDVLVKGPGPGREPAIRTLQGAGLEINQIKDVTPIPF 120
Query: 119 NGCRPRKRRRI 129
NGCRP+KRRR+
Sbjct: 121 NGCRPKKRRRV 131
>gi|86135792|ref|ZP_01054371.1| 30S ribosomal protein S11 [Roseobacter sp. MED193]
gi|85826666|gb|EAQ46862.1| 30S ribosomal protein S11 [Roseobacter sp. MED193]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/129 (60%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ERKNI +G AHV S+FNNT+I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDKTRTKKKERKNIATGVAHVNSSFNNTKILISDVQGNAIAWSSAGSMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D KAQ+HG+ +LEV+V G G GR+SALRAL AIGF I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAGKKAQDHGVKTLEVEVQGPGGGRESALRALAAIGFNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|53803439|ref|YP_114765.1| 30S ribosomal protein S11 [Methylococcus capsulatus str. Bath]
gi|59798625|sp|Q605D5|RS11_METCA RecName: Full=30S ribosomal protein S11
gi|53757200|gb|AAU91491.1| ribosomal protein S11 [Methylococcus capsulatus str. Bath]
Length = 128
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R +++I G AH+ ++FNNT ITITD GN ++W+S GF GSRK++P
Sbjct: 1 MA-TTGRPVKRVKRDISDGIAHISASFNNTIITITDRKGNALSWASAGASGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A A+ +G+ +L+V V+G G GR+SA+R+L A+GF IV++ D T + HNG
Sbjct: 60 FAAQVAAEKAGAVAKEYGIKNLDVHVTGPGPGRESAVRSLNALGFKIVNVVDTTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|257440242|ref|ZP_05615997.1| 30S ribosomal protein S11 [Faecalibacterium prausnitzii A2-165]
gi|313112852|ref|ZP_07798498.1| 30S ribosomal protein S11 [Faecalibacterium cf. prausnitzii
KLE1255]
gi|257197276|gb|EEU95560.1| 30S ribosomal protein S11 [Faecalibacterium prausnitzii A2-165]
gi|295101437|emb|CBK98982.1| SSU ribosomal protein S11P [Faecalibacterium prausnitzii L2-6]
gi|310624757|gb|EFQ08066.1| 30S ribosomal protein S11 [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 136
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/126 (53%), Positives = 90/126 (71%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R++ +ERKNI +G+AH+ STFNNT +TITD GN ++W S + F GSRK++PFAA
Sbjct: 11 ANVRMKRKERKNIAAGQAHIQSTFNNTVVTITDLQGNAVSWCSSGSLNFRGSRKSTPFAA 70
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q A + + A HGM ++EV V G GAGR+SA+RAL+A G + I DVT I HNGCRP
Sbjct: 71 QSAAETAAKVAIEHGMKTVEVYVKGPGAGRESAIRALQATGLEVTLIKDVTPIPHNGCRP 130
Query: 124 RKRRRI 129
KRRR+
Sbjct: 131 PKRRRV 136
>gi|150008960|ref|YP_001303703.1| 30S ribosomal protein S11 [Parabacteroides distasonis ATCC 8503]
gi|154494404|ref|ZP_02033724.1| hypothetical protein PARMER_03759 [Parabacteroides merdae ATCC
43184]
gi|218262263|ref|ZP_03476786.1| hypothetical protein PRABACTJOHN_02460 [Parabacteroides johnsonii
DSM 18315]
gi|255014790|ref|ZP_05286916.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_7]
gi|256841039|ref|ZP_05546546.1| 30S ribosomal protein S11 [Parabacteroides sp. D13]
gi|262383850|ref|ZP_06076986.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_33B]
gi|298375807|ref|ZP_06985763.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_19]
gi|301312008|ref|ZP_07217930.1| 30S ribosomal protein S11 [Bacteroides sp. 20_3]
gi|166231822|sp|A6LEG7|RS11_PARD8 RecName: Full=30S ribosomal protein S11
gi|149937384|gb|ABR44081.1| 30S ribosomal protein S11 [Parabacteroides distasonis ATCC 8503]
gi|154085848|gb|EDN84893.1| hypothetical protein PARMER_03759 [Parabacteroides merdae ATCC
43184]
gi|218223486|gb|EEC96136.1| hypothetical protein PRABACTJOHN_02460 [Parabacteroides johnsonii
DSM 18315]
gi|256736882|gb|EEU50209.1| 30S ribosomal protein S11 [Parabacteroides sp. D13]
gi|262294748|gb|EEY82680.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_33B]
gi|298266844|gb|EFI08501.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_19]
gi|300830110|gb|EFK60758.1| 30S ribosomal protein S11 [Bacteroides sp. 20_3]
Length = 129
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K G+AH+ S+FNN +++ + G I+WSS +GF S+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDAYGQAHIHSSFNNIIVSLANSEGQVISWSSAGKMGFRSSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++V V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGLRKVKVFVKGPGNGRESAIRTIHGAGIEVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|83815931|ref|YP_445190.1| 30S ribosomal protein S11 [Salinibacter ruber DSM 13855]
gi|83757325|gb|ABC45438.1| 30S ribosomal protein S11 [Salinibacter ruber DSM 13855]
Length = 158
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/134 (46%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIRNR--ERKNIV---SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M R R ++KN+V +GRA+V +TFNN +T+TD +GNTI+W+S +GF GS
Sbjct: 25 MADGDDRGGKRTPQKKNVVVESNGRAYVKATFNNVIVTLTDQYGNTISWASAGKMGFKGS 84
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RKN+P+AAQ A + + +A G+ ++V V G G+GR+ A+RA+ G + SI DVT
Sbjct: 85 RKNTPYAAQKAGESAANEAYELGLRRVDVYVKGPGSGREGAIRAMSESGLEVASIRDVTP 144
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRR+
Sbjct: 145 LPHNGCRPPKRRRV 158
>gi|124112111|ref|YP_001019082.1| ribosomal protein S11 [Chlorokybus atmophyticus]
gi|152060516|sp|Q19VB6|RR11_CHLAT RecName: Full=30S ribosomal protein S11, chloroplastic
gi|124012220|gb|ABD62243.2| ribosomal protein S11 [Chlorokybus atmophyticus]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +I + ++ I G HV +TFNNT +TITD G I+WSS GF G++K +
Sbjct: 1 MAKKIRKIGIRKGKRKIPKGVVHVQATFNNTIVTITDIKGEVISWSSAGSCGFKGTKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ +A GM E+ VSG G+GR++A+RA+R G I + DVT I HN
Sbjct: 61 PFAAQTAAENAVRQAIEQGMKEAEITVSGPGSGRETAIRAIRTAGLGITVLKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|300728418|ref|ZP_07061780.1| ribosomal protein S11 [Prevotella bryantii B14]
gi|299774337|gb|EFI70967.1| ribosomal protein S11 [Prevotella bryantii B14]
Length = 129
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKATSKKRNVRVDAIGQLHVHSSFNNIIVSLANNEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ + G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHSAGIEVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|154249791|ref|YP_001410616.1| 30S ribosomal protein S11 [Fervidobacterium nodosum Rt17-B1]
gi|171769362|sp|A7HM26|RS11_FERNB RecName: Full=30S ribosomal protein S11
gi|154153727|gb|ABS60959.1| ribosomal protein S11 [Fervidobacterium nodosum Rt17-B1]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + ++R + G H+ ST+NNT I++TDP G+ ++W+S GF G+RK +
Sbjct: 1 MAKGRTTRTKQKKRVAVDHGVVHIKSTYNNTIISLTDPTGHVLSWASGGTTGFEGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + A G+ ++V V G GAGR++A+R L+A G I +I D T I N
Sbjct: 61 PYAAQLAADKVAKDAVKMGIKRVDVIVKGPGAGRETAIRTLQAAGLEIDNIRDATPIPFN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|148270448|ref|YP_001244908.1| 30S ribosomal protein S11 [Thermotoga petrophila RKU-1]
gi|170289157|ref|YP_001739395.1| ribosomal protein S11 [Thermotoga sp. RQ2]
gi|281412755|ref|YP_003346834.1| 30S ribosomal protein S11 [Thermotoga naphthophila RKU-10]
gi|166231841|sp|A5IMA9|RS11_THEP1 RecName: Full=30S ribosomal protein S11
gi|226708429|sp|B1LBL4|RS11_THESQ RecName: Full=30S ribosomal protein S11
gi|147735992|gb|ABQ47332.1| SSU ribosomal protein S11P [Thermotoga petrophila RKU-1]
gi|170176660|gb|ACB09712.1| ribosomal protein S11 [Thermotoga sp. RQ2]
gi|281373858|gb|ADA67420.1| 30S ribosomal protein S11 [Thermotoga naphthophila RKU-10]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKN-IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +++K G H+ STFNNT IT+TD GNT+ W+S VGF G+RK +
Sbjct: 1 MARKRGSSSRKQKKVGFDYGVVHIKSTFNNTIITLTDKDGNTLTWASGGTVGFEGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + +A G+ +++ V G G GR+ A+R L+ G I I DVT I N
Sbjct: 61 PYAAQLAADKVAREALRMGIKKVDILVKGPGPGREPAIRTLQGAGLEINQIKDVTPIPFN 120
Query: 120 GCRPRKRRRI 129
GCRP+KRRR+
Sbjct: 121 GCRPKKRRRV 130
>gi|21230386|ref|NP_636303.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21241759|ref|NP_641341.1| 30S ribosomal protein S11 [Xanthomonas axonopodis pv. citri str.
306]
gi|66769620|ref|YP_244382.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78046577|ref|YP_362752.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|188992832|ref|YP_001904842.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris
str. B100]
gi|289665159|ref|ZP_06486740.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669366|ref|ZP_06490441.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. musacearum
NCPPB4381]
gi|294627860|ref|ZP_06706439.1| 30S ribosomal protein S11 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664165|ref|ZP_06729551.1| 30S ribosomal protein S11 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325916509|ref|ZP_08178778.1| SSU ribosomal protein S11P [Xanthomonas vesicatoria ATCC 35937]
gi|325925365|ref|ZP_08186767.1| SSU ribosomal protein S11P [Xanthomonas perforans 91-118]
gi|59800195|sp|P0A0X2|RS11_XANCP RecName: Full=30S ribosomal protein S11
gi|59800196|sp|P0A0X3|RS11_XANAC RecName: Full=30S ribosomal protein S11
gi|81304425|sp|Q4URG1|RS11_XANC8 RecName: Full=30S ribosomal protein S11
gi|91207687|sp|Q3BWW1|RS11_XANC5 RecName: Full=30S ribosomal protein S11
gi|226708434|sp|B0RU60|RS11_XANCB RecName: Full=30S ribosomal protein S11
gi|21107131|gb|AAM35877.1| 30S ribosomal protein S11 [Xanthomonas axonopodis pv. citri str.
306]
gi|21111943|gb|AAM40227.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574952|gb|AAY50362.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78035007|emb|CAJ22652.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|167734592|emb|CAP52802.1| 30S ribosomal protein S11 [Xanthomonas campestris pv. campestris]
gi|292597774|gb|EFF41932.1| 30S ribosomal protein S11 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606068|gb|EFF49333.1| 30S ribosomal protein S11 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325537298|gb|EGD09025.1| SSU ribosomal protein S11P [Xanthomonas vesicatoria ATCC 35937]
gi|325544243|gb|EGD15624.1| SSU ribosomal protein S11P [Xanthomonas perforans 91-118]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + + ++ I G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPAEKKTKKKIKRVITDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|258513666|ref|YP_003189888.1| 30S ribosomal protein S11 [Desulfotomaculum acetoxidans DSM 771]
gi|257777371|gb|ACV61265.1| ribosomal protein S11 [Desulfotomaculum acetoxidans DSM 771]
Length = 129
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + RERKNI G AH+ STFNNT +TI D GN I+W+S VGF GSRK++P
Sbjct: 1 MARRTVRTKRRERKNIEQGVAHIKSTFNNTIVTIADIKGNAISWASAGGVGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +EV V G GAGR++A+R+L+A G + I DVT I HNG
Sbjct: 61 FAAQLAAETAAKAAMEHGLKEVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|160942872|ref|ZP_02090111.1| hypothetical protein FAEPRAM212_00348 [Faecalibacterium prausnitzii
M21/2]
gi|158445773|gb|EDP22776.1| hypothetical protein FAEPRAM212_00348 [Faecalibacterium prausnitzii
M21/2]
gi|295103948|emb|CBL01492.1| SSU ribosomal protein S11P [Faecalibacterium prausnitzii SL3/3]
Length = 136
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/126 (53%), Positives = 90/126 (71%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R++ +ERKNI +G+AH+ STFNNT +TITD GN ++W S + F GSRK++PFAA
Sbjct: 11 ANVRMKRKERKNIAAGQAHIQSTFNNTVVTITDLQGNAVSWCSSGSLNFRGSRKSTPFAA 70
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q A + + A HGM ++EV V G GAGR+SA+RAL+A G + I DVT I HNGCRP
Sbjct: 71 QSAAETAAKTAIEHGMKTVEVYVKGPGAGRESAIRALQATGLEVTLIKDVTPIPHNGCRP 130
Query: 124 RKRRRI 129
KRRR+
Sbjct: 131 PKRRRV 136
>gi|325921503|ref|ZP_08183358.1| SSU ribosomal protein S11P [Xanthomonas gardneri ATCC 19865]
gi|325548050|gb|EGD19049.1| SSU ribosomal protein S11P [Xanthomonas gardneri ATCC 19865]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + + ++ I G AHV ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPAEKKTKKKIKRVITDGVAHVHASFNNTIITITDRQGNALSWATSGGAGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|298531062|ref|ZP_07018463.1| 30S ribosomal protein S11 [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509085|gb|EFI32990.1| 30S ribosomal protein S11 [Desulfonatronospira thiodismutans
ASO3-1]
Length = 129
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +E+KNI +G H+ ++FNNT +TITD GN ++WSS +VGF GSRK +P
Sbjct: 1 MAKPRKTKKRKEKKNIPTGIVHINASFNNTTVTITDQTGNVVSWSSSGMVGFKGSRKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FA+Q A + + A +GM ++ + V G GAGR+SA+RA+ GF + I D+T I HNG
Sbjct: 61 FASQKAAETAARLAHENGMRTVGILVKGPGAGRESAMRAINTSGFKVTYIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|94500969|ref|ZP_01307494.1| 30S ribosomal protein S11 [Oceanobacter sp. RED65]
gi|94426909|gb|EAT11892.1| 30S ribosomal protein S11 [Oceanobacter sp. RED65]
Length = 129
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ + +K +V G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPQRNVKKKVKKTVVDGVAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A+ +G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAERAGEAAKEYGLKNLDVEVKGPGPGRESAVRALNACGYKIGNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|330850662|ref|YP_004376543.1| ribosomal protein S11 [Ptilidium pulcherrimum]
gi|302024791|gb|ADK89637.1| ribosomal protein S11 [Ptilidium pulcherrimum]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPKS +I R ++ + G H+ ++FNNT +T+TD G ++WSS GF G++K++
Sbjct: 1 MPKSMRKINLRRGKRRLPKGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM EV +SG G GRD+ALRA+R G T+ + DVT + HN
Sbjct: 61 PFAAQTAAENATRSLIDQGMKQAEVMISGPGPGRDTALRAIRRSGITLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|297618357|ref|YP_003703516.1| 30S ribosomal protein S11 [Syntrophothermus lipocalidus DSM 12680]
gi|297146194|gb|ADI02951.1| 30S ribosomal protein S11 [Syntrophothermus lipocalidus DSM 12680]
Length = 130
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +R++ +ERKNI G AH+ STFNNT +TITD GN I+W+S VGF GSRK++
Sbjct: 1 MARKTTTRVKRKERKNIDYGIAHIKSTFNNTIVTITDRQGNVISWASAGTVGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + A HG+ +E V G GAGR++A+R+L+A G + I DVT I HN
Sbjct: 61 PFAAQQAAENAAKAAMEHGVREVECYVKGPGAGREAAIRSLQAAGLDVSVIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|116749015|ref|YP_845702.1| 30S ribosomal protein S11 [Syntrophobacter fumaroxidans MPOB]
gi|152060828|sp|A0LIL5|RS11_SYNFM RecName: Full=30S ribosomal protein S11
gi|116698079|gb|ABK17267.1| SSU ribosomal protein S11P [Syntrophobacter fumaroxidans MPOB]
Length = 130
Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + +ERKNI++G AH+ STFNNT +TITD GN I+WSS GF GSRK++
Sbjct: 1 MAREKAASRKKKERKNILNGIAHIRSTFNNTIVTITDASGNAISWSSAGSQGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + + KA HG+ ++EV V G G+GR++ALRAL+A GF I I DVT I HN
Sbjct: 61 PFAAQVAAEIAAKKAMEHGVQNIEVYVKGPGSGREAALRALQAAGFNITVIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|11467767|ref|NP_050818.1| ribosomal protein S11 [Nephroselmis olivacea]
gi|48475009|sp|Q9TL27|RR11_NEPOL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|5880696|gb|AAD54789.1|AF137379_12 ribosomal protein S11 [Nephroselmis olivacea]
Length = 130
Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R+ R ++ + G H+ ++FNNT +TITD G +AWSS GF G++K +
Sbjct: 1 MARQSKRLAPRRLKRKVSKGVVHIQASFNNTIVTITDSSGGVLAWSSAGACGFRGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + + GM ++ V G G GR++A+RAL+ G + I D+T + HN
Sbjct: 61 PFAAQTAAETAIRQCIDQGMRQADIIVQGPGNGRETAIRALQLAGVGVSLIRDITSVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPPKQRRI 130
>gi|34501437|ref|NP_904224.1| ribosomal protein S11 [Physcomitrella patens subsp. patens]
gi|62287444|sp|Q6YXJ8|RR11_PHYPA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|34494807|dbj|BAC85074.1| ribosomal protein S11 [Physcomitrella patens subsp. patens]
Length = 130
Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +I + ++ I G H+ ++FNNT +T+TD G + WSS GF G++K++
Sbjct: 1 MAKLIKKISLRKGKRRIPKGVIHIQASFNNTIVTVTDIRGQVVFWSSAGACGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAENAIRVLIDQGMKQAEVMISGPGPGRDTALRAIRRSGVILNFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|91774659|ref|YP_544415.1| 30S ribosomal protein S11 [Methylobacillus flagellatus KT]
gi|253998039|ref|YP_003050102.1| 30S ribosomal protein S11 [Methylovorus sp. SIP3-4]
gi|313200104|ref|YP_004038762.1| 30S ribosomal protein S11 [Methylovorus sp. MP688]
gi|123078969|sp|Q1H4L3|RS11_METFK RecName: Full=30S ribosomal protein S11
gi|91708646|gb|ABE48574.1| SSU ribosomal protein S11P [Methylobacillus flagellatus KT]
gi|253984718|gb|ACT49575.1| ribosomal protein S11 [Methylovorus sp. SIP3-4]
gi|312439420|gb|ADQ83526.1| ribosomal protein S11 [Methylovorus sp. MP688]
Length = 129
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ R+R + +KNI G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKANVRVRKKVKKNIAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ G+ +LEV++ G G GR+SA+RAL A+GF I SI DVT + HNG
Sbjct: 61 FAAQVAAEAAGKAAQECGVKNLEVRIKGPGPGRESAVRALNAVGFKITSISDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|219849862|ref|YP_002464295.1| 30S ribosomal protein S11 [Chloroflexus aggregans DSM 9485]
gi|219544121|gb|ACL25859.1| ribosomal protein S11 [Chloroflexus aggregans DSM 9485]
Length = 137
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R + RERKN+ G AH+ STFNNT +TITDP G + WSS GF GSRK++P+AAQV
Sbjct: 14 QRGKRRERKNVPRGYAHIQSTFNNTIVTITDPQGAVVCWSSAGQSGFKGSRKSTPYAAQV 73
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +GM S+EV V G GAGR++A+R+L+A G I +I DVT I HNGCRP K
Sbjct: 74 AAENAARKAMENGMRSVEVFVKGPGAGREAAIRSLQAAGLQITAITDVTPIPHNGCRPPK 133
Query: 126 RRRI 129
RRR+
Sbjct: 134 RRRV 137
>gi|196018040|ref|XP_002118718.1| hypothetical protein TRIADDRAFT_51242 [Trichoplax adhaerens]
gi|190578391|gb|EDV18797.1| hypothetical protein TRIADDRAFT_51242 [Trichoplax adhaerens]
Length = 122
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
E+KNIV+G AH+ +TFNNT +TITD G +AWSS GF GSRK++P+AAQV ++ +
Sbjct: 5 EKKNIVAGVAHISATFNNTIVTITDTQGAVVAWSSAGSNGFKGSRKSTPYAAQVTAENVA 64
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
K GM ++ VK+ G G GRDSA+R L + G + +I D+T I HNGCRP KRRR+
Sbjct: 65 KKVTEFGMKTISVKIQGPGTGRDSAVRGLISSGLNVTTIKDITPIPHNGCRPPKRRRV 122
>gi|84625022|ref|YP_452394.1| 30S ribosomal protein S11 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166710855|ref|ZP_02242062.1| 30S ribosomal protein S11 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|188575512|ref|YP_001912441.1| 30S ribosomal protein S11 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|123725499|sp|Q2P007|RS11_XANOM RecName: Full=30S ribosomal protein S11
gi|226708435|sp|B2SQT2|RS11_XANOP RecName: Full=30S ribosomal protein S11
gi|84368962|dbj|BAE70120.1| 30S ribosomal protein S11 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519964|gb|ACD57909.1| ribosomal protein S11 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 130
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + + ++ I G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPVEKKTKKKIKRVITDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|293402526|ref|ZP_06646661.1| 30S ribosomal protein S11 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304040|gb|EFE45294.1| 30S ribosomal protein S11 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 131
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 1 MPK--SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + + RKNI G AH+ STFNNT +TITD +GN +AWSS +GF GSRK+
Sbjct: 1 MAKNVKAGARKRKARKNIARGCAHIHSTFNNTIVTITDENGNAVAWSSAGALGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + A +GM ++ V V G G GR++A+RAL+ G I I DVT I H
Sbjct: 61 TPFAAQMAGEAAGKAAIENGMKTVSVNVKGPGPGREAAVRALQVAGLEITMINDVTPIPH 120
Query: 119 NGCRPRKRRR 128
NGCRP KR R
Sbjct: 121 NGCRPPKRPR 130
>gi|189460708|ref|ZP_03009493.1| hypothetical protein BACCOP_01355 [Bacteroides coprocola DSM 17136]
gi|224023643|ref|ZP_03642009.1| hypothetical protein BACCOPRO_00350 [Bacteroides coprophilus DSM
18228]
gi|189432667|gb|EDV01652.1| hypothetical protein BACCOP_01355 [Bacteroides coprocola DSM 17136]
gi|224016865|gb|EEF74877.1| hypothetical protein BACCOPRO_00350 [Bacteroides coprophilus DSM
18228]
Length = 129
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGLRKVKAYVKGPGNGRESAIRTVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|225016259|ref|ZP_03705451.1| hypothetical protein CLOSTMETH_00162 [Clostridium methylpentosum
DSM 5476]
gi|224950934|gb|EEG32143.1| hypothetical protein CLOSTMETH_00162 [Clostridium methylpentosum
DSM 5476]
Length = 132
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ + R RERKNI G H+ STFNNT +TITD GN ++W+S +GF GSRK
Sbjct: 1 MAKTAKKTTVRRRRERKNIEKGSVHIQSTFNNTIVTITDTQGNALSWASAGGLGFRGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ A + + A HG+ S+EV V G G+GR++A+RAL++ G + I DVT I
Sbjct: 61 STPFAAQTAAETAAKAAMEHGLKSVEVFVKGPGSGREAAIRALQSAGLEVSMIKDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|160947674|ref|ZP_02094841.1| hypothetical protein PEPMIC_01609 [Parvimonas micra ATCC 33270]
gi|158446808|gb|EDP23803.1| hypothetical protein PEPMIC_01609 [Parvimonas micra ATCC 33270]
Length = 131
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
Query: 1 MP--KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R++ RERKNI G+AH+VS+FNNT +T++D +GN I+W+S +GF GSRK+
Sbjct: 1 MAIKKQKARVKRRERKNIEKGQAHIVSSFNNTMVTLSDLNGNVISWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A ++ + KA HG+ +EV V G G+GR++A+R+L+A G + I DVT I H
Sbjct: 61 TPFAAQQAAEEAAKKAMEHGLKVVEVYVKGPGSGREAAIRSLQATGLEVSLIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|320538143|ref|ZP_08038038.1| 30S ribosomal protein S11 [Treponema phagedenis F0421]
gi|320144960|gb|EFW36681.1| 30S ribosomal protein S11 [Treponema phagedenis F0421]
Length = 126
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 83/121 (68%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E+K++ G ++ +TFNNT ITITD GN ++W+S +GF+G++K++PFAAQ +
Sbjct: 6 KRKEKKSVYEGNVYIQATFNNTIITITDLKGNALSWASSGGLGFNGAKKSTPFAAQTVAE 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KAQ +G+ + V V G G GR+SA+R L +G + SI DVT I HNGCRPRK RR
Sbjct: 66 TAIQKAQQYGLREVHVFVKGPGVGRESAIRTLGVMGLKVRSISDVTPIPHNGCRPRKTRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|269792767|ref|YP_003317671.1| 30S ribosomal protein S11 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100402|gb|ACZ19389.1| ribosomal protein S11 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 130
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKS-PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + ++RK++ G AH+ STFNNT +T+TD GN ++W+S VGF G+RK++
Sbjct: 1 MAKRVQRRSKRKDRKHVSYGVAHIYSTFNNTIVTLTDKQGNALSWASGGNVGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ++ + AQ +G++ ++V V G G GR+SA+R+L+A G + I D T I HN
Sbjct: 61 PYAAQMSAAQAAKLAQEYGVTEIDVVVKGPGPGRESAIRSLQAAGLQVNQIKDATPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|167764348|ref|ZP_02436473.1| hypothetical protein BACSTE_02732 [Bacteroides stercoris ATCC
43183]
gi|167697753|gb|EDS14332.1| hypothetical protein BACSTE_02732 [Bacteroides stercoris ATCC
43183]
Length = 129
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|27904919|ref|NP_778045.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29611840|sp|P59484|RS11_BUCBP RecName: Full=30S ribosomal protein S11
gi|27904317|gb|AAO27150.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R++ R +K I+ G AH+ ++FNNT I+I+D GN + W++ GF GSRK++P
Sbjct: 1 MVKELIRVKKRVKKQILDGIAHIHASFNNTIISISDKKGNVLGWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ +++G+ +LEV V G G GR+S++R L IGF I++I DVT I HNG
Sbjct: 61 FAAQVAVERCADIVKSYGIKNLEVMVKGPGPGRESSIRTLNTIGFRIINITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CR K+RR+
Sbjct: 121 CRSPKKRRV 129
>gi|116667420|pdb|2GY9|K Chain K, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667472|pdb|2GYB|K Chain K, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
Length = 116
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/116 (52%), Positives = 81/116 (69%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++PFAAQVA + C+
Sbjct: 1 RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCAD 60
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR
Sbjct: 61 AVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRR 116
>gi|89100322|ref|ZP_01173187.1| 30S ribosomal protein S11 [Bacillus sp. NRRL B-14911]
gi|89084943|gb|EAR64079.1| 30S ribosomal protein S11 [Bacillus sp. NRRL B-14911]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVTITDVHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSMEHGMKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|304438881|ref|ZP_07398804.1| 30S ribosomal protein S11 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372547|gb|EFM26130.1| 30S ribosomal protein S11 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 131
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/131 (52%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 1 MPKSP--SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +++R RERKNI G+AH+ S+FNNT +T+TD GN I+W+S +GF GSRK+
Sbjct: 1 MAKKQKVTKVRRRERKNIEKGQAHIASSFNNTMVTLTDMSGNVISWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + KA+ HG+ S+EV V G G+GR++A+R+L+A G + I DVT I H
Sbjct: 61 TPFAAQEAAQTAAEKAKEHGLKSVEVYVKGPGSGREAAIRSLQATGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|270340170|ref|ZP_06007284.2| 30S ribosomal protein S11 [Prevotella bergensis DSM 17361]
gi|270332364|gb|EFA43150.1| 30S ribosomal protein S11 [Prevotella bergensis DSM 17361]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+K++P
Sbjct: 1 MAKTKATSKKRNVRVDAMGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA +DC+ A G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQVAAEDCAKVAFGLGLRKVKAYVKGPGNGRESAIRAIHGAGIEVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|118602236|ref|YP_903451.1| 30S ribosomal protein S11 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|152060816|sp|A1AVM3|RS11_RUTMC RecName: Full=30S ribosomal protein S11
gi|118567175|gb|ABL01980.1| SSU ribosomal protein S11P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 127
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R + +K I+ G AH+ +TFNNT + ITD HGN I WS+ GF GSRK++P
Sbjct: 1 MAKTPTR--KKSKKVIIDGIAHIHATFNNTIVMITDRHGNAICWSASGGSGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQV C KA GM +LEV+V G G GRDSA+R L A G I SI DVT I HNG
Sbjct: 59 FAAQVTAGSCGEKALAFGMKNLEVRVKGPGPGRDSAIRGLNAQGLKIQSITDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPSKKRRV 127
>gi|227485500|ref|ZP_03915816.1| ribosomal protein S11 [Anaerococcus lactolyticus ATCC 51172]
gi|227236499|gb|EEI86514.1| ribosomal protein S11 [Anaerococcus lactolyticus ATCC 51172]
Length = 132
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 89/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K ++ R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK++PFA
Sbjct: 6 KKSTKGRRRVKKNVERGQAHISSTFNNTMVTLTDMQGNALSWASAGQLGFRGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A A + + A + G+ ++EV V G G+GR++A+R+L+A G + I DVT I HNGCR
Sbjct: 66 AGEAAETAAKIAIDQGLKTVEVYVKGPGSGREAAIRSLQAAGLEVTMIKDVTPIPHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|190572966|ref|YP_001970811.1| 30S ribosomal protein S11 [Stenotrophomonas maltophilia K279a]
gi|194364556|ref|YP_002027166.1| 30S ribosomal protein S11 [Stenotrophomonas maltophilia R551-3]
gi|254523559|ref|ZP_05135614.1| ribosomal protein S11 [Stenotrophomonas sp. SKA14]
gi|226708420|sp|B4SLH3|RS11_STRM5 RecName: Full=30S ribosomal protein S11
gi|226708421|sp|B2FQK6|RS11_STRMK RecName: Full=30S ribosomal protein S11
gi|190010888|emb|CAQ44497.1| putative 30S ribosomal protein S11 [Stenotrophomonas maltophilia
K279a]
gi|194347360|gb|ACF50483.1| ribosomal protein S11 [Stenotrophomonas maltophilia R551-3]
gi|219721150|gb|EED39675.1| ribosomal protein S11 [Stenotrophomonas sp. SKA14]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ + + ++ + G AHV ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPAAKTKKKIKRVVTDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HNG
Sbjct: 61 FAAQVAAEKAGRAALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|16801817|ref|NP_472085.1| 30S ribosomal protein S11 [Listeria innocua Clip11262]
gi|16804645|ref|NP_466130.1| 30S ribosomal protein S11 [Listeria monocytogenes EGD-e]
gi|46908779|ref|YP_015168.1| 30S ribosomal protein S11 [Listeria monocytogenes str. 4b F2365]
gi|47093973|ref|ZP_00231707.1| ribosomal protein S11 [Listeria monocytogenes str. 4b H7858]
gi|47097178|ref|ZP_00234743.1| ribosomal protein S11 [Listeria monocytogenes str. 1/2a F6854]
gi|116873973|ref|YP_850754.1| 30S ribosomal protein S11 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217966194|ref|YP_002351872.1| ribosomal protein S11 [Listeria monocytogenes HCC23]
gi|224499280|ref|ZP_03667629.1| 30S ribosomal protein S11 [Listeria monocytogenes Finland 1988]
gi|224503599|ref|ZP_03671906.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL R2-561]
gi|226225153|ref|YP_002759260.1| ribosomal protein S11 [Listeria monocytogenes Clip81459]
gi|254825032|ref|ZP_05230033.1| ribosomal protein S11 [Listeria monocytogenes FSL J1-194]
gi|254829056|ref|ZP_05233743.1| ribosomal protein S11 [Listeria monocytogenes FSL N3-165]
gi|254830962|ref|ZP_05235617.1| 30S ribosomal protein S11 [Listeria monocytogenes 10403S]
gi|254854188|ref|ZP_05243536.1| rpsK [Listeria monocytogenes FSL R2-503]
gi|254899942|ref|ZP_05259866.1| 30S ribosomal protein S11 [Listeria monocytogenes J0161]
gi|254912852|ref|ZP_05262864.1| 30S ribosomal protein S11 [Listeria monocytogenes J2818]
gi|254931123|ref|ZP_05264482.1| rpsK [Listeria monocytogenes HPB2262]
gi|254937232|ref|ZP_05268929.1| ribosomal protein S11 [Listeria monocytogenes F6900]
gi|254992727|ref|ZP_05274917.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL J2-064]
gi|255027532|ref|ZP_05299518.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL J2-003]
gi|255028408|ref|ZP_05300359.1| 30S ribosomal protein S11 [Listeria monocytogenes LO28]
gi|255520568|ref|ZP_05387805.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL J1-175]
gi|284800507|ref|YP_003412372.1| 30S ribosomal protein S11 [Listeria monocytogenes 08-5578]
gi|284993693|ref|YP_003415461.1| 30S ribosomal protein S11 [Listeria monocytogenes 08-5923]
gi|290891792|ref|ZP_06554789.1| ribosomal protein S11 [Listeria monocytogenes FSL J2-071]
gi|300763642|ref|ZP_07073640.1| ribosomal protein S11 [Listeria monocytogenes FSL N1-017]
gi|315283814|ref|ZP_07871883.1| 30S ribosomal protein S11 [Listeria marthii FSL S4-120]
gi|315304918|ref|ZP_07875022.1| 30S ribosomal protein S11 [Listeria ivanovii FSL F6-596]
gi|54039331|sp|P66353|RS11_LISIN RecName: Full=30S ribosomal protein S11
gi|54042108|sp|P66352|RS11_LISMO RecName: Full=30S ribosomal protein S11
gi|59798757|sp|Q71WH1|RS11_LISMF RecName: Full=30S ribosomal protein S11
gi|123461448|sp|A0ALU3|RS11_LISW6 RecName: Full=30S ribosomal protein S11
gi|254810702|sp|B8DB33|RS11_LISMH RecName: Full=30S ribosomal protein S11
gi|259494628|sp|C1KZF6|RS11_LISMC RecName: Full=30S ribosomal protein S11
gi|16412095|emb|CAD00685.1| ribosomal protein S11 [Listeria monocytogenes EGD-e]
gi|16415292|emb|CAC97982.1| ribosomal protein S11 [Listeria innocua Clip11262]
gi|46882052|gb|AAT05345.1| ribosomal protein S11 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014437|gb|EAL05405.1| ribosomal protein S11 [Listeria monocytogenes str. 1/2a F6854]
gi|47017634|gb|EAL08433.1| ribosomal protein S11 [Listeria monocytogenes str. 4b H7858]
gi|116742851|emb|CAK21975.1| ribosomal protein S11 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217335464|gb|ACK41258.1| ribosomal protein S11 [Listeria monocytogenes HCC23]
gi|225877615|emb|CAS06329.1| ribosomal protein S11 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258601465|gb|EEW14790.1| ribosomal protein S11 [Listeria monocytogenes FSL N3-165]
gi|258607580|gb|EEW20188.1| rpsK [Listeria monocytogenes FSL R2-503]
gi|258609837|gb|EEW22445.1| ribosomal protein S11 [Listeria monocytogenes F6900]
gi|284056069|gb|ADB67010.1| 30S ribosomal protein S11 [Listeria monocytogenes 08-5578]
gi|284059160|gb|ADB70099.1| 30S ribosomal protein S11 [Listeria monocytogenes 08-5923]
gi|290558386|gb|EFD91903.1| ribosomal protein S11 [Listeria monocytogenes FSL J2-071]
gi|293582671|gb|EFF94703.1| rpsK [Listeria monocytogenes HPB2262]
gi|293590850|gb|EFF99184.1| 30S ribosomal protein S11 [Listeria monocytogenes J2818]
gi|293594274|gb|EFG02035.1| ribosomal protein S11 [Listeria monocytogenes FSL J1-194]
gi|300515919|gb|EFK42968.1| ribosomal protein S11 [Listeria monocytogenes FSL N1-017]
gi|307572196|emb|CAR85375.1| rpsK [Listeria monocytogenes L99]
gi|313606574|gb|EFR83375.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL F2-208]
gi|313612541|gb|EFR86614.1| 30S ribosomal protein S11 [Listeria marthii FSL S4-120]
gi|313616943|gb|EFR89578.1| 30S ribosomal protein S11 [Listeria innocua FSL S4-378]
gi|313626709|gb|EFR95738.1| 30S ribosomal protein S11 [Listeria ivanovii FSL F6-596]
gi|328468091|gb|EGF39097.1| 30S ribosomal protein S11 [Listeria monocytogenes 1816]
gi|328469779|gb|EGF40696.1| 30S ribosomal protein S11 [Listeria monocytogenes 220]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAWSSAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|160888374|ref|ZP_02069377.1| hypothetical protein BACUNI_00787 [Bacteroides uniformis ATCC 8492]
gi|218131302|ref|ZP_03460106.1| hypothetical protein BACEGG_02913 [Bacteroides eggerthii DSM 20697]
gi|270294727|ref|ZP_06200928.1| 30S ribosomal protein S11 [Bacteroides sp. D20]
gi|317476332|ref|ZP_07935581.1| 30S ribosomal protein S11 [Bacteroides eggerthii 1_2_48FAA]
gi|317477727|ref|ZP_07936920.1| 30S ribosomal protein S11 [Bacteroides sp. 4_1_36]
gi|319900949|ref|YP_004160677.1| SSU ribosomal protein S11P [Bacteroides helcogenes P 36-108]
gi|329956727|ref|ZP_08297300.1| 30S ribosomal protein S11 [Bacteroides clarus YIT 12056]
gi|329962291|ref|ZP_08300297.1| 30S ribosomal protein S11 [Bacteroides fluxus YIT 12057]
gi|156862051|gb|EDO55482.1| hypothetical protein BACUNI_00787 [Bacteroides uniformis ATCC 8492]
gi|217986519|gb|EEC52855.1| hypothetical protein BACEGG_02913 [Bacteroides eggerthii DSM 20697]
gi|270273974|gb|EFA19835.1| 30S ribosomal protein S11 [Bacteroides sp. D20]
gi|316906072|gb|EFV27833.1| 30S ribosomal protein S11 [Bacteroides sp. 4_1_36]
gi|316907358|gb|EFV29063.1| 30S ribosomal protein S11 [Bacteroides eggerthii 1_2_48FAA]
gi|319415980|gb|ADV43091.1| SSU ribosomal protein S11P [Bacteroides helcogenes P 36-108]
gi|328524099|gb|EGF51175.1| 30S ribosomal protein S11 [Bacteroides clarus YIT 12056]
gi|328530399|gb|EGF57276.1| 30S ribosomal protein S11 [Bacteroides fluxus YIT 12057]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKIAYDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|319787903|ref|YP_004147378.1| 30S ribosomal protein S11 [Pseudoxanthomonas suwonensis 11-1]
gi|317466415|gb|ADV28147.1| 30S ribosomal protein S11 [Pseudoxanthomonas suwonensis 11-1]
Length = 130
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/116 (50%), Positives = 83/116 (71%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + G AHV ++FNNT +TITD GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 15 RVVTDGIAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKSTPFAAQVAAEKAGKA 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HNGCRP K+RR+
Sbjct: 75 ALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHNGCRPPKKRRV 130
>gi|282857337|ref|ZP_06266574.1| 30S ribosomal protein S11 [Pyramidobacter piscolens W5455]
gi|282584837|gb|EFB90168.1| 30S ribosomal protein S11 [Pyramidobacter piscolens W5455]
Length = 127
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M R +E+KNI G AH+ STFNNT ++ITD G +AW+S VGF G+RK++P
Sbjct: 1 MA--NRTQRKKEKKNISYGVAHIFSTFNNTIVSITDKGGALLAWASGGNVGFKGARKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA+ + AQ+HG+ ++V V G G GR+SA+RAL+A+G + SI D T I HNG
Sbjct: 59 FAAQVASQQAAKTAQDHGLREIDVVVKGPGPGRESAIRALQAVGLQVNSIRDETPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|160932174|ref|ZP_02079565.1| hypothetical protein CLOLEP_01009 [Clostridium leptum DSM 753]
gi|156868776|gb|EDO62148.1| hypothetical protein CLOLEP_01009 [Clostridium leptum DSM 753]
Length = 134
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/127 (55%), Positives = 89/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + R RERKNI G AH+ STFNNT +TITD GN ++W+S +GF GSRK++PFA
Sbjct: 8 KKTAVRRRRERKNIDRGAAHIQSTFNNTIVTITDTQGNAVSWASAGELGFRGSRKSTPFA 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + A HGM S+EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 68 AQTAAETAAKVAMEHGMKSVEVFVKGPGSGREAAIRALQAAGLEVSMIKDVTPIPHNGCR 127
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 128 PPKRRRV 134
>gi|89893243|ref|YP_516730.1| 30S ribosomal protein S11 [Desulfitobacterium hafniense Y51]
gi|219666516|ref|YP_002456951.1| 30S ribosomal protein S11 [Desulfitobacterium hafniense DCB-2]
gi|123397896|sp|Q250K6|RS11_DESHY RecName: Full=30S ribosomal protein S11
gi|254765381|sp|B8G1Z2|RS11_DESHD RecName: Full=30S ribosomal protein S11
gi|89332691|dbj|BAE82286.1| 30S ribosomal protein S11 [Desulfitobacterium hafniense Y51]
gi|219536776|gb|ACL18515.1| ribosomal protein S11 [Desulfitobacterium hafniense DCB-2]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + RERKNI +G AH+ STFNN+ +TITDP GN I+WSS +GF GSRK++P
Sbjct: 1 MARKVVRTKRRERKNIATGVAHIKSTFNNSMVTITDPKGNVISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + + A HG+ +E V G GAGR++A+RAL+A G + I DVT I HNG
Sbjct: 61 YAAQMAAETAAKAAMEHGLKEVECFVKGPGAGREAAIRALQAAGLEVNMIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|319654895|ref|ZP_08008970.1| ribosomal protein S11 [Bacillus sp. 2_A_57_CT2]
gi|317393458|gb|EFV74221.1| ribosomal protein S11 [Bacillus sp. 2_A_57_CT2]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI G AH+ STFNNT +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIEQGIAHIRSTFNNTIVTITDVHGNAVSWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +Q HGM SLEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSQEHGMKSLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|189501186|ref|YP_001960656.1| 30S ribosomal protein S11 [Chlorobium phaeobacteroides BS1]
gi|226708344|sp|B3EP36|RS11_CHLPB RecName: Full=30S ribosomal protein S11
gi|189496627|gb|ACE05175.1| ribosomal protein S11 [Chlorobium phaeobacteroides BS1]
Length = 127
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P
Sbjct: 1 MATTSR--KKKKVKVTPEGTVHIKASFNNVLVTITDMQGNTVSWSSAGKNGFKGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+A+Q+ ++ + +A + GM + V + G G+GRD+A+RAL+ G + SI D+T + HNG
Sbjct: 59 YASQITSESAAKEAYDLGMRYVHVFIKGPGSGRDAAIRALQGAGLEVRSIKDITPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|307266988|ref|ZP_07548504.1| 30S ribosomal protein S11 [Thermoanaerobacter wiegelii Rt8.B1]
gi|326390635|ref|ZP_08212190.1| 30S ribosomal protein S11 [Thermoanaerobacter ethanolicus JW 200]
gi|306917973|gb|EFN48231.1| 30S ribosomal protein S11 [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993313|gb|EGD51750.1| 30S ribosomal protein S11 [Thermoanaerobacter ethanolicus JW 200]
Length = 130
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R R RE+K++ G AH+ STFNNT +TITDP GNTI+W+S +GF GSRK++
Sbjct: 1 MAKRVKRAGRKREKKHVERGIAHIHSTFNNTIVTITDPAGNTISWASAGTIGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A +HGM +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PFAAQMAAESAAKAAMDHGMKTVDVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|198273979|ref|ZP_03206511.1| hypothetical protein BACPLE_00115 [Bacteroides plebeius DSM 17135]
gi|198273057|gb|EDY97326.1| hypothetical protein BACPLE_00115 [Bacteroides plebeius DSM 17135]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G IAWSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIIAWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGLRKVKAYVKGPGNGRESAIRTVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|167749412|ref|ZP_02421539.1| hypothetical protein EUBSIR_00366 [Eubacterium siraeum DSM 15702]
gi|167657584|gb|EDS01714.1| hypothetical protein EUBSIR_00366 [Eubacterium siraeum DSM 15702]
gi|291532116|emb|CBK97701.1| SSU ribosomal protein S11P [Eubacterium siraeum 70/3]
gi|291558144|emb|CBL35261.1| SSU ribosomal protein S11P [Eubacterium siraeum V10Sc8a]
Length = 134
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/127 (55%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K P R RERKNI +G AH+ STFNNT +TITD GNT++W+S +GF GSRK++PFA
Sbjct: 8 KKPVVRRRRERKNIENGSAHIQSTFNNTIVTITDLQGNTLSWASAGEMGFRGSRKSTPFA 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + A HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 68 AQTAAETAAKAAMEHGLKTVEVYVKGPGSGREAAIRALQAAGLEVRLIKDVTPIPHNGCR 127
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 128 PPKRRRV 134
>gi|254368644|ref|ZP_04984659.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
FSC022]
gi|157121552|gb|EDO65737.1| 30S ribosomal protein S11 [Francisella tularensis subsp. holarctica
FSC022]
Length = 129
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADMALEYGVKNVDVLVKGPGSGRDSAIRALNAKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|164686552|ref|ZP_02210580.1| hypothetical protein CLOBAR_00119 [Clostridium bartlettii DSM
16795]
gi|164604421|gb|EDQ97886.1| hypothetical protein CLOBAR_00119 [Clostridium bartlettii DSM
16795]
Length = 132
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/127 (55%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +R+R RERKNI G AH+ STFNNT +T+TD HGN I+W+S +GF GSRK++PFA
Sbjct: 6 KKATRVRRRERKNIDRGHAHIQSTFNNTIVTLTDVHGNAISWASSGQLGFKGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+Q+A + + A HG+ S+EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 66 SQMAAETAAKAAMEHGLKSVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|16329918|ref|NP_440646.1| 30S ribosomal protein S11 [Synechocystis sp. PCC 6803]
gi|2500440|sp|P73298|RS11_SYNY3 RecName: Full=30S ribosomal protein S11
gi|1652404|dbj|BAA17326.1| 30S ribosomal protein S11 [Synechocystis sp. PCC 6803]
Length = 130
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + +KN+ SG AH+ STFNNT +TI+D G+ I+W+S GF G++K +
Sbjct: 1 MARPTRKTGPKKAKKNVPSGVAHIQSTFNNTIVTISDIRGDVISWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ A D + +A GM LEV VSG GAGR++A+RAL+ G I I DVT I HN
Sbjct: 61 PYAAQTAADSAARRAMEQGMRQLEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|282858350|ref|ZP_06267530.1| 30S ribosomal protein S11 [Prevotella bivia JCVIHMP010]
gi|282588798|gb|EFB93923.1| 30S ribosomal protein S11 [Prevotella bivia JCVIHMP010]
Length = 129
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTATSKKRNVRVDAMGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAFDLGLRKVKAFVKGPGNGRESAIRAVNAAGIVVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|150003364|ref|YP_001298108.1| 30S ribosomal protein S11 [Bacteroides vulgatus ATCC 8482]
gi|212695281|ref|ZP_03303409.1| hypothetical protein BACDOR_04821 [Bacteroides dorei DSM 17855]
gi|237711699|ref|ZP_04542180.1| 30S ribosomal protein S11 [Bacteroides sp. 9_1_42FAA]
gi|237725860|ref|ZP_04556341.1| 30S ribosomal protein S11 [Bacteroides sp. D4]
gi|254881347|ref|ZP_05254057.1| 30S ribosomal protein S11 [Bacteroides sp. 4_3_47FAA]
gi|265753118|ref|ZP_06088687.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_33FAA]
gi|294777844|ref|ZP_06743288.1| 30S ribosomal protein S11 [Bacteroides vulgatus PC510]
gi|319640348|ref|ZP_07995073.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_40A]
gi|166231800|sp|A6KYH2|RS11_BACV8 RecName: Full=30S ribosomal protein S11
gi|149931788|gb|ABR38486.1| 30S ribosomal protein S11 [Bacteroides vulgatus ATCC 8482]
gi|212662191|gb|EEB22765.1| hypothetical protein BACDOR_04821 [Bacteroides dorei DSM 17855]
gi|229435668|gb|EEO45745.1| 30S ribosomal protein S11 [Bacteroides dorei 5_1_36/D4]
gi|229454394|gb|EEO60115.1| 30S ribosomal protein S11 [Bacteroides sp. 9_1_42FAA]
gi|254834140|gb|EET14449.1| 30S ribosomal protein S11 [Bacteroides sp. 4_3_47FAA]
gi|263236304|gb|EEZ21799.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_33FAA]
gi|294448298|gb|EFG16854.1| 30S ribosomal protein S11 [Bacteroides vulgatus PC510]
gi|317388123|gb|EFV68977.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_40A]
Length = 129
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAFDLGLRKVKAYVKGPGNGRESAIRTVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|330997340|ref|ZP_08321191.1| 30S ribosomal protein S11 [Paraprevotella xylaniphila YIT 11841]
gi|329570714|gb|EGG52430.1| 30S ribosomal protein S11 [Paraprevotella xylaniphila YIT 11841]
Length = 129
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 78/129 (60%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDAMGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|307543848|ref|YP_003896327.1| 30S ribosomal protein S11 [Halomonas elongata DSM 2581]
gi|307215872|emb|CBV41142.1| 30S ribosomal protein S11 [Halomonas elongata DSM 2581]
Length = 128
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +P R + +K +V AH+ ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MA-NPRSNRKKVKKQVVDAVAHIHASFNNTIITITDRQGNALSWATAGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA++ + A +G+ +++V V G G GR+SA+RAL A GF + SI D T I HNG
Sbjct: 60 FAAQVASERAATAAAEYGVKNVDVLVKGPGPGRESAVRALNAAGFRVQSITDATPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|116515236|ref|YP_802865.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285368|sp|Q057C7|RS11_BUCCC RecName: Full=30S ribosomal protein S11
gi|58384669|gb|AAW72684.1| 30S ribosomal protein S11 [Buchnera aphidicola (Cinara cedri)]
gi|116257090|gb|ABJ90772.1| 30S ribosomal protein S11 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 130
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ + R ++ I+ G AH+ ++FNNT +TITD GNT+ W++ GF GSRK++
Sbjct: 1 MSKKKLNQPKKRIKRQILDGIAHIHASFNNTIVTITDRKGNTLGWATSGGSGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + C+ + +++G+ +LEV + G G GR+S +RAL + GF I +I DVT I HN
Sbjct: 61 PFAAQVAAEKCADRVKDYGIKNLEVMIKGPGPGRESTIRALNSSGFRITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPSKKRRV 130
>gi|257067035|ref|YP_003153291.1| 30S ribosomal protein S11 [Anaerococcus prevotii DSM 20548]
gi|256798915|gb|ACV29570.1| ribosomal protein S11 [Anaerococcus prevotii DSM 20548]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKQKKTTSRRRRVKKNVERGQAHINSTFNNTMVTLTDMQGNALSWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAA A D + KA + G+ ++EV V G G+GR+SA+R+L+A G + I DVT I H
Sbjct: 61 TPFAASEAADVAAKKAIDQGLKTVEVYVKGPGSGRESAIRSLQAAGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|319938482|ref|ZP_08012876.1| 30S ribosomal protein S11 [Coprobacillus sp. 29_1]
gi|319806398|gb|EFW03065.1| 30S ribosomal protein S11 [Coprobacillus sp. 29_1]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/127 (52%), Positives = 90/127 (70%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+ +R + R +KNI G AHV STFNNT +T+TD HGN + WSS +GF GSRK++P+
Sbjct: 4 AKTNTRGKRRVKKNIAKGVAHVHSTFNNTIVTVTDEHGNVLTWSSAGALGFKGSRKSTPY 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + +HGM S+EV V G G GR++A+RAL+A G + +I DVT I HNGC
Sbjct: 64 AAQMAAEAAAKASMDHGMKSVEVCVKGPGPGREAAVRALQAAGLEVTAINDVTPIPHNGC 123
Query: 122 RPRKRRR 128
RP KR R
Sbjct: 124 RPPKRPR 130
>gi|313903125|ref|ZP_07836519.1| SSU ribosomal protein S11P [Thermaerobacter subterraneus DSM 13965]
gi|313466627|gb|EFR62147.1| SSU ribosomal protein S11P [Thermaerobacter subterraneus DSM 13965]
Length = 140
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+R+R ++RKN+ G AH+ STFNNT +TITD GN IA+ S GF+GS+K +P+AAQ+
Sbjct: 17 TRLRRKDRKNVERGIAHIRSTFNNTIVTITDLQGNAIAFGSGGTNGFTGSKKGTPYAAQL 76
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + +A HGM +EV V G G GR++A+R+L+A G + +I DVT I HNGCRP K
Sbjct: 77 AAEQAAREAMEHGMREVEVWVKGPGPGREAAIRSLQATGLEVTAIKDVTPIPHNGCRPPK 136
Query: 126 RRRI 129
RRR+
Sbjct: 137 RRRV 140
>gi|255659527|ref|ZP_05404936.1| 30S ribosomal protein S11 [Mitsuokella multacida DSM 20544]
gi|260848080|gb|EEX68087.1| 30S ribosomal protein S11 [Mitsuokella multacida DSM 20544]
Length = 130
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + + RKNI G AH+ STFNNT +T+TD GN ++W+S +GF GSRK++
Sbjct: 1 MAVKKAVRTKKKVRKNIEYGVAHISSTFNNTIVTLTDKSGNALSWASAGGLGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ +EV V G GAGR++A+R+L+A G + I DVT I HN
Sbjct: 61 PFAAQMAAETAAKAAMEHGLKQVEVYVKGPGAGREAAIRSLQATGLEVNMIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|220906742|ref|YP_002482053.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 7425]
gi|254765378|sp|B8HMS7|RS11_CYAP4 RecName: Full=30S ribosomal protein S11
gi|219863353|gb|ACL43692.1| ribosomal protein S11 [Cyanothece sp. PCC 7425]
Length = 132
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRIR---NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
MP+ P++ ++++N+ +G AH+ STFNNT +TI+D G I+W+S GF G++K
Sbjct: 1 MPQQPTKRTGGVRKQKRNVPNGVAHIQSTFNNTIVTISDVAGEVISWASAGSSGFKGAKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RAL+ G I I DVT I
Sbjct: 61 GTPFAAQTAAESAARRAIDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|153805981|ref|ZP_01958649.1| hypothetical protein BACCAC_00226 [Bacteroides caccae ATCC 43185]
gi|189465442|ref|ZP_03014227.1| hypothetical protein BACINT_01795 [Bacteroides intestinalis DSM
17393]
gi|149130658|gb|EDM21864.1| hypothetical protein BACCAC_00226 [Bacteroides caccae ATCC 43185]
gi|189437716|gb|EDV06701.1| hypothetical protein BACINT_01795 [Bacteroides intestinalis DSM
17393]
Length = 129
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|156743923|ref|YP_001434052.1| 30S ribosomal protein S11 [Roseiflexus castenholzii DSM 13941]
gi|189040430|sp|A7NR38|RS11_ROSCS RecName: Full=30S ribosomal protein S11
gi|156235251|gb|ABU60034.1| ribosomal protein S11 [Roseiflexus castenholzii DSM 13941]
Length = 138
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
R + RE+KN+ G+AH+ STFNNT +TITDP+GN + WSS GF GSRK++P+AA
Sbjct: 13 KRQRGKRREKKNVPRGQAHIQSTFNNTIVTITDPNGNVVCWSSAGQNGFKGSRKSTPYAA 72
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A ++ + KA +GM +EV V G GAGR++A+R+L+A G + +I DVT I HNGCRP
Sbjct: 73 QIAAENAARKAIENGMRQIEVFVKGPGAGREAAIRSLQAAGLQVTAITDVTPIPHNGCRP 132
Query: 124 RKRRRI 129
KRRR+
Sbjct: 133 PKRRRV 138
>gi|224537841|ref|ZP_03678380.1| hypothetical protein BACCELL_02728 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520527|gb|EEF89632.1| hypothetical protein BACCELL_02728 [Bacteroides cellulosilyticus
DSM 14838]
Length = 129
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKIAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|126697667|ref|YP_001086564.1| 30S ribosomal protein S11 [Clostridium difficile 630]
gi|254973758|ref|ZP_05270230.1| 30S ribosomal protein S11 [Clostridium difficile QCD-66c26]
gi|255091148|ref|ZP_05320626.1| 30S ribosomal protein S11 [Clostridium difficile CIP 107932]
gi|255099259|ref|ZP_05328236.1| 30S ribosomal protein S11 [Clostridium difficile QCD-63q42]
gi|255305042|ref|ZP_05349214.1| 30S ribosomal protein S11 [Clostridium difficile ATCC 43255]
gi|255312802|ref|ZP_05354385.1| 30S ribosomal protein S11 [Clostridium difficile QCD-76w55]
gi|255515561|ref|ZP_05383237.1| 30S ribosomal protein S11 [Clostridium difficile QCD-97b34]
gi|255648656|ref|ZP_05395558.1| 30S ribosomal protein S11 [Clostridium difficile QCD-37x79]
gi|255654189|ref|ZP_05399598.1| 30S ribosomal protein S11 [Clostridium difficile QCD-23m63]
gi|260681873|ref|YP_003213158.1| 30S ribosomal protein S11 [Clostridium difficile CD196]
gi|260685471|ref|YP_003216604.1| 30S ribosomal protein S11 [Clostridium difficile R20291]
gi|296449772|ref|ZP_06891541.1| 30S ribosomal protein S11 [Clostridium difficile NAP08]
gi|296877836|ref|ZP_06901858.1| 30S ribosomal protein S11 [Clostridium difficile NAP07]
gi|306518779|ref|ZP_07405126.1| 30S ribosomal protein S11 [Clostridium difficile QCD-32g58]
gi|122974221|sp|Q18CI7|RS11_CLOD6 RecName: Full=30S ribosomal protein S11
gi|115249104|emb|CAJ66915.1| 30S ribosomal protein S11 [Clostridium difficile]
gi|260208036|emb|CBA60235.1| 30S ribosomal protein S11 [Clostridium difficile CD196]
gi|260211487|emb|CBE01625.1| 30S ribosomal protein S11 [Clostridium difficile R20291]
gi|296261370|gb|EFH08196.1| 30S ribosomal protein S11 [Clostridium difficile NAP08]
gi|296431136|gb|EFH16961.1| 30S ribosomal protein S11 [Clostridium difficile NAP07]
Length = 132
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 72/127 (56%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +RIR RERKNI G AH+ STFNNT IT+TD HGN I+W+S +GF GSRK++PFA
Sbjct: 6 KKVTRIRRRERKNIERGHAHIQSTFNNTIITLTDVHGNAISWASSGQLGFKGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+Q+A + + A HG+ S+EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 66 SQMAAETAAKAAMEHGLKSVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|20808634|ref|NP_623805.1| 30S ribosomal protein S11 [Thermoanaerobacter tengcongensis MB4]
gi|46397718|sp|Q8R7Y0|RS11_THETN RecName: Full=30S ribosomal protein S11
gi|20517268|gb|AAM25409.1| Ribosomal protein S11 [Thermoanaerobacter tengcongensis MB4]
Length = 130
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R R RE+K++ G AH+ STFNNT +TITDP GNTIAW+S VGF GSRK++
Sbjct: 1 MAKRVKRAGRKREKKHVERGIAHIHSTFNNTIVTITDPAGNTIAWASAGTVGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A +HGM +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PFAAQMAAESAAKAAMDHGMRTVDVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|296534010|ref|ZP_06896526.1| 30S ribosomal protein S11 [Roseomonas cervicalis ATCC 49957]
gi|296265676|gb|EFH11785.1| 30S ribosomal protein S11 [Roseomonas cervicalis ATCC 49957]
Length = 110
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/109 (63%), Positives = 87/109 (79%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
AHV+++FNNT +TITD GN IAWSS GF GSRK++P+AAQVA +D KA+ HGM
Sbjct: 2 AHVLASFNNTIVTITDSQGNAIAWSSAGSQGFKGSRKSTPYAAQVAAEDAGRKAREHGME 61
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+LE+ VSG G+GR+SALRAL+A+GF + +I DVT I HNGCRPRKRRR+
Sbjct: 62 TLEIMVSGPGSGRESALRALQAVGFYVTAIKDVTPIPHNGCRPRKRRRV 110
>gi|285017342|ref|YP_003375053.1| 30s ribosomal protein s11 [Xanthomonas albilineans GPE PC73]
gi|283472560|emb|CBA15065.1| probable 30s ribosomal protein s11 [Xanthomonas albilineans]
Length = 130
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/116 (50%), Positives = 83/116 (71%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + G AHV ++FNNT +TITD GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 15 RVVTDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKSTPFAAQVAAEKAGRA 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HNGCRP K+RR+
Sbjct: 75 ALDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHNGCRPPKKRRV 130
>gi|317050553|ref|YP_004111669.1| 30S ribosomal protein S11 [Desulfurispirillum indicum S5]
gi|316945637|gb|ADU65113.1| 30S ribosomal protein S11 [Desulfurispirillum indicum S5]
Length = 127
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R R RE+KN+ G H+ ++FNNT ITITDP GN ++W+S GF GS+K++P
Sbjct: 1 MAKP--RTRKREKKNVPKGVVHIKASFNNTLITITDPQGNAVSWNSAGSQGFKGSKKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA D + A +HGM +EV+V G G+GR+S++RAL+A G I+SI DVT I HNG
Sbjct: 59 FAAQVAADVAAKAAVDHGMKEVEVEVRGPGSGRESSIRALQAAGLRILSIKDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|163847948|ref|YP_001635992.1| 30S ribosomal protein S11 [Chloroflexus aurantiacus J-10-fl]
gi|222525828|ref|YP_002570299.1| 30S ribosomal protein S11 [Chloroflexus sp. Y-400-fl]
gi|163669237|gb|ABY35603.1| ribosomal protein S11 [Chloroflexus aurantiacus J-10-fl]
gi|222449707|gb|ACM53973.1| ribosomal protein S11 [Chloroflexus sp. Y-400-fl]
Length = 136
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/126 (54%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R + RERKN+ G+AH+ STFNNT +TITDP G + W+S GF GSRK++P+AA
Sbjct: 11 TRQRGKRRERKNVPRGQAHIQSTFNNTIVTITDPQGAVVCWASAGQSGFKGSRKSTPYAA 70
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QVA ++ + KA +GM S+EV V G GAGR++A+R+L+A G I +I DVT I HNGCRP
Sbjct: 71 QVAAENAARKAMENGMRSVEVFVKGPGAGREAAIRSLQAAGLQITAITDVTPIPHNGCRP 130
Query: 124 RKRRRI 129
KRRR+
Sbjct: 131 PKRRRV 136
>gi|56707501|ref|YP_169397.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669972|ref|YP_666529.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
FSC198]
gi|118496875|ref|YP_897925.1| 30S ribosomal protein S11 [Francisella tularensis subsp. novicida
U112]
gi|134302563|ref|YP_001122533.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|194324097|ref|ZP_03057871.1| ribosomal protein S11 [Francisella tularensis subsp. novicida FTE]
gi|208780323|ref|ZP_03247664.1| ribosomal protein S11 [Francisella novicida FTG]
gi|224456564|ref|ZP_03665037.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370810|ref|ZP_04986815.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254372232|ref|ZP_04987723.1| 30S ribosomal protein S11 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254373714|ref|ZP_04989197.1| 30S ribosomal protein S11 [Francisella novicida GA99-3548]
gi|254874321|ref|ZP_05247031.1| 30S ribosomal protein S11 rpsK [Francisella tularensis subsp.
tularensis MA00-2987]
gi|62287377|sp|Q5NHU5|RS11_FRATT RecName: Full=30S ribosomal protein S11
gi|123169578|sp|Q14J97|RS11_FRAT1 RecName: Full=30S ribosomal protein S11
gi|152060589|sp|A0Q4K6|RS11_FRATN RecName: Full=30S ribosomal protein S11
gi|152060590|sp|A4IZR1|RS11_FRATW RecName: Full=30S ribosomal protein S11
gi|54113151|gb|AAV29209.1| NT02FT0050 [synthetic construct]
gi|56603993|emb|CAG44981.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320305|emb|CAL08364.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
FSC198]
gi|118422781|gb|ABK89171.1| 30S ribosomal protein S11 [Francisella novicida U112]
gi|134050340|gb|ABO47411.1| ribosomal protein S11 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569053|gb|EDN34707.1| hypothetical protein FTBG_00624 [Francisella tularensis subsp.
tularensis FSC033]
gi|151569961|gb|EDN35615.1| 30S ribosomal protein S11 [Francisella novicida GA99-3549]
gi|151571435|gb|EDN37089.1| 30S ribosomal protein S11 [Francisella novicida GA99-3548]
gi|194321544|gb|EDX19028.1| ribosomal protein S11 [Francisella tularensis subsp. novicida FTE]
gi|208743691|gb|EDZ89994.1| ribosomal protein S11 [Francisella novicida FTG]
gi|254840320|gb|EET18756.1| 30S ribosomal protein S11 rpsK [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158645|gb|ADA78036.1| 30S ribosomal protein S11 [Francisella tularensis subsp. tularensis
NE061598]
gi|328676344|gb|AEB27214.1| SSU ribosomal protein S11p (S14e) [Francisella cf. novicida Fx1]
Length = 129
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADMALEYGVKNVDVLVKGPGSGRDSAVRALNAKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|210623213|ref|ZP_03293652.1| hypothetical protein CLOHIR_01602 [Clostridium hiranonis DSM 13275]
gi|210153750|gb|EEA84756.1| hypothetical protein CLOHIR_01602 [Clostridium hiranonis DSM 13275]
Length = 132
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +R+R +ERKNI G AH+ STFNNT +T+TD HGN I+W+S +GF GSRK +PFA
Sbjct: 6 KKVTRVRRKERKNIERGHAHIQSTFNNTIVTLTDVHGNAISWASSGQLGFKGSRKATPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+Q+A + + A HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 66 SQMAAETAAKAAMEHGLKTVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|262197164|ref|YP_003268373.1| 30S ribosomal protein S11 [Haliangium ochraceum DSM 14365]
gi|262080511|gb|ACY16480.1| 30S ribosomal protein S11 [Haliangium ochraceum DSM 14365]
Length = 129
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + + RKNI SG AH+ +TFNNT ++ITD GN ++WSS GF GSRK++P
Sbjct: 1 MAQPKRQTKKKVRKNIQSGIAHITATFNNTIVSITDVSGNVVSWSSSGSCGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A +D + KA +HGM ++ V V G GAGR+SALR L + GF I I DVT + HNG
Sbjct: 61 FAAQLAAEDAAKKAMDHGMRNIVVFVKGPGAGRESALRGLHSAGFKINLIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|261367776|ref|ZP_05980659.1| 30S ribosomal protein S11 [Subdoligranulum variabile DSM 15176]
gi|282570574|gb|EFB76109.1| 30S ribosomal protein S11 [Subdoligranulum variabile DSM 15176]
Length = 134
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/123 (55%), Positives = 88/123 (71%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
R + RERKNI +G AH+ STFNNT +TITD GNT++W S + F GSRK++P+AAQ A
Sbjct: 12 RTKKRERKNISAGAAHIQSTFNNTIVTITDTQGNTVSWCSTGALNFRGSRKSTPYAAQSA 71
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ + A HGM ++EV V G G+GR+SA+RAL+A G + I DVT I HNGCRP KR
Sbjct: 72 AEVAAKAAIEHGMKTVEVYVKGPGSGRESAIRALQATGLEVTMIRDVTPIPHNGCRPPKR 131
Query: 127 RRI 129
RR+
Sbjct: 132 RRV 134
>gi|212637980|ref|YP_002314500.1| 30S ribosomal protein S11 [Anoxybacillus flavithermus WK1]
gi|226708325|sp|B7GJ93|RS11_ANOFW RecName: Full=30S ribosomal protein S11
gi|212559460|gb|ACJ32515.1| Ribosomal protein S11 [Anoxybacillus flavithermus WK1]
Length = 129
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT +TITD HGN I+WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVTITDVHGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|29348112|ref|NP_811615.1| 30S ribosomal protein S11 [Bacteroides thetaiotaomicron VPI-5482]
gi|53715441|ref|YP_101433.1| 30S ribosomal protein S11 [Bacteroides fragilis YCH46]
gi|60683413|ref|YP_213557.1| 30S ribosomal protein S11 [Bacteroides fragilis NCTC 9343]
gi|160883040|ref|ZP_02064043.1| hypothetical protein BACOVA_01003 [Bacteroides ovatus ATCC 8483]
gi|237717424|ref|ZP_04547905.1| 30S ribosomal protein S11 [Bacteroides sp. D1]
gi|237718718|ref|ZP_04549199.1| 30S ribosomal protein S11 [Bacteroides sp. 2_2_4]
gi|253566695|ref|ZP_04844148.1| 30S ribosomal protein S11 [Bacteroides sp. 3_2_5]
gi|253569616|ref|ZP_04847026.1| 30S ribosomal protein S11 [Bacteroides sp. 1_1_6]
gi|255011671|ref|ZP_05283797.1| 30S ribosomal protein S11 [Bacteroides fragilis 3_1_12]
gi|255690028|ref|ZP_05413703.1| 30S ribosomal protein S11 [Bacteroides finegoldii DSM 17565]
gi|260175441|ref|ZP_05761853.1| 30S ribosomal protein S11 [Bacteroides sp. D2]
gi|262406189|ref|ZP_06082739.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_22]
gi|265767573|ref|ZP_06095239.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_16]
gi|293372095|ref|ZP_06618486.1| 30S ribosomal protein S11 [Bacteroides ovatus SD CMC 3f]
gi|294644082|ref|ZP_06721859.1| 30S ribosomal protein S11 [Bacteroides ovatus SD CC 2a]
gi|294806542|ref|ZP_06765381.1| 30S ribosomal protein S11 [Bacteroides xylanisolvens SD CC 1b]
gi|298483089|ref|ZP_07001270.1| 30S ribosomal protein S11 [Bacteroides sp. D22]
gi|299144599|ref|ZP_07037667.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_23]
gi|313149507|ref|ZP_07811700.1| 30S ribosomal protein S11 [Bacteroides fragilis 3_1_12]
gi|315923670|ref|ZP_07919910.1| 30S ribosomal protein S11 [Bacteroides sp. D2]
gi|32171621|sp|Q8A4A0|RS11_BACTN RecName: Full=30S ribosomal protein S11
gi|59798648|sp|Q64NN3|RS11_BACFR RecName: Full=30S ribosomal protein S11
gi|81313535|sp|Q5L8D4|RS11_BACFN RecName: Full=30S ribosomal protein S11
gi|29340015|gb|AAO77809.1| 30S ribosomal protein S11 [Bacteroides thetaiotaomicron VPI-5482]
gi|52218306|dbj|BAD50899.1| 30S ribosomal protein S11 [Bacteroides fragilis YCH46]
gi|60494847|emb|CAH09654.1| putative 30S ribosomal protein S11 [Bacteroides fragilis NCTC 9343]
gi|156111512|gb|EDO13257.1| hypothetical protein BACOVA_01003 [Bacteroides ovatus ATCC 8483]
gi|229443407|gb|EEO49198.1| 30S ribosomal protein S11 [Bacteroides sp. D1]
gi|229451850|gb|EEO57641.1| 30S ribosomal protein S11 [Bacteroides sp. 2_2_4]
gi|251841635|gb|EES69716.1| 30S ribosomal protein S11 [Bacteroides sp. 1_1_6]
gi|251944867|gb|EES85342.1| 30S ribosomal protein S11 [Bacteroides sp. 3_2_5]
gi|260624635|gb|EEX47506.1| 30S ribosomal protein S11 [Bacteroides finegoldii DSM 17565]
gi|262357064|gb|EEZ06154.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_22]
gi|263252878|gb|EEZ24390.1| 30S ribosomal protein S11 [Bacteroides sp. 2_1_16]
gi|292632887|gb|EFF51474.1| 30S ribosomal protein S11 [Bacteroides ovatus SD CMC 3f]
gi|292640606|gb|EFF58847.1| 30S ribosomal protein S11 [Bacteroides ovatus SD CC 2a]
gi|294446237|gb|EFG14865.1| 30S ribosomal protein S11 [Bacteroides xylanisolvens SD CC 1b]
gi|295085404|emb|CBK66927.1| SSU ribosomal protein S11P [Bacteroides xylanisolvens XB1A]
gi|298270833|gb|EFI12413.1| 30S ribosomal protein S11 [Bacteroides sp. D22]
gi|298515090|gb|EFI38971.1| 30S ribosomal protein S11 [Bacteroides sp. 3_1_23]
gi|301164898|emb|CBW24459.1| putative 30S ribosomal protein S11 [Bacteroides fragilis 638R]
gi|313138274|gb|EFR55634.1| 30S ribosomal protein S11 [Bacteroides fragilis 3_1_12]
gi|313697545|gb|EFS34380.1| 30S ribosomal protein S11 [Bacteroides sp. D2]
Length = 129
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVAAKKRNVKVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKIAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|121534658|ref|ZP_01666479.1| ribosomal protein S11 [Thermosinus carboxydivorans Nor1]
gi|121306678|gb|EAX47599.1| ribosomal protein S11 [Thermosinus carboxydivorans Nor1]
Length = 130
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + +ERKNI G AH+ STFNNT +TITD GN ++W+S +GF GSRK++
Sbjct: 1 MANKKVARPKRKERKNIEHGVAHIRSTFNNTIVTITDSKGNAVSWASAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HGM +EV V G GAGR++A+R+L+A G + I DVT I HN
Sbjct: 61 PFAAQMAAEQAAKAAMEHGMKQVEVYVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|108796841|ref|YP_636428.1| ribosomal protein S11 [Staurastrum punctulatum]
gi|91207762|sp|Q32RU8|RR11_STAPU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|61393609|gb|AAX45750.1| ribosomal protein S11 [Staurastrum punctulatum]
Length = 130
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +I + +K G HV ++FNNT +T+TD G T++WSS GF G++K++
Sbjct: 1 MARPSKKISLRKGKKRAPKGVIHVQASFNNTIVTVTDVRGQTMSWSSAGSCGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM EV +SG G GRD+ALRA++ G I + DVT + HN
Sbjct: 61 PFAAQTAAENAISLLIDQGMRQAEVMISGPGPGRDTALRAIKNSGLVISFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP +RR+
Sbjct: 121 GCRPSSQRRV 130
>gi|294674746|ref|YP_003575362.1| 30S ribosomal protein S11 [Prevotella ruminicola 23]
gi|294471840|gb|ADE81229.1| ribosomal protein S11 [Prevotella ruminicola 23]
Length = 129
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVTSKKRNVRVNAIGQLHVHSSFNNIIVSLANDEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G ++ I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKVAYDLGLRKVKAYVKGPGNGRESAIRAIHGAGIEVMEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|288803958|ref|ZP_06409381.1| 30S ribosomal protein S11 [Prevotella melaninogenica D18]
gi|288333591|gb|EFC72043.1| 30S ribosomal protein S11 [Prevotella melaninogenica D18]
Length = 129
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKSATSKKRNVRVDALGQLHVHSSFNNIIVSLANNEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A N G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCSKVAFNLGLRKVKAFVKGPGNGRESAIRAVNAAGIQVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|11466736|ref|NP_039332.1| ribosomal protein S11 [Marchantia polymorpha]
gi|133725|sp|P06364|RR11_MARPO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|11707|emb|CAA28118.1| rps11 [Marchantia polymorpha]
Length = 130
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPKS +I + ++ + G H+ ++FNNT +T+TD G ++WSS GF G++K++
Sbjct: 1 MPKSVKKINLRKGKRRLPKGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGTKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALRAIRRSGIILSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP ++RR+
Sbjct: 121 GCRPPRKRRV 130
>gi|307565145|ref|ZP_07627653.1| 30S ribosomal protein S11 [Prevotella amnii CRIS 21A-A]
gi|307346176|gb|EFN91505.1| 30S ribosomal protein S11 [Prevotella amnii CRIS 21A-A]
Length = 129
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTATSKKRSVRVDAMGQLHVHSSFNNIIVSLANNEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAAEDCAKAAFDLGLRKVKAFVKGPGNGRESAIRAVNAAGIIVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|254468658|ref|ZP_05082064.1| ribosomal protein S11 [beta proteobacterium KB13]
gi|207087468|gb|EDZ64751.1| ribosomal protein S11 [beta proteobacterium KB13]
Length = 129
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS +R++ + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSNTRVKKKIKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ +G+ ++EV++ G G GR+S++RAL +IG I +I DVT + HNG
Sbjct: 61 FAAQVAAEAAGKAAQEYGVKNVEVRIKGPGPGRESSVRALNSIGLKITAIQDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|311029076|ref|ZP_07707166.1| 30S ribosomal protein S11 [Bacillus sp. m3-13]
Length = 129
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI G AH+ STFNNT +TITD HGN I WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIEQGIAHIRSTFNNTIVTITDSHGNAIGWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKACMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|92112577|ref|YP_572505.1| 30S ribosomal protein S11 [Chromohalobacter salexigens DSM 3043]
gi|123084226|sp|Q1R0F2|RS11_CHRSD RecName: Full=30S ribosomal protein S11
gi|91795667|gb|ABE57806.1| SSU ribosomal protein S11P [Chromohalobacter salexigens DSM 3043]
Length = 128
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +P R + +K +V AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MA-NPRSNRKKVKKQVVDAVAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA++ + A +G+ +++V V G G GR+SA+RAL A GF + SI D T + HNG
Sbjct: 60 FAAQVASERAATAAAEYGVKNVDVLVKGPGPGRESAVRALNAAGFRVQSITDATPVPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 120 CRPPKKRRV 128
>gi|225175648|ref|ZP_03729642.1| ribosomal protein S11 [Dethiobacter alkaliphilus AHT 1]
gi|225168977|gb|EEG77777.1| ribosomal protein S11 [Dethiobacter alkaliphilus AHT 1]
Length = 131
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/118 (57%), Positives = 87/118 (73%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
ERKNI G AH+ STFNNT ITI+D GNTI+W+S VGF GSRK++PFAAQ+A D+ +
Sbjct: 14 ERKNIQHGVAHIFSTFNNTHITISDLQGNTISWASAGAVGFKGSRKSTPFAAQMAADNAA 73
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A HG+ +EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 74 KAAMEHGLKEVEVFVKGPGSGREAAIRSLQAAGLEVNLIKDVTPIPHNGCRPPKRRRV 131
>gi|310829558|ref|YP_003961915.1| 30S ribosomal protein S11 [Eubacterium limosum KIST612]
gi|308741292|gb|ADO38952.1| 30S ribosomal protein S11 [Eubacterium limosum KIST612]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKS-PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G+AH+ S+FNNT +TITD GN ++W+S +GF GSRK++
Sbjct: 1 MAKKVIRSKKRKIKKNIERGQAHIQSSFNNTIVTITDTAGNALSWASAGELGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ S+EV V G G+GR++A+RAL+A G I I DVT I HN
Sbjct: 61 PFAAQMAAEQAAKLAMEHGLKSVEVMVKGPGSGREAAIRALQAAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|312880345|ref|ZP_07740145.1| SSU ribosomal protein S11P [Aminomonas paucivorans DSM 12260]
gi|310783636|gb|EFQ24034.1| SSU ribosomal protein S11P [Aminomonas paucivorans DSM 12260]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKS-PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + +E+K+I G AHV STFNNT +T+TD GN ++W+S VGF G+RK++
Sbjct: 1 MAKRVQRRSKRKEKKHISYGVAHVYSTFNNTIVTLTDKQGNALSWASGGNVGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ++ + AQ+HG+ ++V V G G GR+SA+R+L+A G + I D T I HN
Sbjct: 61 PYAAQMSAAQAAKVAQDHGVVEIDVVVKGPGPGRESAIRSLQAAGLQVNLIKDATPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|152060818|sp|Q2S3P1|RS11_SALRD RecName: Full=30S ribosomal protein S11
Length = 134
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 62/134 (46%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIRNR--ERKNIV---SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M R R ++KN+V +GRA+V +TFNN +T+TD +GNTI+W+S +GF GS
Sbjct: 1 MADGDDRGGKRTPQKKNVVVESNGRAYVKATFNNVIVTLTDQYGNTISWASAGKMGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RKN+P+AAQ A + + +A G+ ++V V G G+GR+ A+RA+ G + SI DVT
Sbjct: 61 RKNTPYAAQKAGESAANEAYELGLRRVDVYVKGPGSGREGAIRAMSESGLEVASIRDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRR+
Sbjct: 121 LPHNGCRPPKRRRV 134
>gi|56751896|ref|YP_172597.1| 30S ribosomal protein S11 [Synechococcus elongatus PCC 6301]
gi|81301019|ref|YP_401227.1| 30S ribosomal protein S11 [Synechococcus elongatus PCC 7942]
gi|3122787|sp|O24709|RS11_SYNP6 RecName: Full=30S ribosomal protein S11
gi|123728135|sp|Q31L29|RS11_SYNE7 RecName: Full=30S ribosomal protein S11
gi|2446912|dbj|BAA22471.1| 30S ribosomal protein S11 [Synechococcus elongatus PCC 6301]
gi|56686855|dbj|BAD80077.1| 30S ribosomal protein S11 [Synechococcus elongatus PCC 6301]
gi|81169900|gb|ABB58240.1| SSU ribosomal protein S11P [Synechococcus elongatus PCC 7942]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + ++++N+ SG AH+ STFNNT ++I DP G I+W+S GF G++K +
Sbjct: 1 MARPTKKSGPRKQKRNVPSGVAHIQSTFNNTIVSIADPAGEVISWASAGSSGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM LEV VSG G+GR++A+RAL++ G I I DVT I HN
Sbjct: 61 PFAAQTAAEAAARRAIDQGMRQLEVMVSGPGSGRETAIRALQSAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|258646026|ref|ZP_05733495.1| 30S ribosomal protein S11 [Dialister invisus DSM 15470]
gi|260403398|gb|EEW96945.1| 30S ribosomal protein S11 [Dialister invisus DSM 15470]
Length = 129
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S+ + +ERK++ SG AH+ STFNNT +TITD +GNTIAW+S +GF GSRK++P
Sbjct: 1 MATVKSKAKRKERKHVESGAAHIRSTFNNTIVTITDSNGNTIAWASAGGLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM S +V V G GAGR++A+RAL+A G + SI DVT I HNG
Sbjct: 61 FAAQMAAEQAARAAIDQGMRSADVFVKGPGAGREAAIRALQAAGIEVSSIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|238928130|ref|ZP_04659890.1| ribosomal protein S11 [Selenomonas flueggei ATCC 43531]
gi|292669833|ref|ZP_06603259.1| 30S ribosomal protein S11 [Selenomonas noxia ATCC 43541]
gi|304438387|ref|ZP_07398328.1| 30S ribosomal protein S11 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|238884090|gb|EEQ47728.1| ribosomal protein S11 [Selenomonas flueggei ATCC 43531]
gi|292648630|gb|EFF66602.1| 30S ribosomal protein S11 [Selenomonas noxia ATCC 43541]
gi|304368753|gb|EFM22437.1| 30S ribosomal protein S11 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + + RKNI SG AH+ STFNNT +T+TD GN ++W+S +GF GSRK++
Sbjct: 1 MAVKKTTRSKKKVRKNIESGVAHISSTFNNTIVTLTDKSGNALSWASAGGLGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HN
Sbjct: 61 PFAAQMAAETAAKAAMEHGLKSVEVYVKGPGAGREAAIRSLQATGLEVNMIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|28202205|ref|NP_777446.1| ribosomal protein S11 [Anthoceros formosae]
gi|29337190|sp|P59381|RR11_ANTFO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|27807907|dbj|BAC55382.1| ribosomal protein S11 [Anthoceros formosae]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS +I + ++ I G H+ ++FNNT IT+TD G ++WSS GF G++K++
Sbjct: 1 MAKSIRKINLRKGKRRIPRGVTHIQASFNNTIITVTDVRGQVVSWSSAGACGFKGTKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALRA+R G + + DVT I HN
Sbjct: 61 PFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALRAIRRSGVVLSYVRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|169630851|ref|YP_001704500.1| 30S ribosomal protein S11 [Mycobacterium abscessus ATCC 19977]
gi|226708389|sp|B1MGA1|RS11_MYCA9 RecName: Full=30S ribosomal protein S11
gi|169242818|emb|CAM63846.1| 30S ribosomal protein S11 [Mycobacterium abscessus]
Length = 138
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R RE+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 11 PKKAQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVISWASSGHVGFKGSRKSTPF 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 71 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGC 130
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 131 RPPKRRRV 138
>gi|69216832|gb|AAZ03974.1| ribosomal protein S11 [Ginkgo biloba]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K RI R + I G H+ ++FNNT +T+TD G ++WSS GF G+++++
Sbjct: 1 MSKPTRRIGSRRNERRIPKGVIHIQASFNNTIVTVTDVRGQVVSWSSAGACGFKGTKRST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + GM EV +SG G GRD+ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAESAIRTLMDQGMERAEVMISGPGPGRDTALRAIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|4098575|gb|AAD00323.1| ribosomal protein S11 [Xanthomonas campestris pv. campestris]
Length = 130
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + + ++ I G AHV ++FNNT +TITD GN ++W++ GF GSRK++
Sbjct: 1 MAKPAEKKTKKKIKRVITDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + ++G+ SLEV++ G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAGLDYGVKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|271962662|ref|YP_003336858.1| 30S ribosomal protein S11 [Streptosporangium roseum DSM 43021]
gi|270505837|gb|ACZ84115.1| ribosomal protein S11 [Streptosporangium roseum DSM 43021]
Length = 134
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 95/126 (75%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+P ++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAA
Sbjct: 9 APKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A ++ + +A HGM ++V V G G+GR++A+R+L+A G + SI DVT + HNGCRP
Sbjct: 69 QMAAENAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPVPHNGCRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 PKRRRV 134
>gi|170077663|ref|YP_001734301.1| ribosomal protein S11 [Synechococcus sp. PCC 7002]
gi|169885332|gb|ACA99045.1| ribosomal protein S11 [Synechococcus sp. PCC 7002]
Length = 129
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +KNI +G AH+ STFNNT +TI+D G+ ++WSS GF G++K +P
Sbjct: 1 MARQKKGSPKKVKKNIPNGVAHIQSTFNNTIVTISDTKGDAVSWSSAGASGFKGAKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A D+ + +A GM +EV VSG GAGR++A+RAL+A G I I DVT I HNG
Sbjct: 61 FAAQTAADNAARRAMEQGMRQIEVMVSGPGAGRETAIRALQAAGLEITLIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|260909775|ref|ZP_05916469.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288929315|ref|ZP_06423160.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 317 str.
F0108]
gi|260636200|gb|EEX54196.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288329417|gb|EFC68003.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 317 str.
F0108]
Length = 128
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKIA-TKKRNVRVDALGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 60 YAAQMAAEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHGAGIEVTEIIDVTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|193211876|ref|YP_001997829.1| 30S ribosomal protein S11 [Chlorobaculum parvum NCIB 8327]
gi|226708343|sp|B3QR96|RS11_CHLP8 RecName: Full=30S ribosomal protein S11
gi|193085353|gb|ACF10629.1| ribosomal protein S11 [Chlorobaculum parvum NCIB 8327]
Length = 127
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P
Sbjct: 1 MATASR--KKKKVKVTPEGTVHIKASFNNIMVTITDTLGNTVSWSSAGKNGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+A+QV ++ + +A + GM ++V + G G+GRD+A+RAL+ +G + SI D+T + HNG
Sbjct: 59 YASQVTSEAAAKEAYDLGMRYVDVLIKGPGSGRDAAIRALQGVGLEVRSIRDITPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|205372043|ref|ZP_03224860.1| 30S ribosomal protein S11 (BS11) [Bacillus coahuilensis m4-4]
Length = 129
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +TITD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIEAGIAHIRSTFNNTIVTITDVHGNAVSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKTSMEHGMKTLEVTVKGPGAGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|169350820|ref|ZP_02867758.1| hypothetical protein CLOSPI_01594 [Clostridium spiroforme DSM 1552]
gi|169292406|gb|EDS74539.1| hypothetical protein CLOSPI_01594 [Clostridium spiroforme DSM 1552]
Length = 130
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + R +KNI G AHV STFNNT +TITD HGN + WSS +GF GSRK++
Sbjct: 1 MAKVKQVRGKKRVKKNIAKGVAHVHSTFNNTIVTITDEHGNVLTWSSAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A++ + + +HG+ S+EV V G G GR++A+RAL+A G + SI DVT I HN
Sbjct: 61 PFAAQMASEAAAKASMDHGVKSVEVCVKGPGPGREAAVRALQAAGLEVTSINDVTPIPHN 120
Query: 120 GCRPRKRRR 128
GCRP KR R
Sbjct: 121 GCRPPKRPR 129
>gi|300867112|ref|ZP_07111778.1| 30S ribosomal protein S11 [Oscillatoria sp. PCC 6506]
gi|300334867|emb|CBN56944.1| 30S ribosomal protein S11 [Oscillatoria sp. PCC 6506]
Length = 131
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + ++ ++++N+ +G+A + STFNNT +TITD +G I+W+S GF G++K
Sbjct: 1 MARQTTKKAGAKKQKRNVPNGQAFIQSTFNNTIVTITDLNGEVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RAL+ G I I DVT I H
Sbjct: 61 TPFAAQTAAESAARRANDQGMRQVEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|239825719|ref|YP_002948343.1| 30S ribosomal protein S11 [Geobacillus sp. WCH70]
gi|295401894|ref|ZP_06811857.1| 30S ribosomal protein S11 [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109287|ref|YP_003987603.1| 30S ribosomal protein S11 [Geobacillus sp. Y4.1MC1]
gi|259494625|sp|C5D3U3|RS11_GEOSW RecName: Full=30S ribosomal protein S11
gi|239806012|gb|ACS23077.1| ribosomal protein S11 [Geobacillus sp. WCH70]
gi|294976024|gb|EFG51639.1| 30S ribosomal protein S11 [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214388|gb|ADP72992.1| 30S ribosomal protein S11 [Geobacillus sp. Y4.1MC1]
Length = 129
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 73/129 (56%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R RKNI +G AH+ STFNNT +TITD HGNTIAWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVRKNIETGIAHIRSTFNNTIVTITDVHGNTIAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT I HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|21674973|ref|NP_663038.1| 30S ribosomal protein S11 [Chlorobium tepidum TLS]
gi|47606465|sp|Q8KAJ6|RS11_CHLTE RecName: Full=30S ribosomal protein S11
gi|21648205|gb|AAM73380.1| ribosomal protein S11 [Chlorobium tepidum TLS]
Length = 127
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P
Sbjct: 1 MATASR--KKKKVKVTPEGTVHIKASFNNVMVTITDTLGNTVSWSSAGKNGFKGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+A+QV ++ + +A + GM ++V + G G+GRD+A+RAL+ +G + SI D+T + HNG
Sbjct: 59 YASQVTSEAAAKEAYDLGMRYVDVLIKGPGSGRDAAIRALQGVGLEVRSIRDITPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|304315967|ref|YP_003851112.1| 30S ribosomal protein S11 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777469|gb|ADL68028.1| 30S ribosomal protein S11 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 130
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K RI + RERKN+ G AH+ STFNNT +T+TD GN +AWSS +GF GSRK++
Sbjct: 1 MAKKVKRIAKRRERKNVERGAAHIHSTFNNTIVTLTDMAGNALAWSSAGTLGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + + A HG+ +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PYAAQMAAETAAKAAMEHGLKTVDVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|217077308|ref|YP_002335026.1| 30S ribosomal protein S11 [Thermosipho africanus TCF52B]
gi|226708426|sp|B7IHX1|RS11_THEAB RecName: Full=30S ribosomal protein S11
gi|217037163|gb|ACJ75685.1| ribosomal protein S11 [Thermosipho africanus TCF52B]
Length = 129
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R+ R++K + G H+ ST+NNT IT+TDP G I W S GF G+RK +
Sbjct: 1 MAKKTRRVVKRKKKLTVDRGVVHIKSTYNNTIITLTDPDGKVITWGSGGTAGFQGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + +A GM +++ V G G+GR++A+R +A G I I DVT I N
Sbjct: 61 PYAAQLAADQVAKEAVKLGMKKVDILVKGPGSGREAAIRTFQAAGLEIGVIKDVTPIPFN 120
Query: 120 GCRPRKRR 127
GCRP+K+R
Sbjct: 121 GCRPKKKR 128
>gi|298372563|ref|ZP_06982553.1| 30S ribosomal protein S11 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275467|gb|EFI17018.1| 30S ribosomal protein S11 [Bacteroidetes oral taxon 274 str. F0058]
Length = 129
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 78/129 (60%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K +G HV S+FNN ++IT+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTVATKKRVVKVESTGELHVHSSFNNIIVSITNSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + GM + V G G GR+SA+R + G I I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKIAYDLGMRKAKAFVKGPGNGRESAIRTVHGAGIEITEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|229542178|ref|ZP_04431238.1| ribosomal protein S11 [Bacillus coagulans 36D1]
gi|229326598|gb|EEN92273.1| ribosomal protein S11 [Bacillus coagulans 36D1]
Length = 129
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 72/129 (55%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R RKNI SG AH+ STFNNT +TITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MARRTNTRKRRVRKNIESGVAHIRSTFNNTIVTITDVHGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM SLEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKASMEHGMKSLEVTVKGPGAGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|227501159|ref|ZP_03931208.1| ribosomal protein S11 [Anaerococcus tetradius ATCC 35098]
gi|227216744|gb|EEI82145.1| ribosomal protein S11 [Anaerococcus tetradius ATCC 35098]
Length = 131
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MAKTKKTTSRRRRVKKNVERGQAHINSTFNNTMVTLTDMQGNALSWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAA A D + KA + G+ ++EV V G G+GR+SA+R+L+A G + I DVT I H
Sbjct: 61 TPFAASEAADVAAKKAIDQGLKTVEVYVKGPGSGRESAIRSLQAAGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|325267153|ref|ZP_08133821.1| 30S ribosomal protein S11 [Kingella denitrificans ATCC 33394]
gi|324981391|gb|EGC17035.1| 30S ribosomal protein S11 [Kingella denitrificans ATCC 33394]
Length = 131
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK + G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LE ++ G G GR+S++RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAEAAGKVAQEYGVKNLEARIKGPGPGRESSIRALNALGFKITSITDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|228478001|ref|ZP_04062612.1| 30S ribosomal protein S11 [Streptococcus salivarius SK126]
gi|228250181|gb|EEK09434.1| 30S ribosomal protein S11 [Streptococcus salivarius SK126]
Length = 127
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAVAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|226939210|ref|YP_002794281.1| 30S ribosomal protein S11 [Laribacter hongkongensis HLHK9]
gi|254765388|sp|C1DAU1|RS11_LARHH RecName: Full=30S ribosomal protein S11
gi|226714134|gb|ACO73272.1| RpsK [Laribacter hongkongensis HLHK9]
Length = 130
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + R+R + +K++ G AHV ++FNNT ITITD GN ++W++ GF GSRK++
Sbjct: 1 MAKANTVRVRKKVKKSVSEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + AQ +G+ +LEV++ G G GRDS++RAL A+GF I SI DVT I HN
Sbjct: 61 PFAAQIAAEAAGKVAQEYGVKNLEVRIKGPGPGRDSSVRALNALGFKITSISDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPPKKRRI 130
>gi|288801123|ref|ZP_06406579.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332057|gb|EFC70539.1| 30S ribosomal protein S11 [Prevotella sp. oral taxon 299 str.
F0039]
Length = 129
Score = 159 bits (404), Expect = 7e-38, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKAATSKKRNVRVDAVGQLHVHSSFNNIIVSLANGEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHGSGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|329907622|ref|ZP_08274692.1| SSU ribosomal protein S11p (S14e) [Oxalobacteraceae bacterium
IMCC9480]
gi|327546927|gb|EGF31836.1| SSU ribosomal protein S11p (S14e) [Oxalobacteraceae bacterium
IMCC9480]
Length = 134
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 66/134 (49%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
Query: 1 MPKSP-----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K+P +R+R + +KN+ G AH+ ++FNNT ITITD GN ++W++ GF GS
Sbjct: 1 MAKAPNNAASARVRKKVKKNVAEGIAHIHASFNNTIITITDRQGNALSWATSGGAGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQVA + A G+ +LEV++ G G GR+SA+RAL +G I I DVT
Sbjct: 61 RKSTPFAAQVAAEAAGKIAVECGVKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRP KRRRI
Sbjct: 121 VPHNGCRPPKRRRI 134
>gi|282878782|ref|ZP_06287550.1| 30S ribosomal protein S11 [Prevotella buccalis ATCC 35310]
gi|281299173|gb|EFA91574.1| 30S ribosomal protein S11 [Prevotella buccalis ATCC 35310]
Length = 129
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTTASKKRNVRVDALGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ + V G G GR+SA+RA+ A G I I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKVAFDLGLRKVRAFVKGPGNGRESAIRAVHAAGIEITEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|325479124|gb|EGC82221.1| 30S ribosomal protein S11 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 131
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MP--KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K + R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK+
Sbjct: 1 MANKKKATSRRRRVKKNVERGQAHINSTFNNTMVTLTDMQGNALSWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAA A D + KA + G+ ++EV V G G+GR+SA+R+L+A G + I DVT I H
Sbjct: 61 TPFAASEAADVAAKKAIDQGLKTVEVYVKGPGSGRESAIRSLQAAGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|33866621|ref|NP_898180.1| 30S ribosomal protein S11 [Synechococcus sp. WH 8102]
gi|59798841|sp|Q7U4H8|RS11_SYNPX RecName: Full=30S ribosomal protein S11
gi|33633399|emb|CAE08604.1| 30S ribosomal protein S11 [Synechococcus sp. WH 8102]
Length = 130
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKTGPKKAKRNVPNGVAHIQSTFNNTIVSITDTSGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVKGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 [Neisseria meningitidis MC58]
gi|59802137|ref|YP_208849.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae FA 1090]
gi|121634040|ref|YP_974285.1| 30S ribosomal protein S11 [Neisseria meningitidis FAM18]
gi|161870896|ref|YP_001600071.1| 30S ribosomal protein S11 [Neisseria meningitidis 053442]
gi|218767144|ref|YP_002341656.1| 30S ribosomal protein S11 [Neisseria meningitidis Z2491]
gi|225076418|ref|ZP_03719617.1| hypothetical protein NEIFLAOT_01463 [Neisseria flavescens
NRL30031/H210]
gi|239997949|ref|ZP_04717873.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae 35/02]
gi|240015073|ref|ZP_04721986.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae DGI18]
gi|240017522|ref|ZP_04724062.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae FA6140]
gi|240081665|ref|ZP_04726208.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae FA19]
gi|240113943|ref|ZP_04728433.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae MS11]
gi|240116677|ref|ZP_04730739.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID18]
gi|240118899|ref|ZP_04732961.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID1]
gi|240122145|ref|ZP_04735107.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID24-1]
gi|240124437|ref|ZP_04737393.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID332]
gi|240124694|ref|ZP_04737580.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-92-679]
gi|240129113|ref|ZP_04741774.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-93-1035]
gi|241759606|ref|ZP_04757707.1| 30S ribosomal protein S11 [Neisseria flavescens SK114]
gi|254494698|ref|ZP_05107869.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae 1291]
gi|254805790|ref|YP_003084011.1| 30S ribosomal protein S11 [Neisseria meningitidis alpha14]
gi|255067435|ref|ZP_05319290.1| 30S ribosomal protein S11 [Neisseria sicca ATCC 29256]
gi|260439564|ref|ZP_05793380.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae DGI2]
gi|261364878|ref|ZP_05977761.1| 30S ribosomal protein S11 [Neisseria mucosa ATCC 25996]
gi|261378064|ref|ZP_05982637.1| 30S ribosomal protein S11 [Neisseria cinerea ATCC 14685]
gi|261380582|ref|ZP_05985155.1| 30S ribosomal protein S11 [Neisseria subflava NJ9703]
gi|268593799|ref|ZP_06127966.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae 35/02]
gi|268597762|ref|ZP_06131929.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae FA19]
gi|268600007|ref|ZP_06134174.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae MS11]
gi|268602344|ref|ZP_06136511.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID18]
gi|268604608|ref|ZP_06138775.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID1]
gi|268683065|ref|ZP_06149927.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID332]
gi|268683268|ref|ZP_06150130.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-92-679]
gi|268687495|ref|ZP_06154357.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-93-1035]
gi|291042800|ref|ZP_06568541.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae DGI2]
gi|293398179|ref|ZP_06642384.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae F62]
gi|294789217|ref|ZP_06754456.1| 30S ribosomal protein S11 [Simonsiella muelleri ATCC 29453]
gi|296313388|ref|ZP_06863329.1| 30S ribosomal protein S11 [Neisseria polysaccharea ATCC 43768]
gi|298370568|ref|ZP_06981883.1| 30S ribosomal protein S11 [Neisseria sp. oral taxon 014 str. F0314]
gi|313667464|ref|YP_004047748.1| 30S ribosomal protein S11 [Neisseria lactamica ST-640]
gi|319639572|ref|ZP_07994319.1| 30S ribosomal protein S11 [Neisseria mucosa C102]
gi|54039332|sp|P66355|RS11_NEIMB RecName: Full=30S ribosomal protein S11
gi|54042109|sp|P66354|RS11_NEIMA RecName: Full=30S ribosomal protein S11
gi|75355452|sp|Q5F5V0|RS11_NEIG1 RecName: Full=30S ribosomal protein S11
gi|152060800|sp|A1KRJ7|RS11_NEIMF RecName: Full=30S ribosomal protein S11
gi|189040423|sp|A9M3U2|RS11_NEIM0 RecName: Full=30S ribosomal protein S11
gi|7225384|gb|AAF40623.1| 30S ribosomal protein S11 [Neisseria meningitidis MC58]
gi|59719032|gb|AAW90437.1| putative 30S ribosomal protein S11 [Neisseria gonorrhoeae FA 1090]
gi|120865746|emb|CAM09475.1| 30S ribosomal protein S11 [Neisseria meningitidis FAM18]
gi|121051152|emb|CAM07423.1| 30S ribosomal protein S11 [Neisseria meningitidis Z2491]
gi|161596449|gb|ABX74109.1| 30S ribosomal protein S11 [Neisseria meningitidis 053442]
gi|224952266|gb|EEG33475.1| hypothetical protein NEIFLAOT_01463 [Neisseria flavescens
NRL30031/H210]
gi|226513738|gb|EEH63083.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae 1291]
gi|241319978|gb|EER56359.1| 30S ribosomal protein S11 [Neisseria flavescens SK114]
gi|254669332|emb|CBA08375.1| 30S ribosomal protein S11 [Neisseria meningitidis alpha14]
gi|254670761|emb|CBA07033.1| 30S ribosomal protein S11 [Neisseria meningitidis alpha153]
gi|254672691|emb|CBA06585.1| 30S ribosomal protein S11 [Neisseria meningitidis alpha275]
gi|255048230|gb|EET43694.1| 30S ribosomal protein S11 [Neisseria sicca ATCC 29256]
gi|261391702|emb|CAX49151.1| 30S ribosomal protein S11 [Neisseria meningitidis 8013]
gi|268547188|gb|EEZ42606.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae 35/02]
gi|268551550|gb|EEZ46569.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae FA19]
gi|268584138|gb|EEZ48814.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae MS11]
gi|268586475|gb|EEZ51151.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID18]
gi|268588739|gb|EEZ53415.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID1]
gi|268623349|gb|EEZ55749.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae PID332]
gi|268623552|gb|EEZ55952.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-92-679]
gi|268627779|gb|EEZ60179.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae SK-93-1035]
gi|269145514|gb|EEZ71932.1| 30S ribosomal protein S11 [Neisseria cinerea ATCC 14685]
gi|284796550|gb|EFC51897.1| 30S ribosomal protein S11 [Neisseria subflava NJ9703]
gi|288566926|gb|EFC88486.1| 30S ribosomal protein S11 [Neisseria mucosa ATCC 25996]
gi|291013234|gb|EFE05200.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae DGI2]
gi|291611442|gb|EFF40512.1| 30S ribosomal protein S11 [Neisseria gonorrhoeae F62]
gi|294482958|gb|EFG30646.1| 30S ribosomal protein S11 [Simonsiella muelleri ATCC 29453]
gi|296840098|gb|EFH24036.1| 30S ribosomal protein S11 [Neisseria polysaccharea ATCC 43768]
gi|298281178|gb|EFI22668.1| 30S ribosomal protein S11 [Neisseria sp. oral taxon 014 str. F0314]
gi|308388382|gb|ADO30702.1| 30S ribosomal protein S11 [Neisseria meningitidis alpha710]
gi|309379136|emb|CBX22267.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313004926|emb|CBN86352.1| 30S ribosomal protein S11 [Neisseria lactamica 020-06]
gi|317399143|gb|EFV79817.1| 30S ribosomal protein S11 [Neisseria mucosa C102]
gi|319411350|emb|CBY91761.1| 30S ribosomal protein S11 [Neisseria meningitidis WUE 2594]
gi|325129085|gb|EGC51934.1| ribosomal protein S11 [Neisseria meningitidis N1568]
gi|325131056|gb|EGC53780.1| ribosomal protein S11 [Neisseria meningitidis OX99.30304]
gi|325133078|gb|EGC55750.1| ribosomal protein S11 [Neisseria meningitidis M6190]
gi|325135172|gb|EGC57798.1| ribosomal protein S11 [Neisseria meningitidis M13399]
gi|325137224|gb|EGC59819.1| ribosomal protein S11 [Neisseria meningitidis M0579]
gi|325139056|gb|EGC61602.1| ribosomal protein S11 [Neisseria meningitidis ES14902]
gi|325141179|gb|EGC63679.1| ribosomal protein S11 [Neisseria meningitidis CU385]
gi|325143256|gb|EGC65595.1| ribosomal protein S11 [Neisseria meningitidis 961-5945]
gi|325145363|gb|EGC67640.1| ribosomal protein S11 [Neisseria meningitidis M01-240013]
gi|325197453|gb|ADY92909.1| ribosomal protein S11 [Neisseria meningitidis G2136]
gi|325199379|gb|ADY94834.1| ribosomal protein S11 [Neisseria meningitidis H44/76]
gi|325202999|gb|ADY98453.1| ribosomal protein S11 [Neisseria meningitidis M01-240149]
gi|325203286|gb|ADY98739.1| ribosomal protein S11 [Neisseria meningitidis M01-240355]
gi|325205259|gb|ADZ00712.1| ribosomal protein S11 [Neisseria meningitidis M04-240196]
gi|325207203|gb|ADZ02655.1| hypothetical protein NMBNZ0533_0170 [Neisseria meningitidis
NZ-05/33]
Length = 131
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK + G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+S++RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|15837776|ref|NP_298464.1| 30S ribosomal protein S11 [Xylella fastidiosa 9a5c]
gi|48474998|sp|Q9PE54|RS11_XYLFA RecName: Full=30S ribosomal protein S11
gi|9106140|gb|AAF83984.1|AE003951_9 30S ribosomal protein S11 [Xylella fastidiosa 9a5c]
Length = 130
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNI-VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ K + G AH+ ++FNNT +TITD GN++ W + GF GSRK +
Sbjct: 1 MAKQSVVKIKKKVKRVITDGVAHISASFNNTIVTITDRQGNSLFWCTSGASGFRGSRKCT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQVA + ++GM SLEV+++G G GR+SA+R+L +G+ I +I DVT I HN
Sbjct: 61 PFAAQVAAEKAGRAVLDYGMKSLEVRINGPGPGRESAVRSLNNVGYKITNIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|313895382|ref|ZP_07828939.1| 30S ribosomal protein S11 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320529821|ref|ZP_08030898.1| 30S ribosomal protein S11 [Selenomonas artemidis F0399]
gi|312976277|gb|EFR41735.1| 30S ribosomal protein S11 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320137839|gb|EFW29744.1| 30S ribosomal protein S11 [Selenomonas artemidis F0399]
Length = 130
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + + RKNI SG AH+ STFNNT +T+TD GN ++W+S +GF GSRK++
Sbjct: 1 MAVKKTTRSKKKVRKNIESGVAHISSTFNNTIVTLTDKSGNALSWASAGGLGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HN
Sbjct: 61 PFAAQMAAETAAKAAMEHGLKSVEVFVKGPGAGREAAIRSLQATGLEVNMIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|257456915|ref|ZP_05622096.1| 30S ribosomal protein S11 [Treponema vincentii ATCC 35580]
gi|257445624|gb|EEV20686.1| 30S ribosomal protein S11 [Treponema vincentii ATCC 35580]
Length = 127
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +E+K++ G ++ +TFNNT ITITD GN ++W+S +GF+G++K++P
Sbjct: 1 MATTAK--KRKEKKSVYEGNVYIQATFNNTIITITDLKGNALSWASSGGLGFNGAKKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ + + Q +G+ + V V G G GR+SA+R L +G + SI DVT I HNG
Sbjct: 59 FAAQTVAETAVQRVQQYGLREVHVFVKGPGVGRESAIRTLGVMGLKVRSINDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRPRK RRI
Sbjct: 119 CRPRKTRRI 127
>gi|302877825|ref|YP_003846389.1| 30S ribosomal protein S11 [Gallionella capsiferriformans ES-2]
gi|302580614|gb|ADL54625.1| 30S ribosomal protein S11 [Gallionella capsiferriformans ES-2]
Length = 129
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +++R + +KN+V G AHV ++FNNT +TITD GN +AWS+ GF GSRK++P
Sbjct: 1 MAKPSTKVRKKVKKNVVEGIAHVHASFNNTIVTITDRQGNALAWSTSGANGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + A G+ ++EV++ G G GR+S +RAL A GF I SI D+T + HNG
Sbjct: 61 FAAQVAAEVVGKSAAECGVKNIEVRIKGPGPGRESTVRALNAAGFKITSISDITPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|323706477|ref|ZP_08118038.1| 30S ribosomal protein S11 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534197|gb|EGB23987.1| 30S ribosomal protein S11 [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 130
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + RERKN+ G AH+ STFNNT +T+TD GN +AWSS +GF GSRK++
Sbjct: 1 MAKKVKRTAKRRERKNVERGAAHIHSTFNNTIVTLTDMAGNALAWSSAGTLGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + + A HG+ +++V V G GAGR++A+RAL+A G + I DVT I HN
Sbjct: 61 PYAAQMAAETAAKAAMEHGLKTVDVFVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|42526302|ref|NP_971400.1| 30S ribosomal protein S11 [Treponema denticola ATCC 35405]
gi|59798794|sp|Q73PK9|RS11_TREDE RecName: Full=30S ribosomal protein S11
gi|41816414|gb|AAS11281.1| ribosomal protein S11 [Treponema denticola ATCC 35405]
gi|325473245|gb|EGC76440.1| 30S ribosomal protein S11 [Treponema denticola F0402]
Length = 126
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 82/121 (67%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E+K+I G ++ +TFNNT ITITD GN ++W+S +GF+G++K++PFAAQ +
Sbjct: 6 KRKEKKSIYEGNVYIQATFNNTIITITDLKGNVLSWASSGGLGFAGAKKSTPFAAQTVAE 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
K Q +G+ + V V G G GR+SA+R L +G + SI DVT I HNGCRP+K RR
Sbjct: 66 TAVQKCQPYGLHEVHVFVKGPGVGRESAIRTLGTMGLKVRSISDVTPIPHNGCRPKKTRR 125
Query: 129 I 129
I
Sbjct: 126 I 126
>gi|29374876|ref|NP_814029.1| 30S ribosomal protein S11 [Enterococcus faecalis V583]
gi|227520017|ref|ZP_03950066.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0104]
gi|227555878|ref|ZP_03985925.1| 30S ribosomal protein S11 [Enterococcus faecalis HH22]
gi|229546939|ref|ZP_04435664.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1322]
gi|229550528|ref|ZP_04439253.1| 30S ribosomal protein S11 [Enterococcus faecalis ATCC 29200]
gi|255971734|ref|ZP_05422320.1| ribosomal protein S11 [Enterococcus faecalis T1]
gi|255974734|ref|ZP_05425320.1| ribosomal protein S11 [Enterococcus faecalis T2]
gi|256618355|ref|ZP_05475201.1| ribosomal protein S11 [Enterococcus faecalis ATCC 4200]
gi|256762029|ref|ZP_05502609.1| ribosomal protein S11 [Enterococcus faecalis T3]
gi|256855188|ref|ZP_05560549.1| ribosomal protein S11 [Enterococcus faecalis T8]
gi|256956837|ref|ZP_05561008.1| ribosomal protein S11 [Enterococcus faecalis DS5]
gi|256960644|ref|ZP_05564815.1| 30S ribosomal protein S11 [Enterococcus faecalis Merz96]
gi|256964157|ref|ZP_05568328.1| 30S ribosomal protein S11 [Enterococcus faecalis HIP11704]
gi|257078507|ref|ZP_05572868.1| 30S ribosomal protein S11 [Enterococcus faecalis JH1]
gi|257081522|ref|ZP_05575883.1| ribosomal protein S11 [Enterococcus faecalis E1Sol]
gi|257084170|ref|ZP_05578531.1| 30S ribosomal protein S11 [Enterococcus faecalis Fly1]
gi|257087997|ref|ZP_05582358.1| ribosomal protein S11 [Enterococcus faecalis D6]
gi|257088674|ref|ZP_05583035.1| 30S ribosomal protein S11 [Enterococcus faecalis CH188]
gi|257417600|ref|ZP_05594594.1| ribosomal protein S11 [Enterococcus faecalis AR01/DG]
gi|257418674|ref|ZP_05595668.1| 30S ribosomal protein S11 [Enterococcus faecalis T11]
gi|257421524|ref|ZP_05598514.1| 30S ribosomal protein S11 [Enterococcus faecalis X98]
gi|293382733|ref|ZP_06628658.1| 30S ribosomal protein S11 [Enterococcus faecalis R712]
gi|293388084|ref|ZP_06632612.1| 30S ribosomal protein S11 [Enterococcus faecalis S613]
gi|294781076|ref|ZP_06746427.1| 30S ribosomal protein S11 [Enterococcus faecalis PC1.1]
gi|300862263|ref|ZP_07108343.1| 30S ribosomal protein S11 [Enterococcus faecalis TUSoD Ef11]
gi|307269112|ref|ZP_07550473.1| 30S ribosomal protein S11 [Enterococcus faecalis TX4248]
gi|307274196|ref|ZP_07555404.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0855]
gi|307276421|ref|ZP_07557544.1| 30S ribosomal protein S11 [Enterococcus faecalis TX2134]
gi|307278631|ref|ZP_07559701.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0860]
gi|307286989|ref|ZP_07567064.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0109]
gi|307291670|ref|ZP_07571545.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0411]
gi|312901097|ref|ZP_07760385.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0470]
gi|312904659|ref|ZP_07763814.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0635]
gi|312908628|ref|ZP_07767570.1| 30S ribosomal protein S11 [Enterococcus faecalis DAPTO 512]
gi|312909224|ref|ZP_07768081.1| 30S ribosomal protein S11 [Enterococcus faecalis DAPTO 516]
gi|312952632|ref|ZP_07771496.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0102]
gi|34925214|sp|Q839E0|RS11_ENTFA RecName: Full=30S ribosomal protein S11
gi|29342334|gb|AAO80100.1| ribosomal protein S11 [Enterococcus faecalis V583]
gi|227072565|gb|EEI10528.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0104]
gi|227175045|gb|EEI56017.1| 30S ribosomal protein S11 [Enterococcus faecalis HH22]
gi|229304247|gb|EEN70243.1| 30S ribosomal protein S11 [Enterococcus faecalis ATCC 29200]
gi|229307867|gb|EEN73854.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1322]
gi|255962752|gb|EET95228.1| ribosomal protein S11 [Enterococcus faecalis T1]
gi|255967606|gb|EET98228.1| ribosomal protein S11 [Enterococcus faecalis T2]
gi|256597882|gb|EEU17058.1| ribosomal protein S11 [Enterococcus faecalis ATCC 4200]
gi|256683280|gb|EEU22975.1| ribosomal protein S11 [Enterococcus faecalis T3]
gi|256709701|gb|EEU24748.1| ribosomal protein S11 [Enterococcus faecalis T8]
gi|256947333|gb|EEU63965.1| ribosomal protein S11 [Enterococcus faecalis DS5]
gi|256951140|gb|EEU67772.1| 30S ribosomal protein S11 [Enterococcus faecalis Merz96]
gi|256954653|gb|EEU71285.1| 30S ribosomal protein S11 [Enterococcus faecalis HIP11704]
gi|256986537|gb|EEU73839.1| 30S ribosomal protein S11 [Enterococcus faecalis JH1]
gi|256989552|gb|EEU76854.1| ribosomal protein S11 [Enterococcus faecalis E1Sol]
gi|256992200|gb|EEU79502.1| 30S ribosomal protein S11 [Enterococcus faecalis Fly1]
gi|256996027|gb|EEU83329.1| ribosomal protein S11 [Enterococcus faecalis D6]
gi|256997486|gb|EEU84006.1| 30S ribosomal protein S11 [Enterococcus faecalis CH188]
gi|257159428|gb|EEU89388.1| ribosomal protein S11 [Enterococcus faecalis ARO1/DG]
gi|257160502|gb|EEU90462.1| 30S ribosomal protein S11 [Enterococcus faecalis T11]
gi|257163348|gb|EEU93308.1| 30S ribosomal protein S11 [Enterococcus faecalis X98]
gi|291079893|gb|EFE17257.1| 30S ribosomal protein S11 [Enterococcus faecalis R712]
gi|291082535|gb|EFE19498.1| 30S ribosomal protein S11 [Enterococcus faecalis S613]
gi|294451879|gb|EFG20330.1| 30S ribosomal protein S11 [Enterococcus faecalis PC1.1]
gi|295112523|emb|CBL31160.1| SSU ribosomal protein S11P [Enterococcus sp. 7L76]
gi|300848788|gb|EFK76545.1| 30S ribosomal protein S11 [Enterococcus faecalis TUSoD Ef11]
gi|306497289|gb|EFM66831.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0411]
gi|306501935|gb|EFM71224.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0109]
gi|306504691|gb|EFM73891.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0860]
gi|306506901|gb|EFM76048.1| 30S ribosomal protein S11 [Enterococcus faecalis TX2134]
gi|306509158|gb|EFM78220.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0855]
gi|306514592|gb|EFM83146.1| 30S ribosomal protein S11 [Enterococcus faecalis TX4248]
gi|310625415|gb|EFQ08698.1| 30S ribosomal protein S11 [Enterococcus faecalis DAPTO 512]
gi|310629420|gb|EFQ12703.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0102]
gi|310632011|gb|EFQ15294.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0635]
gi|311290466|gb|EFQ69022.1| 30S ribosomal protein S11 [Enterococcus faecalis DAPTO 516]
gi|311291769|gb|EFQ70325.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0470]
gi|315026810|gb|EFT38742.1| 30S ribosomal protein S11 [Enterococcus faecalis TX2137]
gi|315028851|gb|EFT40783.1| 30S ribosomal protein S11 [Enterococcus faecalis TX4000]
gi|315031164|gb|EFT43096.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0017]
gi|315035990|gb|EFT47922.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0027]
gi|315145361|gb|EFT89377.1| 30S ribosomal protein S11 [Enterococcus faecalis TX2141]
gi|315147146|gb|EFT91162.1| 30S ribosomal protein S11 [Enterococcus faecalis TX4244]
gi|315151096|gb|EFT95112.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0012]
gi|315153584|gb|EFT97600.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0031]
gi|315156236|gb|EFU00253.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0043]
gi|315158619|gb|EFU02636.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0312]
gi|315160752|gb|EFU04769.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0645]
gi|315165877|gb|EFU09894.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1302]
gi|315168125|gb|EFU12142.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1341]
gi|315171435|gb|EFU15452.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1342]
gi|315573539|gb|EFU85730.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0309B]
gi|315579351|gb|EFU91542.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0630]
gi|315582113|gb|EFU94304.1| 30S ribosomal protein S11 [Enterococcus faecalis TX0309A]
gi|323479447|gb|ADX78886.1| 30S ribosomal protein S11 [Enterococcus faecalis 62]
gi|327534029|gb|AEA92863.1| 30S ribosomal protein S11 [Enterococcus faecalis OG1RF]
Length = 129
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MAAKKVSRKRRVKKNIESGVAHIHSTFNNTIVMITDTHGNALAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +++V V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAATKVAMEHGLKTVDVTVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|332181993|gb|AEE17681.1| 30S ribosomal protein S11 [Treponema brennaborense DSM 12168]
Length = 126
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E+K++ G ++ +TFNNT +TITD GN ++W+S +GF G++K++PFAAQ +
Sbjct: 6 KRKEKKSVYEGNVYIQATFNNTIVTITDLKGNALSWASSGGLGFRGAKKSTPFAAQSVAE 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA ++G+ + V V G G GR+SA+R+L A+G + SI DVT I HNGCRPRK RR
Sbjct: 66 TAVQKAASYGLREVHVFVKGPGVGRESAVRSLGALGLKVKSISDVTPIPHNGCRPRKTRR 125
>gi|297569397|ref|YP_003690741.1| 30S ribosomal protein S11 [Desulfurivibrio alkaliphilus AHT2]
gi|296925312|gb|ADH86122.1| 30S ribosomal protein S11 [Desulfurivibrio alkaliphilus AHT2]
Length = 130
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + R++KNI G + STFNNT +T D GN I+W S +GF GSRK++
Sbjct: 1 MAKPKTARPKKRDKKNIPEGICFIKSTFNNTIVTFADQRGNVISWCSSGCLGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + KAQ HG+ +EV+V+G G GR+SA+RAL+ G + I D+T + HN
Sbjct: 61 PFAAQNAVETAVKKAQEHGLRKVEVRVNGPGPGRESAIRALQVAGIEVNYIRDMTTLPHN 120
Query: 120 GCRPRKRRRI 129
GC+P KRRR+
Sbjct: 121 GCKPPKRRRV 130
>gi|294675882|ref|YP_003576497.1| 30S ribosomal protein S11 [Rhodobacter capsulatus SB 1003]
gi|294474702|gb|ADE84090.1| 30S ribosomal protein S11 [Rhodobacter capsulatus SB 1003]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/129 (56%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI +G HV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRVKRKERKNIAAGVVHVNSSFNNTKILISDVQGNAISWSSSGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KAQ HG+ +++V+V G G+GR+SALRAL A+G I SI DVT IAHNG
Sbjct: 61 YAAQMAAEDAARKAQEHGLKTVDVEVQGPGSGRESALRALAAVGLNITSIRDVTPIAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|150025383|ref|YP_001296209.1| 30S ribosomal protein S11 [Flavobacterium psychrophilum JIP02/86]
gi|172048612|sp|A6GZ75|RS11_FLAPJ RecName: Full=30S ribosomal protein S11
gi|149771924|emb|CAL43398.1| 30S ribosomal protein S11 [Flavobacterium psychrophilum JIP02/86]
Length = 127
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ ++ R ++I G AH+ +TFNN I++T+ G ++WSS +GF GS+KN+P
Sbjct: 1 MAKASTKKRKVIVESI--GEAHISATFNNIIISLTNKKGEVVSWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A GM ++V V G G GR+SA+R+L G + I DVT + HNG
Sbjct: 59 YAAQMAAEDCSKVAMEAGMKKVKVYVKGPGNGRESAIRSLHNAGIEVTEIIDVTPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|317126888|ref|YP_004093170.1| 30S ribosomal protein S11 [Bacillus cellulosilyticus DSM 2522]
gi|315471836|gb|ADU28439.1| 30S ribosomal protein S11 [Bacillus cellulosilyticus DSM 2522]
Length = 130
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + R+RKNI SG AH+ STFNNT +TITD GN I+W+S +GF GSRK++
Sbjct: 1 MAKPKTTRSKRRQRKNIESGVAHIRSTFNNTIVTITDTSGNAISWASAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A HGM +EV V G GAGR++A+R+L+A G + I DVT + HN
Sbjct: 61 PFAAQTAAETAAKAAMEHGMKVVEVSVKGPGAGREAAIRSLQATGLEVNMIKDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|186684487|ref|YP_001867683.1| 30S ribosomal protein S11 [Nostoc punctiforme PCC 73102]
gi|226708392|sp|B2ITN2|RS11_NOSP7 RecName: Full=30S ribosomal protein S11
gi|186466939|gb|ACC82740.1| ribosomal protein S11 [Nostoc punctiforme PCC 73102]
Length = 131
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ ++++N+ SG A++ STFNN+ +TITD +G+ I+W+S GF G++K
Sbjct: 1 MARQPTKKSGSKKQKRNVPSGMAYIQSTFNNSIVTITDQNGDVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RAL+ G I I D+T I H
Sbjct: 61 TPFAAQTAAESAARRAIDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|120402445|ref|YP_952274.1| 30S ribosomal protein S11 [Mycobacterium vanbaalenii PYR-1]
gi|152060799|sp|A1T518|RS11_MYCVP RecName: Full=30S ribosomal protein S11
gi|119955263|gb|ABM12268.1| SSU ribosomal protein S11P [Mycobacterium vanbaalenii PYR-1]
Length = 137
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/128 (53%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R RE+KN+ G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PF
Sbjct: 10 PKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPF 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 70 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGC 129
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 130 RPPKRRRV 137
>gi|56961958|ref|YP_173680.1| 30S ribosomal protein S11 [Bacillus clausii KSM-K16]
gi|59798607|sp|Q5WLN6|RS11_BACSK RecName: Full=30S ribosomal protein S11
gi|56908192|dbj|BAD62719.1| 30S ribosomal protein S11 [Bacillus clausii KSM-K16]
Length = 133
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/130 (55%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
Query: 1 MPKS-PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++
Sbjct: 4 MAKKTNTRPKRRQRKNIDSGVAHIRSTFNNTIVTITDPHGNAISWASAGALGFKGSRKST 63
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HGM ++EV V G GAGR++A+R+L+A+G + I DVT + HN
Sbjct: 64 PFAAQMAAESAAKTAMEHGMKTIEVSVKGPGAGREAAIRSLQAVGLEVNMIKDVTPVPHN 123
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 124 GCRPPKRRRV 133
>gi|303256473|ref|ZP_07342487.1| 30S ribosomal protein S11 [Burkholderiales bacterium 1_1_47]
gi|331000667|ref|ZP_08324320.1| 30S ribosomal protein S11 [Parasutterella excrementihominis YIT
11859]
gi|302859964|gb|EFL83041.1| 30S ribosomal protein S11 [Burkholderiales bacterium 1_1_47]
gi|329570879|gb|EGG52590.1| 30S ribosomal protein S11 [Parasutterella excrementihominis YIT
11859]
Length = 137
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R R + +K + G AHV ++FNNT ITITD GN IA SS GF GSRK++PFAA
Sbjct: 12 AAQRARRKVKKVVTEGIAHVHASFNNTIITITDRQGNAIAASSSGAQGFKGSRKSTPFAA 71
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QVA + A +G+ ++EV+++G G GR+S++RAL A+G + SI DVT + HNG RP
Sbjct: 72 QVAAEQAGRHALEYGLKNVEVRITGPGPGRESSVRALNALGIRVTSIQDVTPVPHNGVRP 131
Query: 124 RKRRRI 129
KRRR+
Sbjct: 132 SKRRRV 137
>gi|298491421|ref|YP_003721598.1| 30S ribosomal protein S11 ['Nostoc azollae' 0708]
gi|298233339|gb|ADI64475.1| 30S ribosomal protein S11 ['Nostoc azollae' 0708]
Length = 131
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ ++++N+ +G A++ STFNN+ +TITD +G+ I+W+S GF G++K
Sbjct: 1 MARQPTKKSGSKKQKRNVPNGMAYIQSTFNNSIVTITDQNGDVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RAL+ +G I I D+T I H
Sbjct: 61 TPFAAQTAAESAARRAIDQGMRQIEVMVSGPGAGRETAIRALQGVGLEITLIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|256544531|ref|ZP_05471904.1| 30S ribosomal protein S11 [Anaerococcus vaginalis ATCC 51170]
gi|256399856|gb|EEU13460.1| 30S ribosomal protein S11 [Anaerococcus vaginalis ATCC 51170]
Length = 134
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
S R R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK++PFA
Sbjct: 8 SSAKRGRRRVKKNVERGQAHINSTFNNTMVTLTDAQGNALSWASAGQLGFRGSRKSTPFA 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + KA +G+ S+EV V G G+GR+SA+R+L+A G + I DVT I HNGCR
Sbjct: 68 AQEAALEAAKKAMEYGLKSVEVFVKGPGSGRESAIRSLQAAGLEVTMIKDVTPIPHNGCR 127
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 128 PPKRRRV 134
>gi|187932120|ref|YP_001892105.1| 30S ribosomal protein S11 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226708374|sp|B2SDW2|RS11_FRATM RecName: Full=30S ribosomal protein S11
gi|187713029|gb|ACD31326.1| 30S ribosomal protein S11 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 85/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADMALEYGVRNVDVLVKGPGSGRDSAVRALNVKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|119946250|ref|YP_943930.1| 30S ribosomal protein S11 [Psychromonas ingrahamii 37]
gi|119947103|ref|YP_944783.1| 30S ribosomal protein S11 [Psychromonas ingrahamii 37]
gi|152060811|sp|A1SXW6|RS11_PSYIN RecName: Full=30S ribosomal protein S11
gi|119864854|gb|ABM04331.1| SSU ribosomal protein S11P [Psychromonas ingrahamii 37]
gi|119865707|gb|ABM05184.1| SSU ribosomal protein S11P [Psychromonas ingrahamii 37]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P+R R R +K + G AH+ ++FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTPTRARKRVKKQVADGMAHIHASFNNTIVTITDRQGNALSWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A+ +G+ ++EV V+G G GR+S++RAL A GF + +I DVT I HNG
Sbjct: 61 FAAQIAAERAAEAAKEYGLKNVEVFVNGPGPGRESSIRALNAAGFRVTNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|227530230|ref|ZP_03960279.1| ribosomal protein S11 [Lactobacillus vaginalis ATCC 49540]
gi|227349905|gb|EEJ40196.1| ribosomal protein S11 [Lactobacillus vaginalis ATCC 49540]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KN+ +G AH+ STFNNT I ITD GN +AWSS V+GF GSRK++P
Sbjct: 1 MATKKGTRKRRAKKNVETGVAHIHSTFNNTLIMITDVQGNAVAWSSAGVLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++EV+V G G+GR+SA+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMKTVEVEVKGPGSGRESAIRALQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|315172669|gb|EFU16686.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1346]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GS+K+ P
Sbjct: 1 MAAKKVSRKRRVKKNIESGVAHIHSTFNNTIVMITDTHGNALAWSSAGSLGFKGSKKSPP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +++V V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAATKVAMEHGLKTVDVTVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|223931044|ref|YP_002586904.1| ribosomal protein S11 [Syntrichia ruralis]
gi|219562258|gb|ACL27589.1| ribosomal protein S11 [Syntrichia ruralis]
Length = 130
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPK +I + ++ I G H+ ++FNNT +T+TD G ++WSS GF G++K++
Sbjct: 1 MPKLVKKISLRKGKRRIPKGVIHIQASFNNTIVTVTDIRGQAVSWSSAGACGFKGTKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAVENAIRVLIDQGMKQAEVMISGPGPGRDTALRTIRRSGIILNFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|282880976|ref|ZP_06289667.1| 30S ribosomal protein S11 [Prevotella timonensis CRIS 5C-B1]
gi|281305199|gb|EFA97268.1| 30S ribosomal protein S11 [Prevotella timonensis CRIS 5C-B1]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/129 (40%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R + G+ H+ S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTTASKKRNVRVDAIGQLHIHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKIAYDLGLRKVKAYVKGPGNGRESAIRAVHGAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|89891132|ref|ZP_01202640.1| 30S ribosomal protein S11 RpsK [Flavobacteria bacterium BBFL7]
gi|89516776|gb|EAS19435.1| 30S ribosomal protein S11 RpsK [Flavobacteria bacterium BBFL7]
Length = 129
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 80/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + R+ G H+ S+FNN +++T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKSKTVSKKRKVVVESVGEVHISSSFNNILVSLTNKKGEVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D S A G+ ++ V G G GR+SA+R++ G + I DVT + HNG
Sbjct: 61 YAAQLAAEDASKVAHEAGLRKVKAYVKGPGNGRESAIRSIHNSGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|237749538|ref|ZP_04580018.1| small subunit ribosomal protein S11 [Oxalobacter formigenes OXCC13]
gi|229380900|gb|EEO30991.1| small subunit ribosomal protein S11 [Oxalobacter formigenes OXCC13]
Length = 133
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ +R+R + ++NI G HV ++FNNT ITITD GN + W++ GF GSR
Sbjct: 1 MAKASNSAAARVRKKVKRNIAEGVVHVHASFNNTIITITDRQGNALTWATSGGAGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + AQ +G+ +LEVK+ G G GR+SA+RAL +G I I D+T I
Sbjct: 61 KSTPFAAQVAAEAAGKVAQEYGIKTLEVKIKGPGPGRESAVRALNNLGIRITQIQDITPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|294507074|ref|YP_003571132.1| 30S ribosomal protein S11 [Salinibacter ruber M8]
gi|294343402|emb|CBH24180.1| 30S ribosomal protein S11 [Salinibacter ruber M8]
Length = 134
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 82/125 (65%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
R + +GRA+V +TFNN +T+TD +GNTI+W+S +GF GSRKN+P+AAQ
Sbjct: 10 KRTPRKKNVVVESNGRAYVKATFNNVIVTLTDQYGNTISWASAGKMGFKGSRKNTPYAAQ 69
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
A + + +A G+ ++V V G G+GR+ A+RA+ G + SI DVT + HNGCRP
Sbjct: 70 KAGESAANEAYELGLRRVDVYVKGPGSGREGAIRAMSESGLEVASIRDVTPLPHNGCRPP 129
Query: 125 KRRRI 129
KRRR+
Sbjct: 130 KRRRV 134
>gi|67923561|ref|ZP_00517034.1| Ribosomal protein S11 [Crocosphaera watsonii WH 8501]
gi|67854587|gb|EAM49873.1| Ribosomal protein S11 [Crocosphaera watsonii WH 8501]
Length = 130
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + R++KN+ +G AH+ STFNNT ITI+D G+ ++WSS GF G++K +
Sbjct: 1 MARPTKKGGPKRQKKNVPNGVAHIQSTFNNTIITISDTKGDVVSWSSAGASGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A D + +A + GM +EV VSG GAGR++A+RAL+ G I I DVT I HN
Sbjct: 61 PFAAQTAADSAARRAIDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|329118619|ref|ZP_08247323.1| 30S ribosomal protein S11 [Neisseria bacilliformis ATCC BAA-1200]
gi|327465354|gb|EGF11635.1| 30S ribosomal protein S11 [Neisseria bacilliformis ATCC BAA-1200]
Length = 131
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R+R + RK + G HV ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKANTASRVRRKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+S++RAL A+GF I SI DVT + H
Sbjct: 61 TPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|313677144|ref|YP_004055140.1| SSU ribosomal protein s11p [Marivirga tractuosa DSM 4126]
gi|312943842|gb|ADR23032.1| SSU ribosomal protein S11P [Marivirga tractuosa DSM 4126]
Length = 130
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R G+AH+ ++FNN I++T+ G I+W+S +GF GS+KN+
Sbjct: 1 MAQKRKDKAKKRVVNVEAIGQAHIRASFNNIIISLTNSTGQVISWASAGKMGFKGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+A QVA + + A + G+ +EV V G GAGRDSA+R ++ G + I DVT + HN
Sbjct: 61 PYAGQVAAQNAAQTAYDLGLRKVEVYVKGPGAGRDSAIRTIQNTGIEVTVIKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|308272955|emb|CBX29559.1| 30S ribosomal protein S11 [uncultured Desulfobacterium sp.]
Length = 128
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/115 (60%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG H+ STFNNT I+ITDP GN + WSS V GF GSRK++PFAAQ+A +D + KA
Sbjct: 14 NIPSGVVHIYSTFNNTIISITDPAGNVVGWSSAGVQGFKGSRKSTPFAAQLAAEDAAKKA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM +++V V G G GR+SALRAL++ GF I+ I DVT I HNGCR KRRR+
Sbjct: 74 MEHGMKNVDVYVKGPGPGRESALRALQSTGFNILMIKDVTPIPHNGCRSPKRRRV 128
>gi|150251506|ref|YP_001312239.1| ribosomal protein S11 [Cycas taitungensis]
gi|172048629|sp|A6H5L4|RR11_CYCTA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|149941556|dbj|BAF64980.1| ribosomal protein S11 [Cycas taitungensis]
gi|156598016|gb|ABU85274.1| ribosomal protein S11 [Cycas micronesica]
Length = 130
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +I R + I G HV ++FNNT +T+TD G ++WSS GF G+++++
Sbjct: 1 MSKPIRKIGSRRNERRIPKGVIHVQASFNNTIVTVTDVRGQVVSWSSAGACGFKGTKRST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAENAIRTLMDQGMERAEVMISGPGPGRDTALRAIRRSGVLLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|212697278|ref|ZP_03305406.1| hypothetical protein ANHYDRO_01846 [Anaerococcus hydrogenalis DSM
7454]
gi|325848962|ref|ZP_08170472.1| 30S ribosomal protein S11 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|212675727|gb|EEB35334.1| hypothetical protein ANHYDRO_01846 [Anaerococcus hydrogenalis DSM
7454]
gi|325480606|gb|EGC83668.1| 30S ribosomal protein S11 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 134
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
S R R R +KN+ G+AH+ STFNNT +T+TD GN ++W+S +GF GSRK++PFA
Sbjct: 8 SSAKRGRRRVKKNVERGQAHINSTFNNTMVTLTDAQGNALSWASAGQLGFRGSRKSTPFA 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + KA ++G+ S+EV V G G+GR+SA+R+L+A G + I DVT I HNGCR
Sbjct: 68 AQEAALEAAKKAMDYGLKSVEVFVKGPGSGRESAIRSLQAAGLEVTMIKDVTPIPHNGCR 127
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 128 PPKRRRV 134
>gi|154684660|ref|YP_001419821.1| 30S ribosomal protein S11 [Bacillus amyloliquefaciens FZB42]
gi|166231799|sp|A7Z0R4|RS11_BACA2 RecName: Full=30S ribosomal protein S11
gi|154350511|gb|ABS72590.1| RpsK [Bacillus amyloliquefaciens FZB42]
Length = 131
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI SG AH+ STFNNT +TITD HGN ++WSS +GF GSRK++PF
Sbjct: 4 ARKQNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNALSWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|51209923|ref|YP_063587.1| ribosomal protein S11 [Gracilaria tenuistipitata var. liui]
gi|62287422|sp|Q6B8X3|RR11_GRATL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|50657677|gb|AAT79662.1| 30S ribosomal protein S11 [Gracilaria tenuistipitata var. liui]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +++KNI++G H+ STFNNT ITITD G+T++WSS GF G++K +P
Sbjct: 1 MARQIRKTHAKQKKNIINGITHIKSTFNNTLITITDLKGSTLSWSSAGASGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A G+ EV V+G GAGR++A+RAL+A G I I D+T I HNG
Sbjct: 61 FAAQIAAEKAAKQAIEQGIRQTEVLVNGPGAGRETAIRALQATGINITLIKDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|78186093|ref|YP_374136.1| 30S ribosomal protein S11 [Chlorobium luteolum DSM 273]
gi|91207665|sp|Q3B6D8|RS11_PELLD RecName: Full=30S ribosomal protein S11
gi|78165995|gb|ABB23093.1| SSU ribosomal protein S11P [Chlorobium luteolum DSM 273]
Length = 127
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 79/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+QV ++ + +A +
Sbjct: 15 PEGVVHIKASFNNIMVTITDVQGNTVSWSSAGKNGFRGSKKNTPYASQVTSEGAAKEAYD 74
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++V + G GAGRD+A+RAL+ G + SI D+T + HNGCRP KRRR+
Sbjct: 75 LGMRHVDVFIKGPGAGRDAAIRALQGAGLEVRSIKDITPLPHNGCRPPKRRRV 127
>gi|297180259|gb|ADI16478.1| hypothetical protein [uncultured bacterium HF4000_05M23]
Length = 127
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP+ R R RE+K + G+A++ +TFNNT IT+TDP GN I+ SS +GF GSRK++
Sbjct: 1 MPRQ--RTRRREKKFVPQGKAYINATFNNTLITLTDPQGNVISQSSAGAMGFRGSRKSTA 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + + A HG+ ++ V V G GAGR++A+RA++A G +VSI DVT + HNG
Sbjct: 59 FAAQRAGETAAHSAIEHGLKTVNVMVKGPGAGREAAIRAIQAAGIRVVSIRDVTSVPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|150020871|ref|YP_001306225.1| 30S ribosomal protein S11 [Thermosipho melanesiensis BI429]
gi|166231840|sp|A6LLN9|RS11_THEM4 RecName: Full=30S ribosomal protein S11
gi|149793392|gb|ABR30840.1| ribosomal protein S11 [Thermosipho melanesiensis BI429]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R+ R++K + G H+ S++NNT IT+TDP G I W S GF G+RK +
Sbjct: 1 MAKKTRRVVKRKKKIAVDHGVVHIKSSYNNTIITLTDPDGKVITWGSGGTAGFQGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + +A G+ +++ V G G+GR++A+R +A G I +I DVT I N
Sbjct: 61 PYAAQLAADQVAKEAVKLGIKKVDILVKGPGSGREAAIRTFQAAGLEIGTIKDVTPIPFN 120
Query: 120 GCRPRKRR 127
GCRP+K+R
Sbjct: 121 GCRPKKKR 128
>gi|256830515|ref|YP_003159243.1| ribosomal protein S11 [Desulfomicrobium baculatum DSM 4028]
gi|256579691|gb|ACU90827.1| ribosomal protein S11 [Desulfomicrobium baculatum DSM 4028]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + I+ +E++NI +G AHV STFNNT IT TDP GN I+W+S GF GSRKN+P
Sbjct: 1 MARPQRVIKKKEKRNIPTGIAHVNSTFNNTIITFTDPTGNVISWASSGASGFKGSRKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + + KA GM S+ + V G G+GR+SA+RA+ A+G + I DVT I HNG
Sbjct: 61 FAAQKAAETAARKAMECGMRSVGILVKGPGSGRESAMRAINAVGLRVAFIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|17231684|ref|NP_488232.1| 30S ribosomal protein S11 [Nostoc sp. PCC 7120]
gi|75906937|ref|YP_321233.1| 30S ribosomal protein S11 [Anabaena variabilis ATCC 29413]
gi|48474915|sp|Q8YPK2|RS11_ANASP RecName: Full=30S ribosomal protein S11
gi|91207730|sp|Q3MF98|RS11_ANAVT RecName: Full=30S ribosomal protein S11
gi|17133327|dbj|BAB75891.1| 30S ribosomal protein S11 [Nostoc sp. PCC 7120]
gi|75700662|gb|ABA20338.1| SSU ribosomal protein S11P [Anabaena variabilis ATCC 29413]
Length = 131
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ ++++N+ +G A++ STFNN+ +TITD +G+ I+W+S GF G++K
Sbjct: 1 MARQPTKKSGSKKQKRNVPNGMAYIQSTFNNSIVTITDQNGDVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RAL+ G I I D+T I H
Sbjct: 61 TPFAAQTAAESAARRAIDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|150392133|ref|YP_001322182.1| 30S ribosomal protein S11 [Alkaliphilus metalliredigens QYMF]
gi|171460827|sp|A6TWF5|RS11_ALKMQ RecName: Full=30S ribosomal protein S11
gi|149951995|gb|ABR50523.1| ribosomal protein S11 [Alkaliphilus metalliredigens QYMF]
Length = 132
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 67/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K + R ++RKNI G+AH+ STFNN+ +T+TD GNTI WS +GF GSRK
Sbjct: 1 MAKVVRKKTVRRKKDRKNIERGQAHIQSTFNNSIVTLTDMQGNTIGWSCAGQLGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+ + + A HG+ ++EV V G GAGR++A+RAL+A G + I DVT I
Sbjct: 61 STPFAAQMCAEAAAKSAMEHGLKTIEVFVKGPGAGREAAIRALQAAGLEVSLIKDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|313887091|ref|ZP_07820790.1| 30S ribosomal protein S11 [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923502|gb|EFR34312.1| 30S ribosomal protein S11 [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176608|gb|AEE12298.1| 30S ribosomal protein S11 [Porphyromonas asaccharolytica DSM 20707]
Length = 128
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K G+AH+ S+FNN IT+T+ G I+WSS +GF S+KN+P
Sbjct: 1 MAKKTV-TKKRAVKVDAQGQAHIHSSFNNIIITLTNSEGQVISWSSAGKMGFRSSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 60 YAAQLAAQDCAKTAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIVDVTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 120 CRPPKRRKV 128
>gi|148544671|ref|YP_001272041.1| 30S ribosomal protein S11 [Lactobacillus reuteri DSM 20016]
gi|184154024|ref|YP_001842365.1| 30S ribosomal protein S11 [Lactobacillus reuteri JCM 1112]
gi|194466928|ref|ZP_03072915.1| ribosomal protein S11 [Lactobacillus reuteri 100-23]
gi|227363794|ref|ZP_03847901.1| ribosomal protein S11 [Lactobacillus reuteri MM2-3]
gi|227543598|ref|ZP_03973647.1| ribosomal protein S11 [Lactobacillus reuteri CF48-3A]
gi|259502555|ref|ZP_05745457.1| 30S ribosomal protein S11 [Lactobacillus antri DSM 16041]
gi|300909373|ref|ZP_07126834.1| 30S ribosomal protein S11 [Lactobacillus reuteri SD2112]
gi|312870515|ref|ZP_07730634.1| 30S ribosomal protein S11 [Lactobacillus oris PB013-T2-3]
gi|325683005|ref|ZP_08162521.1| 30S ribosomal protein S11 [Lactobacillus reuteri MM4-1A]
gi|166991580|sp|A5VLI0|RS11_LACRD RecName: Full=30S ribosomal protein S11
gi|226708381|sp|B2G8V3|RS11_LACRJ RecName: Full=30S ribosomal protein S11
gi|148531705|gb|ABQ83704.1| SSU ribosomal protein S11P [Lactobacillus reuteri DSM 20016]
gi|154705528|gb|ABS84190.1| ribosomal protein S11 [Lactobacillus reuteri]
gi|183225368|dbj|BAG25885.1| 30S ribosomal protein S11 [Lactobacillus reuteri JCM 1112]
gi|194453964|gb|EDX42861.1| ribosomal protein S11 [Lactobacillus reuteri 100-23]
gi|227071151|gb|EEI09467.1| ribosomal protein S11 [Lactobacillus reuteri MM2-3]
gi|227186438|gb|EEI66509.1| ribosomal protein S11 [Lactobacillus reuteri CF48-3A]
gi|259169507|gb|EEW54002.1| 30S ribosomal protein S11 [Lactobacillus antri DSM 16041]
gi|300893238|gb|EFK86597.1| 30S ribosomal protein S11 [Lactobacillus reuteri SD2112]
gi|311093977|gb|EFQ52302.1| 30S ribosomal protein S11 [Lactobacillus oris PB013-T2-3]
gi|324977355|gb|EGC14306.1| 30S ribosomal protein S11 [Lactobacillus reuteri MM4-1A]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KN+ +G AH+ STFNNT I ITD GN +AWSS V+GF GSRK++P
Sbjct: 1 MATKKGTRKRRAKKNVETGVAHIHSTFNNTLIMITDVQGNAVAWSSAGVLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++EV+V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMKTVEVEVKGPGSGREAAIRALQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|299820980|ref|ZP_07052869.1| 30S ribosomal protein S11 [Listeria grayi DSM 20601]
gi|299818001|gb|EFI85236.1| 30S ribosomal protein S11 [Listeria grayi DSM 20601]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT + ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MARKTNTRKRRVKKNIEAGIAHIRSTFNNTIVMITDVHGNALAWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAESAAKSAQEHGIKTLEVTVKGPGAGREAAIRALQAAGIEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|307718229|ref|YP_003873761.1| 30S ribosomal protein S11 [Spirochaeta thermophila DSM 6192]
gi|306531954|gb|ADN01488.1| 30S ribosomal protein S11 [Spirochaeta thermophila DSM 6192]
Length = 123
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 85/121 (70%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E++ + G+ ++ +TFNNT +T+TD +GN ++W+S +GF G++K++P+AAQV +
Sbjct: 3 KKKEKRTVYEGKVYIQATFNNTIVTVTDMNGNCVSWASAGALGFRGAKKSTPYAAQVTAE 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA +HG+ V V G G GR++A+RA+ A+G + S+ D+T I HNGCRPRK RR
Sbjct: 63 TAVKKAMDHGLQEAHVYVKGPGVGREAAIRAIDALGVRVRSLHDITPIPHNGCRPRKARR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|167755937|ref|ZP_02428064.1| hypothetical protein CLORAM_01457 [Clostridium ramosum DSM 1402]
gi|237733254|ref|ZP_04563735.1| 30S ribosomal protein S11 [Mollicutes bacterium D7]
gi|167703929|gb|EDS18508.1| hypothetical protein CLORAM_01457 [Clostridium ramosum DSM 1402]
gi|229383635|gb|EEO33726.1| 30S ribosomal protein S11 [Coprobacillus sp. D7]
Length = 130
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + R +KNI G AHV STFNNT +TITD HGN + WSS +GF GSRK++
Sbjct: 1 MAKVKQVRGKKRAKKNIAKGVAHVHSTFNNTIVTITDEHGNVLTWSSAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A++ + + +HG+ S+EV V G G GR++A+RAL+A G + +I DVT I HN
Sbjct: 61 PFAAQMASEAAAKASMDHGVKSVEVCVKGPGPGREAAVRALQAAGLEVTAINDVTPIPHN 120
Query: 120 GCRPRKRRR 128
GCRP KR R
Sbjct: 121 GCRPPKRPR 129
>gi|138893809|ref|YP_001124262.1| 30S ribosomal protein S11 [Geobacillus thermodenitrificans NG80-2]
gi|196250998|ref|ZP_03149680.1| ribosomal protein S11 [Geobacillus sp. G11MC16]
gi|152060591|sp|A4IJL3|RS11_GEOTN RecName: Full=30S ribosomal protein S11
gi|134265322|gb|ABO65517.1| SSU ribosomal protein S11P [Geobacillus thermodenitrificans NG80-2]
gi|196209470|gb|EDY04247.1| ribosomal protein S11 [Geobacillus sp. G11MC16]
Length = 129
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/129 (55%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R RKNI +G AH+ STFNNT +TITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MARRTNTRKRRVRKNIDTGIAHIRSTFNNTIVTITDVHGNAIAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT I HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|168334325|ref|ZP_02692512.1| 30S ribosomal protein S11 [Epulopiscium sp. 'N.t. morphotype B']
Length = 135
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/128 (49%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + R R+RKN+ G AH+ STFNNT +T+TD +GN ++W+S +GF GSRK++P+
Sbjct: 8 AKKSTNKRRRDRKNVEKGMAHIQSTFNNTMVTLTDANGNALSWASAGGLGFRGSRKSTPY 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + +A A +G+ +EV V G G+GR++A+RAL+A G + I DVT + HNGC
Sbjct: 68 AAQMAAETAAAAAMEYGLKQVEVMVKGPGSGREAAIRALQAAGLEVTLIKDVTPVPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|325287072|ref|YP_004262862.1| 30S ribosomal protein S11 [Cellulophaga lytica DSM 7489]
gi|324322526|gb|ADY29991.1| 30S ribosomal protein S11 [Cellulophaga lytica DSM 7489]
Length = 130
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS ++ + + + S G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+
Sbjct: 1 MAKSNTKTAKKRKVIVESVGEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA++DC+ A G+ ++V V G G GR+SA+RA+ G + I DVT + HN
Sbjct: 61 PYAAQVASEDCAKVAHEAGLRKVKVYVKGPGNGRESAIRAIHNSGIEVTEIIDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|228470724|ref|ZP_04055575.1| 30S ribosomal protein S11 [Porphyromonas uenonis 60-3]
gi|228307581|gb|EEK16577.1| 30S ribosomal protein S11 [Porphyromonas uenonis 60-3]
Length = 128
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K G+AH+ S+FNN IT+T+ G I+WSS +GF S+KN+P
Sbjct: 1 MAKKTV-TKKRAVKVDAQGQAHIHSSFNNIIITLTNSEGQVISWSSAGKMGFRSSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++ V G G GR+SA+R + G + I DVT + HNG
Sbjct: 60 YAAQLAAQDCAKTAFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 120 CRPPKRRKV 128
>gi|15828061|ref|NP_302324.1| 30S ribosomal protein S11 [Mycobacterium leprae TN]
gi|221230538|ref|YP_002503954.1| 30S ribosomal protein S11 [Mycobacterium leprae Br4923]
gi|7388114|sp|Q9X7A0|RS11_MYCLE RecName: Full=30S ribosomal protein S11
gi|254811035|sp|B8ZSH8|RS11_MYCLB RecName: Full=30S ribosomal protein S11
gi|4539114|emb|CAB39835.1| putative 30S ribosomal protein S11 [Mycobacterium leprae]
gi|13093614|emb|CAC30914.1| 30S ribosomal protein S11 [Mycobacterium leprae]
gi|219933645|emb|CAR72056.1| 30S ribosomal protein S11 [Mycobacterium leprae Br4923]
Length = 138
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/128 (54%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R RE+KNI G AH+ STFNNT +TITD GN IAW+S VGF GSRK++PF
Sbjct: 11 PKKGQKTRKREKKNIPYGAAHIKSTFNNTIVTITDQQGNVIAWASSGHVGFKGSRKSTPF 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 71 AAQLAAENAARKAQEHGVRKVDVFVMGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGC 130
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 131 RPPKRRRV 138
>gi|237747388|ref|ZP_04577868.1| small subunit ribosomal protein S11 [Oxalobacter formigenes HOxBLS]
gi|229378739|gb|EEO28830.1| small subunit ribosomal protein S11 [Oxalobacter formigenes HOxBLS]
Length = 133
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKS----PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ +R+R + ++NI G AHV ++FNNT ITITD GN + W++ GF GSR
Sbjct: 1 MAKASNSAAARVRKKVKRNIAEGVAHVHASFNNTIITITDRQGNALTWATSGGAGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + A +G+ +LEVK+ G G GR+SA+RAL +G I I D+T I
Sbjct: 61 KSTPFAAQVAAEAAGKVAIEYGIKNLEVKIKGPGPGRESAVRALNGLGIRITQIQDITPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRRI
Sbjct: 121 PHNGCRPPKRRRI 133
>gi|118467427|ref|YP_885904.1| 30S ribosomal protein S11 [Mycobacterium smegmatis str. MC2 155]
gi|152060795|sp|A0QSL6|RS11_MYCS2 RecName: Full=30S ribosomal protein S11
gi|118168714|gb|ABK69610.1| ribosomal protein S11 [Mycobacterium smegmatis str. MC2 155]
Length = 138
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + R RE+KN+ G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PF
Sbjct: 11 AKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPF 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 71 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 130
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 131 RPPKRRRV 138
>gi|295135678|ref|YP_003586354.1| 30S ribosomal protein S11 [Zunongwangia profunda SM-A87]
gi|294983693|gb|ADF54158.1| 30S ribosomal protein S11 [Zunongwangia profunda SM-A87]
Length = 130
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS + + + N+ S G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+
Sbjct: 1 MAKSTKTAQKKRKVNVESIGEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A++D S A G+ ++V V G G GR+SA+R++ G + I DVT + HN
Sbjct: 61 PYAAQLASEDASKVAHEAGLRKVKVYVKGPGNGRESAIRSIHNSGIEVTEIVDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|159904197|ref|YP_001551541.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9211]
gi|226708401|sp|A9BCM5|RS11_PROM4 RecName: Full=30S ribosomal protein S11
gi|159889373|gb|ABX09587.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9211]
Length = 130
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + ++N+ +G H+ STFNNT ++ITD +G ++WSS GF G+RK +
Sbjct: 1 MATPAKKTGSKKSKRNVPNGVVHIQSTFNNTIVSITDTNGEVVSWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|296333139|ref|ZP_06875593.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672842|ref|YP_003864513.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149755|gb|EFG90650.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411085|gb|ADM36203.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KN+ SG AH+ STFNNT +TITD HGN ++WSS +GF GSRK++PF
Sbjct: 4 ARKSNTRKRRVKKNVESGIAHIRSTFNNTIVTITDTHGNALSWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|302344331|ref|YP_003808860.1| 30S ribosomal protein S11 [Desulfarculus baarsii DSM 2075]
gi|301640944|gb|ADK86266.1| 30S ribosomal protein S11 [Desulfarculus baarsii DSM 2075]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ R + +ERKN+ +G H+ STFNNT +TI D G TI+WSS V GF GSRK+
Sbjct: 1 MAKAQKRNVRKRKERKNVPTGVVHIQSTFNNTIVTICDQQGATISWSSSGVQGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A +D + KA HGM ++EV V G GAGR++ALRA+ G + I DVT + H
Sbjct: 61 TPFAAQLAAEDAAKKAMEHGMRTVEVNVKGPGAGREAALRAINNAGLNVSIIRDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|145219086|ref|YP_001129795.1| 30S ribosomal protein S11 [Prosthecochloris vibrioformis DSM 265]
gi|189040426|sp|A4SCT4|RS11_PROVI RecName: Full=30S ribosomal protein S11
gi|145205250|gb|ABP36293.1| SSU ribosomal protein S11P [Chlorobium phaeovibrioides DSM 265]
Length = 127
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + ++ K G H+ ++FNN ITITD GNT++WSS GF GS+KN+P
Sbjct: 1 MATTSR--KKKKVKVTPEGAVHIKASFNNIMITITDVQGNTVSWSSAGKNGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+A+QV ++ + +A + GM ++V + G GAGRD+A+RAL+ +G + +I D+T + HNG
Sbjct: 59 YASQVTSEAAAKEAYDLGMRHVDVFIKGPGAGRDAAIRALQGVGLEVRTIKDITPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|288554752|ref|YP_003426687.1| 30S ribosomal protein S11 [Bacillus pseudofirmus OF4]
gi|288545912|gb|ADC49795.1| 30S ribosomal protein S11 [Bacillus pseudofirmus OF4]
Length = 130
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 1 MPKS-PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + R+RKN+ +G AH+ STFNNT +TITD HGN I+W+S +GF GSRK++
Sbjct: 1 MAKKTNTRPKRRQRKNVEAGVAHIRSTFNNTIVTITDTHGNAISWASAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HGM ++EV V G GAGR++A+R+L+A+G + I DVT + HN
Sbjct: 61 PFAAQMAAETAAKTAMEHGMKTIEVSVKGPGAGREAAIRSLQAVGLEVNMIKDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|189219452|ref|YP_001940093.1| Ribosomal protein S11 [Methylacidiphilum infernorum V4]
gi|189186310|gb|ACD83495.1| Ribosomal protein S11 [Methylacidiphilum infernorum V4]
Length = 180
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/127 (47%), Positives = 85/127 (66%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ + R K I +G ++++TFNNT +TITD G TIAWSS GF G++K++ +
Sbjct: 54 EKIKIPKVRTGKAIYNGIVNILATFNNTIVTITDMSGKTIAWSSAGKCGFRGTKKSTAYV 113
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+ D + +A HGM + VKV G G GR+SA+RAL+A+G + SI DVT I HNGCR
Sbjct: 114 AQLVAQDAARQAMGHGMREVIVKVKGPGTGRESAIRALQAVGLEVTSILDVTPIPHNGCR 173
Query: 123 PRKRRRI 129
P+K+RR+
Sbjct: 174 PKKQRRV 180
>gi|148243237|ref|YP_001228394.1| 30S ribosomal protein S11 [Synechococcus sp. RCC307]
gi|166231839|sp|A5GVY2|RS11_SYNR3 RecName: Full=30S ribosomal protein S11
gi|147851547|emb|CAK29041.1| 30S ribosomal protein S11 [Synechococcus sp. RCC307]
Length = 129
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 84/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + ++N+ +G AH+ STFNNT ++ITD G IAWSS GF G+RK +P
Sbjct: 1 MAKTAKKGPKKAKRNVPNGVAHIQSTFNNTIVSITDTAGEVIAWSSAGASGFKGARKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HNG
Sbjct: 61 FAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CR KRRR+
Sbjct: 121 CRRAKRRRV 129
>gi|119511156|ref|ZP_01630273.1| 30S ribosomal protein S11 [Nodularia spumigena CCY9414]
gi|119464144|gb|EAW45064.1| 30S ribosomal protein S11 [Nodularia spumigena CCY9414]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/131 (45%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ ++++N+ +G A++ STFNN+ +TITD +G+ I+W+S GF G++K
Sbjct: 1 MARQPTKKGGSKKQKRNVPNGMAYIQSTFNNSIVTITDQNGDVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM +EV VSG GAGR++A+RA++ G I I D+T I H
Sbjct: 61 TPFAAQTAAESAARRAMDQGMRQIEVMVSGPGAGRETAIRAIQGAGLEITLIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|313904925|ref|ZP_07838296.1| 30S ribosomal protein S11 [Eubacterium cellulosolvens 6]
gi|313470182|gb|EFR65513.1| 30S ribosomal protein S11 [Eubacterium cellulosolvens 6]
Length = 130
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPK+ + R K N+ G+AH+ ++FNNT +T+TD GN ++W+S +GF GSRK++
Sbjct: 1 MPKATKKTTKRRVKKNVERGQAHIQASFNNTIVTLTDTEGNALSWASAGGLGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + + A HG+ S+EV V G G+GR++A+RAL A G + SICDVT + HN
Sbjct: 61 PYAAQMAAETATKAALVHGLKSVEVFVKGPGSGREAAIRALAAAGLEVTSICDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|169830462|ref|YP_001716444.1| ribosomal protein S11 [Candidatus Desulforudis audaxviator MP104C]
gi|254765379|sp|B1I1B1|RS11_DESAP RecName: Full=30S ribosomal protein S11
gi|169637306|gb|ACA58812.1| ribosomal protein S11 [Candidatus Desulforudis audaxviator MP104C]
Length = 128
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R + +ERKNI +G AH+ STFNNT ITI+D GN I+WSS VGF GSRK++P
Sbjct: 1 MARRP-RAKKKERKNIETGVAHIKSTFNNTVITISDVRGNAISWSSAGTVGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A HGM + V V G GAGR++A+R+L+A G + I DVT I HNG
Sbjct: 60 FAAQLAAEKAAREAMEHGMREVAVMVKGPGAGREAAIRSLQAAGLEVSLIKDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|315649672|ref|ZP_07902756.1| ribosomal protein S11 [Paenibacillus vortex V453]
gi|315274860|gb|EFU38236.1| ribosomal protein S11 [Paenibacillus vortex V453]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/128 (57%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGGLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 64 AAQMAAESAAKAAMEHGMKAVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|304653871|ref|YP_003864093.1| 30S ribosomal protein S11 [Paenibacillus sp. Y412MC10]
gi|329922032|ref|ZP_08277825.1| 30S ribosomal protein S11 [Paenibacillus sp. HGF5]
gi|328942415|gb|EGG38679.1| 30S ribosomal protein S11 [Paenibacillus sp. HGF5]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/128 (57%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGGLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 64 AAQMAAETAAKAAMEHGMKAVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|317485798|ref|ZP_07944662.1| 30S ribosomal protein S11 [Bilophila wadsworthia 3_1_6]
gi|316922904|gb|EFV44126.1| 30S ribosomal protein S11 [Bilophila wadsworthia 3_1_6]
Length = 129
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + RE+KN+ G AH+ ++FNNT IT TD GNT++W+S GF GSRK++P
Sbjct: 1 MARPKRVAKKREKKNVPLGVAHIQASFNNTIITFTDTRGNTVSWASAGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + KAQ++GM ++ + V G G+GR++A+RA+ A GF + I DVT I HNG
Sbjct: 61 FAAQVAAEQAARKAQDNGMRTVGIYVKGPGSGREAAMRAINAAGFKVAFIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|294497010|ref|YP_003560710.1| 30S ribosomal protein S11 [Bacillus megaterium QM B1551]
gi|295702375|ref|YP_003595450.1| 30S ribosomal protein S11 [Bacillus megaterium DSM 319]
gi|294346947|gb|ADE67276.1| 30S ribosomal protein S11 [Bacillus megaterium QM B1551]
gi|294800034|gb|ADF37100.1| 30S ribosomal protein S11 [Bacillus megaterium DSM 319]
Length = 129
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 94/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +TITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIEAGVAHIRSTFNNTIVTITDVHGNAIAWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + ++GM +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKVSMDNGMKTLEVTVKGPGAGREAAIRALQAAGLEVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|95930498|ref|ZP_01313234.1| ribosomal protein S11 [Desulfuromonas acetoxidans DSM 684]
gi|95133538|gb|EAT15201.1| ribosomal protein S11 [Desulfuromonas acetoxidans DSM 684]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K ++ +++ +KNIV+G AH+ +TFNNT ++I D GN I+W++ GF GSRK+
Sbjct: 1 MAKPGKKVVRKSKAKKNIVNGVAHIQATFNNTIVSIADVSGNVISWATAGGSGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + + AQ HG+ ++EV V G G+GR+SALRAL++ G + I DVT I H
Sbjct: 61 TPFAAQVAAETAAKAAQEHGLRNVEVCVKGPGSGRESALRALQSAGLNVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|315093708|gb|EFT65684.1| 30S ribosomal protein S11 [Propionibacterium acnes HL060PA1]
Length = 135
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+++R +E+KN+V+G+AH+ STFNNT I ITDP G ++W+S VGF GSRK++PFAA
Sbjct: 10 PKTKVRRKEKKNVVAGQAHIKSTFNNTIIAITDPSGAVVSWASAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + +A HGM ++V V G G+GR++A+R+L A+G I I DVT + HNGCRP
Sbjct: 70 QMAAEAAGRRAMEHGMKRVDVFVKGPGSGRETAIRSLGAVGLEIGPISDVTPVPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|320526893|ref|ZP_08028083.1| 30S ribosomal protein S11 [Solobacterium moorei F0204]
gi|320132861|gb|EFW25401.1| 30S ribosomal protein S11 [Solobacterium moorei F0204]
Length = 134
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/126 (48%), Positives = 81/126 (64%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + + R+N+ G AH+ STFNNT +TI+D GN I+WSS +G+ GSRK++P+
Sbjct: 8 KGAVIRKKKARRNVAKGIAHIHSTFNNTIVTISDEAGNVISWSSAGALGYKGSRKSTPYV 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+ + A GM S+EV V G GAGR+SA+R+L+ G I I DVT I HNGCR
Sbjct: 68 AQLCAEAAGKAAVQQGMKSVEVNVKGPGAGRESAVRSLQTAGLEITVINDVTPIPHNGCR 127
Query: 123 PRKRRR 128
P KR R
Sbjct: 128 PPKRPR 133
>gi|283768438|ref|ZP_06341350.1| 30S ribosomal protein S11 [Bulleidia extructa W1219]
gi|283104830|gb|EFC06202.1| 30S ribosomal protein S11 [Bulleidia extructa W1219]
Length = 134
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/126 (47%), Positives = 81/126 (64%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + + R+N+ G AH+ STFNNT +TI+D GN +AWSS +G+ GSRK++P+
Sbjct: 8 KGAVTRKKKTRRNVAKGIAHIHSTFNNTIVTISDEAGNVVAWSSAGALGYKGSRKSTPYV 67
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+ + A GM S+EV V G GAGR++A+R+L+ G I I DVT I HNGCR
Sbjct: 68 AQLTAEAAGKAAVQQGMKSVEVNVKGPGAGREAAVRSLQTAGLNITVINDVTPIPHNGCR 127
Query: 123 PRKRRR 128
P KR R
Sbjct: 128 PPKRPR 133
>gi|184155966|ref|YP_001844306.1| 30S ribosomal protein S11 [Lactobacillus fermentum IFO 3956]
gi|227515512|ref|ZP_03945561.1| ribosomal protein S11 [Lactobacillus fermentum ATCC 14931]
gi|260662777|ref|ZP_05863671.1| 30S ribosomal protein S11 [Lactobacillus fermentum 28-3-CHN]
gi|226708380|sp|B2GDU4|RS11_LACF3 RecName: Full=30S ribosomal protein S11
gi|183227310|dbj|BAG27826.1| 30S ribosomal protein S11 [Lactobacillus fermentum IFO 3956]
gi|227086125|gb|EEI21437.1| ribosomal protein S11 [Lactobacillus fermentum ATCC 14931]
gi|260552858|gb|EEX25857.1| 30S ribosomal protein S11 [Lactobacillus fermentum 28-3-CHN]
Length = 129
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI +G AH+ STFNNT I ITD GN +AWSS V+GF GSRK++P
Sbjct: 1 MATKKGTRKRRVKKNIETGVAHIHSTFNNTLIMITDVQGNAVAWSSAGVLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + +A HGM ++EV+V G G+GR+SA+RAL+ G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKQAMEHGMKTVEVEVKGPGSGRESAIRALQTTGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|56418667|ref|YP_145985.1| 30S ribosomal protein S11 [Geobacillus kaustophilus HTA426]
gi|261417633|ref|YP_003251315.1| 30S ribosomal protein S11 [Geobacillus sp. Y412MC61]
gi|297528508|ref|YP_003669783.1| 30S ribosomal protein S11 [Geobacillus sp. C56-T3]
gi|319765291|ref|YP_004130792.1| 30S ribosomal protein S11 [Geobacillus sp. Y412MC52]
gi|62287364|sp|Q5L3R3|RS11_GEOKA RecName: Full=30S ribosomal protein S11
gi|56378509|dbj|BAD74417.1| 30S ribosomal protein S11 [Geobacillus kaustophilus HTA426]
gi|261374090|gb|ACX76833.1| 30S ribosomal protein S11 [Geobacillus sp. Y412MC61]
gi|297251760|gb|ADI25206.1| 30S ribosomal protein S11 [Geobacillus sp. C56-T3]
gi|317110157|gb|ADU92649.1| 30S ribosomal protein S11 [Geobacillus sp. Y412MC52]
Length = 129
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/129 (55%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R RKNI +G AH+ STFNNT +TITD HGN IAW+S +GF GSRK++P
Sbjct: 1 MARRTNTRKRRVRKNIDTGIAHIRSTFNNTIVTITDVHGNAIAWASAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT I HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|52078636|ref|YP_077427.1| 30S ribosomal protein S11 [Bacillus licheniformis ATCC 14580]
gi|52783998|ref|YP_089827.1| 30S ribosomal protein S11 [Bacillus licheniformis ATCC 14580]
gi|319649089|ref|ZP_08003297.1| 30S ribosomal protein S11 [Bacillus sp. BT1B_CT2]
gi|59798651|sp|Q65P80|RS11_BACLD RecName: Full=30S ribosomal protein S11
gi|52001847|gb|AAU21789.1| ribosomal protein S11 (BS11) [Bacillus licheniformis ATCC 14580]
gi|52346500|gb|AAU39134.1| RpsK [Bacillus licheniformis ATCC 14580]
gi|317388789|gb|EFV69608.1| 30S ribosomal protein S11 [Bacillus sp. BT1B_CT2]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI SG AH+ STFNNT +TITD HGN ++WSS +GF GS+K++PF
Sbjct: 4 ARKTNTRKRRVKKNIESGIAHIRSTFNNTIVTITDVHGNALSWSSAGALGFKGSKKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|258406161|ref|YP_003198903.1| 30S ribosomal protein S11 [Desulfohalobium retbaense DSM 5692]
gi|257798388|gb|ACV69325.1| 30S ribosomal protein S11 [Desulfohalobium retbaense DSM 5692]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/131 (48%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K R R + +KN+ G AH+ +TFNNT IT TD GN I+W++ + GF GS+K+
Sbjct: 1 MAKQKRRTVSRKKVKKNVPVGLAHIQATFNNTIITFTDMDGNVISWATSGMSGFKGSKKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + KAQ HGM S+ + V G G+GR+SA+RA+ + GF + I D+T I H
Sbjct: 61 TPYAAQIAAANAAKKAQEHGMRSVGILVKGPGSGRESAMRAINSAGFKVTFIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|254442359|ref|ZP_05055835.1| ribosomal protein S11, putative [Verrucomicrobiae bacterium DG1235]
gi|198256667|gb|EDY80975.1| ribosomal protein S11, putative [Verrucomicrobiae bacterium DG1235]
Length = 175
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/124 (48%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 7 RIRN-RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+IR + KN+ +G A V +TFNNT +TITD GNT++W+S + F GSRK++ +AAQ+
Sbjct: 52 KIRKAKGSKNVTAGIAKVSATFNNTIVTITDLKGNTVSWASAGKMNFRGSRKSTAYAAQI 111
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
T + + A HG+ + ++V G G GRDSA+RA + +G I SI D T I HNGCRP K
Sbjct: 112 VTQNAAKAAMAHGLKEVSIEVKGPGMGRDSAIRAFQTLGLEISSITDTTPIPHNGCRPPK 171
Query: 126 RRRI 129
RRR+
Sbjct: 172 RRRV 175
>gi|323344661|ref|ZP_08084885.1| 30S ribosomal protein S11 [Prevotella oralis ATCC 33269]
gi|323093931|gb|EFZ36508.1| 30S ribosomal protein S11 [Prevotella oralis ATCC 33269]
Length = 129
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKATSKKRNVRVDAVGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ G + I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVHGAGIEVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|260893346|ref|YP_003239443.1| 30S ribosomal protein S11 [Ammonifex degensii KC4]
gi|260865487|gb|ACX52593.1| 30S ribosomal protein S11 [Ammonifex degensii KC4]
Length = 128
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R + +ER+ + AH+ STFNNT +TITD GNTIAW+S VGF G+RK +P
Sbjct: 1 MARK-TRAKKKERRIVEKAVAHIKSTFNNTIVTITDLQGNTIAWASGGTVGFQGTRKGTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A +G+ + V V G G+GR++A+R+L+A G + I DVT + HNG
Sbjct: 60 FAAQLAAERAAKEAMEYGVREVAVLVKGPGSGREAAIRSLQAAGLQVSLIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|317503956|ref|ZP_07961964.1| 30S ribosomal protein S11 [Prevotella salivae DSM 15606]
gi|315664982|gb|EFV04641.1| 30S ribosomal protein S11 [Prevotella salivae DSM 15606]
Length = 129
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKATSKKRNVRVDAIGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A + G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKVAFDLGLRKVKAYVKGPGNGRESAIRAVNAAGIQVTEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|317054793|ref|YP_004103260.1| 30S ribosomal protein S11 [Ruminococcus albus 7]
gi|325678666|ref|ZP_08158276.1| 30S ribosomal protein S11 [Ruminococcus albus 8]
gi|315447062|gb|ADU20626.1| 30S ribosomal protein S11 [Ruminococcus albus 7]
gi|324109716|gb|EGC03922.1| 30S ribosomal protein S11 [Ruminococcus albus 8]
Length = 132
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M ++ + R RERKNI G+ H+ STFNNT +TITD GN I+W+S +GF GS+K
Sbjct: 1 MAQAKKKTTVRRRRERKNIEQGQVHIQSTFNNTIVTITDMQGNAISWASAGGLGFRGSKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ A + + A+ HG+ +EV V G GAGR++A+RAL++ + I DVT I
Sbjct: 61 STPFAAQTAAETAARAAKEHGLKVVEVFVKGPGAGREAAIRALQSEELEVRLIKDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|218289980|ref|ZP_03494157.1| ribosomal protein S11 [Alicyclobacillus acidocaldarius LAA1]
gi|258512644|ref|YP_003186078.1| 30S ribosomal protein S11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|218239965|gb|EED07152.1| ribosomal protein S11 [Alicyclobacillus acidocaldarius LAA1]
gi|257479370|gb|ACV59689.1| 30S ribosomal protein S11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 138
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/128 (55%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ +R R R+RKNI G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++P+
Sbjct: 11 SSTSARPRRRDRKNIEVGVAHIKSTFNNTIVSITDPAGNVISWASAGTVGFKGSRKSTPY 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM S+EV V G GAGR++A+R+L+A G I I DVT I HNGC
Sbjct: 71 AAQLAAEAAARSAMEHGMKSVEVLVKGPGAGREAAIRSLQAAGLEITGIRDVTPIPHNGC 130
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 131 RPPKRRRV 138
>gi|189347678|ref|YP_001944207.1| 30S ribosomal protein S11 [Chlorobium limicola DSM 245]
gi|226708342|sp|B3EGW5|RS11_CHLL2 RecName: Full=30S ribosomal protein S11
gi|189341825|gb|ACD91228.1| ribosomal protein S11 [Chlorobium limicola DSM 245]
Length = 127
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/121 (45%), Positives = 84/121 (69%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+QV ++
Sbjct: 7 KRKKVKVTPEGVVHIKASFNNVMVTITDVQGNTVSWSSAGKNGFRGSKKNTPYASQVTSE 66
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A + GM +++V + G GAGRD+A+RAL+ G + SI D+T + HNGCRP KRRR
Sbjct: 67 AAAKEAFDLGMRNVQVFIKGPGAGRDAAIRALQGAGLEVRSIRDITPLPHNGCRPPKRRR 126
Query: 129 I 129
+
Sbjct: 127 V 127
>gi|145225548|ref|YP_001136226.1| 30S ribosomal protein S11 [Mycobacterium gilvum PYR-GCK]
gi|315445900|ref|YP_004078779.1| 30S ribosomal protein S11P [Mycobacterium sp. Spyr1]
gi|189040422|sp|A4TEI1|RS11_MYCGI RecName: Full=30S ribosomal protein S11
gi|145218034|gb|ABP47438.1| SSU ribosomal protein S11P [Mycobacterium gilvum PYR-GCK]
gi|315264203|gb|ADU00945.1| SSU ribosomal protein S11P [Mycobacterium sp. Spyr1]
Length = 136
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/128 (53%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R RE+KN+ G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PF
Sbjct: 9 PKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPF 68
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 69 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAIADVTPQPHNGC 128
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 129 RPPKRRRV 136
>gi|281423814|ref|ZP_06254727.1| 30S ribosomal protein S11 [Prevotella oris F0302]
gi|299141172|ref|ZP_07034309.1| 30S ribosomal protein S11 [Prevotella oris C735]
gi|281402041|gb|EFB32872.1| 30S ribosomal protein S11 [Prevotella oris F0302]
gi|298577132|gb|EFI49001.1| 30S ribosomal protein S11 [Prevotella oris C735]
Length = 129
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R + G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKATSKKRNVRVDAIGQLHVHSSFNNIIVSLANSEGQVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A G+ ++ V G G GR+SA+RA+ A G + I DVT + HNG
Sbjct: 61 YAAQMAGEDCAKIAFELGLRKVKAYVKGPGNGRESAIRAVNAAGIQVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR++
Sbjct: 121 CRPPKRRKV 129
>gi|289450236|ref|YP_003475757.1| 30S ribosomal protein S11 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184783|gb|ADC91208.1| 30S ribosomal protein S11 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 133
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 1 MPKSPSR----IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ R + RERKN++SG AH+ S+FNNT +TITDP GN I+W+S +G GSR
Sbjct: 1 MAKTVKRGAARPKKRERKNVISGAAHIHSSFNNTIVTITDPAGNAISWASAGGMGMKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K +PFAAQ+A + + A +HGM ++EV V G G+GR+SA+RAL+A G + I DVT I
Sbjct: 61 KGTPFAAQMAAEQAAKTAADHGMKNVEVYVKGPGSGRESAIRALQAAGLEVTMIKDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 PHNGCRPPKRRRV 133
>gi|50955541|ref|YP_062829.1| 30S ribosomal protein S11 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|59798681|sp|Q6AD20|RS11_LEIXX RecName: Full=30S ribosomal protein S11
gi|50952023|gb|AAT89724.1| 30S ribosomal protein S11 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 132
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/127 (50%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ + R +E+KNI G+AH+ STFNNT ++ITD G ++W+S VGF GSRK++P+A
Sbjct: 6 SAARKPRKKEKKNIAVGQAHIKSTFNNTIVSITDTTGAVLSWASSGGVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGCR
Sbjct: 66 AQLAAESAARQAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSINDVTPQAHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|87124985|ref|ZP_01080832.1| 30S ribosomal protein S11 [Synechococcus sp. RS9917]
gi|86167305|gb|EAQ68565.1| 30S ribosomal protein S11 [Synechococcus sp. RS9917]
Length = 130
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTTGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|315186308|gb|EFU20069.1| SSU ribosomal protein S11P [Spirochaeta thermophila DSM 6578]
Length = 123
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 85/121 (70%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E++ + G+ ++ +TFNNT IT+TD +GN ++W+S +GF G++K++P+AAQV +
Sbjct: 3 KKKEKRTVHEGKVYIQATFNNTIITVTDMNGNCVSWASAGALGFRGAKKSTPYAAQVTAE 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA +HG+ V V G G GR++A+RA+ A+G + S+ D+T I HNGCRPRK RR
Sbjct: 63 TAVKKAMDHGLQEAHVYVKGPGVGREAAIRAIDALGVRVRSLHDITPIPHNGCRPRKARR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|50843285|ref|YP_056512.1| 30S ribosomal protein S11 [Propionibacterium acnes KPA171202]
gi|282855172|ref|ZP_06264504.1| 30S ribosomal protein S11 [Propionibacterium acnes J139]
gi|289424818|ref|ZP_06426600.1| 30S ribosomal protein S11 [Propionibacterium acnes SK187]
gi|289427736|ref|ZP_06429448.1| 30S ribosomal protein S11 [Propionibacterium acnes J165]
gi|295131354|ref|YP_003582017.1| 30S ribosomal protein S11 [Propionibacterium acnes SK137]
gi|59798677|sp|Q6A6Q9|RS11_PROAC RecName: Full=30S ribosomal protein S11
gi|50840887|gb|AAT83554.1| 30S ribosomal protein S11 [Propionibacterium acnes KPA171202]
gi|282581760|gb|EFB87145.1| 30S ribosomal protein S11 [Propionibacterium acnes J139]
gi|289154781|gb|EFD03464.1| 30S ribosomal protein S11 [Propionibacterium acnes SK187]
gi|289159227|gb|EFD07419.1| 30S ribosomal protein S11 [Propionibacterium acnes J165]
gi|291375834|gb|ADD99688.1| 30S ribosomal protein S11 [Propionibacterium acnes SK137]
gi|313763205|gb|EFS34569.1| 30S ribosomal protein S11 [Propionibacterium acnes HL013PA1]
gi|313773120|gb|EFS39086.1| 30S ribosomal protein S11 [Propionibacterium acnes HL074PA1]
gi|313793290|gb|EFS41348.1| 30S ribosomal protein S11 [Propionibacterium acnes HL110PA1]
gi|313801066|gb|EFS42334.1| 30S ribosomal protein S11 [Propionibacterium acnes HL110PA2]
gi|313808807|gb|EFS47261.1| 30S ribosomal protein S11 [Propionibacterium acnes HL087PA2]
gi|313810399|gb|EFS48113.1| 30S ribosomal protein S11 [Propionibacterium acnes HL083PA1]
gi|313812265|gb|EFS49979.1| 30S ribosomal protein S11 [Propionibacterium acnes HL025PA1]
gi|313816542|gb|EFS54256.1| 30S ribosomal protein S11 [Propionibacterium acnes HL059PA1]
gi|313817986|gb|EFS55700.1| 30S ribosomal protein S11 [Propionibacterium acnes HL046PA2]
gi|313819899|gb|EFS57613.1| 30S ribosomal protein S11 [Propionibacterium acnes HL036PA1]
gi|313823390|gb|EFS61104.1| 30S ribosomal protein S11 [Propionibacterium acnes HL036PA2]
gi|313824861|gb|EFS62575.1| 30S ribosomal protein S11 [Propionibacterium acnes HL063PA1]
gi|313828397|gb|EFS66111.1| 30S ribosomal protein S11 [Propionibacterium acnes HL063PA2]
gi|313832625|gb|EFS70339.1| 30S ribosomal protein S11 [Propionibacterium acnes HL056PA1]
gi|313837981|gb|EFS75695.1| 30S ribosomal protein S11 [Propionibacterium acnes HL086PA1]
gi|314914364|gb|EFS78195.1| 30S ribosomal protein S11 [Propionibacterium acnes HL005PA4]
gi|314917684|gb|EFS81515.1| 30S ribosomal protein S11 [Propionibacterium acnes HL050PA1]
gi|314919584|gb|EFS83415.1| 30S ribosomal protein S11 [Propionibacterium acnes HL050PA3]
gi|314924149|gb|EFS87980.1| 30S ribosomal protein S11 [Propionibacterium acnes HL001PA1]
gi|314925756|gb|EFS89587.1| 30S ribosomal protein S11 [Propionibacterium acnes HL036PA3]
gi|314930174|gb|EFS94005.1| 30S ribosomal protein S11 [Propionibacterium acnes HL067PA1]
gi|314957153|gb|EFT01257.1| 30S ribosomal protein S11 [Propionibacterium acnes HL027PA1]
gi|314957794|gb|EFT01897.1| 30S ribosomal protein S11 [Propionibacterium acnes HL002PA1]
gi|314960836|gb|EFT04937.1| 30S ribosomal protein S11 [Propionibacterium acnes HL002PA2]
gi|314963510|gb|EFT07610.1| 30S ribosomal protein S11 [Propionibacterium acnes HL082PA1]
gi|314964878|gb|EFT08977.1| 30S ribosomal protein S11 [Propionibacterium acnes HL082PA2]
gi|314969907|gb|EFT14005.1| 30S ribosomal protein S11 [Propionibacterium acnes HL037PA1]
gi|314973048|gb|EFT17144.1| 30S ribosomal protein S11 [Propionibacterium acnes HL053PA1]
gi|314975544|gb|EFT19639.1| 30S ribosomal protein S11 [Propionibacterium acnes HL045PA1]
gi|314979767|gb|EFT23861.1| 30S ribosomal protein S11 [Propionibacterium acnes HL072PA2]
gi|314982286|gb|EFT26379.1| 30S ribosomal protein S11 [Propionibacterium acnes HL110PA3]
gi|314984827|gb|EFT28919.1| 30S ribosomal protein S11 [Propionibacterium acnes HL005PA1]
gi|314986086|gb|EFT30178.1| 30S ribosomal protein S11 [Propionibacterium acnes HL005PA2]
gi|314988701|gb|EFT32792.1| 30S ribosomal protein S11 [Propionibacterium acnes HL005PA3]
gi|315077131|gb|EFT49198.1| 30S ribosomal protein S11 [Propionibacterium acnes HL053PA2]
gi|315079818|gb|EFT51794.1| 30S ribosomal protein S11 [Propionibacterium acnes HL078PA1]
gi|315083185|gb|EFT55161.1| 30S ribosomal protein S11 [Propionibacterium acnes HL027PA2]
gi|315086861|gb|EFT58837.1| 30S ribosomal protein S11 [Propionibacterium acnes HL002PA3]
gi|315089953|gb|EFT61929.1| 30S ribosomal protein S11 [Propionibacterium acnes HL072PA1]
gi|315090475|gb|EFT62451.1| 30S ribosomal protein S11 [Propionibacterium acnes HL110PA4]
gi|315096725|gb|EFT68701.1| 30S ribosomal protein S11 [Propionibacterium acnes HL038PA1]
gi|315097953|gb|EFT69929.1| 30S ribosomal protein S11 [Propionibacterium acnes HL059PA2]
gi|315100596|gb|EFT72572.1| 30S ribosomal protein S11 [Propionibacterium acnes HL046PA1]
gi|315104000|gb|EFT75976.1| 30S ribosomal protein S11 [Propionibacterium acnes HL050PA2]
gi|315106039|gb|EFT78015.1| 30S ribosomal protein S11 [Propionibacterium acnes HL030PA1]
gi|315109199|gb|EFT81175.1| 30S ribosomal protein S11 [Propionibacterium acnes HL030PA2]
gi|327325139|gb|EGE66945.1| 30S ribosomal protein S11 [Propionibacterium acnes HL096PA3]
gi|327325232|gb|EGE67037.1| 30S ribosomal protein S11 [Propionibacterium acnes HL096PA2]
gi|327325528|gb|EGE67327.1| 30S ribosomal protein S11 [Propionibacterium acnes HL103PA1]
gi|327332741|gb|EGE74475.1| 30S ribosomal protein S11 [Propionibacterium acnes HL097PA1]
gi|327444032|gb|EGE90686.1| 30S ribosomal protein S11 [Propionibacterium acnes HL043PA1]
gi|327449340|gb|EGE95994.1| 30S ribosomal protein S11 [Propionibacterium acnes HL013PA2]
gi|327449432|gb|EGE96086.1| 30S ribosomal protein S11 [Propionibacterium acnes HL043PA2]
gi|327451454|gb|EGE98108.1| 30S ribosomal protein S11 [Propionibacterium acnes HL087PA3]
gi|327451571|gb|EGE98225.1| 30S ribosomal protein S11 [Propionibacterium acnes HL092PA1]
gi|327451858|gb|EGE98512.1| 30S ribosomal protein S11 [Propionibacterium acnes HL083PA2]
gi|328752072|gb|EGF65688.1| 30S ribosomal protein S11 [Propionibacterium acnes HL087PA1]
gi|328755530|gb|EGF69146.1| 30S ribosomal protein S11 [Propionibacterium acnes HL025PA2]
gi|328756315|gb|EGF69931.1| 30S ribosomal protein S11 [Propionibacterium acnes HL020PA1]
gi|328761351|gb|EGF74878.1| 30S ribosomal protein S11 [Propionibacterium acnes HL099PA1]
Length = 135
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+++R +E+KN+V+G+AH+ STFNNT I ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 PKTKVRRKEKKNVVAGQAHIKSTFNNTIIAITDPSGAVISWASAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + +A HGM ++V V G G+GR++A+R+L A+G I I DVT + HNGCRP
Sbjct: 70 QMAAEAAGRRAMEHGMKRVDVFVKGPGSGRETAIRSLGAVGLEIGPISDVTPVPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|296168683|ref|ZP_06850432.1| 30S ribosomal protein S11 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896592|gb|EFG76233.1| 30S ribosomal protein S11 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 138
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 92/124 (74%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ R RE+KNI G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PFAAQ+
Sbjct: 15 QKTRKREKKNIPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPFAAQL 74
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP K
Sbjct: 75 AAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGCRPPK 134
Query: 126 RRRI 129
RRR+
Sbjct: 135 RRRV 138
>gi|114567814|ref|YP_754968.1| 30S ribosomal protein S11 [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317308|sp|Q0AUK7|RS11_SYNWW RecName: Full=30S ribosomal protein S11
gi|114338749|gb|ABI69597.1| SSU ribosomal protein S11P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 130
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/118 (55%), Positives = 85/118 (72%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
E+KNI G AH+ STFNNT I+ITD HGN I+WSS +GF GSRK++PFAAQ A ++ +
Sbjct: 13 EKKNIEHGIAHIKSTFNNTIISITDRHGNAISWSSAGTIGFKGSRKSTPFAAQQAAENAA 72
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A HG+ +E V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 73 KAAMEHGLKEVECYVKGPGAGREAAIRSLQAAGLEVSVIKDVTPIPHNGCRPPKRRRV 130
>gi|312889342|ref|ZP_07748896.1| SSU ribosomal protein S11P [Mucilaginibacter paludis DSM 18603]
gi|311298219|gb|EFQ75334.1| SSU ribosomal protein S11P [Mucilaginibacter paludis DSM 18603]
Length = 129
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R G AH+ +TFNN IT+T+ +G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTKKVTKKRIVIVEPIGEAHINATFNNIIITLTNKNGQAISWSSAGKMGFKGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA A DC A + G+ +EV V G G+GR+SA+R L+ G + +I D+T + HNG
Sbjct: 61 YAAGQAASDCGKTAYDLGLRKVEVFVKGPGSGRESAIRTLQTAGIEVTTIKDITPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPSKRRRV 129
>gi|54022802|ref|YP_117044.1| 30S ribosomal protein S11 [Nocardia farcinica IFM 10152]
gi|59798618|sp|Q5Z1L1|RS11_NOCFA RecName: Full=30S ribosomal protein S11
gi|54014310|dbj|BAD55680.1| putative ribosomal protein S11 [Nocardia farcinica IFM 10152]
Length = 137
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 95/128 (74%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R R++KN+ G AH+ STFNNT ++ITDP+GN I+W+S VGF GSRK++PF
Sbjct: 10 PKKTQKSRRRDKKNVPHGNAHIKSTFNNTIVSITDPNGNVISWASSGHVGFKGSRKSTPF 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 70 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 129
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 130 RPPKRRRV 137
>gi|269128487|ref|YP_003301857.1| 30S ribosomal protein S11 [Thermomonospora curvata DSM 43183]
gi|268313445|gb|ACY99819.1| ribosomal protein S11 [Thermomonospora curvata DSM 43183]
Length = 133
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KNI G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAAQ
Sbjct: 9 AKKVRRKEKKNIAHGHAHIKSTFNNTIVSITDPQGNVISWASAGHVGFKGSRKSTPFAAQ 68
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
A + + +A HGM ++V V G G+GR++A+R+L+A G + SI DVT + HNGCRP
Sbjct: 69 QAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPVPHNGCRPP 128
Query: 125 KRRRI 129
KRRR+
Sbjct: 129 KRRRV 133
>gi|322381102|ref|ZP_08055105.1| 30S ribosomal protein S11-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154678|gb|EFX46949.1| 30S ribosomal protein S11-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 131
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/128 (56%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 AKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGNLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM +EV V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 64 AAQMAAETAAKAAMEHGMKVVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|218895271|ref|YP_002443682.1| ribosomal protein S11 [Bacillus cereus G9842]
gi|228898889|ref|ZP_04063171.1| 30S ribosomal protein S11 [Bacillus thuringiensis IBL 4222]
gi|228905933|ref|ZP_04069830.1| 30S ribosomal protein S11 [Bacillus thuringiensis IBL 200]
gi|228937439|ref|ZP_04100085.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228963236|ref|ZP_04124405.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228970325|ref|ZP_04130984.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976895|ref|ZP_04137307.1| 30S ribosomal protein S11 [Bacillus thuringiensis Bt407]
gi|229015537|ref|ZP_04172534.1| 30S ribosomal protein S11 [Bacillus cereus AH1273]
gi|229021747|ref|ZP_04178328.1| 30S ribosomal protein S11 [Bacillus cereus AH1272]
gi|229027984|ref|ZP_04184137.1| 30S ribosomal protein S11 [Bacillus cereus AH1271]
gi|229074197|ref|ZP_04207243.1| 30S ribosomal protein S11 [Bacillus cereus Rock4-18]
gi|229094858|ref|ZP_04225863.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-29]
gi|229100935|ref|ZP_04231739.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-28]
gi|229113812|ref|ZP_04243247.1| 30S ribosomal protein S11 [Bacillus cereus Rock1-3]
gi|229170987|ref|ZP_04298588.1| 30S ribosomal protein S11 [Bacillus cereus MM3]
gi|226708328|sp|B7IT45|RS11_BACC2 RecName: Full=30S ribosomal protein S11
gi|218541168|gb|ACK93562.1| ribosomal protein S11 [Bacillus cereus G9842]
gi|228612527|gb|EEK69748.1| 30S ribosomal protein S11 [Bacillus cereus MM3]
gi|228669683|gb|EEL25090.1| 30S ribosomal protein S11 [Bacillus cereus Rock1-3]
gi|228682514|gb|EEL36587.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-28]
gi|228688601|gb|EEL42474.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-29]
gi|228708967|gb|EEL61094.1| 30S ribosomal protein S11 [Bacillus cereus Rock4-18]
gi|228733372|gb|EEL84201.1| 30S ribosomal protein S11 [Bacillus cereus AH1271]
gi|228739556|gb|EEL89971.1| 30S ribosomal protein S11 [Bacillus cereus AH1272]
gi|228745760|gb|EEL95765.1| 30S ribosomal protein S11 [Bacillus cereus AH1273]
gi|228782865|gb|EEM31031.1| 30S ribosomal protein S11 [Bacillus thuringiensis Bt407]
gi|228789434|gb|EEM37354.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796494|gb|EEM43933.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228822272|gb|EEM68254.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228853748|gb|EEM98508.1| 30S ribosomal protein S11 [Bacillus thuringiensis IBL 200]
gi|228860789|gb|EEN05167.1| 30S ribosomal protein S11 [Bacillus thuringiensis IBL 4222]
gi|326937931|gb|AEA13827.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 129
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGIAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKVAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|30018405|ref|NP_830036.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 14579]
gi|206972246|ref|ZP_03233193.1| 30S ribosomal protein S11 [Bacillus cereus AH1134]
gi|218231984|ref|YP_002364985.1| 30S ribosomal protein S11 [Bacillus cereus B4264]
gi|228919086|ref|ZP_04082465.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950684|ref|ZP_04112818.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228956577|ref|ZP_04118373.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229041041|ref|ZP_04189804.1| 30S ribosomal protein S11 [Bacillus cereus AH676]
gi|229067901|ref|ZP_04201218.1| 30S ribosomal protein S11 [Bacillus cereus F65185]
gi|229077436|ref|ZP_04210087.1| 30S ribosomal protein S11 [Bacillus cereus Rock4-2]
gi|229107822|ref|ZP_04237458.1| 30S ribosomal protein S11 [Bacillus cereus Rock1-15]
gi|229125653|ref|ZP_04254685.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-Cer4]
gi|229142942|ref|ZP_04271383.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST24]
gi|229148545|ref|ZP_04276801.1| 30S ribosomal protein S11 [Bacillus cereus m1550]
gi|229159309|ref|ZP_04287333.1| 30S ribosomal protein S11 [Bacillus cereus R309803]
gi|229176736|ref|ZP_04304140.1| 30S ribosomal protein S11 [Bacillus cereus 172560W]
gi|229188421|ref|ZP_04315469.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 10876]
gi|296500969|ref|YP_003662669.1| 30S ribosomal protein S11 [Bacillus thuringiensis BMB171]
gi|34925196|sp|Q81J19|RS11_BACCR RecName: Full=30S ribosomal protein S11
gi|226708329|sp|B7HJ74|RS11_BACC4 RecName: Full=30S ribosomal protein S11
gi|29893945|gb|AAP07237.1| SSU ribosomal protein S11P [Bacillus cereus ATCC 14579]
gi|206732820|gb|EDZ49995.1| 30S ribosomal protein S11 [Bacillus cereus AH1134]
gi|218159941|gb|ACK59933.1| ribosomal protein S11 [Bacillus cereus B4264]
gi|228595095|gb|EEK52866.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 10876]
gi|228606779|gb|EEK64196.1| 30S ribosomal protein S11 [Bacillus cereus 172560W]
gi|228624201|gb|EEK81003.1| 30S ribosomal protein S11 [Bacillus cereus R309803]
gi|228634961|gb|EEK91534.1| 30S ribosomal protein S11 [Bacillus cereus m1550]
gi|228640563|gb|EEK96952.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST24]
gi|228657845|gb|EEL13651.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-Cer4]
gi|228675671|gb|EEL30879.1| 30S ribosomal protein S11 [Bacillus cereus Rock1-15]
gi|228705886|gb|EEL58221.1| 30S ribosomal protein S11 [Bacillus cereus Rock4-2]
gi|228715260|gb|EEL67119.1| 30S ribosomal protein S11 [Bacillus cereus F65185]
gi|228727338|gb|EEL78532.1| 30S ribosomal protein S11 [Bacillus cereus AH676]
gi|228803142|gb|EEM49964.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809035|gb|EEM55520.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840611|gb|EEM85873.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296322021|gb|ADH04949.1| 30S ribosomal protein S11 [Bacillus thuringiensis BMB171]
Length = 129
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGIAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|23097599|ref|NP_691065.1| 30S ribosomal protein S11 [Oceanobacillus iheyensis HTE831]
gi|48474281|sp|P59373|RS11_OCEIH RecName: Full=30S ribosomal protein S11
gi|22775822|dbj|BAC12100.1| 30S ribosomal protein S11 [Oceanobacillus iheyensis HTE831]
Length = 129
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT +TITD GN I WSS +GF GS+K++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTRGNAIGWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +LEV V G GAGR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKSAIENGMKTLEVTVKGPGAGREAAIRSLQAAGLEVTAIVDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|30260327|ref|NP_842704.1| 30S ribosomal protein S11 [Bacillus anthracis str. Ames]
gi|42779217|ref|NP_976464.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 10987]
gi|47525392|ref|YP_016741.1| 30S ribosomal protein S11 [Bacillus anthracis str. 'Ames Ancestor']
gi|47570248|ref|ZP_00240899.1| ribosomal protein S11 [Bacillus cereus G9241]
gi|49183170|ref|YP_026422.1| 30S ribosomal protein S11 [Bacillus anthracis str. Sterne]
gi|49481684|ref|YP_034487.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145082|ref|YP_081746.1| 30S ribosomal protein S11 [Bacillus cereus E33L]
gi|118475904|ref|YP_893055.1| 30S ribosomal protein S11 [Bacillus thuringiensis str. Al Hakam]
gi|167642079|ref|ZP_02400303.1| ribosomal protein S11 [Bacillus anthracis str. A0193]
gi|177656191|ref|ZP_02937172.1| ribosomal protein S11 [Bacillus anthracis str. A0174]
gi|190567347|ref|ZP_03020261.1| ribosomal protein S11 [Bacillus anthracis Tsiankovskii-I]
gi|217957711|ref|YP_002336255.1| 30S ribosomal protein S11 [Bacillus cereus AH187]
gi|218901341|ref|YP_002449175.1| ribosomal protein S11 [Bacillus cereus AH820]
gi|222093906|ref|YP_002527956.1| 30S ribosomal protein s11 [Bacillus cereus Q1]
gi|225862188|ref|YP_002747566.1| 30S ribosomal protein S11 [Bacillus cereus 03BB102]
gi|227812809|ref|YP_002812818.1| 30S ribosomal protein S11 [Bacillus anthracis str. CDC 684]
gi|228912875|ref|ZP_04076522.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925389|ref|ZP_04088485.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931638|ref|ZP_04094544.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943941|ref|ZP_04106326.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228983391|ref|ZP_04143604.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089267|ref|ZP_04220548.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-42]
gi|229119798|ref|ZP_04249059.1| 30S ribosomal protein S11 [Bacillus cereus 95/8201]
gi|229136982|ref|ZP_04265609.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST26]
gi|229182530|ref|ZP_04309781.1| 30S ribosomal protein S11 [Bacillus cereus BGSC 6E1]
gi|229194526|ref|ZP_04321329.1| 30S ribosomal protein S11 [Bacillus cereus m1293]
gi|229603603|ref|YP_002864787.1| 30S ribosomal protein S11 [Bacillus anthracis str. A0248]
gi|254686635|ref|ZP_05150494.1| 30S ribosomal protein S11 [Bacillus anthracis str. CNEVA-9066]
gi|254726285|ref|ZP_05188067.1| 30S ribosomal protein S11 [Bacillus anthracis str. A1055]
gi|254735290|ref|ZP_05192998.1| 30S ribosomal protein S11 [Bacillus anthracis str. Western North
America USA6153]
gi|254739482|ref|ZP_05197180.1| 30S ribosomal protein S11 [Bacillus anthracis str. Kruger B]
gi|254751246|ref|ZP_05203284.1| 30S ribosomal protein S11 [Bacillus anthracis str. Vollum]
gi|254756845|ref|ZP_05208873.1| 30S ribosomal protein S11 [Bacillus anthracis str. Australia 94]
gi|300119551|ref|ZP_07057095.1| 30S ribosomal protein S11 [Bacillus cereus SJ1]
gi|301051873|ref|YP_003790084.1| 30S ribosomal protein S11 [Bacillus anthracis CI]
gi|34925199|sp|Q81VQ5|RS11_BACAN RecName: Full=30S ribosomal protein S11
gi|59798640|sp|Q63H65|RS11_BACCZ RecName: Full=30S ribosomal protein S11
gi|59798715|sp|Q6HPN3|RS11_BACHK RecName: Full=30S ribosomal protein S11
gi|59798783|sp|Q73F70|RS11_BACC1 RecName: Full=30S ribosomal protein S11
gi|152060575|sp|A0R8K5|RS11_BACAH RecName: Full=30S ribosomal protein S11
gi|226708327|sp|B7JKE6|RS11_BACC0 RecName: Full=30S ribosomal protein S11
gi|226708330|sp|B7HQX0|RS11_BACC7 RecName: Full=30S ribosomal protein S11
gi|254765363|sp|C3P9T1|RS11_BACAA RecName: Full=30S ribosomal protein S11
gi|254765364|sp|C3LJX0|RS11_BACAC RecName: Full=30S ribosomal protein S11
gi|254765365|sp|C1ET65|RS11_BACC3 RecName: Full=30S ribosomal protein S11
gi|254765366|sp|B9IZM0|RS11_BACCQ RecName: Full=30S ribosomal protein S11
gi|30253648|gb|AAP24190.1| 30S ribosomal protein S11 [Bacillus anthracis str. Ames]
gi|42735132|gb|AAS39072.1| ribosomal protein S11 [Bacillus cereus ATCC 10987]
gi|47500540|gb|AAT29216.1| ribosomal protein S11 [Bacillus anthracis str. 'Ames Ancestor']
gi|47553072|gb|EAL11472.1| ribosomal protein S11 [Bacillus cereus G9241]
gi|49177097|gb|AAT52473.1| ribosomal protein S11 [Bacillus anthracis str. Sterne]
gi|49333240|gb|AAT63886.1| ribosomal protein S11 (30A ribosomal protein S11) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978551|gb|AAU20101.1| ribosomal protein S11 (30A ribosomal protein S11) [Bacillus cereus
E33L]
gi|118415129|gb|ABK83548.1| SSU ribosomal protein S11P [Bacillus thuringiensis str. Al Hakam]
gi|167509966|gb|EDR85388.1| ribosomal protein S11 [Bacillus anthracis str. A0193]
gi|172079839|gb|EDT64953.1| ribosomal protein S11 [Bacillus anthracis str. A0174]
gi|190561474|gb|EDV15445.1| ribosomal protein S11 [Bacillus anthracis Tsiankovskii-I]
gi|217063612|gb|ACJ77862.1| ribosomal protein S11 [Bacillus cereus AH187]
gi|218537606|gb|ACK90004.1| ribosomal protein S11 [Bacillus cereus AH820]
gi|221237954|gb|ACM10664.1| ribosomal protein S11 (30A ribosomal protein S11) [Bacillus cereus
Q1]
gi|225790679|gb|ACO30896.1| 30S ribosomal protein S11 [Bacillus cereus 03BB102]
gi|227005304|gb|ACP15047.1| 30S ribosomal protein S11 [Bacillus anthracis str. CDC 684]
gi|228588992|gb|EEK47007.1| 30S ribosomal protein S11 [Bacillus cereus m1293]
gi|228600985|gb|EEK58554.1| 30S ribosomal protein S11 [Bacillus cereus BGSC 6E1]
gi|228646520|gb|EEL02727.1| 30S ribosomal protein S11 [Bacillus cereus BDRD-ST26]
gi|228663699|gb|EEL19278.1| 30S ribosomal protein S11 [Bacillus cereus 95/8201]
gi|228694106|gb|EEL47788.1| 30S ribosomal protein S11 [Bacillus cereus Rock3-42]
gi|228776381|gb|EEM24734.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815774|gb|EEM62010.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228828066|gb|EEM73794.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834311|gb|EEM79852.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846811|gb|EEM91816.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268011|gb|ACQ49648.1| 30S ribosomal protein S11 [Bacillus anthracis str. A0248]
gi|298723023|gb|EFI63921.1| 30S ribosomal protein S11 [Bacillus cereus SJ1]
gi|300374042|gb|ADK02946.1| 30S ribosomal protein S11 [Bacillus cereus biovar anthracis str.
CI]
gi|324324127|gb|ADY19387.1| 30S ribosomal protein S11 [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 129
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGVAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|304321463|ref|YP_003855106.1| 30S ribosomal protein S11 [Parvularcula bermudensis HTCC2503]
gi|303300365|gb|ADM09964.1| 30S ribosomal protein S11 [Parvularcula bermudensis HTCC2503]
Length = 131
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/131 (56%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P R +R RERKNIV+G HV ++FNNT +TITD GN ++WSS +GF GSRK+
Sbjct: 1 MARQPQRQAVRRRERKNIVNGVVHVNASFNNTMVTITDEQGNAVSWSSAGHMGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A +D + KA +HG+ S++V V G G+GR+SALRAL++ G T+ +I DVT I H
Sbjct: 61 TPFAAQMAAEDAAKKAMDHGLKSVDVLVRGPGSGRESALRALQSAGLTVTNIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NG RPRKRRR+
Sbjct: 121 NGVRPRKRRRV 131
>gi|212550428|ref|YP_002308745.1| 30S ribosomal protein S11 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226708326|sp|B6YQ62|RS11_AZOPC RecName: Full=30S ribosomal protein S11
gi|212548666|dbj|BAG83334.1| 30S ribosomal protein S11 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 129
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R K V G+ H+ S+FNN +TIT+ G I+WSS +GF S+KN+P
Sbjct: 1 MAKRTVATKKRVVKVDVKGQLHIHSSFNNIIVTITNDEGQVISWSSSGKMGFRSSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + GM ++ V G G GR+SA+R + +G + I DVT + HNG
Sbjct: 61 YAAQMAAQDCAKVAYDLGMRKVKAYVKGPGNGRESAIRMVHNVGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K RR+
Sbjct: 121 CRPPKGRRV 129
>gi|187932569|ref|YP_001884500.1| 30S ribosomal protein S11 [Clostridium botulinum B str. Eklund 17B]
gi|188587566|ref|YP_001919699.1| 30S ribosomal protein S11 [Clostridium botulinum E3 str. Alaska
E43]
gi|251780740|ref|ZP_04823660.1| 30S ribosomal protein S11 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|187720722|gb|ACD21943.1| 30S ribosomal protein S11 [Clostridium botulinum B str. Eklund 17B]
gi|188497847|gb|ACD50983.1| 30S ribosomal protein S11 [Clostridium botulinum E3 str. Alaska
E43]
gi|243085055|gb|EES50945.1| 30S ribosomal protein S11 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 130
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 16 NVEHGAAHIKSTFNNSIVTLTDAVGNALSWSSAGALGFRGSRKSTPFAAQMAAETAAKSA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 76 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 130
>gi|323357347|ref|YP_004223743.1| ribosomal protein S11 [Microbacterium testaceum StLB037]
gi|323273718|dbj|BAJ73863.1| ribosomal protein S11 [Microbacterium testaceum StLB037]
Length = 132
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/132 (49%), Positives = 93/132 (70%), Gaps = 3/132 (2%)
Query: 1 MPKSP---SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M ++ + R +E+KNI G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK
Sbjct: 1 MAQAKSAARKPRRKEKKNIAVGQAHIKSTFNNTIVSITDPSGAVISWASSGGVGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++P+AA +A + + +AQ HG+ ++V V G G+GR++A+R+L A G + SI DVT A
Sbjct: 61 STPYAAGMAAESAARQAQEHGVKKVDVFVKGPGSGRETAIRSLTAAGLEVGSIQDVTPQA 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|308172033|ref|YP_003918738.1| 30S ribosomal protein S11 (BS11) [Bacillus amyloliquefaciens DSM 7]
gi|307604897|emb|CBI41268.1| ribosomal protein S11 (BS11) [Bacillus amyloliquefaciens DSM 7]
gi|328551843|gb|AEB22335.1| 30S ribosomal protein S11 [Bacillus amyloliquefaciens TA208]
Length = 131
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI SG AH+ STFNNT +TITD HGN I+WSS +GF GSRK++PF
Sbjct: 4 ARKQNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|15639204|ref|NP_218651.1| 30S ribosomal protein S11 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025445|ref|YP_001933217.1| 30S ribosomal protein S11 [Treponema pallidum subsp. pallidum SS14]
gi|6094149|sp|O83241|RS11_TREPA RecName: Full=30S ribosomal protein S11
gi|226708430|sp|B2S2F9|RS11_TREPS RecName: Full=30S ribosomal protein S11
gi|3322480|gb|AAC65200.1| ribosomal protein S11 (rpsK) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018020|gb|ACD70638.1| ribosomal protein S11 [Treponema pallidum subsp. pallidum SS14]
gi|291059616|gb|ADD72351.1| 30S ribosomal protein S11 [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 126
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/121 (47%), Positives = 82/121 (67%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +E+KN+ G ++ +TFNNT IT+TD GN ++W+S +GF+G++K++PFAAQ +
Sbjct: 6 KRKEKKNVYEGNVYIQATFNNTIITVTDLQGNALSWASSGGLGFNGAKKSTPFAAQTVAE 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KAQ G+ + V V G G GR+SA+R L +G + SI D+T I HNGCRPRK RR
Sbjct: 66 AAVQKAQQCGLREVHVFVKGPGIGRESAIRMLGTMGLRVRSIRDITPIPHNGCRPRKTRR 125
Query: 129 I 129
I
Sbjct: 126 I 126
>gi|297582476|ref|YP_003698256.1| 30S ribosomal protein S11 [Bacillus selenitireducens MLS10]
gi|297140933|gb|ADH97690.1| 30S ribosomal protein S11 [Bacillus selenitireducens MLS10]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R + R+RKNI SG AH+ STFNNT +TITD GN I+W+S +GF GSRK++
Sbjct: 1 MAKPKTTRQKRRQRKNIESGVAHIRSTFNNTIVTITDTQGNAISWASAGALGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A HGM ++ V V G GAGR++A+R+L+A G + I DVT + HN
Sbjct: 61 PFAAQTAAETAAKAAMEHGMKTVVVSVKGPGAGREAAIRSLQAAGLEVNMIKDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|256831852|ref|YP_003160579.1| 30S ribosomal protein S11 [Jonesia denitrificans DSM 20603]
gi|256685383|gb|ACV08276.1| ribosomal protein S11 [Jonesia denitrificans DSM 20603]
Length = 135
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+S + R +++KNI G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P+
Sbjct: 8 AQSARKPRRKDKKNISVGQAHIKSTFNNTIVSITDPSGAVISWASSGQVGFKGSRKSTPY 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGC
Sbjct: 68 AAQLAAESAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPQAHNGC 127
Query: 122 RPRKRRRI 129
R KRRR+
Sbjct: 128 RQPKRRRV 135
>gi|254495735|ref|ZP_05108650.1| 30S ribosomal protein S11 [Legionella drancourtii LLAP12]
gi|270157888|ref|ZP_06186545.1| ribosomal protein S11 [Legionella longbeachae D-4968]
gi|289163853|ref|YP_003453991.1| 30S ribosomal protein S11 [Legionella longbeachae NSW150]
gi|254355048|gb|EET13668.1| 30S ribosomal protein S11 [Legionella drancourtii LLAP12]
gi|269989913|gb|EEZ96167.1| ribosomal protein S11 [Legionella longbeachae D-4968]
gi|288857026|emb|CBJ10840.1| 30S ribosomal protein S11 [Legionella longbeachae NSW150]
Length = 132
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 83/127 (65%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++R + ++ + G HV ++FNNT +T TD GN + W++ GF GSRK++P+A
Sbjct: 6 SKQQKVRKKAKRVVSDGIVHVHASFNNTIVTFTDRQGNALCWATSGGSGFRGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQVAT+ +A A+ +GM S+ V V G G GR+S +R L + F IV I DVT I HNGC+
Sbjct: 66 AQVATERAAAVAKEYGMKSVAVFVHGPGPGRESTIRELISQDFKIVEITDVTGIPHNGCK 125
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 126 PPKKRRV 132
>gi|315122795|ref|YP_004063284.1| 30S ribosomal protein S11 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496197|gb|ADR52796.1| 30S ribosomal protein S11 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 129
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 125/129 (96%), Positives = 127/129 (98%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MPKSP+R+RNRERKNIVSG AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP
Sbjct: 1 MPKSPARVRNRERKNIVSGCAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG
Sbjct: 61 FAAQVAADDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRRI
Sbjct: 121 CRPRKRRRI 129
>gi|29831495|ref|NP_826129.1| 30S ribosomal protein S11 [Streptomyces avermitilis MA-4680]
gi|182436601|ref|YP_001824320.1| 30S ribosomal protein S11 [Streptomyces griseus subsp. griseus NBRC
13350]
gi|239929488|ref|ZP_04686441.1| 30S ribosomal protein S11 [Streptomyces ghanaensis ATCC 14672]
gi|239943603|ref|ZP_04695540.1| 30S ribosomal protein S11 [Streptomyces roseosporus NRRL 15998]
gi|239990056|ref|ZP_04710720.1| 30S ribosomal protein S11 [Streptomyces roseosporus NRRL 11379]
gi|254383146|ref|ZP_04998500.1| 30S ribosomal protein S11 [Streptomyces sp. Mg1]
gi|254391367|ref|ZP_05006570.1| 30S ribosomal protein S11 [Streptomyces clavuligerus ATCC 27064]
gi|282860837|ref|ZP_06269903.1| ribosomal protein S11 [Streptomyces sp. ACTE]
gi|290958125|ref|YP_003489307.1| 30S ribosomal protein S11 [Streptomyces scabiei 87.22]
gi|291437813|ref|ZP_06577203.1| 30S ribosomal protein S11 [Streptomyces ghanaensis ATCC 14672]
gi|291447070|ref|ZP_06586460.1| 30S ribosomal protein S11 [Streptomyces roseosporus NRRL 15998]
gi|294630919|ref|ZP_06709479.1| 30S ribosomal protein S11 [Streptomyces sp. e14]
gi|294814493|ref|ZP_06773136.1| 30S ribosomal protein S11 [Streptomyces clavuligerus ATCC 27064]
gi|297192677|ref|ZP_06910075.1| 30S ribosomal protein S11 [Streptomyces pristinaespiralis ATCC
25486]
gi|297201755|ref|ZP_06919152.1| 30S ribosomal protein S11 [Streptomyces sviceus ATCC 29083]
gi|302536277|ref|ZP_07288619.1| 30S ribosomal protein S11 [Streptomyces sp. C]
gi|302553568|ref|ZP_07305910.1| 30S ribosomal protein S11 [Streptomyces viridochromogenes DSM
40736]
gi|326442882|ref|ZP_08217616.1| 30S ribosomal protein S11 [Streptomyces clavuligerus ATCC 27064]
gi|326777223|ref|ZP_08236488.1| 30S ribosomal protein S11 [Streptomyces cf. griseus XylebKG-1]
gi|34925208|sp|Q82DM3|RS11_STRAW RecName: Full=30S ribosomal protein S11
gi|226708419|sp|B1W3Y1|RS11_STRGG RecName: Full=30S ribosomal protein S11
gi|29608611|dbj|BAC72664.1| putative ribosomal protein S11 [Streptomyces avermitilis MA-4680]
gi|178465117|dbj|BAG19637.1| putative 30S ribosomal protein S11 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|194342045|gb|EDX23011.1| 30S ribosomal protein S11 [Streptomyces sp. Mg1]
gi|197705057|gb|EDY50869.1| 30S ribosomal protein S11 [Streptomyces clavuligerus ATCC 27064]
gi|197710870|gb|EDY54904.1| 30S ribosomal protein S11 [Streptomyces sviceus ATCC 29083]
gi|197721668|gb|EDY65576.1| 30S ribosomal protein S11 [Streptomyces pristinaespiralis ATCC
25486]
gi|260647651|emb|CBG70756.1| 30S ribosomal protein S11 [Streptomyces scabiei 87.22]
gi|282564573|gb|EFB70109.1| ribosomal protein S11 [Streptomyces sp. ACTE]
gi|291340708|gb|EFE67664.1| 30S ribosomal protein S11 [Streptomyces ghanaensis ATCC 14672]
gi|291350017|gb|EFE76921.1| 30S ribosomal protein S11 [Streptomyces roseosporus NRRL 15998]
gi|292834252|gb|EFF92601.1| 30S ribosomal protein S11 [Streptomyces sp. e14]
gi|294327092|gb|EFG08735.1| 30S ribosomal protein S11 [Streptomyces clavuligerus ATCC 27064]
gi|302445172|gb|EFL16988.1| 30S ribosomal protein S11 [Streptomyces sp. C]
gi|302471186|gb|EFL34279.1| 30S ribosomal protein S11 [Streptomyces viridochromogenes DSM
40736]
gi|320009076|gb|ADW03926.1| 30S ribosomal protein S11 [Streptomyces flavogriseus ATCC 33331]
gi|326657556|gb|EGE42402.1| 30S ribosomal protein S11 [Streptomyces cf. griseus XylebKG-1]
gi|328884453|emb|CCA57692.1| SSU ribosomal protein S11p [Streptomyces venezuelae ATCC 10712]
Length = 134
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAA
Sbjct: 9 AAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP
Sbjct: 69 QMAAESAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPTPHNGCRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 PKRRRV 134
>gi|229829400|ref|ZP_04455469.1| hypothetical protein GCWU000342_01490 [Shuttleworthia satelles DSM
14600]
gi|229791831|gb|EEP27945.1| hypothetical protein GCWU000342_01490 [Shuttleworthia satelles DSM
14600]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ ++FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 16 NVEHGQAHIQASFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETATKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G T+ SI DVT + HNGCRP KRRR+
Sbjct: 76 LPHGLKTVDVFVKGPGSGREAAIRALAAAGLTVQSIKDVTPVPHNGCRPPKRRRV 130
>gi|313206371|ref|YP_004045548.1| SSU ribosomal protein s11p [Riemerella anatipestifer DSM 15868]
gi|312445687|gb|ADQ82042.1| SSU ribosomal protein S11P [Riemerella anatipestifer DSM 15868]
gi|315023688|gb|EFT36692.1| SSU ribosomal protein S11p (S14e) [Riemerella anatipestifer RA-YM]
gi|325336183|gb|ADZ12457.1| Ribosomal protein S11 [Riemerella anatipestifer RA-GD]
Length = 129
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R+ K G AH+ +TFNN I++T+ +G I+WSS +GF GS+KN+P
Sbjct: 1 MAKQTKVTKKRKVKVEAIGEAHIQATFNNIIISLTNKNGEVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A ++C+ A G+ ++V V G GAGR+SA+R + G + I DVT + HNG
Sbjct: 61 FAAQMAAENCAQVAHEAGLRRVKVFVKGPGAGRESAIRTIHNSGIEVSEIVDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|288574688|ref|ZP_06393045.1| ribosomal protein S11 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570429|gb|EFC91986.1| ribosomal protein S11 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R + +E+KNI G AHV STFNNT ++ITD G I+W+S VGF G+RK++
Sbjct: 1 MAKRTQRRGKRKEKKNISYGVAHVFSTFNNTIVSITDKGGAVISWASGGNVGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A+ + AQ+HG+ ++V V G G GR+SA+RAL+ G + SI D T I HN
Sbjct: 61 PFAAQIASQQAAKAAQDHGLKEVDVIVKGPGPGRESAIRALQGAGLQVNSIRDDTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|15594846|ref|NP_212635.1| 30S ribosomal protein S11 [Borrelia burgdorferi B31]
gi|6226054|sp|O51454|RS11_BORBU RecName: Full=30S ribosomal protein S11
gi|2688390|gb|AAC66841.1| ribosomal protein S11 (rpsK) [Borrelia burgdorferi B31]
Length = 134
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 87/128 (67%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + + + ++NI G ++ +TFNNT +T++D GN +AW+S +GF G++K++P+
Sbjct: 7 AKLSTNSKKKIKRNIGEGNVYIQATFNNTIVTVSDIKGNALAWASAGGMGFKGAKKSTPY 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+ + K ++ G++ + V + G G GR+SA+RA+ +IG T+ SI D+T I HNGC
Sbjct: 67 AAQITAESALNKVRDFGINYVHVYIKGPGIGRESAIRAIGSIGMTVKSISDITPIPHNGC 126
Query: 122 RPRKRRRI 129
RP+K RR+
Sbjct: 127 RPKKTRRV 134
>gi|30918396|sp|P10789|RS11_BACST RecName: Full=30S ribosomal protein S11; Short=BS11
Length = 129
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R RKNI +G AH+ STFNNT +TITD HGN +AW+S +GF GSRK++P
Sbjct: 1 MARRTNTRKRRVRKNIDTGIAHIRSTFNNTIVTITDVHGNALAWASAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT I H+G
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPIPHDG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|194477036|ref|YP_002049215.1| 30S ribosomal protein S11 [Paulinella chromatophora]
gi|171192043|gb|ACB43005.1| 30S ribosomal protein S11 [Paulinella chromatophora]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G IAWSS GF G+RK +
Sbjct: 1 MAKPAKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTTGEVIAWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|52840597|ref|YP_094396.1| 30S ribosomal protein S11 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54293344|ref|YP_125759.1| 30S ribosomal protein S11 [Legionella pneumophila str. Lens]
gi|54296388|ref|YP_122757.1| 30S ribosomal protein S11 [Legionella pneumophila str. Paris]
gi|59798609|sp|Q5WZI9|RS11_LEGPL RecName: Full=30S ribosomal protein S11
gi|59798610|sp|Q5X836|RS11_LEGPA RecName: Full=30S ribosomal protein S11
gi|59798620|sp|Q5ZYM0|RS11_LEGPH RecName: Full=30S ribosomal protein S11
gi|52627708|gb|AAU26449.1| 30S ribosomal protein S11 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750173|emb|CAH11565.1| 30S ribosomal protein S11 [Legionella pneumophila str. Paris]
gi|53753176|emb|CAH14623.1| 30S ribosomal protein S11 [Legionella pneumophila str. Lens]
gi|307609160|emb|CBW98616.1| 30S ribosomal protein S11 [Legionella pneumophila 130b]
Length = 132
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/127 (44%), Positives = 81/127 (63%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ R + ++ + G H+ ++FNNT +T TD GN + W++ GF GSRK++P+A
Sbjct: 6 SKQQKTRKKVKRVVSDGIVHIHASFNNTIVTFTDRQGNALCWATSGGSGFRGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQVAT+ +A A+ +GM S+ V V G G GR+S +R L F IV I DVT I HNGC+
Sbjct: 66 AQVATERAAAVAKEYGMKSVAVFVHGPGPGRESTIRELITQDFKIVEITDVTGIPHNGCK 125
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 126 PPKKRRV 132
>gi|319952172|ref|YP_004163439.1| ssu ribosomal protein s11p [Cellulophaga algicola DSM 14237]
gi|319420832|gb|ADV47941.1| SSU ribosomal protein S11P [Cellulophaga algicola DSM 14237]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS +++ + + + S G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+
Sbjct: 1 MAKSNTKVAKKRKVIVESVGEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A++DC+ A G+ ++V V G G GR+SA+R+L G + I DVT I HN
Sbjct: 61 PYAAQIASEDCAKVAHEAGLRKVKVYVKGPGNGRESAIRSLHNAGIEVTEIIDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|299143168|ref|ZP_07036248.1| 30S ribosomal protein S11 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517653|gb|EFI41392.1| 30S ribosomal protein S11 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 131
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 70/131 (53%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKSP--SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R+R RERKNI G+AH+ STFNNT +T+TD GN I+W+S +GF GSRK+
Sbjct: 1 MAKKQKVTRVRRRERKNIEKGQAHIASTFNNTMVTLTDMSGNVISWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + ++KA+ HG+ S+EV V G G+GR++A+R+L+A G + I D T I H
Sbjct: 61 TPFAAQEAAESAASKAKEHGLKSVEVFVKGPGSGREAAIRSLQASGLEVTMIKDETPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|329577724|gb|EGG59150.1| 30S ribosomal protein S11 [Enterococcus faecalis TX1467]
Length = 129
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI SG AH+ STFNNT + I D HGN +AWSS +GF GS+K++P
Sbjct: 1 MAAKKVSRKRRVKKNIESGVAHIHSTFNNTIVMIADTHGNALAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +++V V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAATKVAMEHGLKTVDVTVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|206890066|ref|YP_002249222.1| ribosomal protein S11 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742004|gb|ACI21061.1| ribosomal protein S11 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 128
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AHV ++FNNT ITITDP+GN +AW+S GF GSRK +P+AAQ+A + + +
Sbjct: 14 NIPYGVAHVQTSFNNTIITITDPNGNVVAWASSGSCGFKGSRKGTPYAAQIAAEAVAKRV 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM ++V V G GAGR++A+RAL+A G I I DVT + HNGCRP KRRR+
Sbjct: 74 IDMGMKQIDVLVKGPGAGRETAIRALQAAGLEINLIKDVTPVPHNGCRPPKRRRV 128
>gi|254437876|ref|ZP_05051370.1| ribosomal protein S11 [Octadecabacter antarcticus 307]
gi|254449426|ref|ZP_05062863.1| ribosomal protein S11 [Octadecabacter antarcticus 238]
gi|198253322|gb|EDY77636.1| ribosomal protein S11 [Octadecabacter antarcticus 307]
gi|198263832|gb|EDY88102.1| ribosomal protein S11 [Octadecabacter antarcticus 238]
Length = 129
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 95/129 (73%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + P R + + KNI +G AHV S+FNNT I I+D GN IAWSS +GF GSRK++P
Sbjct: 1 MARDPKRTKKKVSKNIAAGVAHVNSSFNNTTILISDVQGNAIAWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KAQ HG+ +LEV+V G G+GR+SALRAL A G + SI DVT +AHNG
Sbjct: 61 YAAQMAAEDVAKKAQEHGVKTLEVEVQGPGSGRESALRALAAAGLNVTSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|194334836|ref|YP_002016696.1| 30S ribosomal protein S11 [Prosthecochloris aestuarii DSM 271]
gi|226708400|sp|B4S5A3|RS11_PROA2 RecName: Full=30S ribosomal protein S11
gi|194312654|gb|ACF47049.1| ribosomal protein S11 [Prosthecochloris aestuarii DSM 271]
Length = 127
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 82/121 (67%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+QV ++
Sbjct: 7 KKKKVKVTPEGAVHIKASFNNVLVTITDMQGNTVSWSSAGKNGFKGSKKNTPYASQVTSE 66
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A + GM + V + G G+GRD+A+RAL+ G + +I D+T + HNGCRP KRRR
Sbjct: 67 AAAKEAFDLGMRYVHVFIKGPGSGRDAAIRALQGAGLDVKTIKDITPLPHNGCRPPKRRR 126
Query: 129 I 129
+
Sbjct: 127 V 127
>gi|169335655|ref|ZP_02862848.1| hypothetical protein ANASTE_02075 [Anaerofustis stercorihominis DSM
17244]
gi|169258393|gb|EDS72359.1| hypothetical protein ANASTE_02075 [Anaerofustis stercorihominis DSM
17244]
Length = 131
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G+AH+ STFNNT +T+TD GN +AWSS +GF GSRK++P+AAQ A + + +A
Sbjct: 17 NIEKGQAHIRSTFNNTIVTLTDVAGNALAWSSAGELGFKGSRKSTPYAAQSAATEAAKRA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G ++SI DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKTIDVFVKGPGSGREAAIRALQAAGLNVISIKDVTPIPHNGCRPPKRRRV 131
>gi|16077210|ref|NP_388023.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. subtilis str.
168]
gi|221307955|ref|ZP_03589802.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312276|ref|ZP_03594081.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317210|ref|ZP_03598504.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321473|ref|ZP_03602767.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313814|ref|YP_004206101.1| 30S ribosomal protein S11 [Bacillus subtilis BSn5]
gi|133719|sp|P04969|RS11_BACSU RecName: Full=30S ribosomal protein S11; Short=BS11
gi|142462|gb|AAA22216.1| ribosomal protein S11 [Bacillus subtilis]
gi|143451|gb|AAA22707.1| ribosomal protein S11 [Bacillus subtilis]
gi|1044990|gb|AAB06825.1| ribosomal protein S11 [Bacillus subtilis]
gi|2632409|emb|CAB11918.1| ribosomal protein S11 (BS11) [Bacillus subtilis subsp. subtilis
str. 168]
gi|291482514|dbj|BAI83589.1| 30S ribosomal protein S11 [Bacillus subtilis subsp. natto BEST195]
gi|320020088|gb|ADV95074.1| 30S ribosomal protein S11 [Bacillus subtilis BSn5]
Length = 131
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI SG AH+ STFNNT +TITD HGN I+WSS +GF GSRK++PF
Sbjct: 4 ARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|319944772|ref|ZP_08019036.1| 30S ribosomal protein S11 [Lautropia mirabilis ATCC 51599]
gi|319742021|gb|EFV94444.1| 30S ribosomal protein S11 [Lautropia mirabilis ATCC 51599]
Length = 137
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 90/126 (71%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R R + +KN+ G AHV ++FNNT ITITD GNT++W++ GF GSRK++PFAA
Sbjct: 12 ASQRARKKVKKNVSDGIAHVHASFNNTIITITDRQGNTLSWATSGGAGFRGSRKSTPFAA 71
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QVA + A +G+ +L+V++ G G GRDS++RAL A+G I+SI DVT + HNGCRP
Sbjct: 72 QVAAEAAGRVAIEYGIKNLDVRIKGPGPGRDSSVRALNALGIKILSISDVTPVPHNGCRP 131
Query: 124 RKRRRI 129
K+RRI
Sbjct: 132 PKKRRI 137
>gi|313891526|ref|ZP_07825136.1| 30S ribosomal protein S11 [Dialister microaerophilus UPII 345-E]
gi|313119985|gb|EFR43167.1| 30S ribosomal protein S11 [Dialister microaerophilus UPII 345-E]
Length = 127
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 70/126 (55%), Positives = 94/126 (74%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + + RERK++ +G AH+ STFNNT +TITD +GNTI+W+S +GF GSRK++PFAA
Sbjct: 2 ATVKSKRRERKHVETGAAHIRSTFNNTIVTITDSNGNTISWASAGELGFRGSRKSTPFAA 61
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + A +HGM S +V V G GAGR++A+RAL+A G I SI DVT I HNGCRP
Sbjct: 62 QMAAEKAAKVAIDHGMRSADVFVKGPGAGREAAIRALQAAGIEISSIKDVTPIPHNGCRP 121
Query: 124 RKRRRI 129
KRRR+
Sbjct: 122 PKRRRV 127
>gi|313836058|gb|EFS73772.1| 30S ribosomal protein S11 [Propionibacterium acnes HL037PA2]
gi|314929594|gb|EFS93425.1| 30S ribosomal protein S11 [Propionibacterium acnes HL044PA1]
gi|314970519|gb|EFT14617.1| 30S ribosomal protein S11 [Propionibacterium acnes HL037PA3]
gi|328906197|gb|EGG25972.1| 30S ribosomal protein S11 [Propionibacterium sp. P08]
Length = 135
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 91/126 (72%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+++R +E+KN+ +G+AH+ STFNNT I ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 PKAKVRRKEKKNVAAGQAHIKSTFNNTIIAITDPSGAVISWASAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + +A HGM ++V V G G+GR++A+R+L A+G I I DVT + HNGCRP
Sbjct: 70 QMAAEAAGRRAMEHGMKRVDVFVKGPGSGRETAIRSLGAVGLEIGPISDVTPVPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|302876507|ref|YP_003845140.1| 30S ribosomal protein S11 [Clostridium cellulovorans 743B]
gi|307687179|ref|ZP_07629625.1| 30S ribosomal protein S11 [Clostridium cellulovorans 743B]
gi|302579364|gb|ADL53376.1| 30S ribosomal protein S11 [Clostridium cellulovorans 743B]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD HGN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NVEHGAAHIKSTFNNSIVTLTDAHGNALSWSSSGALGFRGSRKSTPFAAQMAAETAAKVA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSVEVYVKGPGAGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 131
>gi|295694864|ref|YP_003588102.1| 30S ribosomal protein S11 [Bacillus tusciae DSM 2912]
gi|295410466|gb|ADG04958.1| 30S ribosomal protein S11 [Bacillus tusciae DSM 2912]
Length = 135
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/128 (55%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ +R++ R+RKNI +G AH+ STFNNT +TITD GN I+W+S VGF GSRK++PF
Sbjct: 8 AATATRMKRRDRKNIEAGIAHIRSTFNNTIVTITDGAGNAISWASAGNVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A D + KA HGM ++EV V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 68 AAQMAADSAARKAMEHGMRTVEVYVKGPGAGREAAIRSLQAAGLEVSLIKDVTPIPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|15605670|ref|NP_213045.1| 30S ribosomal protein S11 [Aquifex aeolicus VF5]
gi|6226052|sp|O66485|RS11_AQUAE RecName: Full=30S ribosomal protein S11
gi|2982821|gb|AAC06444.1| ribosomal protein S11 [Aquifex aeolicus VF5]
Length = 125
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/116 (48%), Positives = 79/116 (68%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + H+ +TFNNT + +TD GNTIAW+S VGF G+RK++P+AAQ+A +
Sbjct: 10 RQVTKAIVHIHTTFNNTIVNVTDTQGNTIAWASGGTVGFKGTRKSTPYAAQLAAQKAMKE 69
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+ HG+ +E+ V G GAGR+SA+RA+ A G + +I DVT I HNGCRP RRR+
Sbjct: 70 AKEHGVQEVEIWVKGPGAGRESAVRAVFASGVKVTAIRDVTPIPHNGCRPPARRRV 125
>gi|293375415|ref|ZP_06621696.1| 30S ribosomal protein S11 [Turicibacter sanguinis PC909]
gi|325844448|ref|ZP_08168175.1| 30S ribosomal protein S11 [Turicibacter sp. HGF1]
gi|292645968|gb|EFF63997.1| 30S ribosomal protein S11 [Turicibacter sanguinis PC909]
gi|325489122|gb|EGC91506.1| 30S ribosomal protein S11 [Turicibacter sp. HGF1]
Length = 129
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 91/128 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +TITDPHGN I+WSS +GF GSRK++P
Sbjct: 1 MARKQVTRKRRVKKNIATGVAHIHSTFNNTIVTITDPHGNAISWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + A +HGM S++V V G G GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKAAMDHGMKSVDVTVKGPGPGREAAIRALQAAGLDVTAIKDVTPVPHNG 120
Query: 121 CRPRKRRR 128
CRP K R
Sbjct: 121 CRPPKHPR 128
>gi|256371241|ref|YP_003109065.1| ribosomal protein S11 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007825|gb|ACU53392.1| ribosomal protein S11 [Acidimicrobium ferrooxidans DSM 10331]
Length = 132
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/116 (55%), Positives = 85/116 (73%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
K+I G AH+ S+FNNT +TITDP GN IAW+S VGF GSRK++PFAAQVA + C+ +
Sbjct: 17 KSIARGVAHIHSSFNNTIVTITDPAGNVIAWASSGNVGFKGSRKSTPFAAQVAGETCAKR 76
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A HG+ ++V + G G+GR++A +AL G I SI DVT + HNGCRP+KRRR+
Sbjct: 77 AMEHGVREVDVYLKGPGSGRETAHKALAGAGIEIRSIRDVTPVPHNGCRPKKRRRV 132
>gi|251799615|ref|YP_003014346.1| ribosomal protein S11 [Paenibacillus sp. JDR-2]
gi|247547241|gb|ACT04260.1| ribosomal protein S11 [Paenibacillus sp. JDR-2]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 72/128 (56%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGNLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT + HNGC
Sbjct: 64 AAQMAAEAAAKAAMEHGMKAVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|110639511|ref|YP_679720.1| 30S ribosomal protein S11 [Cytophaga hutchinsonii ATCC 33406]
gi|123058543|sp|Q11QD6|RS11_CYTH3 RecName: Full=30S ribosomal protein S11
gi|110282192|gb|ABG60378.1| SSU ribosomal protein S11P [Cytophaga hutchinsonii ATCC 33406]
Length = 135
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G+ H+ ++FNN I++T+ G I+W+S +GF GS+KN+P+AAQVA +C+ A
Sbjct: 23 PTGQVHIRASFNNIIISVTNSTGQVISWASAGKMGFRGSKKNTPYAAQVAAQNCAQVAFE 82
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV V G G+GR+SA+R ++ G +++I DVT + HNGCRP K+RR+
Sbjct: 83 GGMRKCEVFVKGPGSGRESAIRTIQNAGIEVLTIKDVTPMPHNGCRPPKKRRV 135
>gi|152973982|ref|YP_001373499.1| 30S ribosomal protein S11 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189040401|sp|A7GK46|RS11_BACCN RecName: Full=30S ribosomal protein S11
gi|152022734|gb|ABS20504.1| ribosomal protein S11 [Bacillus cytotoxicus NVH 391-98]
Length = 129
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 93/129 (72%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN I+WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIETGVAHIRSTFNNTIVTLTDTHGNAISWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ SLEV V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLKSLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|197117348|ref|YP_002137775.1| 30S ribosomal protein S11 [Geobacter bemidjiensis Bem]
gi|253701897|ref|YP_003023086.1| 30S ribosomal protein S11 [Geobacter sp. M21]
gi|322418389|ref|YP_004197612.1| 30S ribosomal protein S11 [Geobacter sp. M18]
gi|197086708|gb|ACH37979.1| ribosomal protein S11 [Geobacter bemidjiensis Bem]
gi|251776747|gb|ACT19328.1| ribosomal protein S11 [Geobacter sp. M21]
gi|320124776|gb|ADW12336.1| 30S ribosomal protein S11 [Geobacter sp. M18]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/115 (61%), Positives = 87/115 (75%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ +TFNNT ITITDP GN +AW + GF GSRK++PFAAQ+A +D + KA
Sbjct: 17 NIPNGVAHIQATFNNTMITITDPVGNVVAWCTSGAKGFKGSRKSTPFAAQMAAEDAAKKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM S+EV V G G+GR+SALRAL+A GF + I DVT I HNGCRP KRRR+
Sbjct: 77 QEHGMRSIEVYVKGPGSGRESALRALQAAGFAVSFIRDVTPIPHNGCRPPKRRRV 131
>gi|226305368|ref|YP_002765326.1| 30S ribosomal protein S11 [Rhodococcus erythropolis PR4]
gi|229489326|ref|ZP_04383189.1| 30S ribosomal protein S11 [Rhodococcus erythropolis SK121]
gi|259494632|sp|C0ZW52|RS11_RHOE4 RecName: Full=30S ribosomal protein S11
gi|226184483|dbj|BAH32587.1| 30S ribosomal protein S11 [Rhodococcus erythropolis PR4]
gi|229323423|gb|EEN89181.1| 30S ribosomal protein S11 [Rhodococcus erythropolis SK121]
Length = 137
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R R++KNI G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 10 PKKTQKTRRRDKKNIPHGAAHIKSTFNNTIVSITDPAGNVISWASSGHVGFKGSRKSTPF 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 70 AAQLAAESAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 129
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 130 RPPKRRRV 137
>gi|226323039|ref|ZP_03798557.1| hypothetical protein COPCOM_00811 [Coprococcus comes ATCC 27758]
gi|225208606|gb|EEG90960.1| hypothetical protein COPCOM_00811 [Coprococcus comes ATCC 27758]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LPHGLKSVDVFVKGPGSGREAAIRALQACGIDVTSIRDVTPVPHNGCRPPKRRRV 131
>gi|312130524|ref|YP_003997864.1| ssu ribosomal protein s11p [Leadbetterella byssophila DSM 17132]
gi|311907070|gb|ADQ17511.1| SSU ribosomal protein S11P [Leadbetterella byssophila DSM 17132]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 79/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+ H+ ++FNN I++T+ G I+W+S +GF GS+KN+P+AAQ+A +C A +
Sbjct: 19 PYGQVHIKASFNNIIISVTNSTGQVISWASAGKMGFRGSKKNTPYAAQMAAQNCCQVAYD 78
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V G G+GR+SA+R ++++G +V+I DVT + HNGCRP KRRR+
Sbjct: 79 LGMRKADIFVKGPGSGRESAMRTVQSVGIDVVNIFDVTPMPHNGCRPPKRRRV 131
>gi|157690926|ref|YP_001485388.1| 30S ribosomal protein S11 [Bacillus pumilus SAFR-032]
gi|194017599|ref|ZP_03056210.1| ribosomal protein S11 [Bacillus pumilus ATCC 7061]
gi|166991576|sp|A8F9B1|RS11_BACP2 RecName: Full=30S ribosomal protein S11
gi|157679684|gb|ABV60828.1| ribosomal protein S11 [Bacillus pumilus SAFR-032]
gi|194010871|gb|EDW20442.1| ribosomal protein S11 [Bacillus pumilus ATCC 7061]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI +G AH+ STFNNT +TITD HGN I+WSS +GF GSRK++PF
Sbjct: 4 ARKQNTRKRRVKKNIEAGIAHIRSTFNNTIVTITDVHGNAISWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|282882492|ref|ZP_06291113.1| 30S ribosomal protein S11 [Peptoniphilus lacrimalis 315-B]
gi|300814609|ref|ZP_07094860.1| 30S ribosomal protein S11 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297634|gb|EFA90109.1| 30S ribosomal protein S11 [Peptoniphilus lacrimalis 315-B]
gi|300511228|gb|EFK38477.1| 30S ribosomal protein S11 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKS--PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R++ R RKNI G+AH+ STFNNT +T+TD +GN I+W+S +GF GSRK+
Sbjct: 1 MAKKQRATRVKRRARKNIEKGQAHIASTFNNTMVTLTDTNGNVISWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + KA+ HG+ S++V V G G+GR++A+R+L+A G + I DVT I H
Sbjct: 61 TPFAAQEAAAEAANKAKEHGLKSVDVYVKGPGSGREAAIRSLQASGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|253577206|ref|ZP_04854526.1| 30S ribosomal protein S11 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843450|gb|EES71478.1| 30S ribosomal protein S11 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/128 (57%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGGLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 64 AAQMAAESAAKAAMEHGMKTVEVMVKGPGAGREAAIRSLQAAGLEVNMIKDVTPIPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|225026389|ref|ZP_03715581.1| hypothetical protein EUBHAL_00638 [Eubacterium hallii DSM 3353]
gi|224956278|gb|EEG37487.1| hypothetical protein EUBHAL_00638 [Eubacterium hallii DSM 3353]
Length = 131
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 17 NVQHGQAHIQSSFNNTIVTLTDSEGNALSWASAGEMGFRGSKKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 VVHGLKTVEVMVKGPGSGREAAIRALQACGLEVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|88807907|ref|ZP_01123418.1| 30S ribosomal protein S11 [Synechococcus sp. WH 7805]
gi|148238748|ref|YP_001224135.1| 30S ribosomal protein S11 [Synechococcus sp. WH 7803]
gi|166231838|sp|A5GIS3|RS11_SYNPW RecName: Full=30S ribosomal protein S11
gi|88787946|gb|EAR19102.1| 30S ribosomal protein S11 [Synechococcus sp. WH 7805]
gi|147847287|emb|CAK22838.1| 30S ribosomal protein S11 [Synechococcus sp. WH 7803]
Length = 130
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKTVKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTTGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|317131396|ref|YP_004090710.1| 30S ribosomal protein S11 [Ethanoligenens harbinense YUAN-3]
gi|315469375|gb|ADU25979.1| 30S ribosomal protein S11 [Ethanoligenens harbinense YUAN-3]
Length = 137
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 70/126 (55%), Positives = 91/126 (72%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + + RERKNI G AH+ STFNNT +TITD GN+I+W+S +GF GSRK+SPFAA
Sbjct: 12 ATATRKRRERKNIDRGAAHIQSTFNNTIVTITDTQGNSISWASAGGLGFRGSRKSSPFAA 71
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + A HGM ++EV V G GAGR++A+RAL+A G + I DVT I HNGCRP
Sbjct: 72 QMAAETAAKVAMEHGMKTIEVFVKGPGAGREAAIRALQAAGLEVNMIKDVTPIPHNGCRP 131
Query: 124 RKRRRI 129
KRRR+
Sbjct: 132 PKRRRV 137
>gi|311070790|ref|YP_003975713.1| 30S ribosomal protein S11 [Bacillus atrophaeus 1942]
gi|310871307|gb|ADP34782.1| 30S ribosomal protein S11 [Bacillus atrophaeus 1942]
Length = 131
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R +KNI SG AH+ STFNNT +TITD HGN I+WSS +GF GSRK++PF
Sbjct: 4 ARKTNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HG+ +LEV V G G+GR++A+RAL+A G + +I DVT + HNGC
Sbjct: 64 AAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|81429353|ref|YP_396354.1| 30S ribosomal protein S11 [Lactobacillus sakei subsp. sakei 23K]
gi|91207657|sp|Q38UT6|RS11_LACSS RecName: Full=30S ribosomal protein S11
gi|78610996|emb|CAI56048.1| 30S ribosomal protein S11 [Lactobacillus sakei subsp. sakei 23K]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R +KNI +G AH+ STFNNT + ITDP+GN +AWSS +GF GSRK++
Sbjct: 1 MANKKNAPRKRRVKKNIEAGVAHIHSTFNNTLVMITDPNGNAVAWSSAGSLGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + +A HGM S+EV V G G+GR++A+R+L+A G + +I DVT + HN
Sbjct: 61 PFAAQMAAEAAGKEAMEHGMKSIEVAVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHN 120
Query: 120 GCRPRKRRRI 129
G RP KRRR+
Sbjct: 121 GSRPPKRRRV 130
>gi|21223107|ref|NP_628886.1| 30S ribosomal protein S11 [Streptomyces coelicolor A3(2)]
gi|239980030|ref|ZP_04702554.1| 30S ribosomal protein S11 [Streptomyces albus J1074]
gi|256785797|ref|ZP_05524228.1| 30S ribosomal protein S11 [Streptomyces lividans TK24]
gi|289769689|ref|ZP_06529067.1| 30S ribosomal protein S11 [Streptomyces lividans TK24]
gi|291451887|ref|ZP_06591277.1| 30S ribosomal protein S11 [Streptomyces albus J1074]
gi|302558968|ref|ZP_07311310.1| 30S ribosomal protein S11 [Streptomyces griseoflavus Tu4000]
gi|329938206|ref|ZP_08287657.1| 30S ribosomal protein S11 [Streptomyces griseoaurantiacus M045]
gi|6094148|sp|P72403|RS11_STRCO RecName: Full=30S ribosomal protein S11
gi|3449240|emb|CAA20384.1| 30S ribosomal protein S11 [Streptomyces coelicolor A3(2)]
gi|289699888|gb|EFD67317.1| 30S ribosomal protein S11 [Streptomyces lividans TK24]
gi|291354836|gb|EFE81738.1| 30S ribosomal protein S11 [Streptomyces albus J1074]
gi|302476586|gb|EFL39679.1| 30S ribosomal protein S11 [Streptomyces griseoflavus Tu4000]
gi|329302695|gb|EGG46585.1| 30S ribosomal protein S11 [Streptomyces griseoaurantiacus M045]
Length = 134
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAA
Sbjct: 9 AAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGNVISWASAGHVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP
Sbjct: 69 QMAAESAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPTPHNGCRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 PKRRRV 134
>gi|22711965|ref|NP_683833.1| ribosomal protein S11 [Chaetosphaeridium globosum]
gi|48474484|sp|Q8M9V6|RR11_CHAGL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|22416969|gb|AAM96569.1| ribosomal protein S11 [Chaetosphaeridium globosum]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPK +I + +K + G H+ ++FNNT +TITD G I+WSS GF G++K++
Sbjct: 1 MPKPSKKINLRKIKKKVPKGVIHIQASFNNTIVTITDVRGQVISWSSAGACGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + GM EV +SG G GRD+ALR +R G T+ + DVT I HN
Sbjct: 61 PFAAQTAAEKALRPLIDQGMRQAEVMISGPGRGRDTALRIIRKSGITLNFVRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP +RR+
Sbjct: 121 GCRPPSKRRV 130
>gi|153854996|ref|ZP_01996209.1| hypothetical protein DORLON_02215 [Dorea longicatena DSM 13814]
gi|166031632|ref|ZP_02234461.1| hypothetical protein DORFOR_01332 [Dorea formicigenerans ATCC
27755]
gi|149752493|gb|EDM62424.1| hypothetical protein DORLON_02215 [Dorea longicatena DSM 13814]
gi|166028609|gb|EDR47366.1| hypothetical protein DORFOR_01332 [Dorea formicigenerans ATCC
27755]
Length = 131
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVEHGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKSVDVMVKGPGSGREAAIRALQACGIDVTSIRDVTPVPHNGCRPPKRRRV 131
>gi|78211906|ref|YP_380685.1| 30S ribosomal protein S11 [Synechococcus sp. CC9605]
gi|260434864|ref|ZP_05788834.1| 30S ribosomal protein S11 [Synechococcus sp. WH 8109]
gi|123743386|sp|Q3AMQ2|RS11_SYNSC RecName: Full=30S ribosomal protein S11
gi|78196365|gb|ABB34130.1| 30S ribosomal protein S11 [Synechococcus sp. CC9605]
gi|260412738|gb|EEX06034.1| 30S ribosomal protein S11 [Synechococcus sp. WH 8109]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKTVKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTAGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|290968217|ref|ZP_06559760.1| 30S ribosomal protein S11 [Megasphaera genomosp. type_1 str. 28L]
gi|312899070|ref|ZP_07758454.1| 30S ribosomal protein S11 [Megasphaera micronuciformis F0359]
gi|290781699|gb|EFD94284.1| 30S ribosomal protein S11 [Megasphaera genomosp. type_1 str. 28L]
gi|310619855|gb|EFQ03431.1| 30S ribosomal protein S11 [Megasphaera micronuciformis F0359]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ R + +E+K++ SG AH+ STFNNT +TI+D GN ++W+S +GF GSRK++
Sbjct: 1 MAKNNVRSNKRKEKKHVESGAAHIRSTFNNTIVTISDTKGNALSWASAGGLGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ +EV V G G+GR++A+RAL+A G + SI DVT I HN
Sbjct: 61 PFAAQMAAEQAAKAAMEHGLRQVEVFVKGPGSGREAAIRALQAAGLEVNSIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|119953290|ref|YP_945499.1| 30S ribosomal protein S11 [Borrelia turicatae 91E135]
gi|119862061|gb|AAX17829.1| SSU ribosomal protein S11P [Borrelia turicatae 91E135]
Length = 129
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 85/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S + + +KNI G ++ +TFNNT +T++D GNT+AW+S +GF G++K++P
Sbjct: 1 MSAKVSTNKKKVKKNIGEGNVYIQATFNNTIVTVSDIRGNTLAWASAGGMGFKGAKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ + K ++ G++ + V V G G GR+SA+R + + G + SI DVT I HNG
Sbjct: 61 YAAQMTAESALGKVKDFGINYVHVFVKGPGIGRESAIRTVGSTGIIVKSISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP+K RR+
Sbjct: 121 CRPKKTRRV 129
>gi|77918340|ref|YP_356155.1| 30S ribosomal protein S11 [Pelobacter carbinolicus DSM 2380]
gi|91207664|sp|Q3A6M2|RS11_PELCD RecName: Full=30S ribosomal protein S11
gi|77544423|gb|ABA87985.1| SSU ribosomal protein S11P [Pelobacter carbinolicus DSM 2380]
Length = 131
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNR--ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K R+ + E+KNI +G AH+ +TFNNT +TITD GN I+WS+ + F GSRK+
Sbjct: 1 MAKGSKRVVRKRAEKKNIANGIAHIQATFNNTIVTITDIAGNVISWSTCGTMNFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A +D + KA HG+ S+EV+V G G+GR+SALRAL + G I I DVT I H
Sbjct: 61 TPFAAQIAAEDAAKKAMEHGLRSVEVRVKGPGSGRESALRALSSAGLNISVIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|108798083|ref|YP_638280.1| 30S ribosomal protein S11 [Mycobacterium sp. MCS]
gi|119867179|ref|YP_937131.1| 30S ribosomal protein S11 [Mycobacterium sp. KMS]
gi|126433743|ref|YP_001069434.1| 30S ribosomal protein S11 [Mycobacterium sp. JLS]
gi|123179359|sp|Q1BD10|RS11_MYCSS RecName: Full=30S ribosomal protein S11
gi|152060796|sp|A3PVL6|RS11_MYCSJ RecName: Full=30S ribosomal protein S11
gi|152060797|sp|A1UBY3|RS11_MYCSK RecName: Full=30S ribosomal protein S11
gi|108768502|gb|ABG07224.1| SSU ribosomal protein S11P [Mycobacterium sp. MCS]
gi|119693268|gb|ABL90341.1| SSU ribosomal protein S11P [Mycobacterium sp. KMS]
gi|126233543|gb|ABN96943.1| SSU ribosomal protein S11P [Mycobacterium sp. JLS]
Length = 138
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 92/124 (74%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ R RE+KN+ G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PFAAQ+
Sbjct: 15 QKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPFAAQL 74
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP K
Sbjct: 75 AAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAIADVTPQPHNGCRPPK 134
Query: 126 RRRI 129
RRR+
Sbjct: 135 RRRV 138
>gi|291521874|emb|CBK80167.1| SSU ribosomal protein S11P [Coprococcus catus GD/7]
Length = 131
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDTEGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LIHGLKSVEVMVKGPGSGREAAIRALQACGIEVTSIRDVTPVPHNGCRPPKRRRV 131
>gi|229496347|ref|ZP_04390067.1| 30S ribosomal protein S11 [Porphyromonas endodontalis ATCC 35406]
gi|229316925|gb|EEN82838.1| 30S ribosomal protein S11 [Porphyromonas endodontalis ATCC 35406]
Length = 128
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R K +G+AH+ S+FNN ++IT+ G I+WSS +GF S+KN+P
Sbjct: 1 MAKKVT-AKKRVVKVEATGQAHIHSSFNNIIVSITNNEGQVISWSSAGKMGFRSSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A DC+ A + G+ ++V V G G GR+SA+R + G + I DVT + HNG
Sbjct: 60 YAAQMAAQDCAKVAYDLGLRRVKVYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP K+R++
Sbjct: 120 CRPPKKRKV 128
>gi|50364964|ref|YP_053389.1| 30S ribosomal protein S11 [Mesoplasma florum L1]
gi|59798693|sp|Q6F1W8|RS11_MESFL RecName: Full=30S ribosomal protein S11
gi|50363520|gb|AAT75505.1| 30S ribosomal protein S11 [Mesoplasma florum L1]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R +KNI G AH+ STFNNT +TI+D GN ++WSS +GF GS+K++
Sbjct: 1 MAKPKTNNTKKRIKKNIPKGIAHIHSTFNNTIVTISDEKGNVLSWSSAGAIGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+ ++ + A + G+ S++V+V G G GRD+A+RAL +G + SI D T I HN
Sbjct: 61 PYAAQMISEAAAKGAMDQGVKSVQVEVKGPGPGRDAAVRALTIVGMEVTSIKDCTPIPHN 120
Query: 120 GCRPRKRRR 128
G RP+KR R
Sbjct: 121 GVRPKKRPR 129
>gi|296120768|ref|YP_003628546.1| ribosomal protein S11 [Planctomyces limnophilus DSM 3776]
gi|296013108|gb|ADG66347.1| ribosomal protein S11 [Planctomyces limnophilus DSM 3776]
Length = 126
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ R + R+N+ G AH+ +TFNNT +TITD +G+ + W++ VGF GSRK++P
Sbjct: 1 MAKTK---RRKIRRNVNRGIAHIRATFNNTTVTITDANGDVLCWATAGTVGFKGSRKSTP 57
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + C+ +A G+ +E++V G G+GR+SA+ L+ G +I SI DVT + HNG
Sbjct: 58 FAAQRAAETCAERAAKFGVREMEIRVKGPGSGRESAITGLQGAGISIRSIEDVTPLPHNG 117
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 118 CRPPKKRRV 126
>gi|83591249|ref|YP_431258.1| 30S ribosomal protein S11 [Moorella thermoacetica ATCC 39073]
gi|123739204|sp|Q2RFS4|RS11_MOOTA RecName: Full=30S ribosomal protein S11
gi|83574163|gb|ABC20715.1| SSU ribosomal protein S11P [Moorella thermoacetica ATCC 39073]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 69/128 (53%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P+ +R R R+RK+I SG AH+ STFNNT +TITD +GN I+W+S VGF GSRK++PF
Sbjct: 3 PRKTARPRRRDRKHIESGIAHIKSTFNNTLVTITDKNGNAISWASAGTVGFKGSRKSTPF 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +A HG+ +E V G GAGR++A+R+L+A G + I DVT I HNGC
Sbjct: 63 AAQMAAEAAAKQAMEHGLREVECYVKGPGAGREAAIRSLQAAGLEVSVIKDVTPIPHNGC 122
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 123 RPPKRRRV 130
>gi|296445046|ref|ZP_06887007.1| 30S ribosomal protein S11 [Methylosinus trichosporium OB3b]
gi|296257467|gb|EFH04533.1| 30S ribosomal protein S11 [Methylosinus trichosporium OB3b]
Length = 129
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 85/129 (65%), Positives = 104/129 (80%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R+R RERKNIVSG AHV STFNNT ITITD GNT++WSS +GF GSRK++P
Sbjct: 1 MAKETTRVRRRERKNIVSGVAHVNSTFNNTMITITDAQGNTVSWSSAGSMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KA HG+ +LEV+VSG G+GR+SALRAL+A GFT+ SI DVT I HNG
Sbjct: 61 YAAQMAAEDAARKAGEHGVRTLEVEVSGPGSGRESALRALQAAGFTVTSIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRR+
Sbjct: 121 CRPRKRRRV 129
>gi|114799611|ref|YP_761506.1| 30S ribosomal protein S11 [Hyphomonas neptunium ATCC 15444]
gi|123322952|sp|Q0BYD7|RS11_HYPNA RecName: Full=30S ribosomal protein S11
gi|114739785|gb|ABI77910.1| ribosomal protein S11 [Hyphomonas neptunium ATCC 15444]
Length = 129
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 76/129 (58%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +RIR RERKNI SG HV S+FNNT +TITD GNTI+WSS V+ F GSRK++P
Sbjct: 1 MAREATRIRRRERKNITSGIVHVNSSFNNTMVTITDAQGNTISWSSSGVMNFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KA+ HG+ ++EV+V G G+GR+SALRAL+A G T+ +I D T I HNG
Sbjct: 61 YAAQMAAEDAAKKAKEHGLQTVEVRVRGPGSGRESALRALQAAGLTVTAINDTTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|226365622|ref|YP_002783405.1| 30S ribosomal protein S11 [Rhodococcus opacus B4]
gi|312140891|ref|YP_004008227.1| 30S ribosomal protein s11 rpsk [Rhodococcus equi 103S]
gi|325675471|ref|ZP_08155155.1| 30S ribosomal protein S11 [Rhodococcus equi ATCC 33707]
gi|254811039|sp|C1B039|RS11_RHOOB RecName: Full=30S ribosomal protein S11
gi|226244112|dbj|BAH54460.1| 30S ribosomal protein S11 [Rhodococcus opacus B4]
gi|311890230|emb|CBH49548.1| 30S ribosomal protein S11 RpsK [Rhodococcus equi 103S]
gi|325553442|gb|EGD23120.1| 30S ribosomal protein S11 [Rhodococcus equi ATCC 33707]
Length = 137
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R R++KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 10 PKKTQKARRRDKKNVPHGAAHIKSTFNNTIVSITDPAGNVISWASSGHVGFKGSRKSTPF 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 70 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 129
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 130 RPPKRRRV 137
>gi|51598756|ref|YP_072944.1| 30S ribosomal protein S11 [Borrelia garinii PBi]
gi|111115330|ref|YP_709948.1| 30S ribosomal protein S11 [Borrelia afzelii PKo]
gi|216263586|ref|ZP_03435581.1| ribosomal protein S11 [Borrelia afzelii ACA-1]
gi|216264583|ref|ZP_03436575.1| ribosomal protein S11 [Borrelia burgdorferi 156a]
gi|218249323|ref|YP_002375011.1| ribosomal protein S11 [Borrelia burgdorferi ZS7]
gi|219684430|ref|ZP_03539374.1| ribosomal protein S11 [Borrelia garinii PBr]
gi|219685249|ref|ZP_03540069.1| ribosomal protein S11 [Borrelia garinii Far04]
gi|221218156|ref|ZP_03589622.1| ribosomal protein S11 [Borrelia burgdorferi 72a]
gi|223888704|ref|ZP_03623295.1| ribosomal protein S11 [Borrelia burgdorferi 64b]
gi|224532889|ref|ZP_03673501.1| ribosomal protein S11 [Borrelia burgdorferi WI91-23]
gi|224533533|ref|ZP_03674122.1| ribosomal protein S11 [Borrelia burgdorferi CA-11.2a]
gi|224534807|ref|ZP_03675379.1| ribosomal protein S11 [Borrelia spielmanii A14S]
gi|225548628|ref|ZP_03769675.1| ribosomal protein S11 [Borrelia burgdorferi 94a]
gi|225549502|ref|ZP_03770468.1| ribosomal protein S11 [Borrelia burgdorferi 118a]
gi|225552403|ref|ZP_03773343.1| ribosomal protein S11 [Borrelia sp. SV1]
gi|226320982|ref|ZP_03796527.1| ribosomal protein S11 [Borrelia burgdorferi 29805]
gi|226321811|ref|ZP_03797337.1| ribosomal protein S11 [Borrelia burgdorferi Bol26]
gi|59798658|sp|Q661B9|RS11_BORGA RecName: Full=30S ribosomal protein S11
gi|123145702|sp|Q0SN06|RS11_BORAP RecName: Full=30S ribosomal protein S11
gi|226708334|sp|B7J266|RS11_BORBZ RecName: Full=30S ribosomal protein S11
gi|51573327|gb|AAU07352.1| ribosomal protein S11 [Borrelia garinii PBi]
gi|110890604|gb|ABH01772.1| ribosomal protein S11 [Borrelia afzelii PKo]
gi|215980430|gb|EEC21251.1| ribosomal protein S11 [Borrelia afzelii ACA-1]
gi|215981056|gb|EEC21863.1| ribosomal protein S11 [Borrelia burgdorferi 156a]
gi|218164511|gb|ACK74572.1| ribosomal protein S11 [Borrelia burgdorferi ZS7]
gi|219672419|gb|EED29472.1| ribosomal protein S11 [Borrelia garinii PBr]
gi|219673345|gb|EED30364.1| ribosomal protein S11 [Borrelia garinii Far04]
gi|221192104|gb|EEE18325.1| ribosomal protein S11 [Borrelia burgdorferi 72a]
gi|223885520|gb|EEF56619.1| ribosomal protein S11 [Borrelia burgdorferi 64b]
gi|224512165|gb|EEF82554.1| ribosomal protein S11 [Borrelia burgdorferi WI91-23]
gi|224513206|gb|EEF83568.1| ribosomal protein S11 [Borrelia burgdorferi CA-11.2a]
gi|224514055|gb|EEF84377.1| ribosomal protein S11 [Borrelia spielmanii A14S]
gi|225369779|gb|EEG99226.1| ribosomal protein S11 [Borrelia burgdorferi 118a]
gi|225370658|gb|EEH00094.1| ribosomal protein S11 [Borrelia burgdorferi 94a]
gi|225371401|gb|EEH00831.1| ribosomal protein S11 [Borrelia sp. SV1]
gi|226233000|gb|EEH31753.1| ribosomal protein S11 [Borrelia burgdorferi Bol26]
gi|226233583|gb|EEH32319.1| ribosomal protein S11 [Borrelia burgdorferi 29805]
gi|312148146|gb|ADQ30805.1| ribosomal protein S11 [Borrelia burgdorferi JD1]
gi|312149160|gb|ADQ29231.1| ribosomal protein S11 [Borrelia burgdorferi N40]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 87/128 (67%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + + + ++NI G ++ +TFNNT +T++D GN +AW+S +GF G++K++P+
Sbjct: 3 AKLSTNSKKKIKRNIGEGNVYIQATFNNTIVTVSDIKGNALAWASAGGMGFKGAKKSTPY 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+ + K ++ G++ + V + G G GR+SA+RA+ +IG T+ SI D+T I HNGC
Sbjct: 63 AAQITAESALNKVRDFGINYVHVYIKGPGIGRESAIRAIGSIGMTVKSISDITPIPHNGC 122
Query: 122 RPRKRRRI 129
RP+K RR+
Sbjct: 123 RPKKTRRV 130
>gi|305665113|ref|YP_003861400.1| 30S ribosomal protein S11 [Maribacter sp. HTCC2170]
gi|88709865|gb|EAR02097.1| 30S ribosomal protein S11 [Maribacter sp. HTCC2170]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNI-VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ ++ + + + G AHV ++FNN I++T+ G+ I+WSS GF GS+KN+
Sbjct: 1 MAKTNAKSAKKRKVIVDAVGEAHVTASFNNIIISLTNKKGDVISWSSAGKQGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +DC+ A G+ ++V V G G GR+SA+R+L G + I DVT + HN
Sbjct: 61 PYAAQVAAEDCAKVAHEAGLRKVKVYVKGPGNGRESAIRSLHNAGIEVTEIIDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|332042697|gb|EGI78897.1| 30S ribosomal protein S11 [Lacinutrix algicola 5H-3-7-4]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ ++ + + + S G AH+ ++FNN I++T+ G+ I+WSS +GF GS+KN+
Sbjct: 1 MAKTNTKSTKKRKVIVESVGEAHITASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+ +D SA A+ G+ ++V V G G GR+SA+R++ G + I DVT + HN
Sbjct: 61 PYAAQLCAEDASAVAKEAGLKKVKVYVKGPGNGRESAIRSIHNAGIEVTEIIDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|78780013|ref|YP_398125.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9312]
gi|91207667|sp|Q318K6|RS11_PROM9 RecName: Full=30S ribosomal protein S11
gi|78713512|gb|ABB50689.1| SSU ribosomal protein S11P [Prochlorococcus marinus str. MIT 9312]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + ++N+ +G H+ STFNNT ++ITD G+ I+WSS GF G+RK +
Sbjct: 1 MAATVKKTGSKKSKRNVPNGVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|73748342|ref|YP_307581.1| 30S ribosomal protein S11 [Dehalococcoides sp. CBDB1]
gi|147669122|ref|YP_001213940.1| 30S ribosomal protein S11 [Dehalococcoides sp. BAV1]
gi|289432390|ref|YP_003462263.1| 30S ribosomal protein S11 [Dehalococcoides sp. GT]
gi|91207742|sp|Q3ZZP8|RS11_DEHSC RecName: Full=30S ribosomal protein S11
gi|189040412|sp|A5FRX0|RS11_DEHSB RecName: Full=30S ribosomal protein S11
gi|73660058|emb|CAI82665.1| ribosomal protein S11 [Dehalococcoides sp. CBDB1]
gi|146270070|gb|ABQ17062.1| SSU ribosomal protein S11P [Dehalococcoides sp. BAV1]
gi|288946110|gb|ADC73807.1| 30S ribosomal protein S11 [Dehalococcoides sp. GT]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +E+K I G+A+V +TFNNT +T+TD GN IAW+S GF GSRK +
Sbjct: 1 MAVKKRAGAKKKEKKVIPVGKAYVQATFNNTIVTLTDLQGNVIAWASCGTAGFKGSRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + KA G+ +EV V G G+GR++A+R+L+A G + +I DVT I HN
Sbjct: 61 PYAAQMAAQTAARKAAESGLRQVEVLVKGPGSGREAAIRSLQASGINVTAIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|163790169|ref|ZP_02184603.1| 30S ribosomal protein S11 [Carnobacterium sp. AT7]
gi|328958704|ref|YP_004376090.1| 30S ribosomal protein S11 [Carnobacterium sp. 17-4]
gi|159874660|gb|EDP68730.1| 30S ribosomal protein S11 [Carnobacterium sp. AT7]
gi|328675028|gb|AEB31074.1| 30S ribosomal protein S11 [Carnobacterium sp. 17-4]
Length = 128
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +R + R +KN+ SG AH+ STFNNT + ITD HGN I+WSS +GF GS+K++P
Sbjct: 1 MAKKVTR-KRRVKKNVESGVAHIRSTFNNTIVMITDVHGNAISWSSAGALGFRGSKKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + +GM ++EV V G G+GR++A+R+L+A G + +I DVT I HNG
Sbjct: 60 FAAQMAAEAAAKVSMENGMKTVEVAVKGPGSGREAAIRSLQATGLEVTAIRDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|152980206|ref|YP_001355077.1| 30S ribosomal protein S11 [Janthinobacterium sp. Marseille]
gi|166231816|sp|A6T3I0|RS11_JANMA RecName: Full=30S ribosomal protein S11
gi|151280283|gb|ABR88693.1| small subunit ribosomal protein S11 [Janthinobacterium sp.
Marseille]
Length = 134
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 64/123 (52%), Positives = 85/123 (69%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
R+R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++PFAAQVA
Sbjct: 12 RVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTPFAAQVA 71
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A G+ +LEV++ G G GR+SA+RAL +G I I DVT + HNGCRP KR
Sbjct: 72 AEAAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTPVPHNGCRPPKR 131
Query: 127 RRI 129
RRI
Sbjct: 132 RRI 134
>gi|159039807|ref|YP_001539060.1| 30S ribosomal protein S11 [Salinispora arenicola CNS-205]
gi|238061096|ref|ZP_04605805.1| 30S ribosomal protein S11 [Micromonospora sp. ATCC 39149]
gi|330470146|ref|YP_004407889.1| 30S ribosomal protein S11 [Verrucosispora maris AB-18-032]
gi|189040431|sp|A8M502|RS11_SALAI RecName: Full=30S ribosomal protein S11
gi|157918642|gb|ABW00070.1| ribosomal protein S11 [Salinispora arenicola CNS-205]
gi|237882907|gb|EEP71735.1| 30S ribosomal protein S11 [Micromonospora sp. ATCC 39149]
gi|328813117|gb|AEB47289.1| 30S ribosomal protein S11 [Verrucosispora maris AB-18-032]
Length = 135
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +ERKN+ G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 AVKKVRRKERKNVAHGQAHIKSTFNNTIVSITDPTGAVISWASAGQVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +A HGM ++V V G G+GR++A+R+L+A+G + I DVT HNGCRP
Sbjct: 70 QLAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQAVGLEVGQISDVTPQPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|313888776|ref|ZP_07822437.1| 30S ribosomal protein S11 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845145|gb|EFR32545.1| 30S ribosomal protein S11 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 131
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKS--PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R R R RKNI G AH+ STFNNT +T+TD +GN I+W+S +GF GSRK+
Sbjct: 1 MAKKQKATRARRRVRKNIEKGEAHIASTFNNTMVTLTDINGNVISWASAGQLGFRGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + KA+ HG+ S++V V G G+GR++A+R+L+A G + I DVT I H
Sbjct: 61 TPFAAQEAAQEAAEKAKEHGLKSVDVYVKGPGSGREAAIRSLQASGLEVTMIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|326332225|ref|ZP_08198505.1| 30S ribosomal protein S11 [Nocardioidaceae bacterium Broad-1]
gi|325949931|gb|EGD41991.1| 30S ribosomal protein S11 [Nocardioidaceae bacterium Broad-1]
Length = 133
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ ++IR +E+KN+ G AH+ STFNNT +TITDP G I+W+S VGF GSRK++PFA
Sbjct: 7 QGATKIRRKEKKNVAQGEAHIKSTFNNTIVTITDPTGAVISWASAGTVGFKGSRKSTPFA 66
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + +A +HGM ++V V G G+GR++A+R+L AIG + +I DVT HNGCR
Sbjct: 67 AQMAAEAAGRRAMDHGMKKIDVFVKGPGSGRETAIRSLGAIGLEVGTIQDVTPAPHNGCR 126
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 127 PPKRRRV 133
>gi|310644173|ref|YP_003948932.1| 30S ribosomal protein s11 [Paenibacillus polymyxa SC2]
gi|309249124|gb|ADO58691.1| 30S ribosomal protein S11 [Paenibacillus polymyxa SC2]
Length = 131
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/128 (56%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI SG AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIESGVAHIRSTFNNTIVTITDPHGNAISWASSGGMGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT + HNGC
Sbjct: 64 AAQMAAETAAKAAMEHGMKTVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|328675430|gb|AEB28105.1| SSU ribosomal protein S11p (S14e) [Francisella cf. novicida 3523]
Length = 129
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADMAAEYGVKNVDVLVKGPGSGRDSAVRALNAKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|295838430|ref|ZP_06825363.1| 30S ribosomal protein S11 [Streptomyces sp. SPB74]
gi|302519633|ref|ZP_07271975.1| 30S ribosomal protein S11 [Streptomyces sp. SPB78]
gi|318058102|ref|ZP_07976825.1| 30S ribosomal protein S11 [Streptomyces sp. SA3_actG]
gi|318076045|ref|ZP_07983377.1| 30S ribosomal protein S11 [Streptomyces sp. SA3_actF]
gi|197695772|gb|EDY42705.1| 30S ribosomal protein S11 [Streptomyces sp. SPB74]
gi|302428528|gb|EFL00344.1| 30S ribosomal protein S11 [Streptomyces sp. SPB78]
Length = 134
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +E+KN+ G AH+ STFNNT I+ITDP GN I+W+S VGF GSRK++PFAA
Sbjct: 9 ATKKVRRKEKKNVAHGHAHIKSTFNNTIISITDPTGNVISWASAGHVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP
Sbjct: 69 QMAAESAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPTPHNGCRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 PKRRRV 134
>gi|167626784|ref|YP_001677284.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667364|ref|ZP_04754942.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875914|ref|ZP_05248624.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|189040416|sp|B0U0W7|RS11_FRAP2 RecName: Full=30S ribosomal protein S11
gi|158523430|gb|ABW70828.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596785|gb|ABZ86783.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841935|gb|EET20349.1| 30S ribosomal protein S11 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 129
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + ++ + AH+ S+FNNT +TITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKSVRSSKKKVKRVVTDAVAHIYSSFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + A +G+ +++V V G G+GRDSA+RAL A + SI DVT + HNG
Sbjct: 61 FAAQVAAERAADIAAEYGVKNVDVLVKGPGSGRDSAVRALNAKNLKVTSITDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|145596408|ref|YP_001160705.1| 30S ribosomal protein S11 [Salinispora tropica CNB-440]
gi|189040434|sp|A4XBM0|RS11_SALTO RecName: Full=30S ribosomal protein S11
gi|145305745|gb|ABP56327.1| SSU ribosomal protein S11P [Salinispora tropica CNB-440]
Length = 135
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +ERKN+ G+AH+ STFNNT +++TDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 AVKKVRRKERKNVAHGQAHIKSTFNNTIVSVTDPTGAVISWASAGQVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +A HGM ++V V G G+GR++A+R+L+A+G + I DVT HNGCRP
Sbjct: 70 QLAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQAVGLEVGQISDVTPQPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|15612724|ref|NP_241027.1| 30S ribosomal protein S11 [Bacillus halodurans C-125]
gi|6094146|sp|O50633|RS11_BACHD RecName: Full=30S ribosomal protein S11
gi|2760184|dbj|BAA24193.1| ribosomal protein S11 [Bacillus halodurans]
gi|4512430|dbj|BAA75297.1| rpsK homologue (identity of 82% to B. subtilis ) [Bacillus
halodurans]
gi|10172773|dbj|BAB03880.1| 30S ribosomal protein S11 [Bacillus halodurans C-125]
Length = 129
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 95/129 (73%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R+RKN+ +G AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++P
Sbjct: 1 MAKKTNTRKRRQRKNVETGVAHIRSTFNNTIVTITDPHGNAISWASAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HGM S+EV V G GAGR++A+R+L+A+G + I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGMKSIEVSVKGPGAGREAAIRSLQAVGLEVNMIKDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|302869944|ref|YP_003838581.1| 30S ribosomal protein S11 [Micromonospora aurantiaca ATCC 27029]
gi|315501405|ref|YP_004080292.1| 30S ribosomal protein s11 [Micromonospora sp. L5]
gi|302572803|gb|ADL49005.1| 30S ribosomal protein S11 [Micromonospora aurantiaca ATCC 27029]
gi|315408024|gb|ADU06141.1| 30S ribosomal protein S11 [Micromonospora sp. L5]
Length = 135
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +ERKN+ G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 AVKKVRRKERKNVAHGQAHIKSTFNNTIVSITDPTGAVISWASSGQVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +A HGM ++V V G G+GR++A+R+L+A+G + I DVT HNGCRP
Sbjct: 70 QLAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQAVGLEVGQISDVTPQPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|229153914|ref|ZP_04282044.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 4342]
gi|228629595|gb|EEK86292.1| 30S ribosomal protein S11 [Bacillus cereus ATCC 4342]
Length = 129
Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRKKRVKKNIEAGVAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +LEV V G GAGR++ +RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLKTLEVTVKGPGAGREAVIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|259500917|ref|ZP_05743819.1| 30S ribosomal protein S11 [Lactobacillus iners DSM 13335]
gi|302190630|ref|ZP_07266884.1| 30S ribosomal protein S11 [Lactobacillus iners AB-1]
gi|309803674|ref|ZP_07697764.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 11V1-d]
gi|309804977|ref|ZP_07699035.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 09V1-c]
gi|309806718|ref|ZP_07700713.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 03V1-b]
gi|309808406|ref|ZP_07702305.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 01V1-a]
gi|309809124|ref|ZP_07702997.1| 30S ribosomal protein S11 [Lactobacillus iners SPIN 2503V10-D]
gi|312871304|ref|ZP_07731402.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 3008A-a]
gi|312872672|ref|ZP_07732737.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2062A-h1]
gi|312874058|ref|ZP_07734093.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2052A-d]
gi|312874956|ref|ZP_07734975.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2053A-b]
gi|315654001|ref|ZP_07906917.1| 30S ribosomal protein S11 [Lactobacillus iners ATCC 55195]
gi|325912334|ref|ZP_08174730.1| 30S ribosomal protein S11 [Lactobacillus iners UPII 143-D]
gi|325913207|ref|ZP_08175576.1| 30S ribosomal protein S11 [Lactobacillus iners UPII 60-B]
gi|329920632|ref|ZP_08277319.1| 30S ribosomal protein S11 [Lactobacillus iners SPIN 1401G]
gi|259167611|gb|EEW52106.1| 30S ribosomal protein S11 [Lactobacillus iners DSM 13335]
gi|308164272|gb|EFO66529.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 11V1-d]
gi|308165737|gb|EFO67962.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 09V1-c]
gi|308166898|gb|EFO69082.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 03V1-b]
gi|308168234|gb|EFO70353.1| 30S ribosomal protein S11 [Lactobacillus iners LactinV 01V1-a]
gi|308170569|gb|EFO72589.1| 30S ribosomal protein S11 [Lactobacillus iners SPIN 2503V10-D]
gi|311089701|gb|EFQ48126.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2053A-b]
gi|311090398|gb|EFQ48807.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2052A-d]
gi|311091714|gb|EFQ50093.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 2062A-h1]
gi|311093318|gb|EFQ51664.1| 30S ribosomal protein S11 [Lactobacillus iners LEAF 3008A-a]
gi|315488697|gb|EFU78343.1| 30S ribosomal protein S11 [Lactobacillus iners ATCC 55195]
gi|325475805|gb|EGC78975.1| 30S ribosomal protein S11 [Lactobacillus iners UPII 143-D]
gi|325477471|gb|EGC80614.1| 30S ribosomal protein S11 [Lactobacillus iners UPII 60-B]
gi|328935890|gb|EGG32350.1| 30S ribosomal protein S11 [Lactobacillus iners SPIN 1401G]
Length = 129
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR++A+RAL+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAATKTAMDQGMKHVEVSVKGPGAGREAAIRALQATGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|94987422|ref|YP_595355.1| 30S ribosomal protein S11 [Lawsonia intracellularis PHE/MN1-00]
gi|123082135|sp|Q1MPP3|RS11_LAWIP RecName: Full=30S ribosomal protein S11
gi|94731671|emb|CAJ55034.1| ribosomal protein S11 [Lawsonia intracellularis PHE/MN1-00]
Length = 129
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RE+KNI G H+ ++FNNT IT TDP GNTI+W+S GF GSRK++P
Sbjct: 1 MAKPKRIGKKREKKNIPVGVVHIQASFNNTIITFTDPRGNTISWASSGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + +AQ++GM ++ + V G G+GR+SA+RA+ A+GF + I D+T I HNG
Sbjct: 61 FAAQVAAEQAARRAQDNGMRTVGIYVKGPGSGRESAMRAINAVGFKVAFIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|86739321|ref|YP_479721.1| 30S ribosomal protein S11 [Frankia sp. CcI3]
gi|123751488|sp|Q2JFF0|RS11_FRASC RecName: Full=30S ribosomal protein S11
gi|86566183|gb|ABD09992.1| SSU ribosomal protein S11P [Frankia sp. CcI3]
Length = 134
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 7 AAGAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 67 AAQMAAENAARKAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|330722392|gb|EGH00240.1| SSU ribosomal protein S11p (S14e) [gamma proteobacterium IMCC2047]
Length = 129
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + ++ +V G AH+ ++FNNT IT+TD GN ++W++ GF GSRK++P
Sbjct: 1 MAKPARKT-KKVKRTVVDGMAHIHASFNNTIITLTDRQGNALSWATSGGSGFRGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAAQVA + A +G+ +L+V V G G GR+SA+RAL GF I SI DVT I HN
Sbjct: 60 FAAQVAAERAGNAAAAEYGLKNLDVNVKGPGPGRESAVRALNNCGFNINSITDVTPIPHN 119
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 120 GCRPPKKRRV 129
>gi|331091641|ref|ZP_08340475.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403398|gb|EGG82957.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 131
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKTVDVFVKGPGSGREAAIRALQACGIDVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|325261519|ref|ZP_08128257.1| 30S ribosomal protein S11 [Clostridium sp. D5]
gi|324032973|gb|EGB94250.1| 30S ribosomal protein S11 [Clostridium sp. D5]
Length = 131
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKTVDVFVKGPGSGREAAIRALQACGIDVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|203284411|ref|YP_002222151.1| 30S ribosomal protein S11 [Borrelia duttonii Ly]
gi|203287945|ref|YP_002222960.1| 30S ribosomal protein S11 [Borrelia recurrentis A1]
gi|201083854|gb|ACH93445.1| 30S ribosomal protein S11 [Borrelia duttonii Ly]
gi|201085165|gb|ACH94739.1| 30S ribosomal protein S11 [Borrelia recurrentis A1]
Length = 129
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S + + +++I G ++ +TFNNT +T++D GNT+AW+S +GF G++K++P
Sbjct: 1 MSAKVSTNKRKVKRSIGEGNVYIQATFNNTIVTVSDIRGNTLAWASAGGMGFKGAKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ + K ++ G++ + V V G G GR+SA+RA+ + G + SI DVT I HNG
Sbjct: 61 YAAQMTAEAALGKVKDFGINYVHVFVKGPGIGRESAIRAVGSSGIIVKSISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP+K RR+
Sbjct: 121 CRPKKTRRV 129
>gi|303240946|ref|ZP_07327457.1| 30S ribosomal protein S11 [Acetivibrio cellulolyticus CD2]
gi|302591532|gb|EFL61269.1| 30S ribosomal protein S11 [Acetivibrio cellulolyticus CD2]
Length = 135
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K P+R + +ERKNI G AH+ STFNNT +T+TD GN ++WSS +GF GSRK++PFA
Sbjct: 10 KRPTR-KRKERKNIERGAAHIRSTFNNTIVTLTDVSGNALSWSSAGALGFRGSRKSTPFA 68
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 69 AQMAAETAAKAAMEHGLKTVEVYVKGPGSGREAAIRALQAAGLEVSLIKDVTPIPHNGCR 128
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 129 PPKRRRV 135
>gi|111023123|ref|YP_706095.1| 30S ribosomal protein S11 [Rhodococcus jostii RHA1]
gi|123339769|sp|Q0S3E9|RS11_RHOSR RecName: Full=30S ribosomal protein S11
gi|110822653|gb|ABG97937.1| 30S ribosomal protein S11 [Rhodococcus jostii RHA1]
Length = 137
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R R++KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 10 PKKTQKARRRDKKNVPHGAAHIKSTFNNTIVSITDPAGNVISWASSGHVGFKGSRKSTPF 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 70 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 129
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 130 RPPKRRRV 137
>gi|317123071|ref|YP_004103074.1| 30S ribosomal protein S11P [Thermaerobacter marianensis DSM 12885]
gi|315593051|gb|ADU52347.1| SSU ribosomal protein S11P [Thermaerobacter marianensis DSM 12885]
Length = 140
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 85/119 (71%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++RK++ G AH+ STFNNT +TITD GN IA+ S GF+GS+K +P+AAQ+A +
Sbjct: 22 KDRKHVERGIAHIRSTFNNTIVTITDLQGNAIAFGSGGTNGFTGSKKGTPYAAQLAAEQA 81
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +A HGM +EV V G G GR++A+R+L+A G + +I DVT I HNGCRP KRRR+
Sbjct: 82 AREAMEHGMREVEVWVKGPGPGREAAIRSLQATGLEVTAIKDVTPIPHNGCRPPKRRRV 140
>gi|104773567|ref|YP_618547.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513564|ref|YP_812470.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275666|sp|Q04BZ0|RS11_LACDB RecName: Full=30S ribosomal protein S11
gi|122984008|sp|Q1GBJ3|RS11_LACDA RecName: Full=30S ribosomal protein S11
gi|103422648|emb|CAI97256.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092879|gb|ABJ58032.1| SSU ribosomal protein S11P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125199|gb|ADY84529.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 129
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MPAKKTAHKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G G+GR+SA+RAL+A G I SI DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAIDQGMKHIEVSVKGPGSGRESAIRALQAAGLEITSIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|157363468|ref|YP_001470235.1| 30S ribosomal protein S11 [Thermotoga lettingae TMO]
gi|172045984|sp|A8F4T7|RS11_THELT RecName: Full=30S ribosomal protein S11
gi|157314072|gb|ABV33171.1| ribosomal protein S11 [Thermotoga lettingae TMO]
Length = 128
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
Query: 5 PSRIRNRERKNI--VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
R ++++ I G H+ STFNNT IT++D G TI WSS GF G+RK +P+A
Sbjct: 2 ARRSEGKKKRKILTDRGVVHIKSTFNNTVITLSDADGATILWSSGGTAGFEGTRKGTPYA 61
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A D + +A G+ ++V V G G GR++A+R L+A G + SI DVT I NGCR
Sbjct: 62 AQLAADKIAKEALRLGIKRVDVLVKGPGPGREAAIRTLQAAGLEVDSIKDVTPIPFNGCR 121
Query: 123 PRKRRRI 129
P+K+RR+
Sbjct: 122 PKKKRRV 128
>gi|302543335|ref|ZP_07295677.1| 30S ribosomal protein S11 [Streptomyces hygroscopicus ATCC 53653]
gi|307328056|ref|ZP_07607237.1| 30S ribosomal protein S11 [Streptomyces violaceusniger Tu 4113]
gi|297159623|gb|ADI09335.1| 30S ribosomal protein S11 [Streptomyces bingchenggensis BCW-1]
gi|302460953|gb|EFL24046.1| 30S ribosomal protein S11 [Streptomyces himastatinicus ATCC 53653]
gi|306886361|gb|EFN17366.1| 30S ribosomal protein S11 [Streptomyces violaceusniger Tu 4113]
Length = 134
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 66/125 (52%), Positives = 92/125 (73%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAAQ
Sbjct: 10 AKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGNVISWASAGHVGFKGSRKSTPFAAQ 69
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP
Sbjct: 70 MAAESAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPTPHNGCRPP 129
Query: 125 KRRRI 129
KRRR+
Sbjct: 130 KRRRV 134
>gi|86132568|ref|ZP_01051161.1| 30S ribosomal protein S11 [Dokdonia donghaensis MED134]
gi|85816810|gb|EAQ37995.1| 30S ribosomal protein S11 [Dokdonia donghaensis MED134]
Length = 127
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ R +++ G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKQTAKKRKVVVESV--GEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A +DC+ A G+ ++V V G G GR+SA+RA+ G + I D+T + HNG
Sbjct: 59 YAAQTAAEDCAKVAHEAGLRKVKVYVKGPGNGRESAIRAVHNSGIEVTEIIDITPMPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|224531869|ref|ZP_03672501.1| ribosomal protein S11 [Borrelia valaisiana VS116]
gi|224511334|gb|EEF81740.1| ribosomal protein S11 [Borrelia valaisiana VS116]
Length = 130
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 86/128 (67%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + + + ++NI G ++ +TFNNT +T++D GN +AW+S +GF G++K++P+
Sbjct: 3 AKLSTNSKKKIKRNIGEGNVYIQATFNNTIVTVSDIKGNALAWASAGGMGFKGAKKSTPY 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+ + K ++ G++ + V + G G GR+SA+RA+ + G T+ SI D+T I HNGC
Sbjct: 63 AAQITAESALNKVRDFGINYVHVYIKGPGIGRESAIRAIGSTGMTVKSISDITPIPHNGC 122
Query: 122 RPRKRRRI 129
RP+K RR+
Sbjct: 123 RPKKTRRV 130
>gi|149197865|ref|ZP_01874914.1| 30S ribosomal protein S11 [Lentisphaera araneosa HTCC2155]
gi|149139086|gb|EDM27490.1| 30S ribosomal protein S11 [Lentisphaera araneosa HTCC2155]
Length = 144
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
Query: 3 KSPSRIRNRERK---NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
K +R + + + N+ +G HVV+TFNNT+++++D HGN +AWSS +GF GSRK++
Sbjct: 15 KQVTRKKGAKGRTPVNVTNGIVHVVATFNNTKVSVSDVHGNVLAWSSAGKMGFKGSRKST 74
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ+ + + +A +GM +EV+V G GAGR+SA+R + A G I I DVT I HN
Sbjct: 75 AYAAQLVATEAAKRAMTYGMREVEVRVKGPGAGRESAVRGVSAAGLDISLIKDVTPIPHN 134
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 135 GCRPPKRRRV 144
>gi|329121854|ref|ZP_08250469.1| 30S ribosomal protein S11 [Dialister micraerophilus DSM 19965]
gi|327467792|gb|EGF13284.1| 30S ribosomal protein S11 [Dialister micraerophilus DSM 19965]
Length = 127
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 71/126 (56%), Positives = 94/126 (74%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + + RERK++ +G AH+ STFNNT +TITD +GNTI+W+S +GF GSRK++PFAA
Sbjct: 2 ATVKSKRRERKHVETGAAHIRSTFNNTIVTITDSNGNTISWASAGELGFRGSRKSTPFAA 61
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + A +HGM S +V V G GAGR++A+RAL+A G I SI DVT I HNGCRP
Sbjct: 62 QMAAEKAAKVAIDHGMRSADVFVKGPGAGREAAIRALQAAGIEISSIKDVTPIPHNGCRP 121
Query: 124 RKRRRI 129
KRRRI
Sbjct: 122 PKRRRI 127
>gi|269217220|ref|ZP_06161074.1| 30S ribosomal protein S11 [Slackia exigua ATCC 700122]
gi|269129357|gb|EEZ60442.1| 30S ribosomal protein S11 [Slackia exigua ATCC 700122]
Length = 131
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSP--SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K +R++ ERKNI G+AH+ STFNNT ++ITDP GN I+W+S VGF GSRK+
Sbjct: 1 MAKKNVRTRVKRSERKNIAVGQAHIKSTFNNTIVSITDPQGNVISWNSAGTVGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + + A HG+ + V V G G+GR++A+R+L+A G + SI D T I H
Sbjct: 61 TPFAAQMAAEQAAKNAMEHGLKKVSVFVKGPGSGRETAIRSLQAAGLEVTSIQDCTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPCKRRRV 131
>gi|323342813|ref|ZP_08083045.1| 30S ribosomal protein S11 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463925|gb|EFY09119.1| 30S ribosomal protein S11 [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 129
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 88/128 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R RKNI G AH+ STFNNT +TI+D GN IAWSS +GF GSRK++P
Sbjct: 1 MAKAKVARKRRVRKNIARGVAHIHSTFNNTIVTISDEQGNVIAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A++ + A +HGM ++EV V G G GR+SA+RAL+ G I I DVT + HNG
Sbjct: 61 YAAQMASEAAAKAAVDHGMKTVEVSVKGPGPGRESAVRALQVAGLEISVINDVTPVPHNG 120
Query: 121 CRPRKRRR 128
CRP KR R
Sbjct: 121 CRPPKRPR 128
>gi|296394892|ref|YP_003659776.1| 30S ribosomal protein S11 [Segniliparus rotundus DSM 44985]
gi|296182039|gb|ADG98945.1| 30S ribosomal protein S11 [Segniliparus rotundus DSM 44985]
Length = 134
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R RE+KNI +G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PF
Sbjct: 7 AAGVKKVRRREKKNIPNGAAHIKSTFNNTIVSITDPEGNVIAWASSGHVGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 67 AAQLAAENAARKAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLEVGNISDVTPQPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|167759835|ref|ZP_02431962.1| hypothetical protein CLOSCI_02198 [Clostridium scindens ATCC 35704]
gi|210611152|ref|ZP_03288766.1| hypothetical protein CLONEX_00956 [Clostridium nexile DSM 1787]
gi|225571580|ref|ZP_03780576.1| hypothetical protein CLOHYLEM_07678 [Clostridium hylemonae DSM
15053]
gi|325663036|ref|ZP_08151486.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086643|ref|ZP_08335720.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|167662454|gb|EDS06584.1| hypothetical protein CLOSCI_02198 [Clostridium scindens ATCC 35704]
gi|210152139|gb|EEA83146.1| hypothetical protein CLONEX_00956 [Clostridium nexile DSM 1787]
gi|225159657|gb|EEG72276.1| hypothetical protein CLOHYLEM_07678 [Clostridium hylemonae DSM
15053]
gi|325470490|gb|EGC73720.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409809|gb|EGG89244.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 131
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKSVDVMVKGPGSGREAAIRALQACGIDVTSIKDVTPVPHNGCRPPKRRRV 131
>gi|311693293|gb|ADP96166.1| ribosomal protein S11, bacterial-type [marine bacterium HP15]
Length = 118
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 59/117 (50%), Positives = 84/117 (71%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+K +V G AH+ ++FNNT +TI+D GN ++W++ GF GSRK++PFAAQVA +
Sbjct: 2 KKTVVDGVAHIHASFNNTIVTISDRQGNVLSWATSGGSGFRGSRKSTPFAAQVAAERAGN 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A +G+ +L+V+V G G GR+SA+RAL A G+ I +I DVT I HNGCRP K+RR+
Sbjct: 62 AAAEYGLKNLDVEVKGPGPGRESAVRALNACGYKITNITDVTPIPHNGCRPPKKRRV 118
>gi|167771241|ref|ZP_02443294.1| hypothetical protein ANACOL_02599 [Anaerotruncus colihominis DSM
17241]
gi|167666492|gb|EDS10622.1| hypothetical protein ANACOL_02599 [Anaerotruncus colihominis DSM
17241]
Length = 134
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNNT +TITD GN ++W+S +GF GSRK++PFAAQ A + + A
Sbjct: 20 NIERGAAHIQSTFNNTIVTITDTQGNALSWASAGGLGFRGSRKSTPFAAQTAAEVAAKAA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 80 MEHGLKTVEVFVKGPGSGREAAIRALQAAGLEVNMIKDVTPIPHNGCRPPKRRRV 134
>gi|123969276|ref|YP_001010134.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. AS9601]
gi|254525845|ref|ZP_05137897.1| ribosomal protein S11 [Prochlorococcus marinus str. MIT 9202]
gi|152060809|sp|A2BTB6|RS11_PROMS RecName: Full=30S ribosomal protein S11
gi|123199386|gb|ABM71027.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. AS9601]
gi|221537269|gb|EEE39722.1| ribosomal protein S11 [Prochlorococcus marinus str. MIT 9202]
Length = 130
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + ++N+ +G H+ STFNNT ++ITD G+ I+WSS GF G+RK +
Sbjct: 1 MAATVKKTGSKKSKRNVPNGVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G GAGR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGAGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|284049232|ref|YP_003399571.1| 30S ribosomal protein S11 [Acidaminococcus fermentans DSM 20731]
gi|283953453|gb|ADB48256.1| 30S ribosomal protein S11 [Acidaminococcus fermentans DSM 20731]
Length = 130
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + + KNI +G AH+ STFNNT +TI+D +G ++W+S GF GSRK++
Sbjct: 1 MAGKKVVRNKRKVSKNIEAGVAHIRSTFNNTIVTISDLNGAVLSWASAGGQGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ +EV V G GAGR++A+RAL+A G + SI DVT I HN
Sbjct: 61 PFAAQMAAETAAKAAMEHGLKRIEVFVKGPGAGREAAIRALQAAGLEVESIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|311744780|ref|ZP_07718576.1| 30S ribosomal protein S11 [Aeromicrobium marinum DSM 15272]
gi|311311897|gb|EFQ81818.1| 30S ribosomal protein S11 [Aeromicrobium marinum DSM 15272]
Length = 132
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 87/125 (69%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KN+V G AH+ STFNNT +TITDP G IAW+S VGF GSRK++PFAA
Sbjct: 8 TKKVRRKEKKNVVQGEAHIKSTFNNTHVTITDPSGAVIAWASGGTVGFKGSRKSTPFAAG 67
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + +A HGM ++V V G G+GR++A+R+L +G + +I DVT HNGCRP
Sbjct: 68 MAAEAAGRQAMEHGMKKVDVFVKGPGSGRETAIRSLSGVGLDVGTISDVTPSPHNGCRPP 127
Query: 125 KRRRI 129
K RR+
Sbjct: 128 KHRRL 132
>gi|225010540|ref|ZP_03701011.1| ribosomal protein S11 [Flavobacteria bacterium MS024-3C]
gi|225005369|gb|EEG43320.1| ribosomal protein S11 [Flavobacteria bacterium MS024-3C]
Length = 130
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ ++ + + I S G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+
Sbjct: 1 MAKANTKATKKRKVIIESVGEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A++DC+ A G+ ++V V G G GR+SA+R++ G + I DVT + HN
Sbjct: 61 PYAAQLASEDCAKVAHEAGLRKVKVYVKGPGNGRESAIRSIHNAGIEVTEIIDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|227538694|ref|ZP_03968743.1| ribosomal protein S11 [Sphingobacterium spiritivorum ATCC 33300]
gi|300770227|ref|ZP_07080106.1| 30S ribosomal protein S11 [Sphingobacterium spiritivorum ATCC
33861]
gi|227241613|gb|EEI91628.1| ribosomal protein S11 [Sphingobacterium spiritivorum ATCC 33300]
gi|300762703|gb|EFK59520.1| 30S ribosomal protein S11 [Sphingobacterium spiritivorum ATCC
33861]
Length = 129
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 55/113 (48%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ +TFNN +T+T+ G TI+WSS +GF GS+KN+P+AA A DC A +
Sbjct: 17 PVGQAHINATFNNIIVTLTNNQGQTISWSSAGKMGFRGSKKNTPYAASQAASDCGKVAHD 76
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +EV V G GAGR+SA+R L+ +G + +I D+T + HNGCRP KRRR+
Sbjct: 77 LGLRKVEVFVKGPGAGRESAIRTLQTVGIDVTTIKDITPLPHNGCRPPKRRRV 129
>gi|153939529|ref|YP_001392807.1| 30S ribosomal protein S11 [Clostridium botulinum F str. Langeland]
gi|168178859|ref|ZP_02613523.1| ribosomal protein S11 [Clostridium botulinum NCTC 2916]
gi|226950906|ref|YP_002805997.1| ribosomal protein S11 [Clostridium botulinum A2 str. Kyoto]
gi|171769266|sp|A7GJ47|RS11_CLOBL RecName: Full=30S ribosomal protein S11
gi|254765375|sp|C1FMS4|RS11_CLOBJ RecName: Full=30S ribosomal protein S11
gi|152935425|gb|ABS40923.1| 30S ribosomal protein S11 [Clostridium botulinum F str. Langeland]
gi|182670222|gb|EDT82198.1| ribosomal protein S11 [Clostridium botulinum NCTC 2916]
gi|226841124|gb|ACO83790.1| ribosomal protein S11 [Clostridium botulinum A2 str. Kyoto]
gi|295320787|gb|ADG01165.1| 30S ribosomal protein S11 [Clostridium botulinum F str. 230613]
gi|322807779|emb|CBZ05354.1| SSU ribosomal protein S11p (S14e) [Clostridium botulinum H04402
065]
Length = 132
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAKVA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|317505827|ref|ZP_07963672.1| 30S ribosomal protein S11 [Segniliparus rugosus ATCC BAA-974]
gi|316255909|gb|EFV15134.1| 30S ribosomal protein S11 [Segniliparus rugosus ATCC BAA-974]
Length = 134
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R RE+KN+ +G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PF
Sbjct: 7 AAGVKKVRRREKKNVPNGAAHIKSTFNNTIVSITDPEGNVIAWASSGHVGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 67 AAQLAAENAARKAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLEVGNISDVTPQPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|126697066|ref|YP_001091952.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9301]
gi|152060805|sp|A3PF26|RS11_PROM0 RecName: Full=30S ribosomal protein S11
gi|126544109|gb|ABO18351.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9301]
Length = 130
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MP + + + ++N+ +G H+ STFNNT ++ITD G+ I+WSS GF G+RK +
Sbjct: 1 MPATVKKTGSKKSKRNVPNGVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G GAGR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGAGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|255536130|ref|YP_003096501.1| SSU ribosomal protein S11p (S14e) [Flavobacteriaceae bacterium
3519-10]
gi|255342326|gb|ACU08439.1| SSU ribosomal protein S11p (S14e) [Flavobacteriaceae bacterium
3519-10]
Length = 129
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ R+ K G AH+ +TFNN I++T+ G I+W+S +GF GS+KN+P
Sbjct: 1 MAKQTKVVKKRKVKVEAIGEAHIQATFNNIIISLTNKSGEVISWASAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A ++CS A + G+ + V V G GAGR+SA+R + G + I DVT + HNG
Sbjct: 61 FAAQMAAENCSQVAHDAGLRRVRVFVKGPGAGRESAIRTIHNSGIEVSEIVDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|256821685|ref|YP_003145648.1| 30S ribosomal protein S11 [Kangiella koreensis DSM 16069]
gi|256795224|gb|ACV25880.1| ribosomal protein S11 [Kangiella koreensis DSM 16069]
Length = 129
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KSP + + +K++V G AH+ ++FNNT +TITD GN +AW++ GF GSRK++P
Sbjct: 1 MAKSPRTTKKKVKKHVVDGMAHIHASFNNTIVTITDRQGNALAWATSGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA D + + GM ++EV V G G GR+SA+RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAADRAAQVVKEMGMKNVEVFVKGPGPGRESAVRALNAAGFKITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|15896357|ref|NP_349706.1| 30S ribosomal protein S11 [Clostridium acetobutylicum ATCC 824]
gi|48474935|sp|Q97EK4|RS11_CLOAB RecName: Full=30S ribosomal protein S11
gi|15026172|gb|AAK81046.1|AE007807_4 Ribosomal protein S11 [Clostridium acetobutylicum ATCC 824]
gi|325510513|gb|ADZ22149.1| 30S ribosomal protein S11 [Clostridium acetobutylicum EA 2018]
Length = 131
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 83/114 (72%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G AH+ STFNN+ +TITD +GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 18 IEHGCAHIKSTFNNSIVTITDVNGNALSWSSAGGLGFKGSRKSTPFAAQMAAETAAKTAM 77
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 EHGLKSVDVFVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 131
>gi|187918367|ref|YP_001883930.1| 30S ribosomal protein S11 [Borrelia hermsii DAH]
gi|119861215|gb|AAX17010.1| SSU ribosomal protein S11P [Borrelia hermsii DAH]
Length = 129
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S + + +++I G ++ +TFNNT +T++D GNT+AW+S +GF G++K++P
Sbjct: 1 MSAKVSTNKKKVKRSIGEGNVYIQATFNNTIVTVSDIRGNTLAWASAGGMGFKGAKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ + K ++ G++ + V V G G GR+SA+RA+ + G + SI DVT I HNG
Sbjct: 61 YAAQMTAEAALGKVKDFGINYVHVFVKGPGIGRESAIRAVGSTGIIVKSISDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP+K RR+
Sbjct: 121 CRPKKTRRV 129
>gi|304405590|ref|ZP_07387249.1| 30S ribosomal protein S11 [Paenibacillus curdlanolyticus YK9]
gi|304345629|gb|EFM11464.1| 30S ribosomal protein S11 [Paenibacillus curdlanolyticus YK9]
Length = 131
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 71/128 (55%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI +G AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIDTGVAHIRSTFNNTIVTITDPHGNAISWASSGNLGFKGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM +EV V G GAGR++A+R+L+A G + I DVT + HNGC
Sbjct: 64 AAQMAAETAAKAAMEHGMKVVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|283853177|ref|ZP_06370430.1| ribosomal protein S11 [Desulfovibrio sp. FW1012B]
gi|283571435|gb|EFC19442.1| ribosomal protein S11 [Desulfovibrio sp. FW1012B]
Length = 128
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R +ERKNI G AH+ +TFNNT +T TD GN ++W++ GF GSRK++P
Sbjct: 1 MAK-PRRTGKKERKNIPVGVAHIQATFNNTIVTFTDQKGNVVSWATSGGAGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA ++ + KAQ +GM ++ + V G G+GR++A+RA+ GF + I D+T I HNG
Sbjct: 60 FAAQVAAENAARKAQENGMRTVGILVKGPGSGREAAMRAIHNAGFKVSFIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|126662240|ref|ZP_01733239.1| 30S ribosomal protein S11 [Flavobacteria bacterium BAL38]
gi|126625619|gb|EAZ96308.1| 30S ribosomal protein S11 [Flavobacteria bacterium BAL38]
Length = 127
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ ++ R + SG AH+ +TFNN I++T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKATAKKRKVIVE--SSGEAHINATFNNIIISLTNKKGEVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A G+ ++V V G G GR+SA+R++ G + I DVT + HNG
Sbjct: 59 YAAQMAAEDCSKVALEAGLKKVKVYVKGPGNGRESAIRSIHNSGVEVTEIIDVTPMPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|37912968|gb|AAR05300.1| ribosomal protein S11 [uncultured marine gamma proteobacterium
EB000-45B06]
gi|40063199|gb|AAR38036.1| ribosomal protein S11 [uncultured marine bacterium 562]
Length = 125
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 61/114 (53%), Positives = 80/114 (70%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AH+ S+FNNT +TITD GNT+ W++ GF GSRK++PFAAQ+A D A+
Sbjct: 12 VTDGVAHIHSSFNNTIVTITDKQGNTVCWATSGGSGFKGSRKSTPFAAQIAADKAGNAAK 71
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +L+VKV G G GR+SA+R+L A G I SI DVT + HNGCRP K+RR+
Sbjct: 72 EFGMINLDVKVKGPGGGRESAIRSLNACGLKIKSITDVTPLPHNGCRPSKKRRV 125
>gi|170759862|ref|YP_001788794.1| 30S ribosomal protein S11 [Clostridium botulinum A3 str. Loch
Maree]
gi|226708349|sp|B1KSJ8|RS11_CLOBM RecName: Full=30S ribosomal protein S11
gi|169406851|gb|ACA55262.1| 30S ribosomal protein S11 [Clostridium botulinum A3 str. Loch
Maree]
Length = 132
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAKTA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|154505143|ref|ZP_02041881.1| hypothetical protein RUMGNA_02656 [Ruminococcus gnavus ATCC 29149]
gi|153794622|gb|EDN77042.1| hypothetical protein RUMGNA_02656 [Ruminococcus gnavus ATCC 29149]
Length = 131
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 17 NVERGQAHIQSSFNNTIVTLTDTQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G +VSI DVT + HNGCRP KRRR+
Sbjct: 77 LVHGLKTVDVFVKGPGSGREAAIRALQACGIDVVSIKDVTPVPHNGCRPPKRRRV 131
>gi|268609566|ref|ZP_06143293.1| 30S ribosomal protein S11 [Ruminococcus flavefaciens FD-1]
Length = 134
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRI-----RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M + + R RERKNI SG H+ STFNNT +TITD GN I+W+S +GF GS
Sbjct: 1 MAQQKGKKVTTIRRRRERKNIESGAVHIQSTFNNTIVTITDTAGNAISWASAGELGFRGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
+K++PFAAQ A + + A HG+ ++EV V G GAGR++A+RAL+ +G + I DVT
Sbjct: 61 KKSTPFAAQTAAETAAKAAMEHGLKNVEVYVKGPGAGREAAIRALQTVGLEVRMIKDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
I HNGCRP KRRR+
Sbjct: 121 IPHNGCRPPKRRRV 134
>gi|119718097|ref|YP_925062.1| 30S ribosomal protein S11 [Nocardioides sp. JS614]
gi|152060801|sp|A1SNJ0|RS11_NOCSJ RecName: Full=30S ribosomal protein S11
gi|119538758|gb|ABL83375.1| SSU ribosomal protein S11P [Nocardioides sp. JS614]
Length = 135
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 89/128 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ G AH+ STFNNT +TITDP G I+W+S VGF GSRK++PF
Sbjct: 8 AAGAKKVRRKEKKNVAMGEAHIKSTFNNTIVTITDPTGAVISWASAGTVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + +A HGM ++V V G G+GR++A+R+L AIG + +I DVT HNGC
Sbjct: 68 AAQMAAEAAGRRAMEHGMKKIDVFVKGPGSGRETAIRSLGAIGLEVGTIQDVTPTPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|225011670|ref|ZP_03702108.1| ribosomal protein S11 [Flavobacteria bacterium MS024-2A]
gi|225004173|gb|EEG42145.1| ribosomal protein S11 [Flavobacteria bacterium MS024-2A]
Length = 127
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ S+ R ++I G AHV ++FNN I++T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKTASKKRKVIVESI--GEAHVTASFNNIIISLTNTKGEVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A +DC+ AQ G+ ++V V G G GR+SA+R+L G ++ I D+T + HNG
Sbjct: 59 YAAQTAAEDCAKVAQEAGLRKVKVFVKGPGNGRESAIRSLHNAGIEVMEIVDITPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|242278682|ref|YP_002990811.1| 30S ribosomal protein S11 [Desulfovibrio salexigens DSM 2638]
gi|259494620|sp|C6C1A9|RS11_DESAD RecName: Full=30S ribosomal protein S11
gi|242121576|gb|ACS79272.1| ribosomal protein S11 [Desulfovibrio salexigens DSM 2638]
Length = 129
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +E+KN+ G AHV +TFNNT IT TD GN I+W++ GF GSRK++P
Sbjct: 1 MARPRRSGKKKEKKNVPVGIAHVKATFNNTIITFTDLKGNVISWATSGASGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + KAQ+ GM ++ + V G G+GR++A+RA+ +G + I D+T I HNG
Sbjct: 61 FAAQVAAETAARKAQDQGMRTVGIFVKGPGSGREAAMRAIGNVGMKVNFIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|116072178|ref|ZP_01469446.1| 30S ribosomal protein S11 [Synechococcus sp. BL107]
gi|116065801|gb|EAU71559.1| 30S ribosomal protein S11 [Synechococcus sp. BL107]
Length = 130
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + ++N+ +G AH+ STFNNT ++I+D G IAWSS GF G+RK +
Sbjct: 1 MAKTAKKSGPKKAKRNVPNGVAHIQSTFNNTIVSISDTAGEVIAWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|111220572|ref|YP_711366.1| 30S ribosomal protein S11 [Frankia alni ACN14a]
gi|123143522|sp|Q0RRP5|RS11_FRAAA RecName: Full=30S ribosomal protein S11
gi|111148104|emb|CAJ59772.1| 30S ribosomal subunit protein S11 [Frankia alni ACN14a]
Length = 134
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 7 AAGAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGNVISWASAGHVGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 67 AAQMAAENAARKAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|289641140|ref|ZP_06473308.1| ribosomal protein S11 [Frankia symbiont of Datisca glomerata]
gi|289509081|gb|EFD30012.1| ribosomal protein S11 [Frankia symbiont of Datisca glomerata]
Length = 134
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 7 AAGIKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 67 AAQMAAENAARKAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|195941638|ref|ZP_03087020.1| 30S ribosomal protein S11 [Borrelia burgdorferi 80a]
Length = 130
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 87/128 (67%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K + + + ++NI G ++ +TFNNT +T++D GN +AW+S +GF G++K++P+
Sbjct: 3 AKLSTNSKKKIKRNIGEGNVYIQATFNNTIVTVSDIRGNALAWASAGGMGFKGAKKSTPY 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+ + K ++ G++ + V + G G GR+SA+RA+ +IG T+ SI D+T I HNGC
Sbjct: 63 AAQITAESALNKVRDFGINYVHVYIKGPGIGRESAIRAIGSIGMTVKSISDITPIPHNGC 122
Query: 122 RPRKRRRI 129
RP+K RR+
Sbjct: 123 RPKKTRRV 130
>gi|148273769|ref|YP_001223330.1| 30S ribosomal protein S11 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|170780765|ref|YP_001709097.1| 30S ribosomal protein S11 [Clavibacter michiganensis subsp.
sepedonicus]
gi|172047232|sp|A5CU81|RS11_CLAM3 RecName: Full=30S ribosomal protein S11
gi|189040407|sp|B0RB71|RS11_CLAMS RecName: Full=30S ribosomal protein S11
gi|147831699|emb|CAN02668.1| 30S ribosomal protein S11 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|169155333|emb|CAQ00436.1| 30S ribosomal protein S11 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 132
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 95/127 (74%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ + R +++KNI G+AH+ STFNNT ++ITDP G I+W+S VVG++GSRK++PFA
Sbjct: 6 SAVRKPRRKDKKNIAVGQAHIKSTFNNTIVSITDPTGAVISWASSGVVGYNGSRKSTPFA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGCR
Sbjct: 66 AQLAAESAARQAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSINDVTPQAHNGCR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|308070948|ref|YP_003872553.1| 30S ribosomal protein S11 [Paenibacillus polymyxa E681]
gi|305860227|gb|ADM72015.1| 30S ribosomal protein S11 [Paenibacillus polymyxa E681]
Length = 131
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 71/128 (55%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK R + R+RKNI +G AH+ STFNNT +TITDPHGN I+W+S +GF GSRK++PF
Sbjct: 4 PKKVVRTKRRDRKNIETGVAHIRSTFNNTIVTITDPHGNAISWASSGGMGFRGSRKSTPF 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + A HGM ++EV V G GAGR++A+R+L+A G + I DVT + HNGC
Sbjct: 64 AAQMAAETAAKAAMEHGMKTVEVMVKGPGAGREAAIRSLQAAGLEVNLIKDVTPVPHNGC 123
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 124 RPPKRRRV 131
>gi|91216886|ref|ZP_01253850.1| 30S ribosomal protein S11 [Psychroflexus torquis ATCC 700755]
gi|91185047|gb|EAS71426.1| 30S ribosomal protein S11 [Psychroflexus torquis ATCC 700755]
Length = 127
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R+ G AH+ ++FNN +++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKSS--TKKRKVIVDAYGEAHISASFNNIIVSLTNKKGDVISWSSSGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ++ +D S A G+ ++V V G G GR+SA+R+L G + I DVT I HNG
Sbjct: 59 YAAQLSAEDASKVAHEAGLRKVKVYVKGPGNGRESAIRSLHNSGIEVTEIIDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|239905882|ref|YP_002952621.1| 30S ribosomal protein S11 [Desulfovibrio magneticus RS-1]
gi|259494621|sp|C4XLK1|RS11_DESMR RecName: Full=30S ribosomal protein S11
gi|239795746|dbj|BAH74735.1| 30S ribosomal protein S11 [Desulfovibrio magneticus RS-1]
Length = 128
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R +ERKNI G AH+ +TFNNT +T TD GN ++W++ GF GSRK++P
Sbjct: 1 MAK-PRRTGKKERKNIPVGVAHIQATFNNTIVTFTDQKGNVVSWATSGGAGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA ++ + KAQ +GM ++ V V G G+GR++A+RA+ GF I I D+T I HNG
Sbjct: 60 FAAQVAAENAARKAQENGMRTVGVLVKGPGSGREAAMRAIHNAGFKISYIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|148244352|ref|YP_001219046.1| 30S ribosomal protein S11 [Candidatus Vesicomyosocius okutanii HA]
gi|152060831|sp|A5CXI7|RS11_VESOH RecName: Full=30S ribosomal protein S11
gi|146326179|dbj|BAF61322.1| 30S ribosomal protein S11 [Candidatus Vesicomyosocius okutanii HA]
Length = 128
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 78/114 (68%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G AH+ +TFNNT + ITD HGNT+ W++ GF GSRK++PFAAQVA C KA
Sbjct: 15 ITDGIAHIHATFNNTIVMITDRHGNTVCWATSGGSGFRGSRKSTPFAAQVAAGSCGEKAL 74
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +LEV V G G GRDSA+R L A G I SI DVT I HNGCRP K+RR+
Sbjct: 75 AFGMKNLEVHVKGPGPGRDSAIRGLNAQGLKIQSITDVTPIPHNGCRPSKKRRV 128
>gi|150015070|ref|YP_001307324.1| 30S ribosomal protein S11 [Clostridium beijerinckii NCIMB 8052]
gi|189040408|sp|A6LPT8|RS11_CLOB8 RecName: Full=30S ribosomal protein S11
gi|149901535|gb|ABR32368.1| ribosomal protein S11 [Clostridium beijerinckii NCIMB 8052]
Length = 131
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NVEHGAAHIKSTFNNSIVTLTDAVGNALSWSSAGALGFRGSRKSTPFAAQMAAETAAKVA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 131
>gi|238752668|ref|ZP_04614139.1| 30S ribosomal protein S11 [Yersinia rohdei ATCC 43380]
gi|238754195|ref|ZP_04615553.1| 30S ribosomal protein S11 [Yersinia ruckeri ATCC 29473]
gi|260599617|ref|YP_003212188.1| 30S ribosomal protein S11 [Cronobacter turicensis z3032]
gi|238707691|gb|EEQ00051.1| 30S ribosomal protein S11 [Yersinia ruckeri ATCC 29473]
gi|238709095|gb|EEQ01342.1| 30S ribosomal protein S11 [Yersinia rohdei ATCC 43380]
gi|260218794|emb|CBA34142.1| 30S ribosomal protein S11 [Cronobacter turicensis z3032]
gi|304560336|gb|ADM43000.1| SSU ribosomal protein S11p (S14e) [Edwardsiella tarda FL6-60]
Length = 110
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 78/109 (71%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
AH+ ++FNNT +TITD GN + W++ GF GSRK++PFAAQVA + C+ + +G+
Sbjct: 2 AHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCAEAVKEYGIK 61
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+LEV V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 62 NLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 110
>gi|168187787|ref|ZP_02622422.1| ribosomal protein S11 [Clostridium botulinum C str. Eklund]
gi|169294363|gb|EDS76496.1| ribosomal protein S11 [Clostridium botulinum C str. Eklund]
Length = 131
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ +R R+++ NI G AH+ STFNN+ +TITD GN ++WSS +GF GSRK+
Sbjct: 1 MAKANARKTRRKKERKNIEHGCAHIKSTFNNSIVTITDAVGNALSWSSAGALGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + + A HG+ S+EV V G GAGR++A+R+L+A G I I DVT I H
Sbjct: 61 TPFAAQMAAETAANSAMEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEITLIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|90962381|ref|YP_536297.1| 30S ribosomal protein S11 [Lactobacillus salivarius UCC118]
gi|227891569|ref|ZP_04009374.1| 30S ribosomal protein S11 [Lactobacillus salivarius ATCC 11741]
gi|301300234|ref|ZP_07206446.1| 30S ribosomal protein S11 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122993042|sp|Q1WSB5|RS11_LACS1 RecName: Full=30S ribosomal protein S11
gi|90821575|gb|ABE00214.1| SSU ribosomal protein S11P [Lactobacillus salivarius UCC118]
gi|227866716|gb|EEJ74137.1| 30S ribosomal protein S11 [Lactobacillus salivarius ATCC 11741]
gi|300852175|gb|EFK79847.1| 30S ribosomal protein S11 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 128
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/115 (56%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++PFAAQ+A++ + A
Sbjct: 14 NIESGVAHIHSTFNNTLVMITDVHGNAVAWSSAGSLGFKGSRKSTPFAAQMASEAAAKGA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++EV V G G+GR++A+RAL+ G + SI DVT + HNGCRP KRRR+
Sbjct: 74 MEHGMKTVEVAVKGPGSGREAAIRALQTTGLEVTSIKDVTPVPHNGCRPPKRRRV 128
>gi|300812378|ref|ZP_07092813.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123134|ref|YP_004033393.1| 30S ribosomal protein s11 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|300496683|gb|EFK31770.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312279697|gb|ADQ60416.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684744|gb|EGD26898.1| 30S ribosomal protein S11 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 129
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MPAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G G+GR+SA+RAL+A G I SI DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAIDQGMKHIEVSVKGPGSGRESAIRALQAAGLEITSIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|237751464|ref|ZP_04581944.1| ribosomal protein S11 [Helicobacter bilis ATCC 43879]
gi|229372830|gb|EEO23221.1| ribosomal protein S11 [Helicobacter bilis ATCC 43879]
Length = 131
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRE-RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + ++ R +KNI G + ++FNNT +T+TD GN + W++ +GF GS+K++
Sbjct: 1 MAKKQTNVKKRVVKKNIARGIVCIAASFNNTNVTVTDEMGNVLCWATAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ AI G ++ I DVT + H
Sbjct: 61 PYAAQQAVESALSKAKEHGIKEVGIKVQGPGSGRETAVKSVGAIEGIKVLWIKDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|291334080|gb|ADD93753.1| ribosomal protein S11 putative [uncultured marine bacterium
MedDCM-OCT-S05-C114]
Length = 185
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 4 SPSRIRN-RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++R + KNI +G +V+TFNNT+++ +D GN ++WSS F GSRK++ +A
Sbjct: 59 EQVKVRKAKGSKNISTGICFIVATFNNTKVSFSDMKGNVVSWSSSGKCNFRGSRKSTAYA 118
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQV T D A +HGM + VKV G G GRDSA+RAL+++GFT+ +I DVT + HNGCR
Sbjct: 119 AQVVTQDAGKVAMSHGMKEVVVKVKGPGMGRDSAIRALQSLGFTVSTIIDVTPVPHNGCR 178
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 179 PPKRRRV 185
>gi|300775037|ref|ZP_07084900.1| 30S ribosomal protein S11 [Chryseobacterium gleum ATCC 35910]
gi|300506852|gb|EFK37987.1| 30S ribosomal protein S11 [Chryseobacterium gleum ATCC 35910]
Length = 129
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 86/129 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ R+ K G AH+ ++FNN I++T+ +G I+W+S +GF GS+KN+P
Sbjct: 1 MAKQTKVVKKRKVKVEAIGEAHIQASFNNIIISLTNKNGEVISWASAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A ++CSA A G+ ++V V G GAGR+SA+R++ G + I DVT + HNG
Sbjct: 61 FAAQMAAENCSAVAHEAGLRRVKVFVKGPGAGRESAIRSIHNSGIEVSEIIDVTPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|260589251|ref|ZP_05855164.1| 30S ribosomal protein S11 [Blautia hansenii DSM 20583]
gi|331082659|ref|ZP_08331782.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540332|gb|EEX20901.1| 30S ribosomal protein S11 [Blautia hansenii DSM 20583]
gi|330400278|gb|EGG79920.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 130
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 16 NVERGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFKGSRKSTPYAAQMAAETAAKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 76 VIHGLKTVDVFVKGPGSGREAAIRALAACGIEVTSIKDVTPVPHNGCRPPKRRRV 130
>gi|118616623|ref|YP_904955.1| 30S ribosomal protein S11 [Mycobacterium ulcerans Agy99]
gi|183981108|ref|YP_001849399.1| 30S ribosomal protein S11, RpsK [Mycobacterium marinum M]
gi|152060798|sp|A0PMB5|RS11_MYCUA RecName: Full=30S ribosomal protein S11
gi|226708390|sp|B2HCX2|RS11_MYCMM RecName: Full=30S ribosomal protein S11
gi|118568733|gb|ABL03484.1| 30S ribosomal protein S11, RpsK [Mycobacterium ulcerans Agy99]
gi|183174434|gb|ACC39544.1| 30S ribosomal protein S11, RpsK [Mycobacterium marinum M]
Length = 138
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 69/128 (53%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK + R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PF
Sbjct: 11 PKKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPF 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG
Sbjct: 71 AAQLAAENAARKAQEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGV 130
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 131 RPPKRRRV 138
>gi|42518454|ref|NP_964384.1| 30S ribosomal protein S11 [Lactobacillus johnsonii NCC 533]
gi|116628987|ref|YP_814159.1| 30S ribosomal protein S11 [Lactobacillus gasseri ATCC 33323]
gi|227888828|ref|ZP_04006633.1| ribosomal protein S11 [Lactobacillus johnsonii ATCC 33200]
gi|238853458|ref|ZP_04643836.1| 30S ribosomal protein S11 [Lactobacillus gasseri 202-4]
gi|268318876|ref|YP_003292532.1| ribosomal protein S11 [Lactobacillus johnsonii FI9785]
gi|282852674|ref|ZP_06262016.1| 30S ribosomal protein S11 [Lactobacillus gasseri 224-1]
gi|311111215|ref|ZP_07712612.1| 30S ribosomal protein S11 [Lactobacillus gasseri MV-22]
gi|62287450|sp|Q74L65|RS11_LACJO RecName: Full=30S ribosomal protein S11
gi|122274015|sp|Q046A1|RS11_LACGA RecName: Full=30S ribosomal protein S11
gi|41582739|gb|AAS08350.1| 30S ribosomal protein S11 [Lactobacillus johnsonii NCC 533]
gi|116094569|gb|ABJ59721.1| SSU ribosomal protein S11P [Lactobacillus gasseri ATCC 33323]
gi|227850665|gb|EEJ60751.1| ribosomal protein S11 [Lactobacillus johnsonii ATCC 33200]
gi|238833898|gb|EEQ26157.1| 30S ribosomal protein S11 [Lactobacillus gasseri 202-4]
gi|262397251|emb|CAX66265.1| ribosomal protein S11 [Lactobacillus johnsonii FI9785]
gi|282556416|gb|EFB62036.1| 30S ribosomal protein S11 [Lactobacillus gasseri 224-1]
gi|311066369|gb|EFQ46709.1| 30S ribosomal protein S11 [Lactobacillus gasseri MV-22]
gi|329666717|gb|AEB92665.1| 30S ribosomal protein S11 [Lactobacillus johnsonii DPC 6026]
Length = 129
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR++A+RAL+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAMDQGMKHVEVSVKGPGAGREAAIRALQAAGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|317968838|ref|ZP_07970228.1| 30S ribosomal protein S11 [Synechococcus sp. CB0205]
Length = 130
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKSGSKKTKRNVPNGVAHIQSTFNNTIVSITDTAGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|114778799|ref|ZP_01453606.1| 30S ribosomal protein S11 [Mariprofundus ferrooxydans PV-1]
gi|114550930|gb|EAU53494.1| 30S ribosomal protein S11 [Mariprofundus ferrooxydans PV-1]
Length = 129
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + R RKNI + H+ ++FNNT IT TD +G+ I W++ GF GSRK++P
Sbjct: 1 MAKPKASAKKRVRKNIANAVVHIKASFNNTLITFTDGNGDAICWATSGASGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA ++ + KA +HG+ + V V G G+GR+SALRA+ A+G + +I DVT I HNG
Sbjct: 61 FAAQVAAEEAARKAMDHGVKNCSVLVRGPGSGRESALRAIAAVGINVTTIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|303247016|ref|ZP_07333292.1| 30S ribosomal protein S11 [Desulfovibrio fructosovorans JJ]
gi|302491723|gb|EFL51606.1| 30S ribosomal protein S11 [Desulfovibrio fructosovorans JJ]
Length = 128
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P RI +ERKNI G AH+ ++FNNT +T TD GN ++W++ GF GSRK++P
Sbjct: 1 MAK-PRRIGKKERKNIPVGVAHIQASFNNTIVTFTDQKGNVVSWATSGGAGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA ++ + KAQ +GM ++ + V G G+GR++A+RA+ GF + I D+T I HNG
Sbjct: 60 FAAQVAAENAARKAQENGMRTVGILVKGPGSGREAAMRAIHNAGFKVSYIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|117927541|ref|YP_872092.1| 30S ribosomal protein S11 [Acidothermus cellulolyticus 11B]
gi|152060566|sp|A0LRP6|RS11_ACIC1 RecName: Full=30S ribosomal protein S11
gi|117648004|gb|ABK52106.1| SSU ribosomal protein S11P [Acidothermus cellulolyticus 11B]
Length = 135
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/125 (52%), Positives = 92/125 (73%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KN+ G AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PFAAQ
Sbjct: 11 AKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGAVIAWASAGQVGFKGSRKSTPFAAQ 70
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+ + + +AQ HGM ++V V G G+GR++A+R+L+A+G + SI DVT + HNGCRP
Sbjct: 71 MTAEAAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQAVGLEVGSIQDVTPVPHNGCRPP 130
Query: 125 KRRRI 129
KRRR+
Sbjct: 131 KRRRV 135
>gi|134096298|ref|YP_001101373.1| 30S ribosomal protein S11 [Herminiimonas arsenicoxydans]
gi|166231815|sp|A4G9R5|RS11_HERAR RecName: Full=30S ribosomal protein S11
gi|133740201|emb|CAL63252.1| 30S ribosomal subunit protein S11 [Herminiimonas arsenicoxydans]
Length = 134
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
R+R + +KN+ G AH+ ++FNNT ITITD GN ++W++ GF GSRK++PFAAQVA
Sbjct: 12 RVRKKVKKNVAEGIAHIHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTPFAAQVA 71
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A G+ +LEV++ G G GR+S++RAL +G I I DVT + HNGCRP KR
Sbjct: 72 AEAAGKVAIECGIKNLEVRIKGPGPGRESSVRALNNLGIKITQIQDVTPVPHNGCRPPKR 131
Query: 127 RRI 129
RRI
Sbjct: 132 RRI 134
>gi|313830103|gb|EFS67817.1| 30S ribosomal protein S11 [Propionibacterium acnes HL007PA1]
Length = 135
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+++R +E+KN+V+G+AH+ STFNNT I ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 10 PKTKVRRKEKKNVVAGQAHIKSTFNNTIIAITDPSGAVISWASAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + +A HGM ++V V G G+GR++A+R+L A+G I I DVT + HNGCRP
Sbjct: 70 QMAAEAAGRRAMEHGMKRVDVFVKGSGSGRETAIRSLGAVGLEIGPISDVTPVPHNGCRP 129
Query: 124 RKRRRI 129
KRRR+
Sbjct: 130 PKRRRV 135
>gi|253681894|ref|ZP_04862691.1| 30S ribosomal protein S11 [Clostridium botulinum D str. 1873]
gi|331268440|ref|YP_004394932.1| 30S ribosomal protein S11 [Clostridium botulinum BKT015925]
gi|253561606|gb|EES91058.1| 30S ribosomal protein S11 [Clostridium botulinum D str. 1873]
gi|329124990|gb|AEB74935.1| ribosomal protein S11 [Clostridium botulinum BKT015925]
Length = 131
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/115 (55%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNN+ +TITD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NIEHGCAHIKSTFNNSIVTITDAVGNALSWSSAGALGFKGSRKSTPFAAQMAAETAATSA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G I I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEITLIKDVTPIPHNGCRPPKRRRV 131
>gi|254431848|ref|ZP_05045551.1| ribosomal protein S11 [Cyanobium sp. PCC 7001]
gi|197626301|gb|EDY38860.1| ribosomal protein S11 [Cyanobium sp. PCC 7001]
Length = 130
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKTGPKKAKRNVPNGVAHIQSTFNNTIVSITDTAGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|15900171|ref|NP_344775.1| 30S ribosomal protein S11 [Streptococcus pneumoniae TIGR4]
gi|15902258|ref|NP_357808.1| 30S ribosomal protein S11 [Streptococcus pneumoniae R6]
gi|111658777|ref|ZP_01409408.1| hypothetical protein SpneT_02000074 [Streptococcus pneumoniae
TIGR4]
gi|116515441|ref|YP_815736.1| 30S ribosomal protein S11 [Streptococcus pneumoniae D39]
gi|125717011|ref|YP_001034144.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK36]
gi|148983634|ref|ZP_01816953.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
gi|148987972|ref|ZP_01819435.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
gi|148992812|ref|ZP_01822455.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
gi|148996657|ref|ZP_01824375.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
gi|149001658|ref|ZP_01826631.1| DNA-directed RNA polymerase subunit alpha [Streptococcus pneumoniae
SP14-BS69]
gi|149005986|ref|ZP_01829715.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
gi|149011105|ref|ZP_01832410.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
gi|149017925|ref|ZP_01834384.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
gi|157150189|ref|YP_001451210.1| 30S ribosomal protein S11 [Streptococcus gordonii str. Challis
substr. CH1]
gi|168483872|ref|ZP_02708824.1| ribosomal protein S11 [Streptococcus pneumoniae CDC1873-00]
gi|168485998|ref|ZP_02710506.1| ribosomal protein S11 [Streptococcus pneumoniae CDC1087-00]
gi|168489712|ref|ZP_02713911.1| ribosomal protein S11 [Streptococcus pneumoniae SP195]
gi|168492189|ref|ZP_02716332.1| ribosomal protein S11 [Streptococcus pneumoniae CDC0288-04]
gi|168493929|ref|ZP_02718072.1| ribosomal protein S11 [Streptococcus pneumoniae CDC3059-06]
gi|168576338|ref|ZP_02722221.1| ribosomal protein S11 [Streptococcus pneumoniae MLV-016]
gi|169832451|ref|YP_001693766.1| 30S ribosomal protein S11 [Streptococcus pneumoniae Hungary19A-6]
gi|182683212|ref|YP_001834959.1| 30S ribosomal protein S11 [Streptococcus pneumoniae CGSP14]
gi|194398129|ref|YP_002036934.1| 30S ribosomal protein S11 [Streptococcus pneumoniae G54]
gi|221231137|ref|YP_002510289.1| 30S ribosomal protein S11 [Streptococcus pneumoniae ATCC 700669]
gi|225853840|ref|YP_002735352.1| 30S ribosomal protein S11 [Streptococcus pneumoniae JJA]
gi|225855999|ref|YP_002737510.1| 30S ribosomal protein S11 [Streptococcus pneumoniae P1031]
gi|225858088|ref|YP_002739598.1| 30S ribosomal protein S11 [Streptococcus pneumoniae 70585]
gi|225860276|ref|YP_002741785.1| 30S ribosomal protein S11 [Streptococcus pneumoniae Taiwan19F-14]
gi|237649698|ref|ZP_04523950.1| 30S ribosomal protein S11 [Streptococcus pneumoniae CCRI 1974]
gi|237821396|ref|ZP_04597241.1| 30S ribosomal protein S11 [Streptococcus pneumoniae CCRI 1974M2]
gi|262283557|ref|ZP_06061322.1| ribosomal protein S11 [Streptococcus sp. 2_1_36FAA]
gi|270292025|ref|ZP_06198240.1| ribosomal protein S11 [Streptococcus sp. M143]
gi|289168707|ref|YP_003446976.1| 30S ribosomal protein S11 [Streptococcus mitis B6]
gi|298230391|ref|ZP_06964072.1| 30S ribosomal protein S11 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298256012|ref|ZP_06979598.1| 30S ribosomal protein S11 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|303255070|ref|ZP_07341146.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS455]
gi|303259286|ref|ZP_07345264.1| 30S ribosomal protein S11 [Streptococcus pneumoniae SP-BS293]
gi|303261041|ref|ZP_07346990.1| 30S ribosomal protein S11 [Streptococcus pneumoniae SP14-BS292]
gi|303263369|ref|ZP_07349292.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS397]
gi|303265534|ref|ZP_07351434.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS457]
gi|303267908|ref|ZP_07353710.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS458]
gi|306825962|ref|ZP_07459298.1| 30S ribosomal protein S11 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306828807|ref|ZP_07461999.1| 30S ribosomal protein S11 [Streptococcus mitis ATCC 6249]
gi|307066912|ref|YP_003875878.1| hypothetical protein SPAP_0283 [Streptococcus pneumoniae AP200]
gi|307126453|ref|YP_003878484.1| 30S ribosomal protein S11 [Streptococcus pneumoniae 670-6B]
gi|307702710|ref|ZP_07639662.1| 30S ribosomal protein S11 [Streptococcus oralis ATCC 35037]
gi|307704089|ref|ZP_07641018.1| 30S ribosomal protein S11 [Streptococcus mitis SK597]
gi|307708084|ref|ZP_07644552.1| ribosomal protein S11 [Streptococcus mitis NCTC 12261]
gi|307709935|ref|ZP_07646382.1| 30S ribosomal protein S11 [Streptococcus mitis SK564]
gi|307711031|ref|ZP_07647453.1| 30S ribosomal protein S11 [Streptococcus mitis SK321]
gi|309799083|ref|ZP_07693336.1| ribosomal protein S11 [Streptococcus infantis SK1302]
gi|315222794|ref|ZP_07864680.1| 30S ribosomal protein S11 [Streptococcus anginosus F0211]
gi|315612356|ref|ZP_07887269.1| 30S ribosomal protein S11 [Streptococcus sanguinis ATCC 49296]
gi|319940036|ref|ZP_08014390.1| 30S ribosomal protein S11 [Streptococcus anginosus 1_2_62CV]
gi|319945811|ref|ZP_08020061.1| 30S ribosomal protein S11 [Streptococcus australis ATCC 700641]
gi|322375015|ref|ZP_08049529.1| 30S ribosomal protein S11 [Streptococcus sp. C300]
gi|322377206|ref|ZP_08051698.1| 30S ribosomal protein S11 [Streptococcus sp. M334]
gi|322386329|ref|ZP_08059959.1| 30S ribosomal protein S11 [Streptococcus cristatus ATCC 51100]
gi|322388377|ref|ZP_08061980.1| 30S ribosomal protein S11 [Streptococcus infantis ATCC 700779]
gi|322391223|ref|ZP_08064695.1| 30S ribosomal protein S11 [Streptococcus peroris ATCC 700780]
gi|323350964|ref|ZP_08086622.1| 30S ribosomal protein S11 [Streptococcus sanguinis VMC66]
gi|331267110|ref|YP_004326740.1| 30S ribosomal protein S11 [Streptococcus oralis Uo5]
gi|54039335|sp|P66360|RS11_STRR6 RecName: Full=30S ribosomal protein S11
gi|54042111|sp|P66359|RS11_STRPN RecName: Full=30S ribosomal protein S11
gi|122279378|sp|Q04ML2|RS11_STRP2 RecName: Full=30S ribosomal protein S11
gi|152060826|sp|A3CK89|RS11_STRSV RecName: Full=30S ribosomal protein S11
gi|172045616|sp|A8AZK0|RS11_STRGC RecName: Full=30S ribosomal protein S11
gi|226708422|sp|B5E6H9|RS11_STRP4 RecName: Full=30S ribosomal protein S11
gi|226708423|sp|B1I8M3|RS11_STRPI RecName: Full=30S ribosomal protein S11
gi|226708424|sp|B2IS66|RS11_STRPS RecName: Full=30S ribosomal protein S11
gi|254811045|sp|C1CAN7|RS11_STRP7 RecName: Full=30S ribosomal protein S11
gi|254811046|sp|B8ZKQ4|RS11_STRPJ RecName: Full=30S ribosomal protein S11
gi|254811048|sp|C1CC31|RS11_STRZJ RecName: Full=30S ribosomal protein S11
gi|254811049|sp|C1CIC2|RS11_STRZP RecName: Full=30S ribosomal protein S11
gi|254811050|sp|C1CPB3|RS11_STRZT RecName: Full=30S ribosomal protein S11
gi|14971704|gb|AAK74415.1| ribosomal protein S11 [Streptococcus pneumoniae TIGR4]
gi|15457759|gb|AAK99018.1| 30S Ribosomal protein S11 [Streptococcus pneumoniae R6]
gi|116076017|gb|ABJ53737.1| ribosomal protein S11 [Streptococcus pneumoniae D39]
gi|125496928|gb|ABN43594.1| 30S ribosomal protein S11, putative [Streptococcus sanguinis SK36]
gi|147757232|gb|EDK64271.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
gi|147760116|gb|EDK67105.1| DNA-directed RNA polymerase subunit alpha [Streptococcus pneumoniae
SP14-BS69]
gi|147762342|gb|EDK69303.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
gi|147764741|gb|EDK71671.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
gi|147923781|gb|EDK74893.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
gi|147926436|gb|EDK77509.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
gi|147928538|gb|EDK79553.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
gi|147931489|gb|EDK82467.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
gi|157074983|gb|ABV09666.1| ribosomal protein S11 [Streptococcus gordonii str. Challis substr.
CH1]
gi|168994953|gb|ACA35565.1| ribosomal protein S11 [Streptococcus pneumoniae Hungary19A-6]
gi|172042858|gb|EDT50904.1| ribosomal protein S11 [Streptococcus pneumoniae CDC1873-00]
gi|182628546|gb|ACB89494.1| 30S ribosomal protein S11 [Streptococcus pneumoniae CGSP14]
gi|183570842|gb|EDT91370.1| ribosomal protein S11 [Streptococcus pneumoniae CDC1087-00]
gi|183571777|gb|EDT92305.1| ribosomal protein S11 [Streptococcus pneumoniae SP195]
gi|183573646|gb|EDT94174.1| ribosomal protein S11 [Streptococcus pneumoniae CDC0288-04]
gi|183576138|gb|EDT96666.1| ribosomal protein S11 [Streptococcus pneumoniae CDC3059-06]
gi|183577864|gb|EDT98392.1| ribosomal protein S11 [Streptococcus pneumoniae MLV-016]
gi|194357796|gb|ACF56244.1| 30S ribosomal protein S11 [Streptococcus pneumoniae G54]
gi|220673597|emb|CAR68083.1| 30S ribosomal protein S11 [Streptococcus pneumoniae ATCC 700669]
gi|225720663|gb|ACO16517.1| ribosomal protein S11 [Streptococcus pneumoniae 70585]
gi|225724015|gb|ACO19868.1| ribosomal protein S11 [Streptococcus pneumoniae JJA]
gi|225724492|gb|ACO20344.1| ribosomal protein S11 [Streptococcus pneumoniae P1031]
gi|225728173|gb|ACO24024.1| ribosomal protein S11 [Streptococcus pneumoniae Taiwan19F-14]
gi|262260614|gb|EEY79315.1| ribosomal protein S11 [Streptococcus sp. 2_1_36FAA]
gi|270279553|gb|EFA25395.1| ribosomal protein S11 [Streptococcus sp. M143]
gi|288908274|emb|CBJ23116.1| 30S ribosomal protein S11 [Streptococcus mitis B6]
gi|301793506|emb|CBW35879.1| 30S ribosomal protein S11 [Streptococcus pneumoniae INV104]
gi|301799382|emb|CBW31917.1| 30S ribosomal protein S11 [Streptococcus pneumoniae OXC141]
gi|301801177|emb|CBW33850.1| 30S ribosomal protein S11 [Streptococcus pneumoniae INV200]
gi|302597900|gb|EFL64970.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS455]
gi|302637878|gb|EFL68364.1| 30S ribosomal protein S11 [Streptococcus pneumoniae SP14-BS292]
gi|302639704|gb|EFL70161.1| 30S ribosomal protein S11 [Streptococcus pneumoniae SP-BS293]
gi|302642604|gb|EFL72949.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS458]
gi|302644974|gb|EFL75221.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS457]
gi|302647142|gb|EFL77366.1| 30S ribosomal protein S11 [Streptococcus pneumoniae BS397]
gi|304428985|gb|EFM32073.1| 30S ribosomal protein S11 [Streptococcus mitis ATCC 6249]
gi|304431678|gb|EFM34658.1| 30S ribosomal protein S11 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306408449|gb|ADM83876.1| hypothetical protein SPAP_0283 [Streptococcus pneumoniae AP200]
gi|306483515|gb|ADM90384.1| ribosomal protein S11 [Streptococcus pneumoniae 670-6B]
gi|307615869|gb|EFN95074.1| ribosomal protein S11 [Streptococcus mitis NCTC 12261]
gi|307616993|gb|EFN96171.1| 30S ribosomal protein S11 [Streptococcus mitis SK321]
gi|307619306|gb|EFN98435.1| 30S ribosomal protein S11 [Streptococcus mitis SK564]
gi|307622379|gb|EFO01387.1| 30S ribosomal protein S11 [Streptococcus mitis SK597]
gi|307623826|gb|EFO02811.1| 30S ribosomal protein S11 [Streptococcus oralis ATCC 35037]
gi|308117318|gb|EFO54741.1| ribosomal protein S11 [Streptococcus infantis SK1302]
gi|315188097|gb|EFU21826.1| 30S ribosomal protein S11 [Streptococcus anginosus F0211]
gi|315315337|gb|EFU63376.1| 30S ribosomal protein S11 [Streptococcus sanguinis ATCC 49296]
gi|319747876|gb|EFW00120.1| 30S ribosomal protein S11 [Streptococcus australis ATCC 700641]
gi|319810750|gb|EFW07077.1| 30S ribosomal protein S11 [Streptococcus anginosus 1_2_62CV]
gi|321140690|gb|EFX36192.1| 30S ribosomal protein S11 [Streptococcus infantis ATCC 700779]
gi|321145976|gb|EFX41365.1| 30S ribosomal protein S11 [Streptococcus peroris ATCC 700780]
gi|321269553|gb|EFX52483.1| 30S ribosomal protein S11 [Streptococcus cristatus ATCC 51100]
gi|321280515|gb|EFX57554.1| 30S ribosomal protein S11 [Streptococcus sp. C300]
gi|321281919|gb|EFX58927.1| 30S ribosomal protein S11 [Streptococcus sp. M334]
gi|322122946|gb|EFX94652.1| 30S ribosomal protein S11 [Streptococcus sanguinis VMC66]
gi|324989978|gb|EGC21919.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK353]
gi|324991839|gb|EGC23764.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK405]
gi|324996271|gb|EGC28179.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK678]
gi|325686429|gb|EGD28459.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK72]
gi|325689207|gb|EGD31213.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK115]
gi|325695786|gb|EGD37683.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK150]
gi|325698000|gb|EGD39883.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK160]
gi|326683782|emb|CBZ01400.1| 30S ribosomal protein S11 [Streptococcus oralis Uo5]
gi|327390652|gb|EGE88992.1| 30S ribosomal protein S11 [Streptococcus pneumoniae GA04375]
gi|327458455|gb|EGF04811.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK1]
gi|327463698|gb|EGF10014.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK1057]
gi|327467359|gb|EGF12859.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK330]
gi|327471718|gb|EGF17159.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK408]
gi|327490439|gb|EGF22221.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK1058]
gi|328945193|gb|EGG39347.1| 30S ribosomal protein S11 [Streptococcus sanguinis SK1087]
gi|332075899|gb|EGI86366.1| 30S ribosomal protein S11 [Streptococcus pneumoniae GA17570]
gi|332076679|gb|EGI87141.1| 30S ribosomal protein S11 [Streptococcus pneumoniae GA17545]
gi|332077535|gb|EGI87996.1| 30S ribosomal protein S11 [Streptococcus pneumoniae GA41301]
Length = 127
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ S+EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKSAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|309789645|ref|ZP_07684226.1| ribosomal protein S11 [Oscillochloris trichoides DG6]
gi|308228381|gb|EFO82028.1| ribosomal protein S11 [Oscillochloris trichoides DG6]
Length = 107
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/105 (55%), Positives = 76/105 (72%)
Query: 25 STFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEV 84
STFNNT +TITDP G + W+S GF GSRK++P+AAQ+ D + KA +GM S+EV
Sbjct: 3 STFNNTIVTITDPSGAVVCWASAGQGGFKGSRKSTPYAAQITADSAARKAMENGMRSIEV 62
Query: 85 KVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
V G G+GR++A+R+L+A G + SI DVT I HNGCRP KRRR+
Sbjct: 63 FVKGPGSGREAAIRSLQAAGLQVTSITDVTPIPHNGCRPPKRRRV 107
>gi|225849519|ref|YP_002729684.1| 30S ribosomal protein S11 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643466|gb|ACN98516.1| 30S ribosomal protein S11 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 130
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + ++ + SG AH+ STFNNT +TITD GNT++W+S VGF G+RKN+P
Sbjct: 1 MAKKRKSTTKKVKRTVTSGIAHIQSTFNNTIVTITDKEGNTLSWASGGTVGFKGTRKNTP 60
Query: 61 FAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ+A + KA +G+ +EV V G GAGR+ A+R L A G TI +I DVT I HN
Sbjct: 61 YAAQLAAQKAAKKAMDEYGLKEVEVWVKGPGAGREPAIRTLAASGLTITAIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP +RR+
Sbjct: 121 GCRPPSKRRV 130
>gi|110598111|ref|ZP_01386389.1| Ribosomal protein S11 [Chlorobium ferrooxidans DSM 13031]
gi|110340243|gb|EAT58740.1| Ribosomal protein S11 [Chlorobium ferrooxidans DSM 13031]
Length = 127
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 82/121 (67%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ ++ K G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+Q+ ++
Sbjct: 7 KKKKVKVTPEGAVHIKASFNNIMVTITDLQGNTVSWSSAGKNGFKGSKKNTPYASQITSE 66
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A + GM + V + G GAGRD+A+RAL+ G + +I D+T + HNGCRP KRRR
Sbjct: 67 AAAKEAYDLGMRHVNVFIKGPGAGRDAAIRALQGAGLDVRTIKDITPLPHNGCRPPKRRR 126
Query: 129 I 129
+
Sbjct: 127 V 127
>gi|291542057|emb|CBL15167.1| SSU ribosomal protein S11P [Ruminococcus bromii L2-63]
Length = 133
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 2 PKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
PK ++ R RERK+I G AH+ STFNNT +TI+D GN ++W+S +GF GS+K++
Sbjct: 4 PKGGKKVIRRRRERKHIEKGAAHIQSTFNNTIVTISDTQGNAVSWASAGELGFRGSKKST 63
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A HGM +EV V G G GR++A+RAL+ G + I DVT I HN
Sbjct: 64 PFAAQSAAETAAKAAMEHGMKYVEVYVKGPGQGREAAIRALQTAGLEVTMIKDVTPIPHN 123
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 124 GCRPPKRRRV 133
>gi|291166853|gb|EFE28899.1| 30S ribosomal protein S11 [Filifactor alocis ATCC 35896]
Length = 133
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 93/127 (73%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K +R+R RERKNI G AH+ S+FNN+ +T++D HGN I+W+S +GF GSRK++PFA
Sbjct: 7 KKNARVRRRERKNIEKGHAHIQSSFNNSIVTLSDVHGNVISWASAGQLGFKGSRKSTPFA 66
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A HG+ S+EV V G G+GR++A+RAL+A G + I DVT I HNGCR
Sbjct: 67 AQMAAETAAKAAMEHGLRSVEVFVKGPGSGREAAIRALQASGLEVTMIKDVTPIPHNGCR 126
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 127 PPKRRRV 133
>gi|113953823|ref|YP_729645.1| 30S ribosomal protein S11 [Synechococcus sp. CC9311]
gi|123031878|sp|Q0ID27|RS11_SYNS3 RecName: Full=30S ribosomal protein S11
gi|113881174|gb|ABI46132.1| ribosomal protein S11 [Synechococcus sp. CC9311]
Length = 130
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTTGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|229917332|ref|YP_002885978.1| ribosomal protein S11 [Exiguobacterium sp. AT1b]
gi|259494624|sp|C4KZM0|RS11_EXISA RecName: Full=30S ribosomal protein S11
gi|229468761|gb|ACQ70533.1| ribosomal protein S11 [Exiguobacterium sp. AT1b]
Length = 131
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/127 (49%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K R + + +K++ G H+ STFNNT ITITD GN I+W++ +GF GSRK++PFA
Sbjct: 5 KQNVRSKRKVKKHVEVGVVHIRSTFNNTIITITDTQGNAISWATSGNLGFKGSRKSTPFA 64
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A ++GM ++EV V G GAGR++A+RAL+A G + +I DVT + HNGCR
Sbjct: 65 AQMAAETAAKVAMDNGMRTVEVNVKGPGAGREAAIRALQATGLEVTAIRDVTPVPHNGCR 124
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 125 PPKRRRV 131
>gi|332170583|gb|AEE19838.1| 30S ribosomal protein S11 [Krokinobacter diaphorus 4H-3-7-5]
Length = 127
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ R +++ G AH+ ++FNN +++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKQTAKKRKVVIESV--GEAHITASFNNIIVSLTNKKGDVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A +DCS A G+ ++V V G G GR+SA+RA+ G + I D+T + HNG
Sbjct: 59 YAAQTAAEDCSKVAHEAGLRKVKVYVKGPGNGRESAIRAVHNSGIEVTEIIDITPMPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|315652328|ref|ZP_07905320.1| 30S ribosomal protein S11 [Eubacterium saburreum DSM 3986]
gi|331004147|ref|ZP_08327627.1| 30S ribosomal protein S11 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|315485451|gb|EFU75841.1| 30S ribosomal protein S11 [Eubacterium saburreum DSM 3986]
gi|330411557|gb|EGG90967.1| 30S ribosomal protein S11 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 132
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRIRNRERK---NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ S + +++ N+ G+AH+ S+FNNT +T+TD GN I+W+S +GF GS+K
Sbjct: 1 MAKNASTKKVTKKRVKKNVERGQAHIQSSFNNTIVTLTDTQGNAISWASAGGLGFRGSKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++P+AA +A + + A HG+ ++V V G G+GR++A+RAL A G + SI DVT +
Sbjct: 61 STPYAASMAAETAAKAALVHGLKYVDVMVKGPGSGREAAIRALAACGIEVTSIKDVTPVP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|45644719|gb|AAS73107.1| predicted ribosomal protein S11 [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 125
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/112 (56%), Positives = 79/112 (70%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ S+FNNT +TITD GNTI W++ GF GSRK++PFAAQ+A D A+
Sbjct: 14 DGVAHIHSSFNNTIVTITDKQGNTICWATSGGSGFKGSRKSTPFAAQIAADKAGNAAKEF 73
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +L+VKV G G GR+SA+RAL A G I SI DVT + HNGCRP K+RR+
Sbjct: 74 GMVNLDVKVKGPGGGRESAIRALNACGLKIKSITDVTPLPHNGCRPSKKRRV 125
>gi|296131862|ref|YP_003639109.1| 30S ribosomal protein S11 [Thermincola sp. JR]
gi|296030440|gb|ADG81208.1| 30S ribosomal protein S11 [Thermincola potens JR]
Length = 128
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + +ERKN+ G AH+ STFNNT +TI+D GN I+W+S V+GF GSRK++P
Sbjct: 1 MARRV-RGKRKERKNVEQGIAHIKSTFNNTIVTISDRAGNAISWASAGVMGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +A +HGM +EV V G GAGR++A+RA++A G + I DVT I HNG
Sbjct: 60 FAAQMAAEKAAKEAMDHGMKEVEVYVKGPGAGREAAIRAIQAAGIEVNVIKDVTPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|254780238|ref|YP_003064651.1| 30S ribosomal protein S11 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039915|gb|ACT56711.1| 30S ribosomal protein S11 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 129
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP
Sbjct: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG
Sbjct: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
Query: 121 CRPRKRRRI 129
CRPRKRRRI
Sbjct: 121 CRPRKRRRI 129
>gi|78185544|ref|YP_377978.1| 30S ribosomal protein S11 [Synechococcus sp. CC9902]
gi|123729920|sp|Q3AW71|RS11_SYNS9 RecName: Full=30S ribosomal protein S11
gi|78169838|gb|ABB26935.1| SSU ribosomal protein S11P [Synechococcus sp. CC9902]
Length = 130
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + ++N+ +G AH+ STFNNT ++I+D G IAWSS GF G+RK +
Sbjct: 1 MAKTAKKSGPKKAKRNVPNGVAHIQSTFNNTIVSISDTAGEIIAWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|307244782|ref|ZP_07526883.1| 30S ribosomal protein S11 [Peptostreptococcus stomatis DSM 17678]
gi|306491880|gb|EFM63932.1| 30S ribosomal protein S11 [Peptostreptococcus stomatis DSM 17678]
Length = 133
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNNT +T+TD HGN I+W+S +GF GSRK +P+A+Q+A + + A
Sbjct: 19 NIERGHAHIQSTFNNTIVTLTDVHGNAISWASSGQLGFKGSRKATPYASQMAAETAAKAA 78
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 79 MEHGLKTVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCRPPKRRRV 133
>gi|33241139|ref|NP_876081.1| 30S ribosomal protein S11 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|59798851|sp|Q7V9Y4|RS11_PROMA RecName: Full=30S ribosomal protein S11
gi|33238669|gb|AAQ00734.1| Ribosomal protein S11 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 130
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + ++N+ +G H+ STFNNT ++ITD +G I+WSS GF G+RK +
Sbjct: 1 MATPAKKTGSKKSKRNVPNGVVHIQSTFNNTIVSITDTNGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRAKRRRV 130
>gi|55821880|ref|YP_140322.1| 30S ribosomal protein S11 [Streptococcus thermophilus LMG 18311]
gi|55823796|ref|YP_142237.1| 30S ribosomal protein S11 [Streptococcus thermophilus CNRZ1066]
gi|116628573|ref|YP_821192.1| 30S ribosomal protein S11 [Streptococcus thermophilus LMD-9]
gi|312862476|ref|ZP_07722719.1| 30S ribosomal protein S11 [Streptococcus vestibularis F0396]
gi|322374070|ref|ZP_08048604.1| 30S ribosomal protein S11 [Streptococcus sp. C150]
gi|322515892|ref|ZP_08068834.1| 30S ribosomal protein S11 [Streptococcus vestibularis ATCC 49124]
gi|81558874|sp|Q5LXT6|RS11_STRT1 RecName: Full=30S ribosomal protein S11
gi|81560061|sp|Q5M2D8|RS11_STRT2 RecName: Full=30S ribosomal protein S11
gi|122266833|sp|Q03IH6|RS11_STRTD RecName: Full=30S ribosomal protein S11
gi|55737865|gb|AAV61507.1| 30S ribosomal protein S11 [Streptococcus thermophilus LMG 18311]
gi|55739781|gb|AAV63422.1| 30S ribosomal protein S11 [Streptococcus thermophilus CNRZ1066]
gi|116101850|gb|ABJ66996.1| SSU ribosomal protein S11P [Streptococcus thermophilus LMD-9]
gi|311102119|gb|EFQ60319.1| 30S ribosomal protein S11 [Streptococcus vestibularis F0396]
gi|312279234|gb|ADQ63891.1| 30S ribosomal protein S11 [Streptococcus thermophilus ND03]
gi|321277036|gb|EFX54107.1| 30S ribosomal protein S11 [Streptococcus sp. C150]
gi|322125679|gb|EFX97006.1| 30S ribosomal protein S11 [Streptococcus vestibularis ATCC 49124]
Length = 127
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAVAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|197364266|ref|YP_002143903.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|207858659|ref|YP_002245310.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238758783|ref|ZP_04619957.1| 30S ribosomal protein S11 [Yersinia aldovae ATCC 35236]
gi|238763711|ref|ZP_04624670.1| 30S ribosomal protein S11 [Yersinia kristensenii ATCC 33638]
gi|238792958|ref|ZP_04636588.1| 30S ribosomal protein S11 [Yersinia intermedia ATCC 29909]
gi|289824202|ref|ZP_06543797.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|197095743|emb|CAR61313.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|206710462|emb|CAR34820.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238698013|gb|EEP90771.1| 30S ribosomal protein S11 [Yersinia kristensenii ATCC 33638]
gi|238703080|gb|EEP95623.1| 30S ribosomal protein S11 [Yersinia aldovae ATCC 35236]
gi|238727812|gb|EEQ19336.1| 30S ribosomal protein S11 [Yersinia intermedia ATCC 29909]
gi|261248574|emb|CBG26412.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301159960|emb|CBW19479.1| 30S ribosomal subunit protein S11 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|332086256|gb|EGI91412.1| 30S ribosomal protein S11 [Shigella dysenteriae 155-74]
Length = 110
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 78/109 (71%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
AH+ ++FNNT +TITD GN + W++ GF GSRK++PFAAQVA + C+ + +G+
Sbjct: 2 AHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIK 61
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+LEV V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 62 NLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 110
>gi|323340398|ref|ZP_08080655.1| 30S ribosomal protein S11 [Lactobacillus ruminis ATCC 25644]
gi|323092174|gb|EFZ34789.1| 30S ribosomal protein S11 [Lactobacillus ruminis ATCC 25644]
Length = 128
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/115 (57%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++PFAAQ+A + + A
Sbjct: 14 NIESGVAHIHSTFNNTLVMITDVHGNAVAWSSAGALGFKGSRKSTPFAAQMAAEAAAKGA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+HGM ++EV V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 74 MDHGMKNVEVAVKGPGSGREAAIRALQATGLEVTSIKDVTPVPHNGCRPPKRRRV 128
>gi|269925857|ref|YP_003322480.1| ribosomal protein S11 [Thermobaculum terrenum ATCC BAA-798]
gi|269789517|gb|ACZ41658.1| ribosomal protein S11 [Thermobaculum terrenum ATCC BAA-798]
Length = 134
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ GRAH+VS+FNNT ITITDP GN + WSS GF GSRK++P+AAQVA ++ + KA
Sbjct: 21 VPRGRAHIVSSFNNTIITITDPSGNVLCWSSAGASGFKGSRKSTPYAAQVAAENAARKAM 80
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+GM ++V V G GAGR++A+R+L+A G ++SI DVT I HNGCRP K RR+
Sbjct: 81 EYGMRQVDVFVKGPGAGREAAIRSLQAAGLNVMSISDVTPIPHNGCRPPKSRRV 134
>gi|157414141|ref|YP_001485007.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9215]
gi|166991581|sp|A8G740|RS11_PROM2 RecName: Full=30S ribosomal protein S11
gi|157388716|gb|ABV51421.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9215]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + ++N+ +G H+ STFNNT ++I+D G+ I+WSS GF G+RK +
Sbjct: 1 MAATVKKTGSKKSKRNVPNGVVHIQSTFNNTIVSISDTSGHVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM +EV V G GAGR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALDQGMRQIEVLVRGPGAGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRPKRRRV 130
>gi|215400752|ref|YP_002327513.1| ribosomal protein S11 [Vaucheria litorea]
gi|194441202|gb|ACF70930.1| ribosomal protein S11 [Vaucheria litorea]
Length = 126
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 58/124 (46%), Positives = 84/124 (67%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ + + ++NI SG H+ STFNNT IT+TD GN++AW+S GF G+RK + FAAQ+
Sbjct: 3 QKTKKKIKRNIPSGIVHIHSTFNNTIITVTDLKGNSVAWASAGTAGFKGTRKGTSFAAQL 62
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + +A + G+ ++V V G G GR++A+RAL+ G IVSI D+T I +NGCRP
Sbjct: 63 AAKKATLQAIDSGLKKVKVLVKGRGPGRETAIRALQTTGVKIVSIKDITPIPYNGCRPPN 122
Query: 126 RRRI 129
RRR+
Sbjct: 123 RRRV 126
>gi|146319945|ref|YP_001199656.1| 30S ribosomal protein S11 [Streptococcus suis 98HAH33]
gi|253751014|ref|YP_003024155.1| 30S ribosomal protein S11 [Streptococcus suis SC84]
gi|253752914|ref|YP_003026054.1| 30S ribosomal protein S11 [Streptococcus suis P1/7]
gi|253754739|ref|YP_003027879.1| 30S ribosomal protein S11 [Streptococcus suis BM407]
gi|330831945|ref|YP_004400770.1| 30S ribosomal protein S11 [Streptococcus suis ST3]
gi|152060825|sp|A4VYR7|RS11_STRS2 RecName: Full=30S ribosomal protein S11
gi|152060827|sp|A4VSH7|RS11_STRSY RecName: Full=30S ribosomal protein S11
gi|145690751|gb|ABP91256.1| 30S ribosomal protein S11 [Streptococcus suis 98HAH33]
gi|251815303|emb|CAZ50871.1| 30S ribosomal protein S11 [Streptococcus suis SC84]
gi|251817203|emb|CAZ54926.1| 30S ribosomal protein S11 [Streptococcus suis BM407]
gi|251819159|emb|CAR44292.1| 30S ribosomal protein S11 [Streptococcus suis P1/7]
gi|292557556|gb|ADE30557.1| ribosomal protein S11 [Streptococcus suis GZ1]
gi|319757265|gb|ADV69207.1| 30S ribosomal protein S11 [Streptococcus suis JS14]
gi|329306168|gb|AEB80584.1| 30S ribosomal protein S11 [Streptococcus suis ST3]
Length = 127
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|57234753|ref|YP_181244.1| 30S ribosomal protein S11 [Dehalococcoides ethenogenes 195]
gi|270307866|ref|YP_003329924.1| ribosomal protein S11 [Dehalococcoides sp. VS]
gi|91207741|sp|Q3Z955|RS11_DEHE1 RecName: Full=30S ribosomal protein S11
gi|57225201|gb|AAW40258.1| ribosomal protein S11 [Dehalococcoides ethenogenes 195]
gi|270153758|gb|ACZ61596.1| ribosomal protein S11 [Dehalococcoides sp. VS]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +E+K I G+A V +TFNNT +T+TD GN IAW+S GF GSRK +
Sbjct: 1 MAVKKRAGAKKKEKKVIPVGKAFVQATFNNTIVTLTDLQGNVIAWASCGTAGFKGSRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + KA G+ +EV V G G+GR++A+R+L+A G + +I DVT I HN
Sbjct: 61 PYAAQMAAQAAARKAAESGLRQVEVLVKGPGSGREAAIRSLQASGINVTAIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|225024811|ref|ZP_03714003.1| hypothetical protein EIKCOROL_01698 [Eikenella corrodens ATCC
23834]
gi|224942414|gb|EEG23623.1| hypothetical protein EIKCOROL_01698 [Eikenella corrodens ATCC
23834]
Length = 131
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPS--RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ + R R + RK + G H+ ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKATTAARTRKKVRKVVNDGIVHIHASFNNTIITITDRQGNVLSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + AQ +G+ +LEV++ G G GR+S++R+L AIGF IVSI DVT + H
Sbjct: 61 TPFAAQVAAEAAGKAAQEYGVKNLEVRIKGPGPGRESSVRSLNAIGFKIVSITDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RRI
Sbjct: 121 NGCRPPKKRRI 131
>gi|28493496|ref|NP_787657.1| 30S ribosomal protein S11 [Tropheryma whipplei str. Twist]
gi|28572391|ref|NP_789171.1| 30S ribosomal protein S11 [Tropheryma whipplei TW08/27]
gi|54039339|sp|P66366|RS11_TROW8 RecName: Full=30S ribosomal protein S11
gi|54042113|sp|P66365|RS11_TROWT RecName: Full=30S ribosomal protein S11
gi|28410522|emb|CAD66908.1| 30S ribosomal protein S11 [Tropheryma whipplei TW08/27]
gi|28476538|gb|AAO44626.1| 30S ribosomal protein S11 [Tropheryma whipplei str. Twist]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K SR R + RKNI +G AH+ STFNNT +TITD GN I WSS VGF GSRK++
Sbjct: 1 MSKQAQSRSRKKARKNIPAGLAHIKSTFNNTIVTITDLSGNVIGWSSSGAVGFKGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + AQ HG+ ++V V G G+GR++A+R+L+ G I SI D T +A N
Sbjct: 61 PYAAQMAADAAARSAQEHGVKKVDVFVKGPGSGRETAIRSLQTAGLEIGSISDTTPLAFN 120
Query: 120 GCRPRKRRRI 129
GCRP K+R +
Sbjct: 121 GCRPPKKRLV 130
>gi|318042542|ref|ZP_07974498.1| 30S ribosomal protein S11 [Synechococcus sp. CB0101]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKSGAKKTKRNVPNGVAHIQSTFNNTIVSITDTAGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|315640137|ref|ZP_07895259.1| 30S ribosomal protein S11 [Enterococcus italicus DSM 15952]
gi|315484114|gb|EFU74588.1| 30S ribosomal protein S11 [Enterococcus italicus DSM 15952]
Length = 129
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAAKKVSRKRRVKKNIESGIAHIHSTFNNTIVMITDTHGNALAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +EV V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLRIVEVTVKGPGSGREAAIRSLQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|309812368|ref|ZP_07706123.1| 30S ribosomal protein S11 [Dermacoccus sp. Ellin185]
gi|308433673|gb|EFP57550.1| 30S ribosomal protein S11 [Dermacoccus sp. Ellin185]
Length = 135
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++R +E+KN+ +G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P
Sbjct: 7 MAAGAKKVRRKEKKNVAAGQAHIKSTFNNTIVSITDPTGAVISWASAGQVGFKGSRKSTP 66
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + + +A +HGM ++V V G G+GR++A+R+L A G + +I DVT HNG
Sbjct: 67 YAAQMAAEAAARRAMDHGMRKVDVFVKGPGSGRETAIRSLTATGLEVGAISDVTPTPHNG 126
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 127 VRPPKRRRV 135
>gi|124514418|gb|EAY55931.1| ribosomal protein S11 [Leptospirillum rubarum]
gi|206602701|gb|EDZ39182.1| Ribosomal protein S11 [Leptospirillum sp. Group II '5-way CG']
Length = 128
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 79/115 (68%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G H+ ++FNNT I+ DP+G+ ++WSS GF GSRK++PFAAQ A + + KA
Sbjct: 14 NVPVGIVHIHASFNNTIISFADPNGDVVSWSSAGAQGFKGSRKSTPFAAQKAAEVAAKKA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM + +V V G GAGR+SA+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 74 VDSGMKTCDVYVKGPGAGRESAIRALQTFGLKINLIKDVTPIPHNGCRPPKRRRV 128
>gi|328953132|ref|YP_004370466.1| 30S ribosomal protein S11 [Desulfobacca acetoxidans DSM 11109]
gi|328453456|gb|AEB09285.1| 30S ribosomal protein S11 [Desulfobacca acetoxidans DSM 11109]
Length = 131
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/131 (55%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K R + +E+KNI +G AH+ STFNNT +TITDP GN ++WSS + GF GSRK+
Sbjct: 1 MAKVTRRGVKKKKEKKNIPTGVAHIQSTFNNTIVTITDPAGNVVSWSSSGIQGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A +D + KA GM +++V V G GAGR++A+RAL+ GFTI I DVT I H
Sbjct: 61 TPFAAQLAAEDAAKKAMEQGMRTIDVFVKGPGAGREAAIRALQVAGFTINLIRDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|115604966|ref|YP_784419.1| ribosomal protein S11 [Drimys granadensis]
gi|122164408|sp|Q06GW4|RR11_DRIGR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|112032694|gb|ABH88329.1| ribosomal protein S11 [Drimys granadensis]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K RI R + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +
Sbjct: 1 MAKPIPRIGSRRNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HN
Sbjct: 61 PFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|307683485|dbj|BAJ19721.1| ribosomal protein S11 [Pseudotsuga sinensis var. wilsoniana]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKN-IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI +R+ +N ++ G HV ++FNNT +T+TD G ++WSS GF G+R+ +
Sbjct: 1 MSKTTRRIGSRKNENRVLKGVIHVQASFNNTIVTVTDVRGQVLSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|330993872|ref|ZP_08317804.1| 30S ribosomal protein S11 [Gluconacetobacter sp. SXCC-1]
gi|329759140|gb|EGG75652.1| 30S ribosomal protein S11 [Gluconacetobacter sp. SXCC-1]
Length = 110
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 70/109 (64%), Positives = 89/109 (81%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
AHV+STFNNT ITI+D GN IAWSS GF GSRK++P+AAQVA +D KA+ HGM
Sbjct: 2 AHVLSTFNNTMITISDAQGNAIAWSSAGAQGFKGSRKSTPYAAQVAAEDAGRKAREHGME 61
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+LE++VSG G+GR+SALRAL+A+GF+I +I D+T + HNGCRPRKRRR+
Sbjct: 62 TLEIEVSGPGSGRESALRALQAVGFSITAIRDMTPVPHNGCRPRKRRRV 110
>gi|260886901|ref|ZP_05898164.1| 30S ribosomal protein S11 [Selenomonas sputigena ATCC 35185]
gi|330839301|ref|YP_004413881.1| 30S ribosomal protein S11 [Selenomonas sputigena ATCC 35185]
gi|260863500|gb|EEX78000.1| 30S ribosomal protein S11 [Selenomonas sputigena ATCC 35185]
gi|329747065|gb|AEC00422.1| 30S ribosomal protein S11 [Selenomonas sputigena ATCC 35185]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNNT +T+TD GN ++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 16 NIEYGVAHISSTFNNTIVTLTDKSGNALSWASAGGLGFRGSRKSTPFAAQMAAEVAAKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 76 MEHGLKQVEVYVKGPGAGREAAIRSLQATGLEVNMIKDVTPIPHNGCRPPKRRRV 130
>gi|24380344|ref|NP_722299.1| 30S ribosomal protein S11 [Streptococcus mutans UA159]
gi|290581265|ref|YP_003485657.1| 30S ribosomal protein S11 [Streptococcus mutans NN2025]
gi|48474764|sp|P59378|RS11_STRMU RecName: Full=30S ribosomal protein S11
gi|24378362|gb|AAN59605.1|AE015023_6 30S ribosomal protein S11 [Streptococcus mutans UA159]
gi|254998164|dbj|BAH88765.1| 30S ribosomal protein S11 [Streptococcus mutans NN2025]
Length = 127
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ ++EV V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|227509955|ref|ZP_03940004.1| ribosomal protein S11 [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227512888|ref|ZP_03942937.1| ribosomal protein S11 [Lactobacillus buchneri ATCC 11577]
gi|227523016|ref|ZP_03953065.1| ribosomal protein S11 [Lactobacillus hilgardii ATCC 8290]
gi|227083888|gb|EEI19200.1| ribosomal protein S11 [Lactobacillus buchneri ATCC 11577]
gi|227089834|gb|EEI25146.1| ribosomal protein S11 [Lactobacillus hilgardii ATCC 8290]
gi|227190561|gb|EEI70628.1| ribosomal protein S11 [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 129
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S + R +KNI SG AH+ STFNNT + ITD GN IAWSS +GF GSRK++P
Sbjct: 1 MVNKKSSRKRRTKKNIASGVAHIHSTFNNTLVMITDTQGNAIAWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM S+EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSSMEHGMKSVEVAVKGPGSGREAAIRALQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|325955021|ref|YP_004238681.1| 30S ribosomal protein S11 [Weeksella virosa DSM 16922]
gi|323437639|gb|ADX68103.1| 30S ribosomal protein S11 [Weeksella virosa DSM 16922]
Length = 129
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 84/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ ++ R+ +G+AH+ ++FNN IT+T+ +G I+WSS +GF GS+KN+P
Sbjct: 1 MAKNTKVVKKRKVVVEATGQAHIQASFNNVIITLTNKNGEVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQVA D ++ A G+ ++V V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQVAAQDATSTAYEAGLRRVKVFVKGPGQGRESAIRTIHNGGIEVSEIVDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|294055198|ref|YP_003548856.1| 30S ribosomal protein S11 [Coraliomargarita akajimensis DSM 45221]
gi|293614531|gb|ADE54686.1| 30S ribosomal protein S11 [Coraliomargarita akajimensis DSM 45221]
Length = 170
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/121 (52%), Positives = 83/121 (68%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R + KNI SG +V++TFNNT++T TD GN I+WSS F GSRK++ +AAQV T
Sbjct: 50 RAKGSKNITSGIVNVLATFNNTKVTFTDARGNVISWSSAGKCNFRGSRKSTAYAAQVVTQ 109
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
D A +HGM + VK+ G G GRDSA+RAL+++G + I DVT + HNGCRP KRRR
Sbjct: 110 DAGRVAISHGMKEVVVKLKGPGMGRDSAVRALQSLGMVVTEIIDVTPVPHNGCRPPKRRR 169
Query: 129 I 129
+
Sbjct: 170 V 170
>gi|269469224|gb|EEZ80755.1| ribosomal protein S11 [uncultured SUP05 cluster bacterium]
Length = 127
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P I+ + +K + G AH+ +TFNNT + ITD HGN + W++ GF GSRK++P
Sbjct: 1 MAKTP--IKKKSKKIVSDGIAHIHATFNNTIVMITDRHGNAVCWATAGGAGFRGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA +C KA GM +L+V+V G G GRDSA+R L A G I SI DVT I HNG
Sbjct: 59 FAAQVAAGNCGEKALTFGMKNLDVRVKGPGPGRDSAIRGLNAQGLKIQSITDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPSKKRRV 127
>gi|224417909|ref|ZP_03655915.1| 30S ribosomal protein S11 [Helicobacter canadensis MIT 98-5491]
gi|242309343|ref|ZP_04808498.1| 30S ribosomal protein S11 [Helicobacter pullorum MIT 98-5489]
gi|253827248|ref|ZP_04870133.1| 30S ribosomal protein S11 [Helicobacter canadensis MIT 98-5491]
gi|313141450|ref|ZP_07803643.1| 30S ribosomal protein S11 [Helicobacter canadensis MIT 98-5491]
gi|239523914|gb|EEQ63780.1| 30S ribosomal protein S11 [Helicobacter pullorum MIT 98-5489]
gi|253510654|gb|EES89313.1| 30S ribosomal protein S11 [Helicobacter canadensis MIT 98-5491]
gi|313130481|gb|EFR48098.1| 30S ribosomal protein S11 [Helicobacter canadensis MIT 98-5491]
Length = 130
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G H+ + FNNT +TITD GN I WS+ +GF GS+K++P
Sbjct: 1 MAKRNVTKKRVVKKNIARGIIHISAAFNNTSVTITDEMGNVICWSTAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D +KA+ HG+ L VK+ G G+GR++A+++L +I G ++ DVT + HN
Sbjct: 61 YAAQQAVEDAVSKAKEHGIKELGVKIQGPGSGRETAVKSLGSIEGIKVLWFKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|154498911|ref|ZP_02037289.1| hypothetical protein BACCAP_02903 [Bacteroides capillosus ATCC
29799]
gi|150271751|gb|EDM98977.1| hypothetical protein BACCAP_02903 [Bacteroides capillosus ATCC
29799]
Length = 135
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/121 (52%), Positives = 88/121 (72%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ RERKN+ G+ H+ S+FNNT +T+TD GN ++W+S +GF GSRK++PFAAQ A +
Sbjct: 15 KRRERKNVEKGQVHIRSSFNNTMVTVTDMGGNALSWASSGGLGFRGSRKSTPFAAQTAAE 74
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ A HG+ ++EV V G GAGR++A+RAL+A+G + I DVT I HNGCRP KRRR
Sbjct: 75 TAAKAAMEHGLKTVEVYVKGPGAGREAAIRALQAVGLEVTLIKDVTPIPHNGCRPPKRRR 134
Query: 129 I 129
+
Sbjct: 135 V 135
>gi|65317582|ref|ZP_00390541.1| COG0100: Ribosomal protein S11 [Bacillus anthracis str. A2012]
Length = 129
Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++P
Sbjct: 1 MARKTNTRXKRVKKNIEAGVAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A HG+ +L V V G GAGR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAETAAKAAMEHGLKTLXVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|289759622|ref|ZP_06519000.1| LOW QUALITY PROTEIN: 30S ribosomal protein S11 [Mycobacterium
tuberculosis T85]
gi|289715186|gb|EFD79198.1| LOW QUALITY PROTEIN: 30S ribosomal protein S11 [Mycobacterium
tuberculosis T85]
Length = 126
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PFAA
Sbjct: 1 EGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPFAA 60
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A ++ + KAQ+HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG RP
Sbjct: 61 QLAAENAARKAQDHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGVRP 120
Query: 124 RKRRRI 129
KRRR+
Sbjct: 121 PKRRRV 126
>gi|116075745|ref|ZP_01473004.1| 30S ribosomal protein S11 [Synechococcus sp. RS9916]
gi|116067060|gb|EAU72815.1| 30S ribosomal protein S11 [Synechococcus sp. RS9916]
Length = 130
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + ++N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKTVKKSGPKKAKRNVPNGVAHIQSTFNNTIVSITDTTGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAARRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|327402759|ref|YP_004343597.1| 30S ribosomal protein S11P [Fluviicola taffensis DSM 16823]
gi|327318267|gb|AEA42759.1| SSU ribosomal protein S11P [Fluviicola taffensis DSM 16823]
Length = 128
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G AH+ +TFNN I++T+ G I+WSS +GF GS+KN+P+AAQVA +D S +A + G
Sbjct: 18 GEAHIQATFNNVIISLTNNAGQVISWSSAGKMGFKGSKKNTPYAAQVAAEDASKEAHDFG 77
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + V V G GAGR+SA+RA+ G ++ I DVT + HNGCRP KRRR+
Sbjct: 78 LRRVRVFVKGPGAGRESAIRAIHNHGIEVIEIIDVTPLPHNGCRPPKRRRV 128
>gi|295396440|ref|ZP_06806602.1| 30S ribosomal protein S11 [Brevibacterium mcbrellneri ATCC 49030]
gi|294970742|gb|EFG46655.1| 30S ribosomal protein S11 [Brevibacterium mcbrellneri ATCC 49030]
Length = 133
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 62/125 (49%), Positives = 92/125 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
S R + +K++V+G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P+AA
Sbjct: 8 SARPTRRKVKKSVVNGQAHIKSTFNNTIVSITDPTGAVISWASSGEVGFKGSRKSTPYAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT + HNGCRP
Sbjct: 68 QMAAESAARRAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLELGTIQDVTPVPHNGCRP 127
Query: 124 RKRRR 128
KRRR
Sbjct: 128 PKRRR 132
>gi|227879267|ref|ZP_03997137.1| ribosomal protein S11 [Lactobacillus crispatus JV-V01]
gi|227894545|ref|ZP_04012350.1| ribosomal protein S11 [Lactobacillus ultunensis DSM 16047]
gi|256844454|ref|ZP_05549940.1| 30S ribosomal protein S11 [Lactobacillus crispatus 125-2-CHN]
gi|256849158|ref|ZP_05554591.1| 30S ribosomal protein S11 [Lactobacillus crispatus MV-1A-US]
gi|260102380|ref|ZP_05752617.1| 30S ribosomal protein S11 [Lactobacillus helveticus DSM 20075]
gi|262047174|ref|ZP_06020132.1| 30S ribosomal protein S11 [Lactobacillus crispatus MV-3A-US]
gi|293380401|ref|ZP_06626472.1| 30S ribosomal protein S11 [Lactobacillus crispatus 214-1]
gi|295692184|ref|YP_003600794.1| 30S ribosomal protein s11 [Lactobacillus crispatus ST1]
gi|315037555|ref|YP_004031123.1| 30S ribosomal protein S11 [Lactobacillus amylovorus GRL 1112]
gi|325956028|ref|YP_004286638.1| 30S ribosomal protein S11 [Lactobacillus acidophilus 30SC]
gi|227861161|gb|EEJ68810.1| ribosomal protein S11 [Lactobacillus crispatus JV-V01]
gi|227863704|gb|EEJ71125.1| ribosomal protein S11 [Lactobacillus ultunensis DSM 16047]
gi|256613532|gb|EEU18735.1| 30S ribosomal protein S11 [Lactobacillus crispatus 125-2-CHN]
gi|256713934|gb|EEU28922.1| 30S ribosomal protein S11 [Lactobacillus crispatus MV-1A-US]
gi|260083824|gb|EEW67944.1| 30S ribosomal protein S11 [Lactobacillus helveticus DSM 20075]
gi|260572419|gb|EEX28981.1| 30S ribosomal protein S11 [Lactobacillus crispatus MV-3A-US]
gi|290923084|gb|EFE00016.1| 30S ribosomal protein S11 [Lactobacillus crispatus 214-1]
gi|295030290|emb|CBL49769.1| 30S ribosomal protein S11 [Lactobacillus crispatus ST1]
gi|312275688|gb|ADQ58328.1| 30S ribosomal protein S11 [Lactobacillus amylovorus GRL 1112]
gi|325332593|gb|ADZ06501.1| 30S ribosomal protein S11 [Lactobacillus acidophilus 30SC]
gi|327182851|gb|AEA31298.1| 30S ribosomal protein S11 [Lactobacillus amylovorus GRL 1118]
gi|328463389|gb|EGF35062.1| 30S ribosomal protein S11 [Lactobacillus helveticus MTCC 5463]
Length = 129
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MPAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR+SA+R+L+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAMDQGMKHVEVSVKGPGAGRESAIRSLQATGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|163816003|ref|ZP_02207373.1| hypothetical protein COPEUT_02183 [Coprococcus eutactus ATCC 27759]
gi|158448813|gb|EDP25808.1| hypothetical protein COPEUT_02183 [Coprococcus eutactus ATCC 27759]
gi|295093659|emb|CBK82750.1| SSU ribosomal protein S11P [Coprococcus sp. ART55/1]
Length = 131
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K ++ ++R ++ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K+
Sbjct: 1 MAKQATKKVAKKRVRKSVQHGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFKGSKKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + A +G+ +++V V G G+GR++A+RAL A G +VSI DVT + H
Sbjct: 61 TPYAAQMAAETAAKAAAPYGLKTIDVFVKGPGSGREAAIRALSACGIDVVSIKDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|161506897|ref|YP_001576851.1| 30S ribosomal protein S11 [Lactobacillus helveticus DPC 4571]
gi|172048387|sp|A8YXM9|RS11_LACH4 RecName: Full=30S ribosomal protein S11
gi|160347886|gb|ABX26560.1| 30S ribosomal protein S11 [Lactobacillus helveticus DPC 4571]
gi|323465847|gb|ADX69534.1| 30S ribosomal protein S11 [Lactobacillus helveticus H10]
Length = 130
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 2 MPAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 61
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR+SA+R+L+A G I +I DVT + HNG
Sbjct: 62 FAAQMAAEAAAKSAMDQGMKHVEVSVKGPGAGRESAIRSLQATGLEITAIRDVTPVPHNG 121
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 122 SRPPKRRRV 130
>gi|261749447|ref|YP_003257133.1| 30S ribosomal protein S11 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497540|gb|ACX83990.1| 30S ribosomal protein S11 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 128
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + + G AH+ STFNN IT+T+ G IAWSS + F GS+KN+P
Sbjct: 1 MAKSSL-GKKKSIVVDSLGVAHIQSTFNNIIITLTNKKGEVIAWSSAGKMNFKGSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A ++ + + N G+ +EVKV G GAGRD+A+RAL G + I D+T + HNG
Sbjct: 60 YAAQMAAENVAKEGLNAGIKKVEVKVKGPGAGRDAAIRALSNSGIVVTLIKDITPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|331699147|ref|YP_004335386.1| 30S ribosomal protein S11 [Pseudonocardia dioxanivorans CB1190]
gi|326953836|gb|AEA27533.1| 30S ribosomal protein S11 [Pseudonocardia dioxanivorans CB1190]
Length = 135
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P ++R +E+KN+ G AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PF
Sbjct: 8 AAGPKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGAVIAWASAGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KA HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 68 AAQMAAENAARKAAEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|291298740|ref|YP_003510018.1| 30S ribosomal protein S11 [Stackebrandtia nassauensis DSM 44728]
gi|290567960|gb|ADD40925.1| ribosomal protein S11 [Stackebrandtia nassauensis DSM 44728]
Length = 132
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+++R +E+KN+ +G AH+ STFNNT ++ITDP G I+WSS VGF GSRK++P+AAQ+
Sbjct: 9 TKLRRKEKKNVAAGHAHIKSTFNNTIVSITDPAGAVISWSSSGQVGFKGSRKSTPYAAQM 68
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + +A HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP K
Sbjct: 69 AAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGSISDVTPQPHNGCRPPK 128
Query: 126 RRRI 129
RRR+
Sbjct: 129 RRRV 132
>gi|325108638|ref|YP_004269706.1| 30S ribosomal protein S11P [Planctomyces brasiliensis DSM 5305]
gi|324968906|gb|ADY59684.1| SSU ribosomal protein S11P [Planctomyces brasiliensis DSM 5305]
Length = 126
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R R+N+ AH+ +TFNNT +TITD +G + W++ VGF GSRK++P
Sbjct: 1 MAKTK---KKRVRRNVTKAIAHIKATFNNTLVTITDTNGEVLTWAAAGTVGFKGSRKSTP 57
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + C+ +A+ G+ ++V+V G G+GR+SA+ L+A G TI I DVT + HNG
Sbjct: 58 FAAQRAAEVCADRAKKFGVREMDVRVKGPGSGRESAITGLQAPGITIKMIEDVTPLPHNG 117
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 118 CRPPKKRRV 126
>gi|224437307|ref|ZP_03658279.1| 30S ribosomal protein S11 [Helicobacter cinaedi CCUG 18818]
gi|313143762|ref|ZP_07805955.1| 30S ribosomal protein S11 [Helicobacter cinaedi CCUG 18818]
gi|313128793|gb|EFR46410.1| 30S ribosomal protein S11 [Helicobacter cinaedi CCUG 18818]
Length = 130
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G + ++FNNT +T+TD GN + W++ +GF GS+K++P
Sbjct: 1 MAKKSITKKKGAKKNITRGVVCISASFNNTNVTVTDEMGNVLCWATAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A + KA+ G+ + +KV G G+GR++A++++ AI G ++ + DVT + HN
Sbjct: 61 YAAQQAVESAMEKAKECGIKEVGIKVQGPGSGRETAVKSVGAIEGIKVLWLKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|15610595|ref|NP_217976.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis H37Rv]
gi|15843054|ref|NP_338091.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis CDC1551]
gi|148663324|ref|YP_001284847.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis H37Ra]
gi|148824669|ref|YP_001289423.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis F11]
gi|167966774|ref|ZP_02549051.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis H37Ra]
gi|215405498|ref|ZP_03417679.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis 02_1987]
gi|215413373|ref|ZP_03422057.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis 94_M4241A]
gi|215428966|ref|ZP_03426885.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis T92]
gi|215432430|ref|ZP_03430349.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis EAS054]
gi|218755237|ref|ZP_03534033.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis GM 1503]
gi|219559527|ref|ZP_03538603.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis T17]
gi|253800504|ref|YP_003033505.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis KZN
1435]
gi|254234051|ref|ZP_04927376.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis C]
gi|254366060|ref|ZP_04982105.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis str.
Haarlem]
gi|254552562|ref|ZP_05143009.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260202642|ref|ZP_05770133.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis T46]
gi|289445059|ref|ZP_06434803.1| SSU ribosomal protein S11 [Mycobacterium tuberculosis T46]
gi|289555730|ref|ZP_06444940.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis KZN 605]
gi|289571693|ref|ZP_06451920.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis T17]
gi|289747292|ref|ZP_06506670.1| ribosomal protein S11 [Mycobacterium tuberculosis 02_1987]
gi|289752183|ref|ZP_06511561.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis T92]
gi|289755592|ref|ZP_06514970.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis EAS054]
gi|289763641|ref|ZP_06523019.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis GM 1503]
gi|297636118|ref|ZP_06953898.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis KZN 4207]
gi|297733118|ref|ZP_06962236.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis KZN R506]
gi|298526943|ref|ZP_07014352.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis 94_M4241A]
gi|306782525|ref|ZP_07420862.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu002]
gi|306786344|ref|ZP_07424666.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu003]
gi|306790713|ref|ZP_07429035.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu004]
gi|306799431|ref|ZP_07437733.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu006]
gi|306809463|ref|ZP_07446131.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu007]
gi|306969571|ref|ZP_07482232.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu009]
gi|306973925|ref|ZP_07486586.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu010]
gi|307081634|ref|ZP_07490804.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu011]
gi|307086240|ref|ZP_07495353.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu012]
gi|313660449|ref|ZP_07817329.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis KZN V2475]
gi|6094147|sp|O06326|RS11_MYCTU RecName: Full=30S ribosomal protein S11
gi|166231819|sp|A5U8D5|RS11_MYCTA RecName: Full=30S ribosomal protein S11
gi|2104382|emb|CAB08725.1| PROBABLE 30S RIBOSOMAL PROTEIN S11 RPSK [Mycobacterium tuberculosis
H37Rv]
gi|13883398|gb|AAK47905.1| ribosomal protein S11 [Mycobacterium tuberculosis CDC1551]
gi|124599580|gb|EAY58684.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis C]
gi|134151573|gb|EBA43618.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis str.
Haarlem]
gi|148507476|gb|ABQ75285.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis H37Ra]
gi|148723196|gb|ABR07821.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis F11]
gi|253322007|gb|ACT26610.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis KZN
1435]
gi|289417978|gb|EFD15218.1| SSU ribosomal protein S11 [Mycobacterium tuberculosis T46]
gi|289440362|gb|EFD22855.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis KZN 605]
gi|289545447|gb|EFD49095.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis T17]
gi|289687820|gb|EFD55308.1| ribosomal protein S11 [Mycobacterium tuberculosis 02_1987]
gi|289692770|gb|EFD60199.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis T92]
gi|289696179|gb|EFD63608.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis EAS054]
gi|289711147|gb|EFD75163.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis GM 1503]
gi|298496737|gb|EFI32031.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis 94_M4241A]
gi|308324842|gb|EFP13693.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu002]
gi|308329096|gb|EFP17947.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu003]
gi|308332904|gb|EFP21755.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu004]
gi|308340439|gb|EFP29290.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu006]
gi|308344303|gb|EFP33154.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu007]
gi|308352918|gb|EFP41769.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu009]
gi|308356761|gb|EFP45612.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu010]
gi|308360706|gb|EFP49557.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu011]
gi|308364321|gb|EFP53172.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu012]
gi|323717943|gb|EGB27132.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis
CDC1551A]
gi|326905305|gb|EGE52238.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis W-148]
gi|328460235|gb|AEB05658.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis KZN
4207]
Length = 139
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PF
Sbjct: 12 ARKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPF 71
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ+HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG
Sbjct: 72 AAQLAAENAARKAQDHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGV 131
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 132 RPPKRRRV 139
>gi|297564064|ref|YP_003683037.1| 30S ribosomal protein S11 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848513|gb|ADH70531.1| 30S ribosomal protein S11 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 134
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 94/126 (74%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ ++R +E+KNIV G AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P+AA
Sbjct: 9 AARKVRRKEKKNIVHGHAHIKSTFNNTIVSITDPTGAVISWASSGQVGFKGSRKSTPYAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT + HNGCRP
Sbjct: 69 QMAAEAAARRAQEHGVRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPVPHNGCRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 PKRRRV 134
>gi|284040596|ref|YP_003390526.1| 30S ribosomal protein S11 [Spirosoma linguale DSM 74]
gi|283819889|gb|ADB41727.1| 30S ribosomal protein S11 [Spirosoma linguale DSM 74]
Length = 131
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+ H+ +TFNN I+IT+ +G I+W+S +GF GS+KN+P+AAQ A +C+A A +
Sbjct: 19 PVGQVHIRATFNNIIISITNMNGQVISWASAGKMGFRGSKKNTPYAAQTAASNCAAVAHD 78
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV V G G+GR+SA+R ++ G + +I D+T + HNGCRP KRRR+
Sbjct: 79 LGMRKAEVFVKGPGSGRESAIRTIQNSGIEVTTIRDITPLPHNGCRPPKRRRV 131
>gi|297571896|ref|YP_003697670.1| 30S ribosomal protein S11 [Arcanobacterium haemolyticum DSM 20595]
gi|296932243|gb|ADH93051.1| 30S ribosomal protein S11 [Arcanobacterium haemolyticum DSM 20595]
Length = 130
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK+ R R RKN+V+G+AH+ STFNNT ++ITDP+G IA +S +VGF GSRK++P+
Sbjct: 3 PKTQRRSRRTVRKNVVNGQAHIKSTFNNTIVSITDPNGEVIAQTSSGMVGFKGSRKSTPY 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + +A GM ++V V G G+GR++A+R+L A G + SI DVT AHNGC
Sbjct: 63 AAQLAAENAARRAMEAGMKKVDVFVKGPGSGRETAIRSLTASGLEVTSISDVTPQAHNGC 122
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 123 RPPKRRRV 130
>gi|254495365|ref|ZP_05108289.1| 30S ribosomal protein S11 [Polaribacter sp. MED152]
gi|85819719|gb|EAQ40876.1| 30S ribosomal protein S11 [Polaribacter sp. MED152]
Length = 127
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ S+ R I G AHV +TFNN I++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKASSKKRKVIIDAI--GEAHVSATFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC+ A+ G+ ++V V G G GR+SA+R++ G + I DVT I HNG
Sbjct: 59 YAAQLAAEDCANVAKEAGLRKVKVYVKGPGNGRESAIRSIHNAGIEVTEIIDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|319942196|ref|ZP_08016512.1| ribosomal protein S11 [Sutterella wadsworthensis 3_1_45B]
gi|319804249|gb|EFW01141.1| ribosomal protein S11 [Sutterella wadsworthensis 3_1_45B]
Length = 133
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ +R R + RK + G AHV ++FNNT ITITD GN IA SS GF GSRK++PFAA
Sbjct: 8 ASARGRKKVRKVVTEGIAHVHASFNNTIITITDRQGNAIAASSSGAQGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
QVA D A HG+ ++EV++ G G GR+S++RAL A+G + SI DVT I HNG RP
Sbjct: 68 QVAADVAGKIAIEHGLKNVEVRIWGPGPGRESSVRALNALGIRVTSIQDVTPIPHNGVRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 SKRRRV 133
>gi|254819219|ref|ZP_05224220.1| 30S ribosomal protein S11 [Mycobacterium intracellulare ATCC 13950]
Length = 138
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 91/124 (73%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PFAAQ+
Sbjct: 15 QKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPFAAQL 74
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG RP K
Sbjct: 75 AAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPK 134
Query: 126 RRRI 129
RRR+
Sbjct: 135 RRRV 138
>gi|313183898|ref|YP_004021752.1| ribosomal protein S11 [Equisetum arvense]
gi|281371618|gb|ADA63551.1| ribosomal protein S11 [Equisetum arvense]
Length = 131
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/120 (44%), Positives = 77/120 (64%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ ++ I G HV +FNNT +T+TD G ++WSS V GF G++K++PFAAQ A ++
Sbjct: 12 RKGKRKIPKGVIHVQVSFNNTIVTVTDIRGQVVSWSSAGVCGFKGAKKSTPFAAQTAAEN 71
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV +SG G GRD+ALR++R G + + DVT I HNGCRP ++RR+
Sbjct: 72 AINTLIDQGMKQAEVMISGPGPGRDTALRSIRRSGLILSFVRDVTPIPHNGCRPPRKRRV 131
>gi|238855093|ref|ZP_04645421.1| 30S ribosomal protein S11 [Lactobacillus jensenii 269-3]
gi|256852061|ref|ZP_05557448.1| 30S ribosomal protein S11 [Lactobacillus jensenii 27-2-CHN]
gi|260661370|ref|ZP_05862283.1| 30S ribosomal protein S11 [Lactobacillus jensenii 115-3-CHN]
gi|260664878|ref|ZP_05865729.1| 30S ribosomal protein S11 [Lactobacillus jensenii SJ-7A-US]
gi|282931914|ref|ZP_06337386.1| 30S ribosomal protein S11 [Lactobacillus jensenii 208-1]
gi|282932824|ref|ZP_06338224.1| 30S ribosomal protein S11 [Lactobacillus jensenii 208-1]
gi|297205064|ref|ZP_06922460.1| 30S ribosomal protein S11 [Lactobacillus jensenii JV-V16]
gi|313472572|ref|ZP_07813061.1| 30S ribosomal protein S11 [Lactobacillus jensenii 1153]
gi|238832337|gb|EEQ24646.1| 30S ribosomal protein S11 [Lactobacillus jensenii 269-3]
gi|239530012|gb|EEQ69013.1| 30S ribosomal protein S11 [Lactobacillus jensenii 1153]
gi|256615473|gb|EEU20663.1| 30S ribosomal protein S11 [Lactobacillus jensenii 27-2-CHN]
gi|260547825|gb|EEX23802.1| 30S ribosomal protein S11 [Lactobacillus jensenii 115-3-CHN]
gi|260561361|gb|EEX27334.1| 30S ribosomal protein S11 [Lactobacillus jensenii SJ-7A-US]
gi|281303053|gb|EFA95255.1| 30S ribosomal protein S11 [Lactobacillus jensenii 208-1]
gi|281303966|gb|EFA96096.1| 30S ribosomal protein S11 [Lactobacillus jensenii 208-1]
gi|297149642|gb|EFH29939.1| 30S ribosomal protein S11 [Lactobacillus jensenii JV-V16]
Length = 129
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MPAKKNTRKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + + GM +EV V G GAGR++A+R+L+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKASMDQGMKHVEVSVKGPGAGREAAIRSLQATGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|146298137|ref|YP_001192728.1| 30S ribosomal protein S11 [Flavobacterium johnsoniae UW101]
gi|189040415|sp|A5FN17|RS11_FLAJO RecName: Full=30S ribosomal protein S11
gi|146152555|gb|ABQ03409.1| 30S ribosomal protein S11 [Flavobacterium johnsoniae UW101]
Length = 127
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ ++ R + +G AH+ STFNN I++T+ G IAWSS +GF GS+KN+P
Sbjct: 1 MAKATAKKRKVIVE--STGEAHISSTFNNIIISLTNKKGEVIAWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCS A G+ ++V V G G GR+SA+R++ G + I DVT + HNG
Sbjct: 59 YAAQMAAEDCSKVALEAGLKKVKVYVKGPGNGRESAIRSIHNGGIEVTEIIDVTPMPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|116334244|ref|YP_795771.1| 30S ribosomal protein S11 [Lactobacillus brevis ATCC 367]
gi|122269074|sp|Q03PY2|RS11_LACBA RecName: Full=30S ribosomal protein S11
gi|116099591|gb|ABJ64740.1| SSU ribosomal protein S11P [Lactobacillus brevis ATCC 367]
Length = 129
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ +TFNNT + ITD GN IAWSS +GF GSRK++P
Sbjct: 1 MATRKTSRKRRVKKNIEAGVAHIHATFNNTLVMITDVQGNAIAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +Q HG+ S+EV V G G+GR+SA+RA++A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKASQEHGIKSVEVAVKGPGSGRESAIRAIQAAGIEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 TRPPKRRRV 129
>gi|289423666|ref|ZP_06425465.1| 30S ribosomal protein S11 [Peptostreptococcus anaerobius 653-L]
gi|289155916|gb|EFD04582.1| 30S ribosomal protein S11 [Peptostreptococcus anaerobius 653-L]
Length = 133
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNNT +T+TD HGN I+W+S +GF GSRK +PFA+Q+A + + A
Sbjct: 19 NIERGHAHIQSTFNNTIVTLTDVHGNAISWASSGQLGFKGSRKATPFASQMAAETAAKAA 78
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 79 MEHGLKTVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCRPPKRRRV 133
>gi|78189782|ref|YP_380120.1| 30S ribosomal protein S11 [Chlorobium chlorochromatii CaD3]
gi|91207736|sp|Q3APJ8|RS11_CHLCH RecName: Full=30S ribosomal protein S11
gi|78171981|gb|ABB29077.1| SSU ribosomal protein S11P [Chlorobium chlorochromatii CaD3]
Length = 127
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+QV ++ + +A +
Sbjct: 15 PEGAVHIKASFNNIMVTITDVQGNTVSWSSAGKNGFKGSKKNTPYASQVTSEAAAKEAFD 74
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM + V + G GAGRD+A+RAL+ G + +I D+T + HNGCRP KRRR+
Sbjct: 75 LGMRHVHVFIKGPGAGRDAAIRALQGAGLEVRTIKDITPLPHNGCRPPKRRRV 127
>gi|257054496|ref|YP_003132328.1| 30S ribosomal protein S11P [Saccharomonospora viridis DSM 43017]
gi|256584368|gb|ACU95501.1| SSU ribosomal protein S11P [Saccharomonospora viridis DSM 43017]
Length = 135
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/125 (52%), Positives = 93/125 (74%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KN+V G AH+ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ
Sbjct: 11 TKKVRRKEKKNVVHGHAHIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQ 70
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A ++ + KA HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP
Sbjct: 71 MAAENAARKAAEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPQPHNGCRPP 130
Query: 125 KRRRI 129
KRRR+
Sbjct: 131 KRRRV 135
>gi|160894730|ref|ZP_02075505.1| hypothetical protein CLOL250_02281 [Clostridium sp. L2-50]
gi|156863664|gb|EDO57095.1| hypothetical protein CLOL250_02281 [Clostridium sp. L2-50]
Length = 131
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K ++ ++R ++ G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K+
Sbjct: 1 MAKQVTKKVAKKRVRKSVQHGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFKGSKKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A + + A +G+ +++V V G G+GR++A+RAL A G +VSI DVT + H
Sbjct: 61 TPYAAQMAAETAAKAAAPYGLKTVDVMVKGPGSGREAAIRALAACGIDVVSIKDVTPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|227499170|ref|ZP_03929305.1| 30S ribosomal protein S11 [Acidaminococcus sp. D21]
gi|226904617|gb|EEH90535.1| 30S ribosomal protein S11 [Acidaminococcus sp. D21]
Length = 130
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MP-KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K R + + KNI +G AH+ STFNNT +TI+D G ++W+S +GF GSRK++
Sbjct: 1 MAGKKVVRNKRKVSKNIEAGVAHIRSTFNNTIVTISDTTGAVLSWASAGGMGFRGSRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + + A HG+ +EV V G GAGR++A+RAL+A G + SI DVT I HN
Sbjct: 61 PFAAQMAAETAAKAAMEHGLKRIEVFVKGPGAGREAAIRALQAAGLEVESIKDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|194335470|ref|YP_002017264.1| ribosomal protein S11 [Pelodictyon phaeoclathratiforme BU-1]
gi|226708394|sp|B4SBX2|RS11_PELPB RecName: Full=30S ribosomal protein S11
gi|194307947|gb|ACF42647.1| ribosomal protein S11 [Pelodictyon phaeoclathratiforme BU-1]
Length = 127
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+Q+ ++ + +A +
Sbjct: 15 PEGAVHIKASFNNIMVTITDLQGNTVSWSSAGKNGFKGSKKNTPYASQITSEAAAKEAYD 74
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM + V + G GAGRD+A+RAL+ G + +I D+T + HNGCRP KRRR+
Sbjct: 75 LGMRHVNVFIKGPGAGRDAAIRALQGAGLDVRTIKDITPLPHNGCRPPKRRRV 127
>gi|229915537|gb|ACQ90881.1| ribosomal protein S11 [Pedinomonas minor]
Length = 132
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/132 (40%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K ++ + + ++ + G H+ +TFNNT IT++ G AWSS GF G+RK
Sbjct: 1 MAKQSTKTSNLQKKAKRKVPKGVVHIQATFNNTIITVSTLKGEVFAWSSAGACGFRGARK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAA+ A + + K+ GM +V V G G+GR++A+R L+ G + I D+T I
Sbjct: 61 STPFAAKTAAEAAAKKSIEQGMKEAQVFVKGPGSGRETAIRGLQEAGLQVTLIRDITAIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RRI
Sbjct: 121 HNGCRPPKKRRI 132
>gi|194246758|ref|YP_002004397.1| 30S ribosomal protein S11 [Candidatus Phytoplasma mali]
gi|254811037|sp|B3R016|RS11_PHYMT RecName: Full=30S ribosomal protein S11
gi|193807115|emb|CAP18553.1| 30S ribosomal protein S11 [Candidatus Phytoplasma mali]
Length = 130
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/110 (55%), Positives = 79/110 (71%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G AH+ +TFNNT +TITD GNTI WSS +GF GSRK++PFAAQ+A+ + A HG
Sbjct: 20 GIAHIHTTFNNTILTITDLQGNTITWSSAGSLGFKGSRKSTPFAAQIASSTAAKAALEHG 79
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
M +EV + G GAGR++++R+L+A G I SI DVT + HNGCRP KR R
Sbjct: 80 MLKVEVFIKGPGAGREASIRSLQASGLEITSIRDVTTVPHNGCRPPKRPR 129
>gi|326792580|ref|YP_004310401.1| 30S ribosomal protein S11 [Clostridium lentocellum DSM 5427]
gi|326543344|gb|ADZ85203.1| 30S ribosomal protein S11 [Clostridium lentocellum DSM 5427]
Length = 135
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + R+RK++ G AH+ STFNNT +T+TD +GN ++W+S +GF GSRK++P+A
Sbjct: 9 KKVVTRKRRDRKHVERGVAHIQSTFNNTMVTLTDTNGNALSWASAGGLGFRGSRKSTPYA 68
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A + + A HG+ S+EV V G G+GR++A+RAL+A G + I DVT + HNGCR
Sbjct: 69 AQMAAETAAKAAMEHGLKSVEVMVKGPGSGREAAIRALQAAGLEVTLIKDVTPVPHNGCR 128
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 129 PPKRRRV 135
>gi|226202|prf||1501255A ribosomal protein S11
Length = 128
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + + R RKNI +G AH+ STFNNT +TITD HGN +AW+S +GF GSRK++PF
Sbjct: 1 ARRTNTRKRRVRKNIDTGIAHIRSTFNNTIVTITDVHGNALAWASAGSLGFKGSRKSTPF 60
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + + HGM ++EV V G GAGR++A+RAL+A G I +I DVT I H+GC
Sbjct: 61 AAQMAAEAAAKASMEHGMKTVEVNVKGPGAGREAAIRALQAAGLEITAIKDVTPIPHDGC 120
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 121 RPPKRRRV 128
>gi|307154819|ref|YP_003890203.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 7822]
gi|306985047|gb|ADN16928.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 7822]
Length = 130
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT +TI D G+ I+W+S GF G++K +PFAAQ A D+ + +A
Sbjct: 16 NVPNGIAHIQSTFNNTIVTIADTKGDVISWASAGSSGFKGAKKGTPFAAQTAADNAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 MEQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|300782637|ref|YP_003762928.1| 30S ribosomal protein S11 [Amycolatopsis mediterranei U32]
gi|299792151|gb|ADJ42526.1| small subunit ribosomal protein S11 [Amycolatopsis mediterranei
U32]
Length = 135
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ G AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PF
Sbjct: 8 AAGAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGAVIAWASSGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KA HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 68 AAQMAAENAARKAAEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPQPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|166367996|ref|YP_001660269.1| 30S ribosomal protein S11 [Microcystis aeruginosa NIES-843]
gi|189040421|sp|B0JY39|RS11_MICAN RecName: Full=30S ribosomal protein S11
gi|159027084|emb|CAO89269.1| rpsK [Microcystis aeruginosa PCC 7806]
gi|166090369|dbj|BAG05077.1| 30S ribosomal protein S11 [Microcystis aeruginosa NIES-843]
Length = 130
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G AH+ STFNNT +TI D G+ I+W+S GF G++K +PFAAQ A D+ + +A
Sbjct: 16 NIPTGVAHIQSTFNNTIVTIADTKGDVISWASAGSSGFKGAKKGTPFAAQTAADNAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM LEV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 IEQGMRQLEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|116671487|ref|YP_832420.1| 30S ribosomal protein S11 [Arthrobacter sp. FB24]
gi|152060573|sp|A0JZ50|RS11_ARTS2 RecName: Full=30S ribosomal protein S11
gi|116611596|gb|ABK04320.1| SSU ribosomal protein S11P [Arthrobacter sp. FB24]
Length = 133
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 94/126 (74%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +++KNI G+AH+ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAA
Sbjct: 8 AVRKPRKKDKKNIALGQAHIKSTFNNTIVSITDPNGAVISWASAGEVGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT AHNGCRP
Sbjct: 68 QMAAEAAAKRAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPAAHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 PKRRRV 133
>gi|116493138|ref|YP_804873.1| 30S ribosomal protein S11 [Pediococcus pentosaceus ATCC 25745]
gi|122265398|sp|Q03EE1|RS11_PEDPA RecName: Full=30S ribosomal protein S11
gi|116103288|gb|ABJ68431.1| SSU ribosomal protein S11P [Pediococcus pentosaceus ATCC 25745]
Length = 129
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI SG AH+ STFNNT + ITDP GN +AWSS +GF GSRK++P
Sbjct: 1 MATKKNTRKRRVKKNIESGVAHIHSTFNNTLVMITDPQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + A HGM ++EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKAAMEHGMKNVEVAVKGPGSGREAAIRALQATGLEVSAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|224179450|ref|YP_002600848.1| ribosomal protein S11 [Pycnococcus provasolii]
gi|217314493|gb|ACK36835.1| ribosomal protein S11 [Pycnococcus provasolii]
Length = 128
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RN R+ + G H+ ++FNNT + +TD +GN +AWSS GF G+++ +P
Sbjct: 1 MVKQVRKARN-VRRRLPRGVVHIYASFNNTIVNVTDSNGNVVAWSSAGACGFKGAKRGTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A K + GM +EV + G GAGRD+++RAL+A G I + D+T + HNG
Sbjct: 60 FAAQMAAQQVVQKCTDMGMKRIEVVLRGPGAGRDTSVRALQAGGLAITLLRDITALPHNG 119
Query: 121 CRPRKRRRI 129
CRP K RR+
Sbjct: 120 CRPPKNRRV 128
>gi|90994484|ref|YP_536974.1| ribosomal protein S11 [Porphyra yezoensis]
gi|122225819|sp|Q1XDJ4|RR11_PORYE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|90819048|dbj|BAE92417.1| 30S ribosomal protein S11 [Porphyra yezoensis]
gi|116266142|gb|ABJ91309.1| 30S ribosomal protein S11 [Porphyra yezoensis]
Length = 130
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + ++N V+G H+ STFNNT +TIT+ G T++WSS GF G++K +
Sbjct: 1 MARQIKKSGARKTKRNAVNGITHIKSTFNNTIVTITNLKGETLSWSSSGASGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM EV V+G GAGR++A+RAL+A G I I D+T + HN
Sbjct: 61 PFAAQTAAEKAARQAMDQGMRQTEVLVNGPGAGRETAIRALQAAGLEITLIKDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|113476556|ref|YP_722617.1| 30S ribosomal protein S11 [Trichodesmium erythraeum IMS101]
gi|123352123|sp|Q110D0|RS11_TRIEI RecName: Full=30S ribosomal protein S11
gi|110167604|gb|ABG52144.1| SSU ribosomal protein S11P [Trichodesmium erythraeum IMS101]
Length = 131
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/131 (45%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + P++ +++ N+ +G A++ STFNNT +TI D +G I+W+S GF G++K
Sbjct: 1 MARQPTKKTGPKKQKKNVPNGVAYIQSTFNNTIVTIADLNGEVISWASAGSSGFKGAKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + +A + GM ++V VSG GAGR++A+RAL+ G I I D+T I H
Sbjct: 61 TPFAAQTAAESAARRANDQGMRQVQVMVSGPGAGRETAIRALQGAGLEITLIRDITPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|284992848|ref|YP_003411402.1| 30S ribosomal protein S11 [Geodermatophilus obscurus DSM 43160]
gi|284066093|gb|ADB77031.1| 30S ribosomal protein S11 [Geodermatophilus obscurus DSM 43160]
Length = 135
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
+R +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAAQ+A
Sbjct: 14 VRRKEKKNVAHGAAHIKSTFNNTIVSITDPTGNVISWASAGHVGFKGSRKSTPFAAQMAA 73
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ + KAQ HGM ++V V G G+GR++A+R+L+A G + I DVT HNGCRP+KRR
Sbjct: 74 ENAARKAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGQIQDVTPQPHNGCRPKKRR 133
Query: 128 RI 129
R+
Sbjct: 134 RV 135
>gi|256847788|ref|ZP_05553233.1| 30S ribosomal protein S11 [Lactobacillus coleohominis 101-4-CHN]
gi|256715477|gb|EEU30453.1| 30S ribosomal protein S11 [Lactobacillus coleohominis 101-4-CHN]
Length = 128
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 64/115 (55%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT I ITD GN +AWSS V+GF GSRK++PFAAQ+A++ + +A
Sbjct: 14 NVETGVAHIHSTFNNTLIMITDVQGNAVAWSSAGVLGFKGSRKSTPFAAQMASEAAAKQA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++EV V G G+GR+SA+RAL+A G + +I DVT + HNG RP KRRR+
Sbjct: 74 MEHGMKTVEVAVKGPGSGRESAIRALQATGLEVTAIRDVTPVPHNGSRPPKRRRV 128
>gi|283794917|ref|YP_003359270.1| ribosomal protein S11 [Cryptomonas paramecium]
gi|253981889|gb|ACT46806.1| ribosomal protein S11 [Cryptomonas paramecium]
Length = 130
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/128 (49%), Positives = 83/128 (64%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ R++K G AHV STFNNT ITIT+ G+TIAWSS VGF G++K++PF
Sbjct: 3 AVTKRTSSKRDKKVHPKGVAHVQSTFNNTIITITNLLGDTIAWSSAGSVGFKGAKKSTPF 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AQVA ++ + + G+ +EV V G GAGR++A+RAL+ G I I DVT HNGC
Sbjct: 63 GAQVAAENAAKSVISKGLKEIEVFVDGPGAGREAAIRALKTTGLEIKLIHDVTSTPHNGC 122
Query: 122 RPRKRRRI 129
RP K+RRI
Sbjct: 123 RPPKKRRI 130
>gi|237786336|ref|YP_002907041.1| 30S ribosomal protein S11 [Corynebacterium kroppenstedtii DSM
44385]
gi|259494617|sp|C4LKZ3|RS11_CORK4 RecName: Full=30S ribosomal protein S11
gi|237759248|gb|ACR18498.1| 30S ribosomal protein S11 [Corynebacterium kroppenstedtii DSM
44385]
Length = 134
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/118 (53%), Positives = 88/118 (74%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ +G A++ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ+A + +
Sbjct: 17 VKKNVANGHAYIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQMAAESAA 76
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KAQ HG+ +EV V G G+GR++A+R+L+A G + SI DVT HNGCRP KRRR+
Sbjct: 77 RKAQEHGLKKVEVFVKGPGSGRETAIRSLQAAGLEVNSISDVTPQPHNGCRPPKRRRV 134
>gi|153805626|ref|YP_001382210.1| ribosomal protein S11 [Leptosira terrestris]
gi|171704567|sp|A6YGD3|RR11_LEPTE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134270157|gb|ABO69346.1| ribosomal protein S11 [Leptosira terrestris]
Length = 129
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 76/129 (58%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +I + ++ G H+ +FNNT +TIT+ G+ +AWSS GF G+RK +P
Sbjct: 1 MAKLTRKIPKKTKRKFSRGLVHIQVSFNNTIVTITNLKGDVLAWSSAGACGFKGARKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+ + + K+ + G+ +V V G G GRD AL L G I I D+T I HNG
Sbjct: 61 FAAQIVAETAARKSFDRGLKQAQVLVKGPGPGRDKALVGLFKAGIQISLIRDITAIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRL 129
>gi|256390171|ref|YP_003111735.1| 30S ribosomal protein S11 [Catenulispora acidiphila DSM 44928]
gi|256356397|gb|ACU69894.1| ribosomal protein S11 [Catenulispora acidiphila DSM 44928]
Length = 136
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 89/126 (70%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++R +E+KN+ G AH+ STFNNT ++ITDP GN IAW+S VGF GSRK++PFAA
Sbjct: 11 KAPKLRRKEKKNVAHGHAHIKSTFNNTIVSITDPQGNVIAWASSGQVGFKGSRKSTPFAA 70
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+ + + +A HGM ++V V G G+GR++A+R+L+ G + SI DVT HNGCRP
Sbjct: 71 QMTAEAAARRAMEHGMKKVDVFVKGPGSGRETAIRSLQQTGLEVGSINDVTPSPHNGCRP 130
Query: 124 RKRRRI 129
KRRR+
Sbjct: 131 PKRRRV 136
>gi|269796228|ref|YP_003315683.1| 30S ribosomal protein S11P [Sanguibacter keddieii DSM 10542]
gi|269098413|gb|ACZ22849.1| SSU ribosomal protein S11P [Sanguibacter keddieii DSM 10542]
Length = 135
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 94/128 (73%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+S + R +++KN+ G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PF
Sbjct: 8 AQSARKPRRKDKKNVAIGQAHIKSTFNNTIVSITDPTGAVISWASSGQVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGC
Sbjct: 68 AAQLAAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPQAHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|41410329|ref|NP_963165.1| 30S ribosomal protein S11 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118462594|ref|YP_883535.1| 30S ribosomal protein S11 [Mycobacterium avium 104]
gi|254776832|ref|ZP_05218348.1| 30S ribosomal protein S11 [Mycobacterium avium subsp. avium ATCC
25291]
gi|59798796|sp|Q73S45|RS11_MYCPA RecName: Full=30S ribosomal protein S11
gi|152060793|sp|A0QKU7|RS11_MYCA1 RecName: Full=30S ribosomal protein S11
gi|41399163|gb|AAS06781.1| RpsK [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163881|gb|ABK64778.1| ribosomal protein S11 [Mycobacterium avium 104]
Length = 138
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 91/124 (73%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PFAAQ+
Sbjct: 15 QKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPFAAQL 74
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG RP K
Sbjct: 75 AAENAARKAQEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPK 134
Query: 126 RRRI 129
RRR+
Sbjct: 135 RRRV 138
>gi|125975411|ref|YP_001039321.1| 30S ribosomal protein S11 [Clostridium thermocellum ATCC 27405]
gi|256005302|ref|ZP_05430268.1| ribosomal protein S11 [Clostridium thermocellum DSM 2360]
gi|281419373|ref|ZP_06250388.1| 30S ribosomal protein S11 [Clostridium thermocellum JW20]
gi|152060585|sp|A3DJJ9|RS11_CLOTH RecName: Full=30S ribosomal protein S11
gi|125715636|gb|ABN54128.1| SSU ribosomal protein S11P [Clostridium thermocellum ATCC 27405]
gi|255990738|gb|EEU00854.1| ribosomal protein S11 [Clostridium thermocellum DSM 2360]
gi|281406993|gb|EFB37256.1| 30S ribosomal protein S11 [Clostridium thermocellum JW20]
gi|316939527|gb|ADU73561.1| 30S ribosomal protein S11 [Clostridium thermocellum DSM 1313]
Length = 134
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 68/121 (56%), Positives = 89/121 (73%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +ERKNI G AH+ STFNNT +TITD GNTI+WSS +GF GSRK++PFAAQ+A +
Sbjct: 14 KRKERKNIERGAAHIRSTFNNTIVTITDVEGNTISWSSAGTLGFRGSRKSTPFAAQMAAE 73
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ A HG+ ++EV V G G+GR++A+RAL+A G + I DVT I HNGCRP KRRR
Sbjct: 74 AAAKAAMEHGLKTVEVYVKGPGSGREAAIRALQAAGLEVSLIKDVTPIPHNGCRPPKRRR 133
Query: 129 I 129
+
Sbjct: 134 V 134
>gi|326383230|ref|ZP_08204918.1| 30S ribosomal protein S11 [Gordonia neofelifaecis NRRL B-59395]
gi|326197980|gb|EGD55166.1| 30S ribosomal protein S11 [Gordonia neofelifaecis NRRL B-59395]
Length = 135
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
R R++KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 8 AGPKKGTRRRDKKNVPLGHAHIKSTFNNTIVSITDPEGNVISWASSGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ +G+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 68 AAQLAAENAARKAQENGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|302524020|ref|ZP_07276362.1| 30S ribosomal protein S11 [Streptomyces sp. AA4]
gi|302432915|gb|EFL04731.1| 30S ribosomal protein S11 [Streptomyces sp. AA4]
Length = 134
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 65/125 (52%), Positives = 91/125 (72%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +E+KN+ G AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PFAAQ
Sbjct: 10 AKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGAVIAWASSGHVGFKGSRKSTPFAAQ 69
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A ++ + KA HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP
Sbjct: 70 MAAENAARKAAEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPQPHNGCRPP 129
Query: 125 KRRRI 129
KRRR+
Sbjct: 130 KRRRV 134
>gi|148361032|ref|YP_001252239.1| hypothetical protein LPC_2992 [Legionella pneumophila str. Corby]
gi|166231818|sp|A5IHP3|RS11_LEGPC RecName: Full=30S ribosomal protein S11
gi|148282805|gb|ABQ56893.1| hypothetical protein LPC_2992 [Legionella pneumophila str. Corby]
Length = 132
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 80/127 (62%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ R + ++ + G H+ ++FNNT +T TD GN + W++ GF GSRK++P+A
Sbjct: 6 SKQQKTRKKVKRVVSDGIVHIHASFNNTIVTFTDRQGNALCWATSGGSGFRGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQVAT+ +A A+ +GM S+ V V G G GR+S +R L F IV I DVT I HNGC+
Sbjct: 66 AQVATERAAAVAKEYGMKSVAVFVHGPGPGRESTIRELITQDFKIVEITDVTGIPHNGCK 125
Query: 123 PRKRRRI 129
P +RR+
Sbjct: 126 PPIKRRV 132
>gi|288904298|ref|YP_003429519.1| ribosomal protein S11 [Streptococcus gallolyticus UCN34]
gi|306830327|ref|ZP_07463498.1| 30S ribosomal protein S11 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306832572|ref|ZP_07465712.1| 30S ribosomal protein S11 [Streptococcus bovis ATCC 700338]
gi|320548030|ref|ZP_08042310.1| 30S ribosomal protein S11 [Streptococcus equinus ATCC 9812]
gi|325977277|ref|YP_004286993.1| 30S ribosomal protein S11 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731023|emb|CBI12567.1| ribosomal protein S11 [Streptococcus gallolyticus UCN34]
gi|304425330|gb|EFM28456.1| 30S ribosomal protein S11 [Streptococcus bovis ATCC 700338]
gi|304427574|gb|EFM30675.1| 30S ribosomal protein S11 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|320447272|gb|EFW88035.1| 30S ribosomal protein S11 [Streptococcus equinus ATCC 9812]
gi|325177205|emb|CBZ47249.1| 30S ribosomal protein S11 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 127
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGVAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ ++EV V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|213964788|ref|ZP_03392987.1| 30S ribosomal protein S11 [Corynebacterium amycolatum SK46]
gi|213952324|gb|EEB63707.1| 30S ribosomal protein S11 [Corynebacterium amycolatum SK46]
Length = 134
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 62/117 (52%), Positives = 87/117 (74%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KN+ G A++ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+A ++ +
Sbjct: 18 KKNVAQGHAYIKSTFNNTIVSITDPKGAVISWASSGHVGFKGSRKSTPFAAQMAAENAAR 77
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA +HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP KRRR+
Sbjct: 78 KAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTPQPHNGCRPPKRRRV 134
>gi|313683417|ref|YP_004061155.1| SSU ribosomal protein s11p [Sulfuricurvum kujiense DSM 16994]
gi|313156277|gb|ADR34955.1| SSU ribosomal protein S11P [Sulfuricurvum kujiense DSM 16994]
Length = 130
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + +KNI G H++++FNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKATRKKIVKKNIARGIVHILASFNNTLVTVTDEMGNMIAWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A + KA HG+ + +KV G G+GR++A++++ AI G + + DVT + HN
Sbjct: 61 FAAQQAVESAMEKAMVHGIKEVGIKVQGPGSGRETAVKSVGAIEGLRVSFMKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRAPKRRRV 130
>gi|298386204|ref|ZP_06995761.1| 30S ribosomal protein S11 [Bacteroides sp. 1_1_14]
gi|298261432|gb|EFI04299.1| 30S ribosomal protein S11 [Bacteroides sp. 1_1_14]
Length = 117
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 51/116 (43%), Positives = 75/116 (64%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
K +G+ HV S+FNN +++ + G I+WSS +GF GS+KN+P+AAQ+A DC+
Sbjct: 2 KVDANGQLHVHSSFNNIIVSLANSEGQIISWSSAGKMGFRGSKKNTPYAAQMAAQDCAKI 61
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A + G+ ++ V G G GR+SA+R + G + I DVT + HNGCRP KRRR+
Sbjct: 62 AFDLGLRKVKAYVKGPGNGRESAIRTIHGAGIEVTEIIDVTPLPHNGCRPPKRRRV 117
>gi|268680563|ref|YP_003304994.1| 30S ribosomal protein S11 [Sulfurospirillum deleyianum DSM 6946]
gi|268618594|gb|ACZ12959.1| 30S ribosomal protein S11 [Sulfurospirillum deleyianum DSM 6946]
Length = 130
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVVRKKVVKKNIAKGIIYISATFNNTVVTVTDEMGNVIAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALR-ALRAIGFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++ A G + + D+T + HN
Sbjct: 61 YAAQQAVEDALTKAKEHGLKEVGIKVQGPGSGRETAVKSAGTTEGIKVSFLKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|217967394|ref|YP_002352900.1| ribosomal protein S11 [Dictyoglomus turgidum DSM 6724]
gi|226708362|sp|B8E1F8|RS11_DICTD RecName: Full=30S ribosomal protein S11
gi|217336493|gb|ACK42286.1| ribosomal protein S11 [Dictyoglomus turgidum DSM 6724]
Length = 131
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R +E++ + G AH+ STFNNT +TITDP GN + W S GF G++K +
Sbjct: 1 MAKKKRTRGPKKEKRIVPVGVAHINSTFNNTIVTITDPEGNVLTWGSGGTAGFKGTKKGT 60
Query: 60 PFAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
PFAAQ+A + + KA +GM ++V V G G GR++A+RAL+A G I I DVT I H
Sbjct: 61 PFAAQLAAEMAAKKAISEYGMKKVDVLVKGPGPGRETAIRALQAAGLEISLIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP +RRR+
Sbjct: 121 NGCRPPRRRRV 131
>gi|19745266|ref|NP_606402.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS8232]
gi|25010158|ref|NP_734553.1| 30S ribosomal protein S11 [Streptococcus agalactiae NEM316]
gi|28894979|ref|NP_801329.1| 30S ribosomal protein S11 [Streptococcus pyogenes SSI-1]
gi|50913464|ref|YP_059436.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS10394]
gi|71902734|ref|YP_279537.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS6180]
gi|94987700|ref|YP_595801.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS9429]
gi|94989581|ref|YP_597681.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS10270]
gi|94991569|ref|YP_599668.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS2096]
gi|94993469|ref|YP_601567.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS10750]
gi|139472952|ref|YP_001127667.1| 30S ribosomal protein S11 [Streptococcus pyogenes str. Manfredo]
gi|161485618|ref|NP_687119.2| 30S ribosomal protein S11 [Streptococcus agalactiae 2603V/R]
gi|161485756|ref|NP_663869.2| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS315]
gi|161486743|ref|YP_328808.2| 30S ribosomal protein S11 [Streptococcus agalactiae A909]
gi|195977233|ref|YP_002122477.1| 30S ribosomal protein S11 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|222152290|ref|YP_002561465.1| 30S ribosomal protein S11 [Streptococcus uberis 0140J]
gi|225867690|ref|YP_002743638.1| 30S ribosomal protein S11 [Streptococcus equi subsp. zooepidemicus]
gi|225869561|ref|YP_002745508.1| 30S ribosomal protein S11 [Streptococcus equi subsp. equi 4047]
gi|251781543|ref|YP_002995844.1| 30S ribosomal protein S11 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306828236|ref|ZP_07461496.1| 30S ribosomal protein S11 [Streptococcus pyogenes ATCC 10782]
gi|313889546|ref|ZP_07823191.1| 30S ribosomal protein S11 [Streptococcus pseudoporcinus SPIN 20026]
gi|329117662|ref|ZP_08246379.1| 30S ribosomal protein S11 [Streptococcus parauberis NCFD 2020]
gi|54039336|sp|P66362|RS11_STRP8 RecName: Full=30S ribosomal protein S11
gi|54039337|sp|P66363|RS11_STRA3 RecName: Full=30S ribosomal protein S11
gi|54039338|sp|P66364|RS11_STRA5 RecName: Full=30S ribosomal protein S11
gi|54042112|sp|P66361|RS11_STRP3 RecName: Full=30S ribosomal protein S11
gi|59798614|sp|Q5XEB0|RS11_STRP6 RecName: Full=30S ribosomal protein S11
gi|91207681|sp|Q3K3U5|RS11_STRA1 RecName: Full=30S ribosomal protein S11
gi|91207682|sp|Q48VS4|RS11_STRPM RecName: Full=30S ribosomal protein S11
gi|122986873|sp|Q1J8Y8|RS11_STRPF RecName: Full=30S ribosomal protein S11
gi|122987149|sp|Q1JNZ2|RS11_STRPC RecName: Full=30S ribosomal protein S11
gi|123382359|sp|Q1JE34|RS11_STRPB RecName: Full=30S ribosomal protein S11
gi|123382461|sp|Q1JJ36|RS11_STRPD RecName: Full=30S ribosomal protein S11
gi|152060824|sp|A2RC39|RS11_STRPG RecName: Full=30S ribosomal protein S11
gi|226708418|sp|B4U525|RS11_STREM RecName: Full=30S ribosomal protein S11
gi|254811044|sp|C0M7C6|RS11_STRE4 RecName: Full=30S ribosomal protein S11
gi|254811047|sp|B9DSX5|RS11_STRU0 RecName: Full=30S ribosomal protein S11
gi|259494635|sp|C0ME30|RS11_STRS7 RecName: Full=30S ribosomal protein S11
gi|19747361|gb|AAL96901.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS8232]
gi|23094509|emb|CAD45728.1| 30S ribosomal protein S11 [Streptococcus agalactiae NEM316]
gi|28810224|dbj|BAC63162.1| 30S ribosomal protein S11 [Streptococcus pyogenes SSI-1]
gi|50902538|gb|AAT86253.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS10394]
gi|71801829|gb|AAX71182.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS6180]
gi|94541208|gb|ABF31257.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS9429]
gi|94543089|gb|ABF33137.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS10270]
gi|94545077|gb|ABF35124.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS2096]
gi|94546977|gb|ABF37023.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS10750]
gi|134271198|emb|CAM29411.1| 30S ribosomal protein S11 [Streptococcus pyogenes str. Manfredo]
gi|195973938|gb|ACG61464.1| 30S ribosomal protein S11 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|222113101|emb|CAR40484.1| 30S ribosomal protein S11 [Streptococcus uberis 0140J]
gi|225698965|emb|CAW92013.1| 30S ribosomal protein S11 [Streptococcus equi subsp. equi 4047]
gi|225700966|emb|CAW97688.1| 30S ribosomal protein S11 [Streptococcus equi subsp. zooepidemicus]
gi|242390171|dbj|BAH80630.1| 30S ribosomal protein S11 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304429547|gb|EFM32596.1| 30S ribosomal protein S11 [Streptococcus pyogenes ATCC 10782]
gi|313122055|gb|EFR45149.1| 30S ribosomal protein S11 [Streptococcus pseudoporcinus SPIN 20026]
gi|319743970|gb|EFV96350.1| 30S ribosomal protein S11 [Streptococcus agalactiae ATCC 13813]
gi|322410883|gb|EFY01791.1| 30S ribosomal protein S11 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323126336|gb|ADX23633.1| 30S ribosomal protein S11 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|326908067|gb|EGE54981.1| 30S ribosomal protein S11 [Streptococcus parauberis NCFD 2020]
Length = 127
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|116495922|ref|YP_807656.1| 30S ribosomal protein S11 [Lactobacillus casei ATCC 334]
gi|191639404|ref|YP_001988570.1| 30S ribosomal protein S11 [Lactobacillus casei BL23]
gi|199598857|ref|ZP_03212268.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus HN001]
gi|227533984|ref|ZP_03964033.1| ribosomal protein S11 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229552732|ref|ZP_04441457.1| ribosomal protein S11 [Lactobacillus rhamnosus LMS2-1]
gi|239630327|ref|ZP_04673358.1| 30S ribosomal protein S11 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|258509457|ref|YP_003172208.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus GG]
gi|258540655|ref|YP_003175154.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus Lc 705]
gi|301067479|ref|YP_003789502.1| 30S ribosomal protein L11 [Lactobacillus casei str. Zhang]
gi|122262678|sp|Q035A8|RS11_LACC3 RecName: Full=30S ribosomal protein S11
gi|226708379|sp|B3WAJ3|RS11_LACCB RecName: Full=30S ribosomal protein S11
gi|116106072|gb|ABJ71214.1| SSU ribosomal protein S11P [Lactobacillus casei ATCC 334]
gi|190713706|emb|CAQ67712.1| 30S ribosomal protein S11 [Lactobacillus casei BL23]
gi|199590269|gb|EDY98364.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus HN001]
gi|227188361|gb|EEI68428.1| ribosomal protein S11 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229313938|gb|EEN79911.1| ribosomal protein S11 [Lactobacillus rhamnosus LMS2-1]
gi|239527939|gb|EEQ66940.1| 30S ribosomal protein S11 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|257149384|emb|CAR88357.1| SSU/30S ribosomal protein S11P [Lactobacillus rhamnosus GG]
gi|257152331|emb|CAR91303.1| SSU/30S ribosomal protein S11P [Lactobacillus rhamnosus Lc 705]
gi|259650736|dbj|BAI42898.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus GG]
gi|300439886|gb|ADK19652.1| Ribosomal protein S11 [Lactobacillus casei str. Zhang]
gi|327383492|gb|AEA54968.1| 30S ribosomal protein S11 [Lactobacillus casei LC2W]
gi|327386685|gb|AEA58159.1| 30S ribosomal protein S11 [Lactobacillus casei BD-II]
Length = 129
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R RKN+ SG AH+ STFNNT + ITDP GN IAWSS +GF GSRK++P
Sbjct: 1 MAGRKTTRKRRVRKNVESGVAHIHSTFNNTLVMITDPRGNAIAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + ++ HGM S+EV V G G+GR++A+R+L+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKESMEHGMKSVEVAVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|197303837|ref|ZP_03168873.1| hypothetical protein RUMLAC_02576 [Ruminococcus lactaris ATCC
29176]
gi|317501799|ref|ZP_07959985.1| ribosomal protein S11 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088680|ref|ZP_08337590.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 3_1_46FAA]
gi|197297130|gb|EDY31694.1| hypothetical protein RUMLAC_02576 [Ruminococcus lactaris ATCC
29176]
gi|316896832|gb|EFV18917.1| ribosomal protein S11 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407203|gb|EGG86706.1| 30S ribosomal protein S11 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 131
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 58/113 (51%), Positives = 84/113 (74%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 19 ERGQAHIQSSFNNTIVTLTDTQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAALV 78
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G +VSI DVT + HNGCRP KRRR+
Sbjct: 79 HGLKSVDVFVKGPGSGREAAIRALQACGIDVVSIKDVTPVPHNGCRPPKRRRV 131
>gi|281357931|ref|ZP_06244416.1| 30S ribosomal protein S11 [Victivallis vadensis ATCC BAA-548]
gi|281315589|gb|EFA99617.1| 30S ribosomal protein S11 [Victivallis vadensis ATCC BAA-548]
Length = 148
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
+ R + + + SG A+V++TFNNT++T TD HGN I WS+ GF GSRK++ +AAQV
Sbjct: 26 KQRGKTGRYVPSGIAYVLATFNNTKVTFTDLHGNVICWSTGGKNGFKGSRKSTAYAAQVI 85
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
D + KAQ GM +EV++ G GAGR+SA+R + A G I +I D+T + HNGCRP KR
Sbjct: 86 AGDAAKKAQLVGMKEVEVRIKGPGAGRESAVRGIAAAGMEISTIKDITPVPHNGCRPPKR 145
Query: 127 RRI 129
RR+
Sbjct: 146 RRV 148
>gi|120437151|ref|YP_862837.1| 30S ribosomal protein S11 [Gramella forsetii KT0803]
gi|152060592|sp|A0M575|RS11_GRAFK RecName: Full=30S ribosomal protein S11
gi|117579301|emb|CAL67770.1| 30S ribosomal protein S11 [Gramella forsetii KT0803]
Length = 133
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
Query: 1 MPKSPS-RIRNRERKNIV---SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K + + + ++++ +V +G AHV ++FNN I++T+ G+ +AWSS +GF GS+
Sbjct: 1 MAKKANPKAKTQKKRKVVVESNGEAHVTASFNNIIISLTNKKGDVVAWSSAGKMGFRGSK 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
KN+P+AAQ+A +D S A GM ++V V G G GR+SA+RA+ G + I D+T +
Sbjct: 61 KNTPYAAQLAAEDASKVAHEAGMRKVKVYVKGPGNGRESAIRAVHNSGIEVTEIIDITPL 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 PHNGCRPPKRRRV 133
>gi|209558652|ref|YP_002285124.1| 30S ribosomal protein S11 [Streptococcus pyogenes NZ131]
gi|226708425|sp|B5XJ61|RS11_STRPZ RecName: Full=30S ribosomal protein S11
gi|209539853|gb|ACI60429.1| SSU ribosomal protein S11p (S14e) [Streptococcus pyogenes NZ131]
Length = 127
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI G AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIEFGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|311896537|dbj|BAJ28945.1| putative ribosomal protein S11 [Kitasatospora setae KM-6054]
Length = 135
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/128 (52%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+IR +E+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PF
Sbjct: 8 AAGAKKIRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGC
Sbjct: 68 AAQMAAEAAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPTPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|34558006|ref|NP_907821.1| 30S ribosomal protein S11 [Wolinella succinogenes DSM 1740]
gi|59798810|sp|Q7M8F5|RS11_WOLSU RecName: Full=30S ribosomal protein S11
gi|34483724|emb|CAE10721.1| 30S RIBOSOMAL PROTEIN S11 [Wolinella succinogenes]
Length = 131
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRE-RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R +KNI G H+ +TFNNT +TITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRKVTNKKRVVKKNIARGIIHIAATFNNTSVTITDEMGNVICWSTAGALGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A +D KA+ HG+ L +KV G G+GR++A+++L +I G ++ DVT + H
Sbjct: 61 PYAAQQAVEDAVVKAKEHGIKELGIKVQGPGSGRETAVKSLGSIEGIKVLWFKDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|294101655|ref|YP_003553513.1| 30S ribosomal protein S11 [Aminobacterium colombiense DSM 12261]
gi|293616635|gb|ADE56789.1| 30S ribosomal protein S11 [Aminobacterium colombiense DSM 12261]
Length = 130
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R + RE+KN+ G AH+ STFNNT ++ITD GN ++W+S VGF G+RK++
Sbjct: 1 MAKRTQRRGKKREKKNVNYGVAHIFSTFNNTIVSITDKGGNILSWASGGNVGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A + AQ+HG+ ++V V G G GR+SA+R+L+A G + I D T I HN
Sbjct: 61 PFAAQIAAQQAAKTAQDHGVKEIDVIVKGPGPGRESAIRSLQAAGLQVNMIKDATPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|228016584|gb|ACP51414.1| ribosomal protein S11 [Abies firma]
gi|228017405|gb|ACP52222.1| ribosomal protein S11 [Larix occidentalis]
Length = 130
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G HV ++FNNT +T+TD G ++WSS GF G+R+ +
Sbjct: 1 MSKTTRRIGSRRNEHRVLKGVIHVQASFNNTIVTVTDVRGQVLSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|283782778|ref|YP_003373532.1| 30S ribosomal protein S11 [Gardnerella vaginalis 409-05]
gi|297242945|ref|ZP_06926883.1| ribosomal protein S11 [Gardnerella vaginalis AMD]
gi|308235470|ref|ZP_07666207.1| 30S ribosomal protein S11 [Gardnerella vaginalis ATCC 14018]
gi|311115143|ref|YP_003986364.1| 30S ribosomal protein S11 [Gardnerella vaginalis ATCC 14019]
gi|283441833|gb|ADB14299.1| 30S ribosomal protein S11 [Gardnerella vaginalis 409-05]
gi|296889156|gb|EFH27890.1| ribosomal protein S11 [Gardnerella vaginalis AMD]
gi|310946637|gb|ADP39341.1| 30S ribosomal protein S11 [Gardnerella vaginalis ATCC 14019]
Length = 132
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QASRKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVLSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGLKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|119029439|gb|ABL59936.1| ribosomal protein S11 [uncultured bacterium]
Length = 134
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ R +++K G H+ +TFNNT+ITITD GN IAWSS GF GSRK++PFAA
Sbjct: 8 KSTQSRKKDKKYYSDGIVHIKATFNNTKITITDTQGNVIAWSSSAKAGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
QVA D+ + + G+ ++V V+G G+GR+SA+RAL G + I DVT I HNGCR
Sbjct: 68 QVAADEVAKDCIDRFGLKKVQVWVNGPGSGRESAVRALSGAGLRVSEIKDVTGIPHNGCR 127
Query: 123 PRKRRRI 129
K+RR+
Sbjct: 128 DPKKRRV 134
>gi|11465760|ref|NP_053904.1| ribosomal protein S11 [Porphyra purpurea]
gi|1710690|sp|P51294|RR11_PORPU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|1276760|gb|AAC08180.1| 30S ribosomal protein S11 [Porphyra purpurea]
Length = 130
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + + N V+G H+ STFNNT +TIT+ G T++WSS GF G++K +
Sbjct: 1 MARQIKKSGARKNKHNAVNGITHIKSTFNNTIVTITNLKGETLSWSSSGASGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM EV V+G GAGR++A+RAL+A G I I D+T + HN
Sbjct: 61 PFAAQTAAEKAAKQAMDQGMRQTEVLVNGPGAGRETAIRALQAAGLEITLIKDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|27808056|dbj|BAC55479.1| ribosomal protein S11 [Anthoceros formosae]
Length = 130
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS +I + ++ I G H+ ++FNNT IT+TD G ++WS GF G++K++
Sbjct: 1 MAKSIRKINLRKGKRRIPRGVTHIQASFNNTIITVTDVRGXVVSWSXAGACGFKGTKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM EV +SG G GRD+ALRA+R G + + DVT I HN
Sbjct: 61 PFAAQTAAENAIRILIDQGMKXAEVMISGPGPGRDTALRAIRRSGVVLSYVRDVTPIXHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|312866503|ref|ZP_07726720.1| 30S ribosomal protein S11 [Streptococcus downei F0415]
gi|311097934|gb|EFQ56161.1| 30S ribosomal protein S11 [Streptococcus downei F0415]
Length = 127
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ+HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQDHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|293364323|ref|ZP_06611049.1| 30S ribosomal protein S11 [Streptococcus oralis ATCC 35037]
gi|298502048|ref|YP_003723988.1| 30S ribosomal protein S11 [Streptococcus pneumoniae TCH8431/19A]
gi|291317169|gb|EFE57596.1| 30S ribosomal protein S11 [Streptococcus oralis ATCC 35037]
gi|298237643|gb|ADI68774.1| 30S ribosomal protein S11 [Streptococcus pneumoniae TCH8431/19A]
Length = 118
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 67/117 (57%), Positives = 87/117 (74%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++PFAAQ+A++ +
Sbjct: 2 KKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFAAQMASEAAAK 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
AQ HG+ S+EV V G G+GR+SA+RAL A G + +I DVT + HNG RP KRRR+
Sbjct: 62 SAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV 118
>gi|259047530|ref|ZP_05737931.1| 30S ribosomal protein S11 [Granulicatella adiacens ATCC 49175]
gi|260584441|ref|ZP_05852188.1| 30S ribosomal protein S11 [Granulicatella elegans ATCC 700633]
gi|259035721|gb|EEW36976.1| 30S ribosomal protein S11 [Granulicatella adiacens ATCC 49175]
gi|260157959|gb|EEW93028.1| 30S ribosomal protein S11 [Granulicatella elegans ATCC 700633]
Length = 128
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG AH+ STFNNT + ITD HGN ++WSS +GF GS+K++PFAAQ+A + + +
Sbjct: 14 NIESGVAHIRSTFNNTIVMITDVHGNAVSWSSAGALGFKGSKKSTPFAAQMAAESAAKGS 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++EV V G G+GR++A+R+L+A G + +I DVT I HNGCRP KRRR+
Sbjct: 74 MEHGMKTVEVSVKGPGSGREAAIRSLQATGLEVTAIRDVTPIPHNGCRPPKRRRV 128
>gi|72163018|ref|YP_290675.1| 30S ribosomal protein S11 [Thermobifida fusca YX]
gi|91207683|sp|Q47LM0|RS11_THEFY RecName: Full=30S ribosomal protein S11
gi|71916750|gb|AAZ56652.1| SSU ribosomal protein S11P [Thermobifida fusca YX]
Length = 134
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 65/124 (52%), Positives = 93/124 (75%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
++R +E+KN+V G AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RKVRRKEKKNVVHGHAHIKSTFNNTIVSITDPTGAVISWASAGQVGFKGSRKSTPFAAQM 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT + HNGCRP K
Sbjct: 71 AAEAAARRAQEHGVRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPVPHNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|218440646|ref|YP_002378975.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 7424]
gi|226708355|sp|B7KI10|RS11_CYAP7 RecName: Full=30S ribosomal protein S11
gi|218173374|gb|ACK72107.1| ribosomal protein S11 [Cyanothece sp. PCC 7424]
Length = 130
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT +TI D G+ I+W+S GF G++K +PFAAQ A D+ + +A
Sbjct: 16 NVPNGIAHIQSTFNNTIVTIADTRGDVISWASAGSSGFKGAKKGTPFAAQTAADNAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 MEQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|270291109|ref|ZP_06197332.1| 30S ribosomal protein S11 [Pediococcus acidilactici 7_4]
gi|304385389|ref|ZP_07367734.1| 30S ribosomal protein S11 [Pediococcus acidilactici DSM 20284]
gi|270280505|gb|EFA26340.1| 30S ribosomal protein S11 [Pediococcus acidilactici 7_4]
gi|304328596|gb|EFL95817.1| 30S ribosomal protein S11 [Pediococcus acidilactici DSM 20284]
Length = 129
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI SG AH+ STFNNT + ITDP GN +AWSS +GF GSRK++P
Sbjct: 1 MATKRNTRKRRVKKNIESGVAHIHSTFNNTLVMITDPQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + A HGM ++EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMASEAAAKAAMEHGMKNVEVAVKGPGSGREAAIRALQATGLEVSAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|184200288|ref|YP_001854495.1| 30S ribosomal protein S11 [Kocuria rhizophila DC2201]
gi|254765387|sp|B2GJ19|RS11_KOCRD RecName: Full=30S ribosomal protein S11
gi|183580518|dbj|BAG28989.1| 30S ribosomal protein S11 [Kocuria rhizophila DC2201]
Length = 134
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 89/128 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R + KN+ G+AH+ STFNNT ++ITDP G ++W+S +GF GSRK++PF
Sbjct: 7 ATAARKPRRKVNKNVTQGQAHIKSTFNNTIVSITDPSGAVLSWASAGGMGFKGSRKSTPF 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + + AQ HGM ++V V G G+GR++A+RAL+A G + SI DVT AHNGC
Sbjct: 67 AAQQAAEAAAKGAQEHGMRKVDVFVKGPGSGRETAIRALQATGLEVGSIQDVTPSAHNGC 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPPKRRRV 134
>gi|126658012|ref|ZP_01729164.1| 30S ribosomal protein S11 [Cyanothece sp. CCY0110]
gi|126620650|gb|EAZ91367.1| 30S ribosomal protein S11 [Cyanothece sp. CCY0110]
Length = 130
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT ITI+D G+ I+WSS GF G++K +PFAAQ A D + +A
Sbjct: 16 NVPNGVAHIQSTFNNTIITISDTRGDVISWSSAGASGFKGAKKGTPFAAQTAADSAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 IDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|18311360|ref|NP_563294.1| 30S ribosomal protein S11 [Clostridium perfringens str. 13]
gi|110800360|ref|YP_697067.1| 30S ribosomal protein S11 [Clostridium perfringens ATCC 13124]
gi|110803629|ref|YP_699636.1| 30S ribosomal protein S11 [Clostridium perfringens SM101]
gi|168205207|ref|ZP_02631212.1| ribosomal protein S11 [Clostridium perfringens E str. JGS1987]
gi|168211878|ref|ZP_02637503.1| ribosomal protein S11 [Clostridium perfringens B str. ATCC 3626]
gi|168215203|ref|ZP_02640828.1| ribosomal protein S11 [Clostridium perfringens CPE str. F4969]
gi|168216658|ref|ZP_02642283.1| ribosomal protein S11 [Clostridium perfringens NCTC 8239]
gi|169347127|ref|ZP_02866069.1| ribosomal protein S11 [Clostridium perfringens C str. JGS1495]
gi|182626918|ref|ZP_02954651.1| ribosomal protein S11 [Clostridium perfringens D str. JGS1721]
gi|48474565|sp|Q8XHU9|RS11_CLOPE RecName: Full=30S ribosomal protein S11
gi|123047167|sp|Q0SQH1|RS11_CLOPS RecName: Full=30S ribosomal protein S11
gi|123344493|sp|Q0TMS3|RS11_CLOP1 RecName: Full=30S ribosomal protein S11
gi|18146044|dbj|BAB82084.1| 30S ribosomal protein S11 [Clostridium perfringens str. 13]
gi|110675007|gb|ABG83994.1| 30S ribosomal protein S11 [Clostridium perfringens ATCC 13124]
gi|110684130|gb|ABG87500.1| 30S ribosomal protein S11 [Clostridium perfringens SM101]
gi|169296810|gb|EDS78939.1| ribosomal protein S11 [Clostridium perfringens C str. JGS1495]
gi|170663301|gb|EDT15984.1| ribosomal protein S11 [Clostridium perfringens E str. JGS1987]
gi|170710170|gb|EDT22352.1| ribosomal protein S11 [Clostridium perfringens B str. ATCC 3626]
gi|170713395|gb|EDT25577.1| ribosomal protein S11 [Clostridium perfringens CPE str. F4969]
gi|177907708|gb|EDT70323.1| ribosomal protein S11 [Clostridium perfringens D str. JGS1721]
gi|182381155|gb|EDT78634.1| ribosomal protein S11 [Clostridium perfringens NCTC 8239]
Length = 131
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD GN +AW+S +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NVEHGAAHIQSTFNNSIVTLTDAKGNALAWASAGGLGFKGSRKSTPFAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSVEVYVKGPGAGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 131
>gi|255994832|ref|ZP_05427967.1| 30S ribosomal protein S11 [Eubacterium saphenum ATCC 49989]
gi|255993545|gb|EEU03634.1| 30S ribosomal protein S11 [Eubacterium saphenum ATCC 49989]
Length = 128
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/116 (50%), Positives = 83/116 (71%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
++I G AH+ S+FNNT +T+TD +GN I+WSS +GF GSRK++P+AAQ+A + +
Sbjct: 13 RHIERGHAHIQSSFNNTLVTLTDTNGNAISWSSAGSLGFKGSRKSTPYAAQMAAETAAKA 72
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A + G+ +EV V G GAGR++A+RAL+ G I I D+T I HNGCRP KRRR+
Sbjct: 73 AADQGLRFVEVFVKGPGAGREAAIRALQTAGLEITMIKDITPIPHNGCRPPKRRRV 128
>gi|320352937|ref|YP_004194276.1| 30S ribosomal protein S11P [Desulfobulbus propionicus DSM 2032]
gi|320121439|gb|ADW16985.1| SSU ribosomal protein S11P [Desulfobulbus propionicus DSM 2032]
Length = 132
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G + STFNNT +TI+D GN ++WSS V+GF GSRK++PFAAQ A +D KA
Sbjct: 18 NVTEGIIFIYSTFNNTVVTISDRQGNALSWSSAGVLGFKGSRKSTPFAAQNALNDAVLKA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ HG+ +EV+V G G GR++ALRAL + + I DVT + HNGC+P KRRR+
Sbjct: 78 KEHGLRKVEVRVKGPGPGREAALRALTTVDLDVSRIVDVTPLPHNGCKPPKRRRV 132
>gi|227903212|ref|ZP_04021017.1| ribosomal protein S11 [Lactobacillus acidophilus ATCC 4796]
gi|227869017|gb|EEJ76438.1| ribosomal protein S11 [Lactobacillus acidophilus ATCC 4796]
Length = 129
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MPAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR+SA+R+L+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAMDQGMKRVEVSVKGPGAGRESAIRSLQATGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|75764944|ref|ZP_00744282.1| SSU ribosomal protein S11P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487568|gb|EAO51446.1| SSU ribosomal protein S11P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 118
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 65/117 (55%), Positives = 88/117 (75%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KNI +G AH+ STFNNT +T+TD HGN ++WSS +GF GSRK++PFAAQ+A + +
Sbjct: 2 KKNIEAGIAHIRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTPFAAQMAAEAAAK 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A HG+ +LEV V G GAGR++A+RAL+A G + +I DVT + HNGCRP KRRR+
Sbjct: 62 VAMEHGLKTLEVTVKGPGAGREAAIRALQAAGLEVTAIRDVTPVPHNGCRPPKRRRV 118
>gi|220913401|ref|YP_002488710.1| 30S ribosomal protein S11 [Arthrobacter chlorophenolicus A6]
gi|325964133|ref|YP_004242039.1| 30S ribosomal protein S11P [Arthrobacter phenanthrenivorans Sphe3]
gi|254765362|sp|B8HCX5|RS11_ARTCA RecName: Full=30S ribosomal protein S11
gi|219860279|gb|ACL40621.1| ribosomal protein S11 [Arthrobacter chlorophenolicus A6]
gi|323470220|gb|ADX73905.1| SSU ribosomal protein S11P [Arthrobacter phenanthrenivorans Sphe3]
Length = 133
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +++KNI G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 8 AVRKPRKKDKKNIALGQAHIKSTFNNTIVSITDPTGAVISWASSGEVGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGCRP
Sbjct: 68 QMAAEAAAKRAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPAAHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 PKRRRV 133
>gi|32423694|gb|AAP81237.1| ribosomal protein S11 [Candidatus Portiera aleyrodidarum]
Length = 130
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 58/115 (50%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
I++ AH+ ++FNNT +TITD +GNT+AW++ GF GSRK++PFAAQ A+D + A
Sbjct: 16 EIINAVAHINASFNNTIVTITDKNGNTLAWATSGGAGFKGSRKSTPFAAQTASDRVAKSA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++V V G G GR+SA+RAL + G + SI D T I HNGCRP KRRR+
Sbjct: 76 AECGVKYIDVIVKGPGPGRESAVRALNSHGINVKSITDATPIPHNGCRPPKRRRV 130
>gi|119025364|ref|YP_909209.1| 30S ribosomal protein S11 [Bifidobacterium adolescentis ATCC 15703]
gi|154486772|ref|ZP_02028179.1| hypothetical protein BIFADO_00597 [Bifidobacterium adolescentis
L2-32]
gi|212716587|ref|ZP_03324715.1| hypothetical protein BIFCAT_01516 [Bifidobacterium catenulatum DSM
16992]
gi|225351020|ref|ZP_03742043.1| hypothetical protein BIFPSEUDO_02602 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|152060577|sp|A1A094|RS11_BIFAA RecName: Full=30S ribosomal protein S11
gi|118764948|dbj|BAF39127.1| 30S ribosomal protein S11 [Bifidobacterium adolescentis ATCC 15703]
gi|154084635|gb|EDN83680.1| hypothetical protein BIFADO_00597 [Bifidobacterium adolescentis
L2-32]
gi|212660291|gb|EEB20866.1| hypothetical protein BIFCAT_01516 [Bifidobacterium catenulatum DSM
16992]
gi|225158476|gb|EEG71718.1| hypothetical protein BIFPSEUDO_02602 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 132
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGLKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|324999250|ref|ZP_08120362.1| 30S ribosomal protein S11 [Pseudonocardia sp. P1]
Length = 135
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 66/125 (52%), Positives = 90/125 (72%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
P ++R RE+KN+ G AH+ STFNNT ++ITDP G IAW+S VG GSRK++PFAAQ
Sbjct: 11 PKKVRRREKKNVAHGHAHIKSTFNNTIVSITDPTGAVIAWASSGHVGLKGSRKSTPFAAQ 70
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A ++ + KA HGM +V V G G+GR++A+R+L+A G + +I DVT HNGCRP
Sbjct: 71 LAAENAARKAMEHGMKKCDVFVKGPGSGRETAIRSLQAAGLEVGTINDVTPQPHNGCRPP 130
Query: 125 KRRRI 129
KRRR+
Sbjct: 131 KRRRV 135
>gi|296875380|ref|ZP_06899454.1| 30S ribosomal protein S11 [Streptococcus parasanguinis ATCC 15912]
gi|312866976|ref|ZP_07727187.1| 30S ribosomal protein S11 [Streptococcus parasanguinis F0405]
gi|322390684|ref|ZP_08064198.1| 30S ribosomal protein S11 [Streptococcus parasanguinis ATCC 903]
gi|296433573|gb|EFH19346.1| 30S ribosomal protein S11 [Streptococcus parasanguinis ATCC 15912]
gi|311097458|gb|EFQ55691.1| 30S ribosomal protein S11 [Streptococcus parasanguinis F0405]
gi|321142657|gb|EFX38121.1| 30S ribosomal protein S11 [Streptococcus parasanguinis ATCC 903]
Length = 127
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ S+EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKAAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|218245117|ref|YP_002370488.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 8801]
gi|257058142|ref|YP_003136030.1| 30S ribosomal protein S11 [Cyanothece sp. PCC 8802]
gi|226708356|sp|B7K225|RS11_CYAP8 RecName: Full=30S ribosomal protein S11
gi|218165595|gb|ACK64332.1| ribosomal protein S11 [Cyanothece sp. PCC 8801]
gi|256588308|gb|ACU99194.1| ribosomal protein S11 [Cyanothece sp. PCC 8802]
Length = 130
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 80/115 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT +TI D G+ ++W+S GF G++K +PFAAQ A D + +A
Sbjct: 16 NVPNGIAHIQSTFNNTIVTIADTKGDVVSWASAGSSGFKGAKKGTPFAAQTAADAAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 IDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|88803726|ref|ZP_01119250.1| 30S ribosomal protein S11 [Polaribacter irgensii 23-P]
gi|88780459|gb|EAR11640.1| 30S ribosomal protein S11 [Polaribacter irgensii 23-P]
Length = 127
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ S+ R + G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKASSKKRKVIIDAV--GEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DCSA A+ G+ ++V V G G GR+SA+R++ G + I DVT I HNG
Sbjct: 59 YAAQLAAEDCSAVAKEAGLRKVKVYVKGPGNGRESAIRSIHNAGIEVTEIIDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|46579738|ref|YP_010546.1| 30S ribosomal protein S11 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602785|ref|YP_967185.1| 30S ribosomal protein S11 [Desulfovibrio vulgaris DP4]
gi|59798763|sp|Q72CF6|RS11_DESVH RecName: Full=30S ribosomal protein S11
gi|152060587|sp|A1VE92|RS11_DESVV RecName: Full=30S ribosomal protein S11
gi|46449153|gb|AAS95805.1| ribosomal protein S11 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563014|gb|ABM28758.1| SSU ribosomal protein S11P [Desulfovibrio vulgaris DP4]
gi|311233529|gb|ADP86383.1| 30S ribosomal protein S11 [Desulfovibrio vulgaris RCH1]
Length = 129
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ RE+KN+ G AH+ +TFNNT +T TD GNTI+W+S GF GSRK++P
Sbjct: 1 MARPKRTVKKREKKNVPVGLAHIQATFNNTIVTFTDTRGNTISWASAGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + KAQ +GM ++ + V G G+GR++A+RA+ A GF + I D+T I HNG
Sbjct: 61 FAAQMAAEQAAKKAQENGMRTVGIYVKGPGSGREAAMRAINAAGFKVAFIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|331702055|ref|YP_004399014.1| 30S ribosomal protein S11 [Lactobacillus buchneri NRRL B-30929]
gi|329129398|gb|AEB73951.1| 30S ribosomal protein S11 [Lactobacillus buchneri NRRL B-30929]
Length = 129
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +KNI +G AH+ STFNNT + ITD GN ++WSS +GF GSRK++P
Sbjct: 1 MVNKKTSRKRRAKKNIAAGVAHIHSTFNNTLVMITDTTGNAVSWSSAGALGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM S+EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKSVEVAVKGPGSGREAAIRALQATGLEVTAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|110004253|emb|CAK98591.1| 30s ribosomal protein s11 [Spiroplasma citri]
Length = 129
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 60/128 (46%), Positives = 87/128 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +KN++ G AH+ STFNNT +T++D GN I+W+S +GF GS+K++P
Sbjct: 1 MAVRKKTNKKKVKKNVLKGIAHIHSTFNNTIVTLSDEAGNVISWASAGAMGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ + +Q HGMSS++V+V G G GRD+A+R+++ IG I SI DVT I HNG
Sbjct: 61 YAAQMVAEAAGKASQEHGMSSVQVEVKGPGPGRDAAVRSIQTIGLEITSIKDVTPIPHNG 120
Query: 121 CRPRKRRR 128
RP KR R
Sbjct: 121 ARPPKRPR 128
>gi|15674312|ref|NP_268485.1| 30S ribosomal protein S11 [Streptococcus pyogenes M1 GAS]
gi|71909883|ref|YP_281433.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS5005]
gi|48474623|sp|Q9A1V0|RS11_STRP1 RecName: Full=30S ribosomal protein S11
gi|13621393|gb|AAK33207.1| 30S ribosomal protein S11 [Streptococcus pyogenes M1 GAS]
gi|71852665|gb|AAZ50688.1| SSU ribosomal protein S11P [Streptococcus pyogenes MGAS5005]
Length = 127
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +K+I SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKDIESGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|28377857|ref|NP_784749.1| 30S ribosomal protein S11 [Lactobacillus plantarum WCFS1]
gi|254556042|ref|YP_003062459.1| 30S ribosomal protein S11 [Lactobacillus plantarum JDM1]
gi|300767845|ref|ZP_07077755.1| 30S ribosomal protein S11 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180035|ref|YP_003924163.1| 30S ribosomal protein S11 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|32171608|sp|Q88XW1|RS11_LACPL RecName: Full=30S ribosomal protein S11
gi|28270690|emb|CAD63596.1| ribosomal protein S11 [Lactobacillus plantarum WCFS1]
gi|254044969|gb|ACT61762.1| 30S ribosomal protein S11 [Lactobacillus plantarum JDM1]
gi|300494830|gb|EFK29988.1| 30S ribosomal protein S11 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045526|gb|ADN98069.1| 30S ribosomal protein S11 [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 129
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R +KNI SG AH+ STFNNT + ITD GN IAWSS +GF GSRK++P
Sbjct: 1 MATRKTTRRRRVKKNIESGVAHIHSTFNNTLVMITDMQGNAIAWSSAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + + HGM ++EV V G G+GR++A+RAL+A G + +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKASMEHGMKTVEVAVKGPGSGREAAIRALQATGLEVSAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 121 SRPPKRRRV 129
>gi|18860344|ref|NP_569661.1| ribosomal protein S11 [Psilotum nudum]
gi|48474906|sp|Q8WHZ0|RR11_PSINU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|18389497|dbj|BAB84249.1| ribosomal protein S11 [Psilotum nudum]
Length = 130
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRN-RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
MPK R+ + ++++ I G + ++FNNT +T+T+ G I WSS GF G+++++
Sbjct: 1 MPKPIKRLSSHKKKRVIFKGIIQIKASFNNTIVTVTNSQGQVITWSSAGACGFKGTKRST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+AT++ + GM EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQIATENAIRTLISQGMKQAEVMISGPGPGRDTALRTIRKSGLVLHFVRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|260061921|ref|YP_003195001.1| 30S ribosomal protein S11 [Robiginitalea biformata HTCC2501]
gi|88786054|gb|EAR17223.1| 30S ribosomal protein S11 [Robiginitalea biformata HTCC2501]
Length = 136
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 81/128 (63%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+ + R+ +G AH+ ++FNN I++T+ G+ I+W+S +GF GS+KN+P+
Sbjct: 9 AKAAKSTKKRKVAVESTGEAHITASFNNIIISLTNKKGDVISWASAGKMGFRGSKKNTPY 68
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQVA ++C A G+ ++V V G G GR+SA+R + G + I DVT + HNGC
Sbjct: 69 AAQVAAEECVKTAHEAGLRKVKVYVKGPGNGRESAIRTIHNNGIEVTEIIDVTPLPHNGC 128
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 129 RPPKRRRV 136
>gi|119358166|ref|YP_912810.1| 30S ribosomal protein S11 [Chlorobium phaeobacteroides DSM 266]
gi|152060584|sp|A1BJ09|RS11_CHLPD RecName: Full=30S ribosomal protein S11
gi|119355515|gb|ABL66386.1| SSU ribosomal protein S11P [Chlorobium phaeobacteroides DSM 266]
Length = 127
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ ++FNN +TITD GNT++WSS GF GS+KN+P+A+Q+ ++ + +A +
Sbjct: 15 PEGTVHIKASFNNIMVTITDVLGNTVSWSSAGKNGFKGSKKNTPYASQITSEAAAKEAFD 74
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM + V + G GAGRD+A+RAL+ G + SI D+T + HNGCRP KRRR+
Sbjct: 75 LGMRHVNVLIKGPGAGRDAAIRALQGAGLEVRSIKDITPLPHNGCRPPKRRRV 127
>gi|108773280|ref|YP_635781.1| ribosomal protein S11 [Chara vulgaris]
gi|122224964|sp|Q1ACG6|RR11_CHAVU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|77157936|gb|ABA61977.1| ribosomal protein S11 [Chara vulgaris]
Length = 130
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +I + +K G H+ ++FNNT +TITD G I+WSS GF G++K++
Sbjct: 1 MIRPIKKITLRKTKKKSPKGVIHIQASFNNTIVTITDLRGQVISWSSSGACGFKGAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ+AT++ + + EV +SG G GR++ALRA+R + I DVT I HN
Sbjct: 61 AYAAQIATENAIKQWTDQNTKQAEVMMSGPGPGRETALRAIRNSRVILSFIRDVTPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|309322374|ref|YP_003934454.1| ribosomal protein S11 [Cathaya argyrophylla]
gi|307683300|dbj|BAJ19607.1| ribosomal protein S11 [Cathaya argyrophylla]
Length = 130
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G +V ++FNNT +T+TD G ++WSS GF G+R+ +
Sbjct: 1 MSKTTKRIGSRRNEHRVLKGVIYVQASFNNTIVTVTDVRGQVLSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|206901394|ref|YP_002250726.1| ribosomal protein S11 [Dictyoglomus thermophilum H-6-12]
gi|226708361|sp|B5YDW8|RS11_DICT6 RecName: Full=30S ribosomal protein S11
gi|206740497|gb|ACI19555.1| ribosomal protein S11 [Dictyoglomus thermophilum H-6-12]
Length = 131
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K +R RE++ + G AH+ STFNNT +TITDP GN + W S GF G++K +
Sbjct: 1 MAKKKRTRGPKREKRIVPVGVAHINSTFNNTIVTITDPEGNVLTWGSGGTAGFKGTKKGT 60
Query: 60 PFAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
PFAAQ+A + + KA +GM ++V V G G GR++A+RAL+A G I I DVT I H
Sbjct: 61 PFAAQLAAEMAAKKAISEYGMKKVDVLVKGPGPGRETAIRALQAAGLEISLIKDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP +RRR+
Sbjct: 121 NGCRPPRRRRV 131
>gi|34849416|gb|AAP58915.1| ribosomal protein S11 [Spiroplasma kunkelii CR2-3x]
Length = 129
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 59/110 (53%), Positives = 80/110 (72%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G AHV STFNNT +T++D GN I+W+S +GF GS+K++P+AAQ+ + +Q HG
Sbjct: 19 GIAHVHSTFNNTIVTLSDEAGNVISWASAGAMGFKGSKKSTPYAAQMVAEAAGKASQEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
MSS++V+V G G GRD+A+R+++AIG I SI DVT I HNG RP KR R
Sbjct: 79 MSSVQVEVKGPGPGRDAAVRSIQAIGLEITSIKDVTPIPHNGARPPKRPR 128
>gi|221632953|ref|YP_002522176.1| 30S ribosomal protein S11 [Thermomicrobium roseum DSM 5159]
gi|254811053|sp|B9KZW2|RS11_THERP RecName: Full=30S ribosomal protein S11
gi|221155413|gb|ACM04540.1| ribosomal protein S11 [Thermomicrobium roseum DSM 5159]
Length = 137
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 66/117 (56%), Positives = 88/117 (75%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
ERKNI GRA++ +TFNNT +T+TDP+GN +AWSS GF G+RK++P+AAQVA ++ +
Sbjct: 20 ERKNIPRGRAYIHATFNNTIVTLTDPNGNVVAWSSAGSSGFKGTRKSTPYAAQVAAENAA 79
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA HGM ++V V G GAGR+ A+RAL A G ++SI D+T + HNGCRP KRRR
Sbjct: 80 RKAMEHGMRQVDVYVKGAGAGREMAIRALAAAGLQVMSITDITPVPHNGCRPPKRRR 136
>gi|229825291|ref|ZP_04451360.1| hypothetical protein GCWU000182_00645 [Abiotrophia defectiva ATCC
49176]
gi|229790663|gb|EEP26777.1| hypothetical protein GCWU000182_00645 [Abiotrophia defectiva ATCC
49176]
Length = 133
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 58/113 (51%), Positives = 82/113 (72%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ S+FNNT +T+TD GN ++W+S +GF GS+K++P+AAQ+A + + A
Sbjct: 21 ERGQAHIQSSFNNTIVTLTDSEGNALSWASAGGLGFRGSKKSTPYAAQMAAETAAKAAVV 80
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 81 HGLKSVEVMVKGPGAGREAAIRALEACGIQVTSIKDVTPVPHNGCRPPKRRRV 133
>gi|329945756|ref|ZP_08293443.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328528204|gb|EGF55182.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 133
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
MP + R ++RKN+ G A++ STFNNT +++TDP G IAW S VGF GSR
Sbjct: 1 MPPKTRAAARKTRRKDRKNVTHGHAYIKSTFNNTIVSLTDPQGAVIAWCSSGQVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 KSTPYAAQLAAESAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSITDVTPQ 120
Query: 117 AHNGCRPRKRRRI 129
A NGCRP KRRR+
Sbjct: 121 AFNGCRPPKRRRV 133
>gi|240167781|ref|ZP_04746440.1| 30S ribosomal protein S11 [Mycobacterium kansasii ATCC 12478]
Length = 142
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 67/127 (52%), Positives = 92/127 (72%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ + R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PFA
Sbjct: 16 QKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPFA 75
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG R
Sbjct: 76 AQLAAENAARKAQEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGVR 135
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 136 PPKRRRV 142
>gi|11467737|ref|NP_050789.1| ribosomal protein S11 [Guillardia theta]
gi|3914831|sp|O46913|RR11_GUITH RecName: Full=30S ribosomal protein S11, chloroplastic
gi|3603062|gb|AAC35723.1| ribosomal protein S11 [Guillardia theta]
Length = 130
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 79/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G H+ STFNNT +T++ G+T+AW+S +GF G++K +PFAAQ+A + + +A +
Sbjct: 18 ANGVVHIQSTFNNTIVTLSTLEGDTVAWASSGAIGFKGAKKGTPFAAQIAAEKATKEAIS 77
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV ++G G+GR++A+RAL+A G I I D+T + HNGCRP K+ R+
Sbjct: 78 QGMKKAEVLINGPGSGRETAIRALQAAGLEITLIRDITPVPHNGCRPPKKLRV 130
>gi|237688486|ref|YP_002905105.1| ribosomal protein S11 [Picea sitchensis]
gi|226875314|gb|ACO89053.1| ribosomal protein S11 [Picea sitchensis]
gi|307683673|dbj|BAJ19815.1| ribosomal protein S11 [Picea morrisonicola]
Length = 130
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G +V ++FNNT +T+TD G + WSS GF G+R+ +
Sbjct: 1 MSKTKRRIGSRRNENRVLKGVIYVQASFNNTIVTVTDVRGQVLCWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|153004798|ref|YP_001379123.1| 30S ribosomal protein S11 [Anaeromyxobacter sp. Fw109-5]
gi|152028371|gb|ABS26139.1| ribosomal protein S11 [Anaeromyxobacter sp. Fw109-5]
Length = 159
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 70/115 (60%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ STFNNT ITI D GN I+WSS GF GSRK++PFAAQVA D +AKA
Sbjct: 45 NIATGIVHIASTFNNTMITICDASGNVISWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 104
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCRP KRRR+
Sbjct: 105 MEHGLKTVSVVVKGPGAGRESALRALSAAGLKITLIRDVTPIPHNGCRPPKRRRV 159
>gi|58336654|ref|YP_193239.1| 30S ribosomal protein S11 [Lactobacillus acidophilus NCFM]
gi|75358064|sp|Q5FM66|RS11_LACAC RecName: Full=30S ribosomal protein S11
gi|58253971|gb|AAV42208.1| 30S ribosomal protein S11 [Lactobacillus acidophilus NCFM]
Length = 130
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 88/128 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 2 MPAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 61
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR+SA+R+L+A G I +I DVT + HNG
Sbjct: 62 FAAQMAAEAAAKSAMDQGMKHVEVSVKGPGAGRESAIRSLQATGLEITAIRDVTPVPHNG 121
Query: 121 CRPRKRRR 128
RP KRRR
Sbjct: 122 SRPPKRRR 129
>gi|328949254|ref|YP_004366591.1| 30S ribosomal protein S11 [Treponema succinifaciens DSM 2489]
gi|328449578|gb|AEB15294.1| 30S ribosomal protein S11 [Treponema succinifaciens DSM 2489]
Length = 127
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +E+K++ G ++ +TFNNT +TITD GN IAW+S +GF G++K++P
Sbjct: 1 MATTVK--KRKEKKSVFEGNIYIQATFNNTIVTITDLRGNAIAWASSGGLGFRGAKKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ + +A ++G+ + V V G G GR++A+R L +G + SI D+T I HNG
Sbjct: 59 FAAQSVAETAVQRAASYGLREVHVFVKGPGMGRENAIRVLGTLGLKVKSISDITPIPHNG 118
Query: 121 CRPRKRRR 128
CRPRK RR
Sbjct: 119 CRPRKTRR 126
>gi|322378756|ref|ZP_08053185.1| 30S ribosomal protein S11 [Helicobacter suis HS1]
gi|322380605|ref|ZP_08054757.1| 30S ribosomal protein S11 [Helicobacter suis HS5]
gi|321146927|gb|EFX41675.1| 30S ribosomal protein S11 [Helicobacter suis HS5]
gi|321148786|gb|EFX43257.1| 30S ribosomal protein S11 [Helicobacter suis HS1]
Length = 130
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ ++FNNT IT+TD GN I WS+ +GF GS+K++P
Sbjct: 1 MAKRAGVKKKVVKKNIARGVVYIAASFNNTNITVTDEMGNVICWSTAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A ++ KA++HG+ + +KV G G+GR++A++ + +I G ++ I D+T + HN
Sbjct: 61 YAAQQAVENAMMKAKDHGIKEVGIKVQGPGSGRETAIKGVGSIEGIKVLWIKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|315655842|ref|ZP_07908740.1| 30S ribosomal protein S11 [Mobiluncus curtisii ATCC 51333]
gi|315489906|gb|EFU79533.1| 30S ribosomal protein S11 [Mobiluncus curtisii ATCC 51333]
Length = 131
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MP--KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M ++ R +ERKN+ G A++ STFNNT ++ITDP G +AWSS VGF GSRK+
Sbjct: 1 MAGKSQATKSRRKERKNVTEGNAYIKSTFNNTIVSITDPSGAVLAWSSSGQVGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + + +AQ G+ ++V V G G+GR++A+R L A G + SI DVT AH
Sbjct: 61 TPFAAQLAAEAAARRAQEFGLKKVDVFVKGPGSGRETAIRTLTATGLEVGSIQDVTPQAH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|193214824|ref|YP_001996023.1| 30S ribosomal protein S11 [Chloroherpeton thalassium ATCC 35110]
gi|226708346|sp|B3QYE8|RS11_CHLT3 RecName: Full=30S ribosomal protein S11
gi|193088301|gb|ACF13576.1| ribosomal protein S11 [Chloroherpeton thalassium ATCC 35110]
Length = 128
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 79/112 (70%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G H+ +TFNN +TITD GNT++WS+ GF GS+KN+P+A+QV + + +A +
Sbjct: 17 DGIVHIKATFNNIAVTITDVTGNTVSWSTAGKNGFKGSKKNTPYASQVTAESAAKEAYDL 76
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++V++ G G+GRD+A+R+L+ G + +I D+T + HNGCRP KRRR+
Sbjct: 77 GMRKVDVRIKGPGSGRDAAIRSLQNAGLEVKTISDITPLPHNGCRPPKRRRV 128
>gi|302337500|ref|YP_003802706.1| 30S ribosomal protein S11 [Spirochaeta smaragdinae DSM 11293]
gi|301634685|gb|ADK80112.1| 30S ribosomal protein S11 [Spirochaeta smaragdinae DSM 11293]
Length = 127
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R +K + G ++ +TFNNT +T+TD GNT++W+S +GF G++K++P
Sbjct: 1 MAKASG--KKRTKKTVYEGNVYIQATFNNTIVTVTDLQGNTVSWASAGGLGFRGAKKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ + + KA ++G+ + V V G G GR+SA+R+L +G ++ SI DVT I HNG
Sbjct: 59 YAAQTTAETAAKKAMDYGLREVNVFVKGPGVGRESAIRSLGNLGLSVRSIRDVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRPRK RR+
Sbjct: 119 CRPRKSRRV 127
>gi|255321748|ref|ZP_05362903.1| 30S ribosomal protein S11 [Campylobacter showae RM3277]
gi|255301228|gb|EET80490.1| 30S ribosomal protein S11 [Campylobacter showae RM3277]
Length = 130
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RK+I G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVVKKKIVRKSIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ A+ G + + D+T + HN
Sbjct: 61 YAAQQAVEDALTKAKEHGIKEVGIKVQGPGSGRETAVKSVGAVEGIKVTFLKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|284033973|ref|YP_003383904.1| 30S ribosomal protein S11 [Kribbella flavida DSM 17836]
gi|283813266|gb|ADB35105.1| ribosomal protein S11 [Kribbella flavida DSM 17836]
Length = 135
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++R +E+KN+ +G AH+ STFNNT +TITDP G I+W+S VGF GSRK++PF
Sbjct: 8 AAGAKKVRRKEKKNVAAGHAHIKSTFNNTIVTITDPTGAVISWASAGTVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + +A HGM ++V V G G+GR++A+R+L A+G + +I DVT AHNGC
Sbjct: 68 AAQMAAEAAGRRAMEHGMRKIDVFVKGPGSGRETAIRSLGAVGLEVGTIQDVTPTAHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|114329780|ref|YP_740598.1| ribosomal protein S11 [Platanus occidentalis]
gi|122166005|sp|Q09G13|RR11_PLAOC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|114054418|gb|ABI49812.1| ribosomal protein S11 [Platanus occidentalis]
Length = 138
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIQRIGSRRNGPIGSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGACG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|262203542|ref|YP_003274750.1| 30S ribosomal protein S11 [Gordonia bronchialis DSM 43247]
gi|262086889|gb|ACY22857.1| 30S ribosomal protein S11 [Gordonia bronchialis DSM 43247]
Length = 135
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
R R++KN+ G AH+ STFNNT ++I+DP+GN I+W+S VGF GSRK++PF
Sbjct: 8 AGPKKGARRRDKKNVPHGTAHIKSTFNNTIVSISDPNGNVISWASSGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 68 AAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|223038534|ref|ZP_03608828.1| 30S ribosomal protein S11 [Campylobacter rectus RM3267]
gi|222880391|gb|EEF15478.1| 30S ribosomal protein S11 [Campylobacter rectus RM3267]
Length = 130
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RK+I G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVVKKKIVRKSIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D AKA+ HG+ + +KV G G+GR++A++++ A+ G + + D+T + HN
Sbjct: 61 YAAQQAVEDALAKAKEHGIKEVGIKVQGPGSGRETAVKSVGAVEGIKVTFLKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|222084118|ref|YP_002519570.1| ribosomal protein S11 [Keteleeria davidiana]
gi|220983670|dbj|BAH11436.1| ribosomal protein S11 [Keteleeria davidiana]
Length = 130
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +I R ++ G +V ++FNNT +T+TD G +WSS GF G+R+ +
Sbjct: 1 MSKTTRKIGSRRNEHRVLKGVIYVQASFNNTIVTVTDVRGQVFSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|197122364|ref|YP_002134315.1| 30S ribosomal protein S11 [Anaeromyxobacter sp. K]
gi|220917146|ref|YP_002492450.1| ribosomal protein S11 [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172213|gb|ACG73186.1| ribosomal protein S11 [Anaeromyxobacter sp. K]
gi|219955000|gb|ACL65384.1| ribosomal protein S11 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 163
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/115 (62%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ STFNNT+ITITD GN IAWSS GF GSRK++PFAAQVA D +AKA
Sbjct: 49 NIAAGIVHIASTFNNTQITITDVTGNVIAWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 108
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCRP KRRR+
Sbjct: 109 MEHGLKTVSVVVKGPGAGRESALRALSAAGLKITLIRDVTPIPHNGCRPPKRRRV 163
>gi|149371653|ref|ZP_01891069.1| 30S ribosomal protein S11 [unidentified eubacterium SCB49]
gi|149355280|gb|EDM43840.1| 30S ribosomal protein S11 [unidentified eubacterium SCB49]
Length = 132
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/132 (41%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRIRNRERKNI---VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ + ++ +++ + G AH+ ++FNN +++T+ G+ I+WSS +GF GS+K
Sbjct: 1 MAKANPKAKSTKKRKVNVESVGAAHITASFNNIIVSLTNKAGDVISWSSAGKMGFRGSKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
N+P+AAQ+A++DC+ A GM +V V G G GR+SA+RA+ +G + I DVT +
Sbjct: 61 NTPYAAQLASEDCAKVAHEAGMRKCKVYVKGPGNGRESAIRAIHNMGIEVTEIIDVTPMP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPAKRRRV 132
>gi|220930991|ref|YP_002507899.1| ribosomal protein S11 [Halothermothrix orenii H 168]
gi|219992301|gb|ACL68904.1| ribosomal protein S11 [Halothermothrix orenii H 168]
Length = 132
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 65/115 (56%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G+AH+ STFNNT +TITD GN IAWSS VG+ GSRK++PFAAQ+A +D + +A
Sbjct: 18 NIEKGQAHIKSTFNNTVVTITDKEGNVIAWSSGGKVGYKGSRKSTPFAAQLAAEDAAKQA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ G+ +E+ V G G+GR+SA+R+L+A G + I DVT I HNGCRP KRRRI
Sbjct: 78 MDQGLKEVEIYVKGPGSGRESAIRSLQATGLNVSIIKDVTPIPHNGCRPPKRRRI 132
>gi|124024018|ref|YP_001018325.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9303]
gi|152060807|sp|A2CC50|RS11_PROM3 RecName: Full=30S ribosomal protein S11
gi|123964304|gb|ABM79060.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9303]
Length = 130
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 59/116 (50%), Positives = 78/116 (67%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ +G AH+ STFNNT ++ITD G IAWSS GF G+RK +PFAAQ A + + +
Sbjct: 15 RNVPNGVAHIQSTFNNTIVSITDTAGEVIAWSSAGASGFKGARKGTPFAAQTAAEAAARR 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A GM +EV V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 75 ALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|284929583|ref|YP_003422105.1| 30S ribosomal protein S11P [cyanobacterium UCYN-A]
gi|284810027|gb|ADB95724.1| SSU ribosomal protein S11P [cyanobacterium UCYN-A]
Length = 130
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT +TI+D G+ I+WSS GF G++K +PFAAQ A D + +A
Sbjct: 16 NVPNGVAHIKSTFNNTIVTISDTKGDVISWSSAGASGFKGAKKGTPFAAQTAADSAARRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 76 IDNGMRQIEVMVSGPGAGRETAIRALQGSGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|225544156|ref|YP_002720145.1| rps11 [Jatropha curcas]
gi|224979597|gb|ACN72724.1| rps11 [Jatropha curcas]
Length = 138
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPLPRIGSRRNGRVGSRKNARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVMDQGMQQAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
D+T + HNGCRP K+RR+
Sbjct: 121 DITPMPHNGCRPPKKRRV 138
>gi|302036691|ref|YP_003797013.1| 30S ribosomal protein S11 [Candidatus Nitrospira defluvii]
gi|300604755|emb|CBK41087.1| 30S ribosomal protein S11 [Candidatus Nitrospira defluvii]
Length = 127
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 82/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ SG AHV ++FNNT +TITD GNT+ W+S GF GSRK++PFAAQ A + + KA
Sbjct: 14 VQSGVAHVQASFNNTIVTITDMSGNTVVWASSGNQGFKGSRKSTPFAAQRAGEAAARKAM 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+GM ++V V+G GAGR+SA+R+L++ G I I DVT I HNGCRP KRRR+
Sbjct: 74 ENGMRQVDVYVNGPGAGRESAIRSLQSAGLRINLIRDVTPIPHNGCRPPKRRRV 127
>gi|218885211|ref|YP_002434532.1| 30S ribosomal protein S11 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226708360|sp|B8DNK7|RS11_DESVM RecName: Full=30S ribosomal protein S11
gi|218756165|gb|ACL07064.1| ribosomal protein S11 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 129
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 91/129 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ +E+KN+ G H+ +TFNNT +T TD GNTI+W+S GF GSRK++P
Sbjct: 1 MARPKRTVKKKEKKNVPVGIVHIQATFNNTIVTFTDTRGNTISWASAGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + +AQ+HGM ++ + V G G+GR++A+RA+ A GF + I D+T I HNG
Sbjct: 61 FAAQVAAEQAAKRAQDHGMRTVGIYVKGPGSGREAAMRAVNAAGFKVAFIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|34541516|ref|NP_905995.1| 30S ribosomal protein S11 [Porphyromonas gingivalis W83]
gi|188995707|ref|YP_001929959.1| 30S ribosomal protein S11 [Porphyromonas gingivalis ATCC 33277]
gi|59798818|sp|Q7MTN8|RS11_PORGI RecName: Full=30S ribosomal protein S11
gi|226708399|sp|B2RLW7|RS11_PORG3 RecName: Full=30S ribosomal protein S11
gi|34397833|gb|AAQ66894.1| ribosomal protein S11 [Porphyromonas gingivalis W83]
gi|188595387|dbj|BAG34362.1| 30S ribosomal protein S11 [Porphyromonas gingivalis ATCC 33277]
Length = 128
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 75/116 (64%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ G+AH+ S+FNN I++ + G I+WSS +GF S+KN+P+AAQ+A DC+
Sbjct: 13 RVEAVGQAHIHSSFNNIIISLANSEGQVISWSSAGKMGFRSSKKNTPYAAQMAAQDCAKV 72
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A + G+ + V V G G GR+SA+R + G ++ I DVT + HNGCRP K+RR+
Sbjct: 73 AYDMGLRKVTVYVKGPGNGRESAIRTIHGAGIEVMEIIDVTPMPHNGCRPPKKRRV 128
>gi|224178089|ref|YP_002600907.1| ribosomal protein S11 [Pyramimonas parkeae]
gi|215882756|gb|ACJ71129.1| ribosomal protein S11 [Pyramimonas parkeae]
Length = 130
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +I + ++ + G H+ +TFNNT +TITD G +AWSS GF G+RK +
Sbjct: 1 MARQIKKIVTRKVKRKVTKGVVHIQATFNNTIVTITDMKGGVLAWSSAGACGFKGARKAT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + ++ + GM +E+ V+G G+GR++A+RA++A G I I D+T + HN
Sbjct: 61 PFAAQTAAEQAARQSMDQGMRHVEIMVTGPGSGRETAIRAIQATGLGITLIRDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|295425628|ref|ZP_06818315.1| 30S ribosomal protein S11 [Lactobacillus amylolyticus DSM 11664]
gi|295064644|gb|EFG55565.1| 30S ribosomal protein S11 [Lactobacillus amylolyticus DSM 11664]
Length = 127
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MPK+ + R +K++ SG AH+ STFNNT + ITD GN IAWSS +GF GSRK++P
Sbjct: 1 MPKTAR--KRRVKKHVESGVAHIQSTFNNTLVMITDVQGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR+SA+R+L+A G I +I DVT + HNG
Sbjct: 59 FAAQMAAEAAAKSAMDQGMKRVEVSVKGPGAGRESAIRSLQATGLEITAIRDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 SRPPKRRRV 127
>gi|225621050|ref|YP_002722308.1| 30S ribosomal protein S11 [Brachyspira hyodysenteriae WA1]
gi|296126889|ref|YP_003634141.1| 30S ribosomal protein S11 [Brachyspira murdochii DSM 12563]
gi|225215870|gb|ACN84604.1| 30S ribosomal protein S11 [Brachyspira hyodysenteriae WA1]
gi|296018705|gb|ADG71942.1| 30S ribosomal protein S11 [Brachyspira murdochii DSM 12563]
Length = 136
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/114 (49%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQ 75
G H+ ++FNNT +TITD +G+T++W+S + G + S+K++PFAAQVA++ S KA
Sbjct: 23 AFGIVHIKASFNNTIVTITDRNGDTLSWASAGLDGDYKSSKKSTPFAAQVASEKASKKAY 82
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +EV V G G GR+S++RA+ A G + I DVT + HNGCRPRKRRRI
Sbjct: 83 EMGVREVEVYVKGPGMGRESSIRAVEASGLKVKLIKDVTPMPHNGCRPRKRRRI 136
>gi|110227112|ref|YP_665591.1| ribosomal protein S11 [Populus alba]
gi|134093234|ref|YP_001109535.1| ribosomal protein S11 [Populus trichocarpa]
gi|224165841|ref|XP_002338862.1| predicted protein [Populus trichocarpa]
gi|122224625|sp|Q14FC4|RR11_POPAL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060525|sp|A4GYU4|RR11_POPTR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|109945550|dbj|BAE97238.1| ribosomal protein S11 [Populus alba]
gi|133712096|gb|ABO36739.1| ribosomal protein S11 [Populus trichocarpa]
gi|222873718|gb|EEF10849.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNGRISSRKNARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGACGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|84494746|ref|ZP_00993865.1| 30S ribosomal protein S11 [Janibacter sp. HTCC2649]
gi|84384239|gb|EAQ00119.1| 30S ribosomal protein S11 [Janibacter sp. HTCC2649]
Length = 134
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 89/125 (71%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
++R +++KN+ G+AH+ STFNNT I+ITDP G IAW+S VGF GSRK++PFAAQ
Sbjct: 10 AKKVRRKDKKNVPVGQAHIKSTFNNTIISITDPTGAVIAWASAGQVGFKGSRKSTPFAAQ 69
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
A + + +A +HG+ ++V V G G+GR++A+R+L A G + SI DVT HNG RP
Sbjct: 70 TAAEAAARRAMDHGVRKVDVFVKGPGSGRETAIRSLTAAGLEVGSIQDVTPSPHNGVRPP 129
Query: 125 KRRRI 129
KRRR+
Sbjct: 130 KRRRV 134
>gi|254517497|ref|ZP_05129553.1| ribosomal protein S11 [Clostridium sp. 7_2_43FAA]
gi|226911246|gb|EEH96447.1| ribosomal protein S11 [Clostridium sp. 7_2_43FAA]
Length = 130
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 16 NVEHGAAHIKSTFNNSIVTLTDAAGNALSWSSAGALGFRGSRKSTPFAAQMAAETAAKAA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 76 MEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 130
>gi|86141164|ref|ZP_01059710.1| 30S ribosomal protein S11 [Leeuwenhoekiella blandensis MED217]
gi|85831723|gb|EAQ50178.1| 30S ribosomal protein S11 [Leeuwenhoekiella blandensis MED217]
Length = 140
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 11/140 (7%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV 49
M K ++ + K G AH+ ++FNN I++T+ G+ ++WSS
Sbjct: 1 MAKQNTKGGGKSGKAAKTTKKRKVIVESVGEAHIAASFNNILISLTNKKGDVVSWSSAGK 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
+GF GS+KN+P+AAQ+A +D S A G+ ++V V G G GR+SA+R++ G +
Sbjct: 61 MGFRGSKKNTPYAAQLAAEDASKVAHEAGLRKVKVYVKGPGNGRESAIRSIHNSGIEVTE 120
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCRP KRRR+
Sbjct: 121 IIDVTPLPHNGCRPPKRRRV 140
>gi|303328070|ref|ZP_07358509.1| 30S ribosomal protein S11 [Desulfovibrio sp. 3_1_syn3]
gi|302861896|gb|EFL84831.1| 30S ribosomal protein S11 [Desulfovibrio sp. 3_1_syn3]
Length = 129
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ +E+KN+ G AH+ ++FNNT IT TD GN ++W+S GF GSRK++P
Sbjct: 1 MARPKKAVKKKEKKNVPVGIAHIQASFNNTIITFTDTRGNAVSWASSGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + KAQ++GM ++ V V G G+GR++A+RA+ A+GF + I DVT I HNG
Sbjct: 61 FAAQVAAETAARKAQDNGMRTVGVYVKGPGSGREAAMRAIAAVGFRVAFIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|31794635|ref|NP_857128.1| 30S ribosomal protein S11 [Mycobacterium bovis AF2122/97]
gi|121639379|ref|YP_979603.1| 30S ribosomal protein S11 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991875|ref|YP_002646564.1| 30S ribosomal protein S11 [Mycobacterium bovis BCG str. Tokyo 172]
gi|260188514|ref|ZP_05765988.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis CPHL_A]
gi|260206830|ref|ZP_05774321.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis K85]
gi|289449163|ref|ZP_06438907.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis CPHL_A]
gi|289576195|ref|ZP_06456422.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis K85]
gi|38605716|sp|P45812|RS11_MYCBO RecName: Full=30S ribosomal protein S11
gi|152060794|sp|A1KPE5|RS11_MYCBP RecName: Full=30S ribosomal protein S11
gi|254811034|sp|C1AHR7|RS11_MYCBT RecName: Full=30S ribosomal protein S11
gi|31620232|emb|CAD95675.1| PROBABLE 30S RIBOSOMAL PROTEIN S11 RPSK [Mycobacterium bovis
AF2122/97]
gi|121495027|emb|CAL73513.1| Probable 30S ribosomal protein S11 rpsK [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224774990|dbj|BAH27796.1| 30S ribosomal protein S11 [Mycobacterium bovis BCG str. Tokyo 172]
gi|289422121|gb|EFD19322.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis CPHL_A]
gi|289540626|gb|EFD45204.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis K85]
Length = 139
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 92/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R RE+KN+ G AH+ STFNNT +TITDP GN IAW+S VGF GSRK++PF
Sbjct: 12 ARKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSRKSTPF 71
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A ++ + KAQ+HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNG
Sbjct: 72 AAQLAAENAARKAQDHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQPHNGV 131
Query: 122 RPRKRRRI 129
RP RRR+
Sbjct: 132 RPPNRRRV 139
>gi|182418819|ref|ZP_02950084.1| ribosomal protein S11 [Clostridium butyricum 5521]
gi|237666387|ref|ZP_04526372.1| 30S ribosomal protein S11 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377316|gb|EDT74877.1| ribosomal protein S11 [Clostridium butyricum 5521]
gi|237657586|gb|EEP55141.1| 30S ribosomal protein S11 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 131
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +T+TD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NVEHGAAHIKSTFNNSIVTLTDAVGNALSWSSAGALGFRGSRKSTPFAAQMAAETAAKAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 131
>gi|182412028|ref|YP_001817094.1| ribosomal protein S11 [Opitutus terrae PB90-1]
gi|177839242|gb|ACB73494.1| ribosomal protein S11 [Opitutus terrae PB90-1]
Length = 126
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 85/121 (70%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ + KN+ SG A+V+++FNNT ++ITD G I+WSS F GSRK++ +AAQ+
Sbjct: 6 KAKGSKNVTSGVANVLASFNNTIVSITDQQGRVISWSSAGKCNFRGSRKSTAYAAQIVAQ 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
D + A HG+ + +++SG G GRDSA+RAL+A+G I SI DVT I HNGCRPRKRRR
Sbjct: 66 DAARNAMAHGLKDIVIRISGPGLGRDSAVRALQAVGLEITSIIDVTPIPHNGCRPRKRRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|309389908|gb|ADO77788.1| SSU ribosomal protein S11P [Halanaerobium praevalens DSM 2228]
Length = 131
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/114 (53%), Positives = 82/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G+AH+ STFNNT I+ITD G IAWSS VG+ GSRK++PFAAQ+A ++ + +A+
Sbjct: 18 IEKGQAHIKSTFNNTIISITDEEGKVIAWSSAGKVGYKGSRKSTPFAAQLAAENAADEAK 77
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +E+ V G G+GR+SA+R L++ G I I D+T I HNGCRP KRRRI
Sbjct: 78 EMGLKEVEIFVKGPGSGRESAIRTLQSAGLNITLIKDITPIPHNGCRPPKRRRI 131
>gi|298345436|ref|YP_003718123.1| 30S ribosomal protein S11 [Mobiluncus curtisii ATCC 43063]
gi|304390992|ref|ZP_07372944.1| 30S ribosomal protein S11 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315656232|ref|ZP_07909123.1| 30S ribosomal protein S11 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235497|gb|ADI66629.1| 30S ribosomal protein S11 [Mobiluncus curtisii ATCC 43063]
gi|304325875|gb|EFL93121.1| 30S ribosomal protein S11 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315493234|gb|EFU82834.1| 30S ribosomal protein S11 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 131
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 1 MP--KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M ++ R +ER+N+ G A++ STFNNT ++ITDP G +AWSS VGF GSRK+
Sbjct: 1 MAGKSQATKSRRKERRNVTEGNAYIKSTFNNTIVSITDPSGAVLAWSSSGQVGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+A + + +AQ G+ ++V V G G+GR++A+R L A G + SI DVT AH
Sbjct: 61 TPFAAQLAAEAAARRAQEFGLKKVDVFVKGPGSGRETAIRTLTATGLEVGSIQDVTPQAH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|171778400|ref|ZP_02919579.1| hypothetical protein STRINF_00430 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282931|gb|EDT48355.1| hypothetical protein STRINF_00430 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 118
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/117 (56%), Positives = 86/117 (73%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KNI SG AH+ +TFNNT + ITD HGN I+WSS +GF GSRK++PFAAQ+A + +
Sbjct: 2 KKNIESGVAHIHATFNNTIVMITDVHGNAISWSSAGALGFKGSRKSTPFAAQMAAEAAAK 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
AQ HG+ ++EV V G G+GR+SA+RAL A G + SI DVT + HNG RP KRRR+
Sbjct: 62 SAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHNGARPPKRRRV 118
>gi|152964683|ref|YP_001360467.1| 30S ribosomal protein S11 [Kineococcus radiotolerans SRS30216]
gi|189040419|sp|A6W5W4|RS11_KINRD RecName: Full=30S ribosomal protein S11
gi|151359200|gb|ABS02203.1| ribosomal protein S11 [Kineococcus radiotolerans SRS30216]
Length = 135
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R +E+KN+ G AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PF
Sbjct: 8 ATASRKPRRKEKKNVAHGHAHIKSTFNNTIVSITDPTGAVIAWASAGQVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGC
Sbjct: 68 AAQMAAEAAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGAIQDVTPSPHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|227876168|ref|ZP_03994284.1| ribosomal protein S11 [Mobiluncus mulieris ATCC 35243]
gi|269976925|ref|ZP_06183899.1| 30S ribosomal protein S11 [Mobiluncus mulieris 28-1]
gi|306819443|ref|ZP_07453150.1| 30S ribosomal protein S11 [Mobiluncus mulieris ATCC 35239]
gi|307701702|ref|ZP_07638718.1| 30S ribosomal protein S11 [Mobiluncus mulieris FB024-16]
gi|227843129|gb|EEJ53322.1| ribosomal protein S11 [Mobiluncus mulieris ATCC 35243]
gi|269934756|gb|EEZ91316.1| 30S ribosomal protein S11 [Mobiluncus mulieris 28-1]
gi|304647735|gb|EFM45053.1| 30S ribosomal protein S11 [Mobiluncus mulieris ATCC 35239]
gi|307613205|gb|EFN92458.1| 30S ribosomal protein S11 [Mobiluncus mulieris FB024-16]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K+ S+ R +ERKN+ G A++ STFNNT ++ITDP G IA +S VGF GSRK++PF
Sbjct: 3 AKTASKPRRKERKNVAEGNAYIKSTFNNTIVSITDPTGAVIASASSGQVGFKGSRKSTPF 62
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGC
Sbjct: 63 AAQLAAEAAARRAQEHGMKKVDVYVKGPGSGRETAIRSLQAAGLEVGSIQDVTPQAHNGC 122
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 123 RPPKRRRV 130
>gi|108802674|ref|YP_636332.1| ribosomal protein S11 [Eucalyptus globulus subsp. globulus]
gi|309322479|ref|YP_003933993.1| ribosomal protein S11 [Eucalyptus grandis]
gi|91207751|sp|Q49KW5|RR11_EUCGG RecName: Full=30S ribosomal protein S11, chloroplastic
gi|60460840|gb|AAX21060.1| ribosomal protein S11 [Eucalyptus globulus subsp. globulus]
gi|308223313|gb|ADO23621.1| ribosomal protein S11 [Eucalyptus grandis]
Length = 138
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS R + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSIPRTGSRRNVRSGSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F+G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FNGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|320108370|ref|YP_004183960.1| 30S ribosomal protein S11 [Terriglobus saanensis SP1PR4]
gi|319926891|gb|ADV83966.1| 30S ribosomal protein S11 [Terriglobus saanensis SP1PR4]
Length = 141
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 91/141 (64%), Gaps = 12/141 (8%)
Query: 1 MPKSPSRIRN------------RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPK 48
M K ++ RERKN+ G V +TFNNT +TITD GNT++W S
Sbjct: 1 MAKQQNQQAKTGKAGKNKKFKKRERKNVPYGLVFVQATFNNTIVTITDQTGNTLSWKSSG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIV 108
+GF GSRK +PFAAQ A + + A++HG+ S++V+VSG G+GR+SA+RAL A G +
Sbjct: 61 SLGFRGSRKGTPFAAQQAAVNAATAARDHGLRSVDVRVSGPGSGRESAVRALAAAGLDVR 120
Query: 109 SICDVTMIAHNGCRPRKRRRI 129
SI DVT I HNGCRP KRRR+
Sbjct: 121 SIRDVTPIPHNGCRPPKRRRV 141
>gi|296268579|ref|YP_003651211.1| 30S ribosomal protein S11 [Thermobispora bispora DSM 43833]
gi|296091366|gb|ADG87318.1| ribosomal protein S11 [Thermobispora bispora DSM 43833]
Length = 136
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT ++ITD +GN I+W+S VGF GSRK++PFAAQ+A ++ + +A
Sbjct: 22 NVAHGHAHIKSTFNNTIVSITDTNGNVISWASAGHVGFKGSRKSTPFAAQMAAENAARRA 81
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 82 MEHGMRKVDVFVKGPGSGRETAIRALQATGLEVDSIQDVTPVPHNGCRPPKRRRV 136
>gi|163840859|ref|YP_001625264.1| 30S ribosomal protein S11 [Renibacterium salmoninarum ATCC 33209]
gi|189040428|sp|A9WSR2|RS11_RENSM RecName: Full=30S ribosomal protein S11
gi|162954335|gb|ABY23850.1| SSU ribosomal protein S11P [Renibacterium salmoninarum ATCC 33209]
Length = 133
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +++KNI G+AH+ STFNNT +TITDP G IAW+S VGF GSRK++PFAA
Sbjct: 8 AVRKPRKKDKKNIALGQAHIKSTFNNTIVTITDPAGAVIAWASSGEVGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HG+ ++V V G G+GR++A+R+L A G + SI DVT AHNGCRP
Sbjct: 68 QLAAEQAAKRAQEHGVRKVDVFVKGPGSGRETAIRSLTAAGLEVGSIQDVTPSAHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 PKRRRV 133
>gi|296141064|ref|YP_003648307.1| 30S ribosomal protein S11 [Tsukamurella paurometabola DSM 20162]
gi|296029198|gb|ADG79968.1| 30S ribosomal protein S11 [Tsukamurella paurometabola DSM 20162]
Length = 137
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 91/126 (72%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
R RE+KN+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAA
Sbjct: 12 KKGASRRREKKNVPHGHAHIKSTFNNTIVSITDPAGNVISWASSGHVGFKGSRKSTPFAA 71
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A ++ + KAQ +G+ ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP
Sbjct: 72 QLAAENAARKAQENGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGCRP 131
Query: 124 RKRRRI 129
KRRR+
Sbjct: 132 PKRRRV 137
>gi|149390572|ref|YP_001294217.1| ribosomal protein S11 [Buxus microphylla]
gi|172048682|sp|A6MM69|RR11_BUXMI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|146762317|gb|ABQ45281.1| ribosomal protein S11 [Buxus microphylla]
Length = 138
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRKNGRIGSRKSGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVMDQGMQRAEVMIKGPGLGRDAALRAIRRSGLLLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|160881759|ref|YP_001560727.1| ribosomal protein S11 [Clostridium phytofermentans ISDg]
gi|226708350|sp|A9KJG8|RS11_CLOPH RecName: Full=30S ribosomal protein S11
gi|160430425|gb|ABX43988.1| ribosomal protein S11 [Clostridium phytofermentans ISDg]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/112 (50%), Positives = 83/112 (74%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A H
Sbjct: 21 RGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAALVH 80
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++EV V G G+GR++A+RAL+A G + SI DVT + HNGCRP KRRR+
Sbjct: 81 GLKTVEVMVKGPGSGREAAIRALQACGIEVTSIKDVTPVPHNGCRPPKRRRV 132
>gi|114804297|ref|YP_762294.1| ribosomal protein S11 [Morus indica]
gi|122166772|sp|Q09WY4|RR11_MORIN RecName: Full=30S ribosomal protein S11, chloroplastic
gi|78100349|gb|ABB20990.1| ribosomal protein S11 [Morus indica]
Length = 138
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPLPRIGSRKNRHMGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+++ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTKRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|298207751|ref|YP_003715930.1| 30S ribosomal protein S11 [Croceibacter atlanticus HTCC2559]
gi|83850389|gb|EAP88257.1| 30S ribosomal protein S11 [Croceibacter atlanticus HTCC2559]
Length = 137
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 76/113 (67%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNN +++T+ G+ I+WSS +GF GS+KN+P+AAQ+A +D S A
Sbjct: 25 AFGEAHISASFNNIIVSLTNKKGDVISWSSAGKMGFRGSKKNTPYAAQLAAEDASGVAHE 84
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++V V G G GR+SA+R++ G + I DVT + HNGCRP KRRR+
Sbjct: 85 AGLRKVKVYVKGPGNGRESAIRSIHNAGIEVTEIIDVTPMPHNGCRPPKRRRV 137
>gi|25027126|ref|NP_737180.1| 30S ribosomal protein S11 [Corynebacterium efficiens YS-314]
gi|33302578|sp|P59371|RS11_COREF RecName: Full=30S ribosomal protein S11
gi|23492406|dbj|BAC17380.1| putative 30S ribosomal protein S11 [Corynebacterium efficiens
YS-314]
Length = 134
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/124 (50%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ G A++ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVAQGHAYIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQM 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP K
Sbjct: 71 AAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTPQPHNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|171741249|ref|ZP_02917056.1| hypothetical protein BIFDEN_00324 [Bifidobacterium dentium ATCC
27678]
gi|229818215|ref|ZP_04448497.1| hypothetical protein BIFANG_03513 [Bifidobacterium angulatum DSM
20098]
gi|283455391|ref|YP_003359955.1| 30S ribosomal protein S11P [Bifidobacterium dentium Bd1]
gi|306823543|ref|ZP_07456918.1| 30S ribosomal protein S11 [Bifidobacterium dentium ATCC 27679]
gi|309803014|ref|ZP_07697115.1| 30S ribosomal protein S11 [Bifidobacterium dentium JCVIHMP022]
gi|171276863|gb|EDT44524.1| hypothetical protein BIFDEN_00324 [Bifidobacterium dentium ATCC
27678]
gi|229784466|gb|EEP20580.1| hypothetical protein BIFANG_03513 [Bifidobacterium angulatum DSM
20098]
gi|283102025|gb|ADB09131.1| rpsK SSU ribosomal protein S11P [Bifidobacterium dentium Bd1]
gi|304553250|gb|EFM41162.1| 30S ribosomal protein S11 [Bifidobacterium dentium ATCC 27679]
gi|308220481|gb|EFO76792.1| 30S ribosomal protein S11 [Bifidobacterium dentium JCVIHMP022]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|237752999|ref|ZP_04583479.1| 30s ribosomal protein s11 [Helicobacter winghamensis ATCC BAA-430]
gi|229375266|gb|EEO25357.1| 30s ribosomal protein s11 [Helicobacter winghamensis ATCC BAA-430]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G H+ + FNNT +TITD GN I WS+ +GF GS+K++P
Sbjct: 1 MAKRNVNKKRVVKKNIARGIIHISAAFNNTSVTITDEMGNVICWSTAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D +KA+ HG+ L VK+ G G+GR++A+++L +I G ++ DVT + HN
Sbjct: 61 YAAQQAVEDAVSKAKEHGIKELGVKIQGPGSGRETAVKSLGSIEGIKVLWFKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRAPKRRRV 130
>gi|309322295|ref|YP_003934146.1| ribosomal protein S11 [Cedrus deodara]
gi|228017092|gb|ACP51914.1| ribosomal protein S11 [Cedrus deodara]
gi|307683221|dbj|BAJ19529.1| ribosomal protein S11 [Cedrus deodara]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G HV ++FNNT +T+TD G +WSS GF G+R+ +
Sbjct: 1 MSKTTRRIGSRRNEHRVLKGVIHVRASFNNTIVTVTDVRGQVFSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|300362365|ref|ZP_07058541.1| 30S ribosomal protein S11 [Lactobacillus gasseri JV-V03]
gi|300353356|gb|EFJ69228.1| 30S ribosomal protein S11 [Lactobacillus gasseri JV-V03]
Length = 129
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R +K++ SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAAKKTARKRRVKKHVESGVAHIHSTFNNTLVMITDVQGNAVAWSSAGALGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A + GM +EV V G GAGR++A+RAL+A G I +I DVT + HNG
Sbjct: 61 FAAQMAAEAAAKSAMDQGMKHVEVSVKGPGAGREAAIRALQAAGLEITAIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
RP KR R+
Sbjct: 121 SRPPKRGRV 129
>gi|108796739|ref|YP_636497.1| ribosomal protein S11 [Zygnema circumcarinatum]
gi|91207763|sp|Q32RM9|RR11_ZYGCR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|61393723|gb|AAX45865.1| ribosomal protein S11 [Zygnema circumcarinatum]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + ++I + ++ G HV ++FNNT ITITD G I+WSS GF ++K++
Sbjct: 1 MVRPANKILIRKNKRRTSKGVIHVQASFNNTIITITDVRGQVISWSSAGASGFKAAKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ+A ++ + GM EV +SG G GRD+ALRA+ G + + DVT + HN
Sbjct: 61 PFAAQIAAENALRVLIDQGMKQAEVMLSGPGRGRDTALRAIINSGIQLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCR K+RR+
Sbjct: 121 GCRAPKKRRV 130
>gi|28212156|ref|NP_783100.1| 30S ribosomal protein S11 [Clostridium tetani E88]
gi|32171609|sp|Q890Q8|RS11_CLOTE RecName: Full=30S ribosomal protein S11
gi|28204600|gb|AAO37037.1| SSU ribosomal protein S11P [Clostridium tetani E88]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNN+ +T+TD GN ++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NIERGCAHIKSTFNNSIVTLTDTAGNALSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSVEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|224283734|ref|ZP_03647056.1| 30S ribosomal protein S11 [Bifidobacterium bifidum NCIMB 41171]
gi|311064872|ref|YP_003971598.1| 30S ribosomal protein S11P RpsK [Bifidobacterium bifidum PRL2010]
gi|313140890|ref|ZP_07803083.1| 30S ribosomal protein S11 [Bifidobacterium bifidum NCIMB 41171]
gi|310867192|gb|ADP36561.1| RpsK SSU ribosomal protein S11P [Bifidobacterium bifidum PRL2010]
gi|313133400|gb|EFR51017.1| 30S ribosomal protein S11 [Bifidobacterium bifidum NCIMB 41171]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK+I G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSIPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|68164837|ref|YP_247633.1| ribosomal protein S11 [Cucumis sativus]
gi|75317291|sp|Q4VZK2|RR11_CUCSA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|67511432|emb|CAJ00792.1| ribosomal protein S11 [Cucumis sativus]
gi|74027133|gb|AAZ94683.1| ribosomal protein S11 [Cucumis sativus]
gi|115432836|gb|ABI97449.1| ribosomal protein S11 [Cucumis sativus]
gi|115498336|gb|ABI98778.1| ribosomal protein S11 [Cucumis sativus]
Length = 138
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPRIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRGVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|300742031|ref|ZP_07072052.1| 30S ribosomal protein S11 [Rothia dentocariosa M567]
gi|311111945|ref|YP_003983167.1| 30S ribosomal protein S11 [Rothia dentocariosa ATCC 17931]
gi|300381216|gb|EFJ77778.1| 30S ribosomal protein S11 [Rothia dentocariosa M567]
gi|310943439|gb|ADP39733.1| 30S ribosomal protein S11 [Rothia dentocariosa ATCC 17931]
Length = 134
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/116 (54%), Positives = 90/116 (77%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
KNIV+G+AH+ STFNNT ++ITDP G I+WSS +GF GSRK++P+AAQ+A + + +
Sbjct: 19 KNIVAGQAHIKSTFNNTIVSITDPTGAVISWSSAGDMGFKGSRKSTPYAAQLAAETAANR 78
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+ HG+ ++V V G G+GR++A+R+L+A G + SI DVT +AHNGCRP KRRR+
Sbjct: 79 AKEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPVAHNGCRPPKRRRV 134
>gi|152989996|ref|YP_001355718.1| 30S ribosomal protein S11 [Nitratiruptor sp. SB155-2]
gi|166231820|sp|A6Q1K2|RS11_NITSB RecName: Full=30S ribosomal protein S11
gi|151421857|dbj|BAF69361.1| 30S ribosomal protein S11 [Nitratiruptor sp. SB155-2]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKGARKKIVKKNIARGVVYINATFNNTVVTVTDEMGNVIAWSSAGSLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A +D AKA+ HG+ + +KV G G+GRD+A++++ AI G ++ D+T + HN
Sbjct: 61 FAAQQAVEDAMAKAKEHGIKEVGIKVQGPGSGRDTAVKSVGAIEGIRVLFFKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|139389983|ref|YP_001123583.1| ribosomal protein S11 [Draba nemorosa]
gi|152060518|sp|A4QL52|RR11_DRANE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134286785|dbj|BAF50407.1| ribosomal protein S11 [Draba nemorosa]
Length = 138
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSASRKNVRKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|261338254|ref|ZP_05966138.1| 30S ribosomal protein S11 [Bifidobacterium gallicum DSM 20093]
gi|270276908|gb|EFA22762.1| 30S ribosomal protein S11 [Bifidobacterium gallicum DSM 20093]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/127 (47%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT +A NG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPVAFNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|23336306|ref|ZP_00121529.1| COG0100: Ribosomal protein S11 [Bifidobacterium longum DJO10A]
gi|58036265|ref|YP_190223.1| 30S ribosomal protein S11 [Bifidobacterium longum NCC2705]
gi|189440594|ref|YP_001955675.1| 30S ribosomal protein S11 [Bifidobacterium longum DJO10A]
gi|213693063|ref|YP_002323649.1| ribosomal protein S11 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227546501|ref|ZP_03976550.1| ribosomal protein S11 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239621035|ref|ZP_04664066.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291457228|ref|ZP_06596618.1| 30S ribosomal protein S11 [Bifidobacterium breve DSM 20213]
gi|296454845|ref|YP_003661989.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133899|ref|YP_004001238.1| rpsk [Bifidobacterium longum subsp. longum BBMN68]
gi|317483425|ref|ZP_07942415.1| 30S ribosomal protein S11 [Bifidobacterium sp. 12_1_47BFAA]
gi|322689904|ref|YP_004209638.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. infantis
157F]
gi|322691845|ref|YP_004221415.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. longum JCM
1217]
gi|62287363|sp|Q5KQA1|RS11_BIFLO RecName: Full=30S ribosomal protein S11
gi|226708333|sp|B3DQD9|RS11_BIFLD RecName: Full=30S ribosomal protein S11
gi|254765368|sp|B7GNB5|RS11_BIFLI RecName: Full=30S ribosomal protein S11
gi|57902626|gb|AAW58056.1| ribosomal protein S11 [Bifidobacterium longum NCC2705]
gi|189429029|gb|ACD99177.1| Ribosomal protein S11 [Bifidobacterium longum DJO10A]
gi|213524524|gb|ACJ53271.1| ribosomal protein S11 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227213050|gb|EEI80929.1| ribosomal protein S11 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516136|gb|EEQ56003.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291381063|gb|EFE88581.1| 30S ribosomal protein S11 [Bifidobacterium breve DSM 20213]
gi|291516446|emb|CBK70062.1| SSU ribosomal protein S11P [Bifidobacterium longum subsp. longum
F8]
gi|296184277|gb|ADH01159.1| ribosomal protein S11 [Bifidobacterium longum subsp. longum JDM301]
gi|311773193|gb|ADQ02681.1| RpsK [Bifidobacterium longum subsp. longum BBMN68]
gi|316915111|gb|EFV36543.1| 30S ribosomal protein S11 [Bifidobacterium sp. 12_1_47BFAA]
gi|320456701|dbj|BAJ67323.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. longum JCM
1217]
gi|320459241|dbj|BAJ69862.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320461240|dbj|BAJ71860.1| 30S ribosomal protein S11 [Bifidobacterium longum subsp. infantis
157F]
Length = 132
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 91/127 (71%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|323700830|ref|ZP_08112742.1| 30S ribosomal protein S11 [Desulfovibrio sp. ND132]
gi|323460762|gb|EGB16627.1| 30S ribosomal protein S11 [Desulfovibrio desulfuricans ND132]
Length = 128
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +E+KNI G AHV +TFNNT +T TD GN ++W+S F GSRK++P
Sbjct: 1 MAKPRRSGKKKEKKNIPVGIAHVKATFNNTIVTFTDVKGNVVSWASAGAH-FKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +AQ+ GM ++ + V G G+GR++A+RA+ +GF + I D+T I HNG
Sbjct: 60 FAAQMAAEAAAKRAQDSGMRTVGIYVKGPGSGREAAMRAINNVGFKVTFIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|123966951|ref|YP_001012032.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9515]
gi|152060808|sp|A2BYR4|RS11_PROM5 RecName: Full=30S ribosomal protein S11
gi|123201317|gb|ABM72925.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9515]
Length = 130
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 78/115 (67%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G H+ STFNNT ++I+D G+ I+WSS GF G+RK +PFAAQ A + + +A
Sbjct: 16 NVPNGVVHIQSTFNNTIVSISDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAAKRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +EV V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 76 LDQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|291280123|ref|YP_003496958.1| 30S ribosomal protein S11 [Deferribacter desulfuricans SSM1]
gi|290754825|dbj|BAI81202.1| 30S ribosomal protein S11 [Deferribacter desulfuricans SSM1]
Length = 126
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R +E++NI G AH+ STFNNT IT TD +GN I W S GF +RK++P
Sbjct: 1 MAKP---RRKKEKRNIPKGIAHIKSTFNNTIITFTDVNGNVICWDSSGTAGFKNARKSTP 57
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + + KA +G+ +EV V G GAGR+SA+RA++A G I I DVT I HNG
Sbjct: 58 YAAQLAAESAAKKAVENGVREVEVNVKGPGAGRESAIRAIQAAGIKITVIRDVTPIPHNG 117
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 118 CRPRKKRRV 126
>gi|223933081|ref|ZP_03625074.1| ribosomal protein S11 [Streptococcus suis 89/1591]
gi|223898268|gb|EEF64636.1| ribosomal protein S11 [Streptococcus suis 89/1591]
Length = 143
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 88/126 (69%), Gaps = 2/126 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG AH+ +TFNNT + ITD HGN IAWSS +GF GSRK++P
Sbjct: 1 MAKPTR--KRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG
Sbjct: 59 FAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNG 118
Query: 121 CRPRKR 126
RP KR
Sbjct: 119 ARPPKR 124
>gi|114329688|ref|YP_740509.1| ribosomal protein S11 [Citrus sinensis]
gi|122166150|sp|Q09ME4|RR11_CITSI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|113952654|gb|ABI49052.1| ribosomal protein S11 [Citrus sinensis]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KSP R + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSPPRSGSRRPGRIGSRKSGRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|242620060|ref|YP_003002064.1| 30S ribosomal protein S11 [Aureococcus anophagefferens]
gi|239997305|gb|ACS36828.1| 30S ribosomal protein S11 [Aureococcus anophagefferens]
Length = 129
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M R +++KNIVSG H+ STFNNT ITITD GNTI+WSS VGF G+RK +P
Sbjct: 1 MVVKTKRSTKKQKKNIVSGVVHINSTFNNTIITITDLAGNTISWSSAGSVGFKGARKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ AT+ S A G+ +EV + G G+GR++++RAL +G IVSI D+T I HNG
Sbjct: 61 FAAQTATEAASTAAMGQGLRKVEVLIRGQGSGRETSVRALEVLGLDIVSIKDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|76798228|ref|ZP_00780478.1| ribosomal protein S11 [Streptococcus agalactiae 18RS21]
gi|77406105|ref|ZP_00783179.1| ribosomal protein S11 [Streptococcus agalactiae H36B]
gi|22533089|gb|AAM98991.1|AE014195_10 ribosomal protein S11 [Streptococcus agalactiae 2603V/R]
gi|21903782|gb|AAM78672.1| 30S ribosomal protein S11 [Streptococcus pyogenes MGAS315]
gi|76563298|gb|ABA45882.1| ribosomal protein S11 [Streptococcus agalactiae A909]
gi|76586437|gb|EAO62945.1| ribosomal protein S11 [Streptococcus agalactiae 18RS21]
gi|77175286|gb|EAO78081.1| ribosomal protein S11 [Streptococcus agalactiae H36B]
Length = 118
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KNI SG AH+ +TFNNT + ITD HGN +AWSS +GF GSRK++PFAAQ+A + +
Sbjct: 2 KKNIESGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAK 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
AQ HG+ ++EV V G G+GR+SA+RAL A G + +I DVT + HNG RP KRRR+
Sbjct: 62 SAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV 118
>gi|290487510|gb|ADD30139.1| ribosomal protein S11 [Ficus sp. Moore 315]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPRIGSRKNRHMSSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGARRGTPFAAQTVAGNAIRAVMDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|157165683|ref|YP_001467697.1| 30S ribosomal protein S11 [Campylobacter concisus 13826]
gi|166231808|sp|A7ZFY9|RS11_CAMC1 RecName: Full=30S ribosomal protein S11
gi|112800797|gb|EAT98141.1| ribosomal protein S11 [Campylobacter concisus 13826]
Length = 130
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RK+I G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKIVKKKVVRKSIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ + G + D+T + HN
Sbjct: 61 YAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGGVEGIKVTFFKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|302390983|ref|YP_003826803.1| 30S ribosomal protein S11P [Acetohalobium arabaticum DSM 5501]
gi|302203060|gb|ADL11738.1| SSU ribosomal protein S11P [Acetohalobium arabaticum DSM 5501]
Length = 126
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/125 (48%), Positives = 89/125 (71%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
R R+ K++ G+AH+ STFNNT +++TD GN I+WSS +GF G++K++P+AAQ
Sbjct: 2 ARRKNERKAKHVTKGQAHICSTFNNTIVSLTDDKGNVISWSSAGNLGFKGTKKSTPYAAQ 61
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A +D + +A HG+ ++V V G GAGR++A+RAL++ G I I DVT I HNGCRP
Sbjct: 62 MAAEDAAKEAMEHGLKKVKVFVKGPGAGREAAVRALQSTGLEIDLIKDVTPIPHNGCRPP 121
Query: 125 KRRRI 129
KRRR+
Sbjct: 122 KRRRV 126
>gi|310287999|ref|YP_003939258.1| 30S ribosomal protein S11 [Bifidobacterium bifidum S17]
gi|309251936|gb|ADO53684.1| 30S ribosomal protein S11 [Bifidobacterium bifidum S17]
Length = 132
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK+I G+AH+ STFNNT I+ITDP G ++W S VGF GSRK++P+A
Sbjct: 6 QAARKPRRRDRKSIPVGQAHIKSTFNNTIISITDPSGAVVSWVSGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|146329270|ref|YP_001210129.1| 30S ribosomal protein S11 [Dichelobacter nodosus VCS1703A]
gi|166231812|sp|A5EX96|RS11_DICNV RecName: Full=30S ribosomal protein S11
gi|146232740|gb|ABQ13718.1| 30S ribosomal protein S11 [Dichelobacter nodosus VCS1703A]
Length = 132
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/132 (46%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSR---IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ + +R + ++ +V AHV ++FNNT +TITD GNT++W++ GF GSRK
Sbjct: 1 MAKAAGKQKNVRKKAKRVVVDAVAHVHASFNNTIVTITDGQGNTLSWATAGGSGFRGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + A+ +G+ +L+V + G G GR+SA+RAL + GF I SI DVT I
Sbjct: 61 STPFAAQIAAERAGEVAKEYGVQNLDVNIKGPGPGRESAIRALNSAGFNIHSITDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 HNGCRPPKKRRV 132
>gi|11467450|ref|NP_043596.1| ribosomal protein S11 [Odontella sinensis]
gi|1350867|sp|P49499|RR11_ODOSI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|1185145|emb|CAA91628.1| 30S ribosomal protein S11 [Odontella sinensis]
Length = 130
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + +++ + ++G H+ STFNNT +TIT+ G+TI+W+S GF G+RK +
Sbjct: 1 MAQKIRKSTFKKDKNSSINGVVHIQSTFNNTIVTITNITGDTISWASAGSSGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A + GM S+EV V G G+GR++A+R++ GF + SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALDALSKGMKSVEVLVKGQGSGRETAIRSIEGAGFEVTSIQDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|114107079|ref|YP_740235.1| ribosomal protein S11 [Liriodendron tulipifera]
gi|122239939|sp|Q0G9I6|RR11_LIRTU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|113201027|gb|ABI32542.1| ribosomal protein S11 [Liriodendron tulipifera]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKSGRRIPKGVIHVQASFNNTIVTVTDVLGQVVSWSSAGTCGFRGTRRGTPFAAQTAAGN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|307694125|ref|ZP_07636362.1| 30S ribosomal protein S11 [Ruminococcaceae bacterium D16]
Length = 134
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ RERKN+ G+ H+ S+FNNT +T+TD GN ++W+S +GF GSRK++PFAAQ A +
Sbjct: 13 KRRERKNVEKGQVHIRSSFNNTMVTVTDMQGNALSWASSGGLGFRGSRKSTPFAAQTAAE 72
Query: 69 DCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ A +G+ +EV V G GAGR++A+RAL+A+G + I DVT + HNGCRP KRR
Sbjct: 73 TAAKAAMEGYGLKIVEVYVKGPGAGREAAIRALQAVGLEVTLIKDVTPVPHNGCRPPKRR 132
Query: 128 RI 129
R+
Sbjct: 133 RV 134
>gi|124003686|ref|ZP_01688534.1| ribosomal protein S11 [Microscilla marina ATCC 23134]
gi|123990741|gb|EAY30208.1| ribosomal protein S11 [Microscilla marina ATCC 23134]
Length = 130
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 81/127 (63%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + + R G+ H+ ++FNN I+IT+ G I+W+S +GF GS+KN+P+A
Sbjct: 4 KRKDKAKKRVVNVEAVGQVHIRASFNNIIISITNSTGQVISWASAGKMGFRGSKKNTPYA 63
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQVA +C+ A GM EV V G G+GR+SA+R ++ IG I +I DVT + HNGCR
Sbjct: 64 AQVAAKNCAEVAHGLGMRKAEVFVKGPGSGRESAIRTIQNIGIEITAIKDVTPLPHNGCR 123
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 124 PAKRRRV 130
>gi|167391839|ref|YP_001671716.1| ribosomal protein S11 [Carica papaya]
gi|224493273|sp|B1A968|RR11_CARPA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|166344166|gb|ABY86816.1| ribosomal protein S11 [Carica papaya]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNVRSGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|302388738|ref|YP_003824559.1| SSU ribosomal protein S11P [Thermosediminibacter oceani DSM 16646]
gi|302199366|gb|ADL06936.1| SSU ribosomal protein S11P [Thermosediminibacter oceani DSM 16646]
Length = 127
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/111 (55%), Positives = 81/111 (72%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G+AH+ STFNNT +TITD GN I W+S VGF GSRK +PFAAQ+A + + KA ++G
Sbjct: 17 GKAHIHSTFNNTIVTITDEAGNPITWASAGTVGFKGSRKGTPFAAQMAAESAARKAMDYG 76
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++EV V G G GR++A+R+L+A G I I DVT I HNGCRP KRRR+
Sbjct: 77 LRTVEVFVKGPGPGREAAIRSLQAAGLEISVIKDVTPIPHNGCRPPKRRRV 127
>gi|254427363|ref|ZP_05041070.1| ribosomal protein S11 [Alcanivorax sp. DG881]
gi|196193532|gb|EDX88491.1| ribosomal protein S11 [Alcanivorax sp. DG881]
Length = 107
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 77/106 (72%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLE 83
++FNNT ITITD GN ++W++ GF GSRK++PFAAQVA ++ A+++G+ +LE
Sbjct: 2 HASFNNTIITITDRQGNALSWATSGGAGFRGSRKSTPFAAQVAAENAGNAAKDYGLKNLE 61
Query: 84 VKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
V+V G G GR+S++RAL G+ I I DVT I HNGCRP K+RR+
Sbjct: 62 VRVKGPGPGRESSIRALNGCGYKITHIEDVTPIPHNGCRPPKKRRV 107
>gi|169794106|ref|YP_001718470.1| ribosomal protein S11 [Manihot esculenta]
gi|224493281|sp|B1NWI3|RR11_MANES RecName: Full=30S ribosomal protein S11, chloroplastic
gi|157695918|gb|ABV66187.1| ribosomal protein S11 [Manihot esculenta]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + I G HV ++FNNT +TITD G I+WSS G
Sbjct: 1 MAKPLPKISSRRNGRIGSRKNSRKIPKGVIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|218961408|ref|YP_001741183.1| 30S ribosomal subunit protein S11 [Candidatus Cloacamonas
acidaminovorans]
gi|167730065|emb|CAO80977.1| 30S ribosomal subunit protein S11 [Candidatus Cloacamonas
acidaminovorans]
Length = 129
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 76/129 (58%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R G +V S+FNNT +T+TD GN +AWSS VG GSRK++P
Sbjct: 1 MATKTRTKKKRVRLAFDEGLFYVHSSFNNTIVTLTDRAGNVLAWSSGGKVGNKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + + G+ + V V G G GR+SA+RA+ A G + I D T I HNG
Sbjct: 61 FAAQVAATEVAKAGLDMGIQKVGVIVKGPGGGRESAIRAVNAAGMKVTMIKDATPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K RRI
Sbjct: 121 CRPPKTRRI 129
>gi|87300891|ref|ZP_01083733.1| 30S ribosomal protein S11 [Synechococcus sp. WH 5701]
gi|87284762|gb|EAQ76714.1| 30S ribosomal protein S11 [Synechococcus sp. WH 5701]
Length = 130
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRER-KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + ++ +N+ +G AH+ STFNNT ++ITD G I+WSS GF G+RK +
Sbjct: 1 MAKPAKKTGAKKTKRNVPNGVAHIQSTFNNTIVSITDTAGEVISWSSAGASGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + +A GM +EV V G G+GR++A+RAL+ G I I DVT + HN
Sbjct: 61 PFAAQTAAEAAGRRALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRRSKRRRV 130
>gi|221105228|ref|XP_002170877.1| PREDICTED: similar to ribosomal protein S11, partial [Hydra
magnipapillata]
Length = 124
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ ++ R + SG AH+ +TFNN I++T+ G I+WSS +GF GS+KN+P
Sbjct: 1 MAKATAKKRKVIVE--SSGEAHISATFNNIIISLTNKKGEVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +DC A G+ ++V V G G GR+SA+R++ G + I DVT + HNG
Sbjct: 59 YAAQMAAEDCGKVALEAGLKKVKVYVKGPGNGRESAIRSIHNSGIEVTEIIDVTPMPHNG 118
Query: 121 CRPRKR 126
CRP KR
Sbjct: 119 CRPPKR 124
>gi|139389129|ref|YP_001123847.1| ribosomal protein S11 [Nasturtium officinale]
gi|152060522|sp|A4QLW6|RR11_NASOF RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134287052|dbj|BAF50671.1| ribosomal protein S11 [Nasturtium officinale]
Length = 138
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSSSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|226968666|ref|YP_002808626.1| small subunit ribosomal protein S11 [Micromonas sp. RCC299]
gi|226431144|gb|ACO55550.1| small subunit ribosomal protein S11 [Micromonas sp. RCC299]
Length = 130
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + ++ + R+ + G H+++TFNNT +TI+D G IA SS GF G+RK +
Sbjct: 1 MASKQRKSVQKKARRKVQRGVVHILATFNNTLVTISDRSGMVIASSSSGACGFRGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + K+ ++G+ ++V V G GAGR+ A+RAL+ +G I I DVT + HN
Sbjct: 61 PFAAQTAAEEAARKSLDYGLKYVDVMVKGPGAGREMAIRALQQLGLGITLIRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|7524685|ref|NP_042439.1| ribosomal protein S11 [Pinus thunbergii]
gi|237688549|ref|YP_002905167.1| ribosomal protein S11 [Pinus contorta]
gi|1173180|sp|P41630|RR11_PINTH RecName: Full=30S ribosomal protein S11, chloroplastic
gi|1262679|dbj|BAA04396.1| ribosomal protein S11 [Pinus thunbergii]
gi|226875377|gb|ACO89115.1| ribosomal protein S11 [Pinus contorta]
gi|228015950|gb|ACP50790.1| ribosomal protein S11 [Pinus taeda]
gi|228016018|gb|ACP50857.1| ribosomal protein S11 [Pinus resinosa]
gi|228016332|gb|ACP51166.1| ribosomal protein S11 [Pinus ponderosa]
gi|228016403|gb|ACP51236.1| ribosomal protein S11 [Pinus thunbergii]
gi|228016470|gb|ACP51302.1| ribosomal protein S11 [Pinus torreyana subsp. insularis]
gi|228016531|gb|ACP51362.1| ribosomal protein S11 [Pinus torreyana subsp. torreyana]
gi|228016843|gb|ACP51669.1| ribosomal protein S11 [Pinus attenuata]
gi|228016969|gb|ACP51793.1| ribosomal protein S11 [Pinus banksiana]
gi|228017033|gb|ACP51856.1| ribosomal protein S11 [Pinus canariensis]
gi|228017207|gb|ACP52027.1| ribosomal protein S11 [Pinus leiophylla var. chihuahuana]
gi|228017469|gb|ACP52285.1| ribosomal protein S11 [Pinus merkusii]
gi|228017725|gb|ACP52537.1| ribosomal protein S11 [Pinus pinaster]
Length = 130
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G +V ++FNNT +T TD G ++WSS GF G+R+ +
Sbjct: 1 MSKTIKRIGSRRNEHRVLKGVIYVQASFNNTIVTATDVRGQVLSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRALMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|290487526|gb|ADD30147.1| ribosomal protein S11 [Trochodendron aralioides]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPRIGSRGNGRIGSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|253581362|ref|ZP_04858588.1| SSU ribosomal protein S11P [Fusobacterium varium ATCC 27725]
gi|257470858|ref|ZP_05634948.1| 30S ribosomal protein S11 [Fusobacterium ulcerans ATCC 49185]
gi|317065061|ref|ZP_07929546.1| SSU ribosomal protein S11P [Fusobacterium ulcerans ATCC 49185]
gi|251836726|gb|EES65260.1| SSU ribosomal protein S11P [Fusobacterium varium ATCC 27725]
gi|313690737|gb|EFS27572.1| SSU ribosomal protein S11P [Fusobacterium ulcerans ATCC 49185]
Length = 129
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT + ITD G ++W S GF G++K +P
Sbjct: 1 MAKKKVAKIKKKLKNIPNGVAHIHSTFNNTIVAITDAEGKVVSWRSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVKV G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAANIAMENGMKKVEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|290487512|gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKNARRIPKGVIHVQASFNNTIVTVTDIRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
FSG+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FSGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487492|gb|ADD30130.1| ribosomal protein S11 [Nelumbo nucifera]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGLRKSGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGLQLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|258651410|ref|YP_003200566.1| 30S ribosomal protein S11 [Nakamurella multipartita DSM 44233]
gi|258554635|gb|ACV77577.1| ribosomal protein S11 [Nakamurella multipartita DSM 44233]
Length = 136
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ +IR +E+KN+ G AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAA
Sbjct: 11 AVKKIRRKEKKNVSHGHAHIKSTFNNTIVSITDPTGAVISWASAGHVGFKGSRKSTPFAA 70
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A ++ + +A HGM ++V V G G+GR++A+R+L+A G + +I DVT AHNG RP
Sbjct: 71 QMAAENAARQAIEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAISDVTPQAHNGTRP 130
Query: 124 RKRRRI 129
KRRR+
Sbjct: 131 PKRRRV 136
>gi|183601969|ref|ZP_02963338.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682881|ref|YP_002469264.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190458|ref|YP_002967852.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195864|ref|YP_002969419.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|254765367|sp|B8DW37|RS11_BIFA0 RecName: Full=30S ribosomal protein S11
gi|183218854|gb|EDT89496.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620531|gb|ACL28688.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248850|gb|ACS45790.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250418|gb|ACS47357.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289178182|gb|ADC85428.1| SSU ribosomal protein S11P [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295793445|gb|ADG32980.1| 30S ribosomal protein S11 [Bifidobacterium animalis subsp. lactis
V9]
Length = 132
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R R+RK+I G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKTRRRDRKSIPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT A NG R
Sbjct: 66 AGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAFNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|290487506|gb|ADD30137.1| ribosomal protein S11 [Cornus florida]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRIGSRRNARIGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGSCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|326203869|ref|ZP_08193731.1| 30S ribosomal protein S11 [Clostridium papyrosolvens DSM 2782]
gi|325985967|gb|EGD46801.1| 30S ribosomal protein S11 [Clostridium papyrosolvens DSM 2782]
Length = 134
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 20 NIERGAAHIRSSFNNTIVTLTDTAGNALSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G GAGR++A+RAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 80 MEHGLKTVEVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHNGCRPPKRRRV 134
>gi|300870624|ref|YP_003785495.1| 30S ribosomal protein S11 [Brachyspira pilosicoli 95/1000]
gi|300688323|gb|ADK30994.1| 30S ribosomal protein S11 [Brachyspira pilosicoli 95/1000]
Length = 136
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQ 75
G H+ ++FNNT +TITD +G+T++W+S + G + S+K++PFAAQVA++ S KA
Sbjct: 23 AFGIVHIKASFNNTIVTITDRNGDTLSWASAGLDGEYKSSKKSTPFAAQVASEKASKKAY 82
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +EV V G G GR+S++RA+ A G + I DVT + HNGCRP+KRRRI
Sbjct: 83 EMGVREVEVYVKGPGMGRESSIRAVEAAGLKVKLIKDVTPMPHNGCRPQKRRRI 136
>gi|262341036|ref|YP_003283891.1| 30S ribosomal protein S11 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272373|gb|ACY40281.1| 30S ribosomal protein S11 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 128
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS R R G AH+ STFNN IT+T+ G IAWSS + F GS+KN+P
Sbjct: 1 MAKSSL-GRKRSVVVDSLGEAHIQSTFNNIVITLTNKKGEVIAWSSAGKMNFKGSKKNTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A ++ + +A N G+ +EVKV G GAGRD+A+RAL G + I D+T + HNG
Sbjct: 60 YAAQMAAENVAKEAINAGIKKVEVKVKGPGAGRDAAIRALSNSGIVVTIIKDITPLPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|169142820|ref|YP_001687244.1| ribosomal protein S11 [Aneura mirabilis]
gi|224493271|sp|B0YPQ8|RR11_ANEMR RecName: Full=30S ribosomal protein S11, plastid
gi|153973846|gb|ABS54506.1| ribosomal protein S11 [Aneura mirabilis]
Length = 130
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 72/111 (64%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G H+ ++FNNT IT+TD G ++WSS GF G+RK++PFAAQ A ++ + G
Sbjct: 20 GVIHIQASFNNTIITVTDTRGRVVSWSSAGACGFKGARKSTPFAAQTAAENAIRILIDRG 79
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ EV +SG G GRD+ALRA+R G + + DVT + HNGCRP +RR+
Sbjct: 80 LKQAEVMISGPGPGRDTALRAIRRSGIVLNFVRDVTPMPHNGCRPPGKRRV 130
>gi|139389675|ref|YP_001123232.1| ribosomal protein S11 [Arabis hirsuta]
gi|152060513|sp|A4QK51|RR11_ARAHI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134286430|dbj|BAF50056.1| ribosomal protein S11 [Arabis hirsuta]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSGSRKNVRRIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|296936705|gb|ADH94377.1| ribosomal protein S11 [Syzygium cumini]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS R + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSRPRTGSRRNARSGSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F+G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FNGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487486|gb|ADD30127.1| ribosomal protein S11 [Ilex cornuta]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ R+ + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRVGSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487490|gb|ADD30129.1| ribosomal protein S11 [Meliosma aff. cuneifolia Moore 333]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPILRIGSRRTGRIGSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVMEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|291549395|emb|CBL25657.1| SSU ribosomal protein S11P [Ruminococcus torques L2-14]
Length = 131
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/113 (50%), Positives = 84/113 (74%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ S+FNNT +T+TD GN ++W+S +GF GSRK++P+AAQ+A + + A
Sbjct: 19 ERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAALV 78
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ +++V V G G+GR++A+RAL+A G +VSI DVT + HNGCRP KRRR+
Sbjct: 79 HGLKTVDVFVKGPGSGREAAIRALQACGIDVVSIKDVTPVPHNGCRPPKRRRV 131
>gi|220928234|ref|YP_002505143.1| 30S ribosomal protein S11 [Clostridium cellulolyticum H10]
gi|219998562|gb|ACL75163.1| ribosomal protein S11 [Clostridium cellulolyticum H10]
Length = 134
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNNT +T+TD GN ++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 20 NIERGAAHIRSTFNNTIVTLTDTAGNALSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G GAGR++A+RAL+A G + I DVT I HNGCRP KRRR+
Sbjct: 80 MEHGLKTVEVYVKGPGAGREAAIRALQAAGLEVSLIKDVTPIPHNGCRPPKRRRV 134
>gi|139388127|ref|YP_001123319.1| ribosomal protein S11 [Barbarea verna]
gi|152060514|sp|A4QKD8|RR11_BARVE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134286518|dbj|BAF50143.1| ribosomal protein S11 [Barbarea verna]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|73913589|gb|AAZ91710.1| 30S Ribosomal protein S11 [Corynebacterium stationis]
Length = 134
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 63/134 (47%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIRNRE-----RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M + R +KN+ G A++ S FNNT ++ITDP G I+WSS VGF GS
Sbjct: 1 MAQKTQSTSRRSGRRVVKKNVAQGHAYIKSNFNNTIVSITDPSGAVISWSSSGQVGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQ+A + + KA HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 RKSTPFAAQMAAESAARKAMEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
HNGCRP KRR +
Sbjct: 121 QPHNGCRPPKRRHV 134
>gi|7525066|ref|NP_051091.1| ribosomal protein S11 [Arabidopsis thaliana]
gi|139387285|ref|YP_001123406.1| ribosomal protein S11 [Capsella bursa-pastoris]
gi|139388943|ref|YP_001123670.1| ribosomal protein S11 [Lepidium virginicum]
gi|139389451|ref|YP_001123148.1| ribosomal protein S11 [Olimarabidopsis pumila]
gi|139389834|ref|YP_001123495.1| ribosomal protein S11 [Crucihimalaya wallichii]
gi|139390185|ref|YP_001123758.1| ribosomal protein S11 [Lobularia maritima]
gi|297837929|ref|XP_002886846.1| ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
gi|6685906|sp|P56802|RR11_ARATH RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060515|sp|A4QKM5|RR11_CAPBU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060517|sp|A4QKW4|RR11_CRUWA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060520|sp|A4QLD9|RR11_LEPVR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060521|sp|A4QLM7|RR11_LOBMA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060523|sp|A4QJW4|RR11_OLIPU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|5881727|dbj|BAA84418.1| ribosomal protein S11 [Arabidopsis thaliana]
gi|134286345|dbj|BAF49972.1| ribosomal protein S11 [Olimarabidopsis pumila]
gi|134286606|dbj|BAF50230.1| ribosomal protein S11 [Capsella bursa-pastoris]
gi|134286696|dbj|BAF50319.1| ribosomal protein S11 [Crucihimalaya wallichii]
gi|134286873|dbj|BAF50494.1| ribosomal protein S11 [Lepidium virginicum]
gi|134286962|dbj|BAF50582.1| ribosomal protein S11 [Lobularia maritima]
gi|262400796|gb|ACY66285.1| ribosomal protein S11 [Brassica napus]
gi|297332687|gb|EFH63105.1| ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
Length = 138
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|237653972|ref|YP_002890286.1| 30S ribosomal protein S11 [Thauera sp. MZ1T]
gi|237625219|gb|ACR01909.1| ribosomal protein S11 [Thauera sp. MZ1T]
Length = 129
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +++R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTGTKVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ G+ +LEV++ G G GR+S++RAL A+G I SI D+T I HNG
Sbjct: 61 FAAQVAAEAAGKVAQECGIKNLEVRIKGPGPGRESSVRALNALGIKISSITDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|290487504|gb|ADD30136.1| ribosomal protein S11 [Bulnesia arborea]
Length = 138
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSR---------IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K R + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIKRIGSRRNVRITSRKNTRKIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGLLLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|296119326|ref|ZP_06837894.1| 30S ribosomal protein S11 [Corynebacterium ammoniagenes DSM 20306]
gi|295967718|gb|EFG80975.1| 30S ribosomal protein S11 [Corynebacterium ammoniagenes DSM 20306]
Length = 134
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 63/134 (47%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIRNRE-----RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M + R +KN+ G A++ S FNNT ++ITDP G I+WSS VGF GS
Sbjct: 1 MAQKTQSTSRRSGRRVVKKNVALGHAYIKSNFNNTIVSITDPSGAVISWSSSGQVGFKGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK++PFAAQ+A + + KA HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 RKSTPFAAQMAAESAARKAMEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTP 120
Query: 116 IAHNGCRPRKRRRI 129
HNGCRP KRR +
Sbjct: 121 QPHNGCRPPKRRHV 134
>gi|108773380|ref|YP_635842.1| ribosomal protein S11 [Oltmannsiellopsis viridis]
gi|122238320|sp|Q20F03|RR11_OLTVI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|82541962|gb|ABB82003.1| ribosomal protein S11 [Oltmannsiellopsis viridis]
Length = 129
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 84/129 (65%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + + + SG AHV +TFNNT ITIT+P G+ +AW S GF G+RK++P
Sbjct: 1 MAKQVRKASKKTKLKVPSGVAHVQATFNNTIITITNPAGDVLAWCSAGASGFKGARKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAA++A + + K+ ++G+ + V + G G+GR+SA+R L G I + D+T I HNG
Sbjct: 61 FAAKIAAETAARKSMDYGLRQISVIIKGAGSGRESAIRGLSEAGLEIKLLRDITSIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|290487480|gb|ADD30124.1| ribosomal protein S11 [Aucuba japonica]
Length = 138
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +TITD G ++WSS G
Sbjct: 1 MAKAIPRIGSRRTGRIGSRKSARRIPKGVIHVQASFNNTIVTITDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|258543842|ref|ZP_05704076.1| 30S ribosomal protein S11 [Cardiobacterium hominis ATCC 15826]
gi|258520931|gb|EEV89790.1| 30S ribosomal protein S11 [Cardiobacterium hominis ATCC 15826]
Length = 132
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/132 (49%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 1 MPKSPSR---IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ S+ +R + ++ +V AHV ++FNNT +TITD GNT++W++ GF GSRK
Sbjct: 1 MAKAASKQKNVRKKAKRVVVDAVAHVHASFNNTIVTITDGQGNTLSWATAGGSGFRGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA + A+ G+ +L+V + G G GR+SA+RAL A+GF I SI DVT I
Sbjct: 61 STPFAAQVAAERAGNAAKEFGVQNLDVNIKGPGPGRESAVRALNAVGFNIHSITDVTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 HNGCRPPKKRRV 132
>gi|296130463|ref|YP_003637713.1| 30S ribosomal protein S11 [Cellulomonas flavigena DSM 20109]
gi|296022278|gb|ADG75514.1| 30S ribosomal protein S11 [Cellulomonas flavigena DSM 20109]
Length = 133
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 93/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +E+KN+ G+AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PFAA
Sbjct: 8 AVRKPRRKEKKNVSHGQAHIKSTFNNTIVSITDPSGAVIAWASSGQVGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNGCRP
Sbjct: 68 QLAAEAAARRAQEHGMRKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPQAHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 PKRRRV 133
>gi|52220842|ref|YP_086998.1| ribosomal protein S11 [Panax ginseng]
gi|62287416|sp|Q68RX4|RR11_PANGI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|51235345|gb|AAT98541.1| ribosomal protein S11 [Panax ginseng]
Length = 138
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ R + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRSGSRRSGRIGSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|317153934|ref|YP_004121982.1| 30S ribosomal protein S11 [Desulfovibrio aespoeensis Aspo-2]
gi|316944185|gb|ADU63236.1| 30S ribosomal protein S11 [Desulfovibrio aespoeensis Aspo-2]
Length = 128
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +E+K I G AHV +TFNNT +T TD GN ++W+S F GSRK++P
Sbjct: 1 MAKPRRSGKKKEKKIIPVGIAHVKATFNNTIVTFTDVKGNVVSWASAGAH-FKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + +AQ+ GM ++ + V G G+GR++A+RA+ GF + I D+T I HNG
Sbjct: 60 FAAQMAAESAAKRAQDSGMRTVGIYVKGPGSGREAAMRAISNAGFKVTFIRDITPIPHNG 119
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 120 CRPPKRRRV 128
>gi|81176284|ref|YP_398361.1| ribosomal protein S11 [Lactuca sativa]
gi|91207753|sp|Q332U4|RR11_LACSA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|78675202|dbj|BAE47628.1| chloroplast 30S ribosomal protein S11 [Lactuca sativa]
gi|88657015|gb|ABD47265.1| ribosomal protein S11 [Lactuca sativa]
Length = 136
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 2 PKSPSRIR---NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
PK SR R + + I G H+ ++FNNT +T+TD G ++WSS GF G+++
Sbjct: 6 PKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTSGFRGTKRG 65
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + GM EV + G G GRD+ALRA+R G + + DVT + H
Sbjct: 66 TPFAAQTAAGHAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPH 125
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 126 NGCRPPKKRRV 136
>gi|323149115|ref|YP_004222679.1| ribosomal protein S11 [Anthriscus cerefolium]
gi|289645608|gb|ADD13671.1| ribosomal protein S11 [Anthriscus cerefolium]
Length = 138
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|301057480|ref|ZP_07198576.1| 30S ribosomal protein S11 [delta proteobacterium NaphS2]
gi|300448408|gb|EFK12077.1| 30S ribosomal protein S11 [delta proteobacterium NaphS2]
Length = 131
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/115 (56%), Positives = 78/115 (67%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G H+ STFNNT ITITD GN IA SS G GSRK++PFAAQ+A D KA
Sbjct: 17 NVPTGIVHIQSTFNNTIITITDTSGNVIAQSSAGRGGVKGSRKSTPFAAQIAGRDALKKA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV+V G G GR++ALR+L+ GFT+ I DVT I HNGCRP KRRR+
Sbjct: 77 MEQGMRVAEVRVKGPGVGREAALRSLQVEGFTVTMIRDVTPIPHNGCRPPKRRRV 131
>gi|299830398|ref|YP_003734613.1| ribosomal protein S11 [Kryptoperidinium foliaceum]
gi|297385100|gb|ADI40398.1| ribosomal protein S11 [Kryptoperidinium foliaceum]
Length = 130
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M ++ + + + + SG H+ STFNNT +TIT+ G+T++W+S GF G+RK++
Sbjct: 1 MAQTNRKSTTKKTKNSFASGIVHIQSTFNNTIVTITNLTGDTVSWASAGSSGFKGARKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A + GM ++E+ V G G+GR++A+RA+ GF I SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALTALSTGMKNVEILVKGQGSGRETAIRAIEGAGFEITSIQDITSVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|325972638|ref|YP_004248829.1| 30S ribosomal protein S11 [Spirochaeta sp. Buddy]
gi|324027876|gb|ADY14635.1| 30S ribosomal protein S11 [Spirochaeta sp. Buddy]
Length = 125
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 81/124 (65%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ + + +K + G ++ +TFNNT +T+TD +GN ++W+S +GF G++K++P+AAQ
Sbjct: 2 ATAKRKVKKTVYEGNVYIQATFNNTIVTVTDLNGNAVSWASAGGLGFRGAKKSTPYAAQT 61
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ + A + G+ + V V G G GR+SA+R L +G + SI DVT I HNGCRPRK
Sbjct: 62 TAEKAAKAAMDSGLQEVNVFVKGPGVGRESAIRTLGVLGLKVRSIRDVTPIPHNGCRPRK 121
Query: 126 RRRI 129
RR+
Sbjct: 122 SRRV 125
>gi|33864021|ref|NP_895581.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9313]
gi|59798849|sp|Q7V524|RS11_PROMM RecName: Full=30S ribosomal protein S11
gi|33635605|emb|CAE21929.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. MIT 9313]
Length = 130
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 58/116 (50%), Positives = 77/116 (66%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ +G AH+ STFNNT ++I D G IAWSS GF G+RK +PFAAQ A + + +
Sbjct: 15 RNVPNGVAHIQSTFNNTIVSIADTAGEVIAWSSAGASGFKGARKGTPFAAQTAAEAAARR 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A GM +EV V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 75 ALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|168181891|ref|ZP_02616555.1| 30S ribosomal protein S11 [Clostridium botulinum Bf]
gi|237796915|ref|YP_002864467.1| 30S ribosomal protein S11 [Clostridium botulinum Ba4 str. 657]
gi|259494616|sp|C3KVM4|RS11_CLOB6 RecName: Full=30S ribosomal protein S11
gi|182674941|gb|EDT86902.1| 30S ribosomal protein S11 [Clostridium botulinum Bf]
gi|229263937|gb|ACQ54970.1| 30S ribosomal protein S11 [Clostridium botulinum Ba4 str. 657]
Length = 132
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|148381394|ref|YP_001255935.1| ribosomal protein S11 [Clostridium botulinum A str. ATCC 3502]
gi|153934232|ref|YP_001385769.1| 30S ribosomal protein S11 [Clostridium botulinum A str. ATCC 19397]
gi|153936543|ref|YP_001389176.1| 30S ribosomal protein S11 [Clostridium botulinum A str. Hall]
gi|170754313|ref|YP_001783094.1| 30S ribosomal protein S11 [Clostridium botulinum B1 str. Okra]
gi|171769212|sp|A7FZ46|RS11_CLOB1 RecName: Full=30S ribosomal protein S11
gi|172047869|sp|A5I7H9|RS11_CLOBH RecName: Full=30S ribosomal protein S11
gi|226708348|sp|B1IGC7|RS11_CLOBK RecName: Full=30S ribosomal protein S11
gi|148290878|emb|CAL85014.1| 30S ribosomal protein S11 [Clostridium botulinum A str. ATCC 3502]
gi|152930276|gb|ABS35776.1| 30S ribosomal protein S11 [Clostridium botulinum A str. ATCC 19397]
gi|152932457|gb|ABS37956.1| 30S ribosomal protein S11 [Clostridium botulinum A str. Hall]
gi|169119525|gb|ACA43361.1| 30S ribosomal protein S11 [Clostridium botulinum B1 str. Okra]
Length = 132
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|288919688|ref|ZP_06414015.1| ribosomal protein S11 [Frankia sp. EUN1f]
gi|288348877|gb|EFC83127.1| ribosomal protein S11 [Frankia sp. EUN1f]
Length = 134
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++P+AAQ+A ++ + KA
Sbjct: 20 NVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPYAAQMAAENAARKA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 80 QEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGCRPPKRRRV 134
>gi|91984024|ref|YP_567110.1| ribosomal protein S11 [Vitis vinifera]
gi|224365678|ref|YP_002608405.1| ribosomal protein S11 [Vitis vinifera]
gi|122224045|sp|Q0ZIY6|RR11_VITVI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|91701682|gb|ABE47566.1| ribosomal protein S11 [Vitis vinifera]
gi|147801377|emb|CAN61510.1| hypothetical protein VITISV_000629 [Vitis vinifera]
gi|209954202|emb|CAQ77672.1| ribosomal protein S11 [Vitis vinifera]
gi|239764722|gb|ACS15193.1| ribosomal protein S11 [Vitis vinifera]
gi|290487502|gb|ADD30135.1| ribosomal protein S11 [Berberidopsis corallina]
Length = 138
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|187776602|ref|ZP_02993075.1| hypothetical protein CLOSPO_00116 [Clostridium sporogenes ATCC
15579]
gi|187775261|gb|EDU39063.1| hypothetical protein CLOSPO_00116 [Clostridium sporogenes ATCC
15579]
Length = 132
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNN+ +TITD GNT++W+S +GF GSRK++PFAAQ+A + + A
Sbjct: 18 NVEHGCAHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAKAA 77
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G G+GR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 78 MEHGLKSIEVYVKGPGSGREAAIRSLQAAGLEVTLIKDVTPIPHNGCRPPKRRRV 132
>gi|319955880|ref|YP_004167143.1| SSU ribosomal protein s11p [Nitratifractor salsuginis DSM 16511]
gi|319418284|gb|ADV45394.1| SSU ribosomal protein S11P [Nitratifractor salsuginis DSM 16511]
Length = 124
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ + +K++ G ++ +TFNNT IT+TD GN + WSS +GF GS+K++P+AAQ A +
Sbjct: 3 KKKIKKSVARGVVYIAATFNNTVITVTDEMGNVLTWSSAGALGFKGSKKSTPYAAQQAVE 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRR 127
D +KA+ +G+ + +KV G G+GRD+A++++ AI G ++ D+T + HNGCRP K+R
Sbjct: 63 DAMSKAKEYGIKEVGIKVQGPGSGRDTAVKSVGAIEGIRVIWFKDITPLPHNGCRPPKKR 122
Query: 128 RI 129
R+
Sbjct: 123 RV 124
>gi|162456221|ref|YP_001618588.1| hypothetical protein sce7938 [Sorangium cellulosum 'So ce 56']
gi|161166803|emb|CAN98108.1| rpsK [Sorangium cellulosum 'So ce 56']
Length = 136
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 69/115 (60%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G AH+ STFNNT +TITD +GN IAWSS GF GSRK++PFAAQ+A ++ + +A
Sbjct: 22 NVSAGIAHIQSTFNNTVVTITDINGNAIAWSSAGARGFKGSRKSTPFAAQLAAEEAARRA 81
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM S+ V V G GAGR+SALRAL+ GF + I DVT I HNGCRP KRRR+
Sbjct: 82 QEHGMRSVAVFVKGPGAGRESALRALQTAGFKVTLIRDVTPIPHNGCRPPKRRRV 136
>gi|114107165|ref|YP_740150.1| ribosomal protein S11 [Daucus carota]
gi|122239959|sp|Q0G9S9|RR11_DAUCA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|113200940|gb|ABI32456.1| ribosomal protein S11 [Daucus carota]
gi|156573730|gb|ABU85197.1| ribosomal protein S11 [Anethum graveolens]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKTIPRIGSRKNGRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487494|gb|ADD30131.1| ribosomal protein S11 [Nerium oleander]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRIGSRRNGRIGARKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|188584863|ref|YP_001916408.1| SSU ribosomal protein S11P [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|226708391|sp|B2A4P8|RS11_NATTJ RecName: Full=30S ribosomal protein S11
gi|179349550|gb|ACB83820.1| SSU ribosomal protein S11P [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 131
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG A + STFNNT + ITD GNT+AWSS GF GSRK +P+AAQ+A + + A
Sbjct: 17 NIESGIATINSTFNNTLVNITDSDGNTMAWSSSGACGFKGSRKGTPYAAQIAAETAAKTA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +EV+V G G+GR++A+R+L+A G I +I D+T I HNGCRP KRRR+
Sbjct: 77 MEDGLKGVEVRVKGPGSGREAAIRSLQAAGLEINAIKDITPIPHNGCRPPKRRRV 131
>gi|19704620|ref|NP_604182.1| 30S ribosomal protein S11 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|237742280|ref|ZP_04572761.1| SSU ribosomal protein S11P [Fusobacterium sp. 4_1_13]
gi|237744173|ref|ZP_04574654.1| SSU ribosomal protein S11P [Fusobacterium sp. 7_1]
gi|256027712|ref|ZP_05441546.1| 30S ribosomal protein S11 [Fusobacterium sp. D11]
gi|256845559|ref|ZP_05551017.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_36A2]
gi|260494241|ref|ZP_05814372.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_33]
gi|289765671|ref|ZP_06525049.1| SSU ribosomal protein S11P [Fusobacterium sp. D11]
gi|294785152|ref|ZP_06750440.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_27]
gi|296329033|ref|ZP_06871539.1| 30S ribosomal protein S11 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|48474501|sp|Q8RE42|RS11_FUSNN RecName: Full=30S ribosomal protein S11
gi|19714920|gb|AAL95481.1| SSU ribosomal protein S11P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|229429928|gb|EEO40140.1| SSU ribosomal protein S11P [Fusobacterium sp. 4_1_13]
gi|229431402|gb|EEO41614.1| SSU ribosomal protein S11P [Fusobacterium sp. 7_1]
gi|256719118|gb|EEU32673.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_36A2]
gi|260198387|gb|EEW95903.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_33]
gi|289717226|gb|EFD81238.1| SSU ribosomal protein S11P [Fusobacterium sp. D11]
gi|294486866|gb|EFG34228.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_27]
gi|296153837|gb|EFG94649.1| 30S ribosomal protein S11 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 129
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT + ITD G ++W S GF G++K +P
Sbjct: 1 MAKKTVAKIKKKSKNIPNGVAHIHSTFNNTIVAITDVDGKVVSWKSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVKV G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAQIAMENGMRKVEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|296105900|ref|YP_003617600.1| small subunit ribosomal protein S11 [Legionella pneumophila 2300/99
Alcoy]
gi|295647801|gb|ADG23648.1| small subunit ribosomal protein S11 [Legionella pneumophila 2300/99
Alcoy]
Length = 114
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/113 (48%), Positives = 75/113 (66%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ ++FNNT +T TD GN + W++ GF GSRK++P+AAQVAT+ +A A+
Sbjct: 2 SDGIVHIHASFNNTIVTFTDRQGNALCWATSGGSGFRGSRKSTPYAAQVATERAAAVAKE 61
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+GM S+ V V G G GR+S +R L F IV I DVT I HNGC+P K+RR+
Sbjct: 62 YGMKSVAVFVHGPGPGRESTIRELITQDFKIVEITDVTGIPHNGCKPPKKRRV 114
>gi|330718948|ref|ZP_08313548.1| 30S ribosomal protein S11 [Leuconostoc fallax KCTC 3537]
Length = 128
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT I ITD GN ++WSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIETGVAHIHSTFNNTIIMITDVQGNAVSWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A M ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQLAAEAAAKSAMEQNMRTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|261884952|ref|ZP_06008991.1| 30S ribosomal protein S11 [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 130
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RKNI G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRIVIKKKIVRKNIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ + G ++ + D+T +AHN
Sbjct: 61 YAAQQAVEDAMNKAKEHGIKEVGIKVQGPGSGRETAVKSIGGVEGIKVLYLKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|187251796|ref|YP_001876278.1| 30S ribosomal protein S11 [Elusimicrobium minutum Pei191]
gi|186971956|gb|ACC98941.1| Ribosomal protein S11 [Elusimicrobium minutum Pei191]
Length = 142
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/113 (48%), Positives = 74/113 (65%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ +FNNT +TI+D GNT+ WSS GF GS+K++PFAAQ+ KA +
Sbjct: 30 AFGTAHIYCSFNNTIVTISDDKGNTLIWSSAGSHGFKGSKKSTPFAAQITCSKVGEKAVS 89
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM + V+V G G GR++A+RAL+ G + +I DVT I HNGCRP K RR+
Sbjct: 90 LGMREVTVRVCGPGQGRETAVRALQQAGLNVAAIRDVTPIPHNGCRPPKARRV 142
>gi|260907115|ref|ZP_05915437.1| SSU ribosomal protein S11P [Brevibacterium linens BL2]
Length = 134
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 92/127 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R + +KNIV+G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P+
Sbjct: 7 AATVRKPRRKLKKNIVAGQAHIKSTFNNTIVSITDPTGAVISWASSGEVGFKGSRKSTPY 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + +I DVT + NGC
Sbjct: 67 AAQMAAESAARRAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLELGTIQDVTPVPFNGC 126
Query: 122 RPRKRRR 128
RP KRRR
Sbjct: 127 RPTKRRR 133
>gi|91208934|ref|YP_538969.1| ribosomal protein S11 [Gossypium hirsutum]
gi|119368532|ref|YP_913220.1| ribosomal protein S11 [Gossypium barbadense]
gi|325210962|ref|YP_004286037.1| ribosomal protein S11 [Gossypium thurberi]
gi|91207752|sp|Q2L937|RR11_GOSHI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|125987663|sp|A0ZZ68|RR11_GOSBA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|85687448|gb|ABC73660.1| ribosomal protein S11 [Gossypium hirsutum]
gi|119224894|dbj|BAF41280.1| Ribosomal protein S11 [Gossypium barbadense]
gi|290775824|gb|ADD62320.1| ribosomal protein S11 [Gossypium thurberi]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K ++ + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPKVGSRRNGRSSARKSARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487514|gb|ADD30141.1| ribosomal protein S11 [Heuchera sanguinea]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + + G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRLPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|163752893|ref|ZP_02160017.1| 30S ribosomal protein S11 [Kordia algicida OT-1]
gi|161326625|gb|EDP97950.1| 30S ribosomal protein S11 [Kordia algicida OT-1]
Length = 129
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 80/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS + R+ G AHV ++FNN I++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKSSKSTKKRKVIVESVGEAHVTASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A +D S A G+ ++V V G G GR+SA+R + G + I DVT + HNG
Sbjct: 61 YAAQTAAEDASRVAHEAGLRKVKVYVKGPGNGRESAIRTIHNAGIEVTEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|50346816|ref|YP_053187.1| ribosomal protein S11 [Nymphaea alba]
gi|62287433|sp|Q6EW19|RR11_NYMAL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|50250361|emb|CAF28627.1| ribosomal protein S11 [Nymphaea alba]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 71/113 (62%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G HV ++FNNT +T+TDP G ++WSS GF G+R+ +PFAAQ A + +
Sbjct: 26 PIGVIHVQASFNNTIVTVTDPQGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVD 85
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 86 QGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGCRPPKKRRV 138
>gi|224167146|ref|XP_002339001.1| predicted protein [Populus trichocarpa]
gi|222874192|gb|EEF11323.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 74/127 (58%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF +R+ +PFA
Sbjct: 12 KNGRISSRKNARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGACGFRRTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|225873052|ref|YP_002754511.1| ribosomal protein S11 [Acidobacterium capsulatum ATCC 51196]
gi|225793115|gb|ACO33205.1| ribosomal protein S11 [Acidobacterium capsulatum ATCC 51196]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 62/119 (52%), Positives = 85/119 (71%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
RERKN+ G + ++FNNT +TITD GNT++W S +GF GSRK +PFAAQ A +
Sbjct: 20 RERKNVPYGLVFIQASFNNTIVTITDGQGNTLSWKSSGSLGFRGSRKGTPFAAQQAAINA 79
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ A++HG+ S++V+VSG G+GR+SA+RAL G + SI D T + HNGCRP KRRR+
Sbjct: 80 ANMARDHGLRSVDVRVSGPGSGRESAVRALAVAGLEVRSIRDTTPVPHNGCRPPKRRRV 138
>gi|11497559|ref|NP_054967.1| ribosomal protein S11 [Spinacia oleracea]
gi|19855077|sp|P06506|RR11_SPIOL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|7636140|emb|CAB88760.1| ribosomal protein S11 [Spinacia oleracea]
Length = 138
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + I G HV ++FNNT +T+TD G ++W+S G
Sbjct: 1 MAKPIPKIGSRRNGRISSRKSARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+++ +PFAAQ A + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|258591341|emb|CBE67640.1| 30S ribosomal subunit protein S11 [NC10 bacterium 'Dutch sediment']
Length = 136
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 72/136 (52%), Positives = 89/136 (65%), Gaps = 7/136 (5%)
Query: 1 MPKSPSRIR-------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFS 53
M + R +E KNI G A V +TFNNT +TITD GN IAW+S VGF
Sbjct: 1 MAEETKPRRPAGRAGGRKEAKNIAHGIACVQATFNNTIVTITDVAGNVIAWASAGSVGFK 60
Query: 54 GSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDV 113
GSRK++PFAAQ A D + KA + GM ++V V G GAGR++A+RAL+A G IV+I DV
Sbjct: 61 GSRKSTPFAAQRAADSAAQKAMSQGMKEVKVFVKGPGAGREAAIRALQAAGMEIVAIKDV 120
Query: 114 TMIAHNGCRPRKRRRI 129
T I HNGCRP KRRR+
Sbjct: 121 TPIPHNGCRPSKRRRV 136
>gi|38233156|ref|NP_938923.1| 30S ribosomal protein S11 [Corynebacterium diphtheriae NCTC 13129]
gi|59798750|sp|Q6NJ65|RS11_CORDI RecName: Full=30S ribosomal protein S11
gi|38199415|emb|CAE49058.1| 30S ribosomal protein S11 [Corynebacterium diphtheriae]
Length = 134
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 63/121 (52%), Positives = 87/121 (71%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R +KN+ G A++ STFNNT ++ITDP G IAW+S VGF GSRK++PFAAQ+A +
Sbjct: 14 RRVVKKNVAQGHAYIKSTFNNTIVSITDPSGAVIAWASSGHVGFKGSRKSTPFAAQLAAE 73
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + KA +HGM ++V V G G+GR++A+R+L+A G + SI DVT NGCRP KRRR
Sbjct: 74 NAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVTSISDVTPQPFNGCRPPKRRR 133
Query: 129 I 129
+
Sbjct: 134 V 134
>gi|222823137|ref|YP_002574710.1| 30S ribosomal protein S11 [Campylobacter lari RM2100]
gi|254765373|sp|B9KEH4|RS11_CAMLR RecName: Full=30S ribosomal protein S11
gi|222538358|gb|ACM63459.1| 30S ribosomal protein S11 [Campylobacter lari RM2100]
Length = 130
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ A+ G + + D+T +AHN
Sbjct: 61 YAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGAMEGIKVTFLKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|269955461|ref|YP_003325250.1| 30S ribosomal protein S11 [Xylanimonas cellulosilytica DSM 15894]
gi|269304142|gb|ACZ29692.1| ribosomal protein S11 [Xylanimonas cellulosilytica DSM 15894]
Length = 135
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 91/128 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ R +++KN+ G+AH+ STFNNT ++ITDP G IAW+S VGF GSRK++PF
Sbjct: 8 AAGTRKPRRKDKKNVPLGQAHIKSTFNNTIVSITDPTGAVIAWASAGHVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT AHNG
Sbjct: 68 AAQLAAESAARRAQEHGVKKVDVFVKGPGSGRETAIRSLQATGLEVGSIQDVTPQAHNGV 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|158319570|ref|YP_001512077.1| 30S ribosomal protein S11 [Alkaliphilus oremlandii OhILAs]
gi|172048248|sp|A8MLG7|RS11_ALKOO RecName: Full=30S ribosomal protein S11
gi|158139769|gb|ABW18081.1| ribosomal protein S11 [Alkaliphilus oremlandii OhILAs]
Length = 133
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 59/115 (51%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G+AH+ STFNN+ IT+TD GN ++ +S +GF GSRK++P+AAQ+A + + A
Sbjct: 19 NIERGQAHIQSTFNNSIITLTDMQGNALSQASAGQLGFKGSRKSTPYAAQMAAETAAKAA 78
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++EV V G GAGR++A+R+L+A G + I DVT I HNGCRP KRRR+
Sbjct: 79 MEHGLKTVEVYVKGPGAGREAAIRSLQAAGLEVNLIKDVTPIPHNGCRPPKRRRV 133
>gi|313184026|ref|YP_004021183.1| ribosomal protein S11 [Castanea mollissima]
gi|290487522|gb|ADD30145.1| ribosomal protein S11 [Quercus nigra]
gi|309321553|gb|ADO65093.1| ribosomal protein S11 [Castanea mollissima]
Length = 138
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPAPRIGSRRNGRIGLRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGVILSFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|139389297|ref|YP_001123063.1| ribosomal protein S11 [Aethionema grandiflorum]
gi|139390381|ref|YP_001122979.1| ribosomal protein S11 [Aethionema cordifolium]
gi|152060510|sp|A4QJE8|RR11_AETCO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060511|sp|A4QJN2|RR11_AETGR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134286174|dbj|BAF49803.1| ribosomal protein S11 [Aethionema cordifolium]
gi|134286259|dbj|BAF49887.1| ribosomal protein S11 [Aethionema grandiflorum]
Length = 138
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + G+ EV++ G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRAVVDQGIQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|313183855|ref|YP_004021698.1| ribosomal protein S11 [Prunus persica]
gi|309321467|gb|ADO65008.1| ribosomal protein S11 [Prunus persica]
Length = 138
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + + G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPKIGSRRNRRIGSRKNARRVPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGACG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|313199735|ref|YP_004021349.1| ribosomal protein S11 [Theobroma cacao]
gi|309321299|gb|ADO64842.1| ribosomal protein S11 [Theobroma cacao]
gi|328924812|gb|ADO64923.2| ribosomal protein S11 [Theobroma cacao]
Length = 138
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K ++ + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPKVGSRRNGRSGARKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|13518471|ref|NP_084830.1| ribosomal protein S11 [Lotus japonicus]
gi|48474946|sp|Q9BBQ3|RR11_LOTJA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|13359012|dbj|BAB33229.1| ribosomal protein S11 [Lotus japonicus]
Length = 138
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 74/127 (58%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNARSGSRKHLRKIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + I DVT + HNGCR
Sbjct: 72 AQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFIRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
K+RR+
Sbjct: 132 SPKKRRV 138
>gi|300857807|ref|YP_003782790.1| 30S ribosomal protein S11 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685261|gb|ADK28183.1| 30S ribosomal protein S11 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205542|gb|ADL09884.1| 30S ribosomal protein S11 [Corynebacterium pseudotuberculosis C231]
gi|302330097|gb|ADL20291.1| 30S ribosomal protein S11 [Corynebacterium pseudotuberculosis 1002]
gi|308275778|gb|ADO25677.1| 30S ribosomal protein S11 [Corynebacterium pseudotuberculosis I19]
Length = 134
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 63/124 (50%), Positives = 87/124 (70%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ G A++ STFNNT ++ITDP G IAW+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVAQGHAYIKSTFNNTIVSITDPSGAVIAWASSGHVGFKGSRKSTPFAAQL 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +HGM ++V V G G+GR++A+R+L+A G + SI DVT NGCRP K
Sbjct: 71 AAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVTSISDVTPQPFNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|290487488|gb|ADD30128.1| ribosomal protein S11 [Lonicera japonica]
Length = 138
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++F+NT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRIGSHRKGRFGSRKSTRRIPKGVIHVQASFHNTIVTVTDVRGQVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G R+ +PFAAQ + + GM V + G G GRD+ALRA+R G + I
Sbjct: 61 FRGRRRGTPFAAQTIAGNAIRTVVDQGMKRANVMIKGPGLGRDAALRAIRRSGILLTFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP KRRR+
Sbjct: 121 DVTPLPHNGCRPPKRRRV 138
>gi|33862092|ref|NP_893653.1| 30S ribosomal protein S11 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|59798848|sp|Q7UZW5|RS11_PROMP RecName: Full=30S ribosomal protein S11
gi|33634310|emb|CAE19995.1| 30S ribosomal protein S11 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 130
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 78/115 (67%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ +G H+ STFNNT ++ITD G+ I+WSS GF G+RK +PFAAQ A + + +A
Sbjct: 16 NVPNGVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAAKRA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM ++V V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 76 LDQGMRQIKVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|124026687|ref|YP_001015802.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. NATL1A]
gi|152060806|sp|A2C4X8|RS11_PROM1 RecName: Full=30S ribosomal protein S11
gi|123961755|gb|ABM76538.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. NATL1A]
Length = 130
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 57/116 (49%), Positives = 77/116 (66%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ +G H+ STFNNT ++ITD G I+WSS GF G+RK +PFAAQ A + + +
Sbjct: 15 RNVPNGVVHIQSTFNNTIVSITDTSGEVISWSSAGASGFKGARKGTPFAAQTAAELAARR 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A GM +EV V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 75 ALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|290487484|gb|ADD30126.1| ribosomal protein S11 [Ehretia acuminata]
Length = 138
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++W+S G
Sbjct: 1 MAKAMPRIGSRRNGRIGSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|262066972|ref|ZP_06026584.1| 30S ribosomal protein S11 [Fusobacterium periodonticum ATCC 33693]
gi|291379320|gb|EFE86838.1| 30S ribosomal protein S11 [Fusobacterium periodonticum ATCC 33693]
Length = 129
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT +TITD G I+W S F G++K +P
Sbjct: 1 MAKKTVAKIKKKSKNIPNGVAHIHSTFNNTIVTITDVDGKVISWKSGGTSNFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVKV G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAQIAMENGMRKVEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|259506743|ref|ZP_05749643.1| 30S ribosomal protein S11 [Corynebacterium efficiens YS-314]
gi|259165684|gb|EEW50238.1| 30S ribosomal protein S11 [Corynebacterium efficiens YS-314]
Length = 114
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 60/113 (53%), Positives = 84/113 (74%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G A++ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ+A ++ + KA +
Sbjct: 2 AQGHAYIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQMAAENAARKAMD 61
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP KRRR+
Sbjct: 62 HGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTPQPHNGCRPPKRRRV 114
>gi|121720646|ref|YP_001001567.1| ribosomal protein S11 [Nuphar advena]
gi|69216834|gb|AAZ03975.1| ribosomal protein S11 [Nuphar advena]
gi|84682237|gb|ABC60491.1| ribosomal protein S11 [Nuphar advena]
Length = 138
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 71/113 (62%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G HV ++FNNT +T+TDP G ++WSS GF G+R+ +PFAAQ A + +
Sbjct: 26 PIGVIHVQASFNNTIVTVTDPQGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVVD 85
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 86 QGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGCRPPKKRRV 138
>gi|319948697|ref|ZP_08022818.1| 30S ribosomal protein S11 [Dietzia cinnamea P4]
gi|319437599|gb|EFV92598.1| 30S ribosomal protein S11 [Dietzia cinnamea P4]
Length = 114
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 60/113 (53%), Positives = 84/113 (74%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G+AH+ STFNNT ++ITDP G +AW+S VGF GSRK++PFAAQ+A ++ + KAQ
Sbjct: 2 PLGQAHIKSTFNNTIVSITDPSGGVLAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQE 61
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 62 HGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGCRPPKRRRV 114
>gi|257069481|ref|YP_003155736.1| 30S ribosomal protein S11P [Brachybacterium faecium DSM 4810]
gi|256560299|gb|ACU86146.1| SSU ribosomal protein S11P [Brachybacterium faecium DSM 4810]
Length = 134
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +++KNIV+G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++P+AA
Sbjct: 9 AARKPRRKDKKNIVNGQAHIKSTFNNTIVSITDPTGAVISWASAGQVGFKGSRKSTPYAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HG+ ++V V G G+GR++A+R+L A G + SI DVT HNG RP
Sbjct: 69 QMAAEAAARQAQEHGLKKVDVFVKGPGSGRETAIRSLTATGLEVGSIQDVTPQPHNGTRP 128
Query: 124 RKRRRI 129
KRRR+
Sbjct: 129 AKRRRV 134
>gi|227549866|ref|ZP_03979915.1| ribosomal protein S11 [Corynebacterium lipophiloflavum DSM 44291]
gi|227078121|gb|EEI16084.1| ribosomal protein S11 [Corynebacterium lipophiloflavum DSM 44291]
Length = 134
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 88/124 (70%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ +G A++ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVAAGHAYIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQM 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA HGM ++V V G G+GR++A+R+L+A G + SI DVT NGCRP K
Sbjct: 71 AAENAARKAMEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSISDVTPQPFNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|158317766|ref|YP_001510274.1| 30S ribosomal protein S11 [Frankia sp. EAN1pec]
gi|226708373|sp|A8LB07|RS11_FRASN RecName: Full=30S ribosomal protein S11
gi|158113171|gb|ABW15368.1| ribosomal protein S11 [Frankia sp. EAN1pec]
Length = 134
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAAQ+A ++ + KA
Sbjct: 20 NVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPFAAQMAAENAARKA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 80 QEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGCRPPKRRRV 134
>gi|160902230|ref|YP_001567811.1| ribosomal protein S11 [Petrotoga mobilis SJ95]
gi|189040425|sp|A9BFZ2|RS11_PETMO RecName: Full=30S ribosomal protein S11
gi|160359874|gb|ABX31488.1| ribosomal protein S11 [Petrotoga mobilis SJ95]
Length = 129
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ R +++ H+ STFNNT +T+TD G I WSS VGF G++K +
Sbjct: 1 MAKGGAKQRTKKKKAAPEKAAIHIHSTFNNTIVTLTDTEGRPIIWSSGGNVGFKGAKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PF+AQ+A+D + +A N G+ ++V V G G+GR+SA+RAL+A G + SI DVT I HN
Sbjct: 61 PFSAQMASDKVAKEALNLGVKRVDVYVKGPGSGRESAIRALQAAGLNVESIKDVTPIPHN 120
Query: 120 GCRPRKRR 127
GCRP+K+R
Sbjct: 121 GCRPKKKR 128
>gi|118443263|ref|YP_877225.1| 30S ribosomal protein S11 [Clostridium novyi NT]
gi|152060596|sp|A0PXX3|RS11_CLONN RecName: Full=30S ribosomal protein S11
gi|118133719|gb|ABK60763.1| ribosomal protein S11 [Clostridium novyi NT]
Length = 131
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 64/115 (55%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G AH+ STFNN+ +TITD GN ++WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 17 NIEHGCAHIKSTFNNSIVTITDAVGNALSWSSAGALGFKGSRKSTPFAAQMAAETAATAA 76
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S+EV V G GAGR++A+R+L+A G I I DVT I HNGCRP KRRR+
Sbjct: 77 MEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEITLIKDVTPIPHNGCRPPKRRRV 131
>gi|255326870|ref|ZP_05367946.1| 30S ribosomal protein S11 [Rothia mucilaginosa ATCC 25296]
gi|283457575|ref|YP_003362158.1| 30S ribosomal protein S11 [Rothia mucilaginosa DY-18]
gi|255296087|gb|EET75428.1| 30S ribosomal protein S11 [Rothia mucilaginosa ATCC 25296]
gi|283133573|dbj|BAI64338.1| ribosomal protein S11 [Rothia mucilaginosa DY-18]
Length = 135
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 93/128 (72%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ R + KNIV+G+AH+ STFNNT ++ITDP G I+WSS +GF GSRK++P+
Sbjct: 8 AAARKTNRRKVSKNIVAGQAHIKSTFNNTIVSITDPTGAVISWSSAGDMGFKGSRKSTPY 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +A+ HG+ ++V V G G+GR++A+R+L+A G + SI DVT +AHNGC
Sbjct: 68 AAQLAAEAAANRAKEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPVAHNGC 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|227487076|ref|ZP_03917392.1| ribosomal protein S11 [Corynebacterium glucuronolyticum ATCC 51867]
gi|227541760|ref|ZP_03971809.1| ribosomal protein S11 [Corynebacterium glucuronolyticum ATCC 51866]
gi|227093150|gb|EEI28462.1| ribosomal protein S11 [Corynebacterium glucuronolyticum ATCC 51867]
gi|227182466|gb|EEI63438.1| ribosomal protein S11 [Corynebacterium glucuronolyticum ATCC 51866]
Length = 133
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R ++KN+ G A++ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+
Sbjct: 10 RTGRRIQKKNVAQGHAYIKSTFNNTIVSITDPSGAVISWASSGHVGFKGSRKSTPFAAQM 69
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +HGM ++V V G G+GR++A+R+L+A G + S+ DVT HNGCRP K
Sbjct: 70 AAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVTSMSDVTPQPHNGCRPPK 129
Query: 126 RRRI 129
RRR+
Sbjct: 130 RRRV 133
>gi|115605054|ref|YP_784506.1| ribosomal protein S11 [Piper cenocladum]
gi|122164329|sp|Q06GM7|RR11_PIPCE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|112253783|gb|ABI14504.1| ribosomal protein S11 [Piper cenocladum]
Length = 138
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKAGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGLLLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|290487524|gb|ADD30146.1| ribosomal protein S11 [Staphylea colchica]
Length = 138
Score = 149 bits (378), Expect = 7e-35, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKLIPRIGSRRNARIGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|48474762|sp|O98461|RR11_SPIMX RecName: Full=30S ribosomal protein S11, chloroplastic
gi|4007877|gb|AAC95317.1| ribosomal protein S11 [Spirogyra maxima]
Length = 130
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ ++I + ++ HV ++FNNT +T+TD G I+ S GF G++KN+
Sbjct: 1 MAKTANKINIRKVKRKTPKAIIHVQASFNNTIVTVTDVQGQVISSCSAGACGFKGAKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + G+ EV +SG G GRD+ALRA+R G T+ + DVT + HN
Sbjct: 61 PFAAQTAAENAIRLLIDQGLKQAEVMISGPGRGRDTALRAIRNSGITLSLVRDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR K RR+
Sbjct: 121 GCRRPKTRRV 130
>gi|313199606|ref|YP_004021221.1| ribosomal protein S11 [Isoetes flaccida]
gi|291575335|gb|ADE18048.1| ribosomal protein S11 [Isoetes flaccida]
Length = 132
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
MP+ +I R +R I G H+ ++FNNT +T+TD G ++WSS GF G++K
Sbjct: 1 MPRLIRKISNLRGGKRGRIPKGVIHIRASFNNTIVTVTDVRGQVVSWSSAGACGFKGAKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ A ++ + GM EV V+G G GRD+ALRA+ G + + D+T +
Sbjct: 61 STPFAAQTAAENAIRTLIDRGMGQAEVVVTGPGPGRDTALRAICGSGSALSLVRDITPMP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+R I
Sbjct: 121 HNGCRPPKKRCI 132
>gi|149179436|ref|ZP_01857990.1| 30S ribosomal protein S11 [Planctomyces maris DSM 8797]
gi|148841747|gb|EDL56156.1| 30S ribosomal protein S11 [Planctomyces maris DSM 8797]
Length = 126
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 52/114 (45%), Positives = 79/114 (69%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I A++ +TFNNT +TITD +G+ + W++ GF GSRK++PFAAQ A + C+ KA
Sbjct: 13 ITKAVAYIKATFNNTTVTITDLNGDVLCWATAGTSGFKGSRKSTPFAAQRAAEICAEKAS 72
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +E++V G G+GR+SA+ L+ G +I +I D+T + HNGCRP K+RR+
Sbjct: 73 KFGVKEMEIRVKGPGSGRESAITGLQTAGISIRAIEDITPLPHNGCRPPKKRRV 126
>gi|290487518|gb|ADD30143.1| ribosomal protein S11 [Oxalis latifolia]
Length = 138
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +RI + + I G HV ++FNNT +TITD G I+WSS G
Sbjct: 1 MAKPIARIGSRRNGRIGSRKNARRIPKGVIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVVIKGPGLGRDAALRAIRRSGILLNFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|108804949|ref|YP_644886.1| 30S ribosomal protein S11 [Rubrobacter xylanophilus DSM 9941]
gi|123177179|sp|Q1AU54|RS11_RUBXD RecName: Full=30S ribosomal protein S11
gi|108766192|gb|ABG05074.1| SSU ribosomal protein S11P [Rubrobacter xylanophilus DSM 9941]
Length = 135
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 80/117 (68%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
RKNI + H+ S+FNNT I++TD GN IAW S +GF GSRK++P+AAQ+ + +
Sbjct: 18 VRKNISTAVVHIKSSFNNTIISVTDQEGNVIAWESAGSMGFKGSRKSTPYAAQMTAESAA 77
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA HG+ ++++V G G+GRD A R +A+G ++SI DVT HNGCRP KRRR
Sbjct: 78 NKAMEHGVKRVDIQVKGHGSGRDMAARTFQAMGIEVLSIKDVTGQPHNGCRPPKRRR 134
>gi|154174863|ref|YP_001409133.1| 30S ribosomal protein S11 [Campylobacter curvus 525.92]
gi|166231809|sp|A7H0Z1|RS11_CAMC5 RecName: Full=30S ribosomal protein S11
gi|112802251|gb|EAT99595.1| ribosomal protein S11 [Campylobacter curvus 525.92]
Length = 130
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RK+I G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKIVKKKVVRKSIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ A+ G + + D+T +AHN
Sbjct: 61 YAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGAVEGIKVTFLKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|149390300|ref|YP_001294131.1| ribosomal protein S11 [Chloranthus spicatus]
gi|172048691|sp|A6MMF5|RR11_CHLSC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|146744220|gb|ABQ43292.1| ribosomal protein S11 [Chloranthus spicatus]
Length = 138
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFA
Sbjct: 12 KNGRISSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGLLLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|172040039|ref|YP_001799753.1| 30S ribosomal protein S11 [Corynebacterium urealyticum DSM 7109]
gi|259494618|sp|B1VEY0|RS11_CORU7 RecName: Full=30S ribosomal protein S11
gi|171851343|emb|CAQ04319.1| 30S ribosomal protein S11 [Corynebacterium urealyticum DSM 7109]
Length = 135
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 60/117 (51%), Positives = 84/117 (71%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+KN+ G A++ STFNNT ++ITDP G+ I+W+S VGF GSRK++PFAAQ+A + +
Sbjct: 19 KKNVTQGHAYIKSTFNNTIVSITDPKGHVISWASSGQVGFKGSRKSTPFAAQLAAESAAR 78
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA HGM ++V V G G+GR++A+R+L G + +I DVT HNGCRP KRRR+
Sbjct: 79 KAMEHGMKKVDVFVKGPGSGRETAIRSLSTAGLEVGTIADVTPQPHNGCRPPKRRRV 135
>gi|19551797|ref|NP_599799.1| 30S ribosomal protein S11 [Corynebacterium glutamicum ATCC 13032]
gi|62389452|ref|YP_224854.1| 30S ribosomal protein S11 [Corynebacterium glutamicum ATCC 13032]
gi|145294733|ref|YP_001137554.1| 30S ribosomal protein S11 [Corynebacterium glutamicum R]
gi|45593562|sp|Q8NSV5|RS11_CORGL RecName: Full=30S ribosomal protein S11
gi|152060586|sp|A4QBQ5|RS11_CORGB RecName: Full=30S ribosomal protein S11
gi|21323327|dbj|BAB97955.1| Ribosomal protein S11 [Corynebacterium glutamicum ATCC 13032]
gi|41324786|emb|CAF19268.1| RIBOSOMAL PROTEIN S11 [Corynebacterium glutamicum ATCC 13032]
gi|140844653|dbj|BAF53652.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 134
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/124 (50%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ +G A++ STFNNT ++ITD +G I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVANGNAYIKSTFNNTIVSITDTNGAVISWASSGHVGFKGSRKSTPFAAQM 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +HGM ++V V G G+GR++A+R+L+A G I SI DVT HNGCRP K
Sbjct: 71 AAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEIGSISDVTPQPHNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|326909425|ref|YP_004327695.1| ribosomal protein S11 [Hevea brasiliensis]
gi|308523539|gb|ADO33589.1| ribosomal protein S11 [Hevea brasiliensis]
Length = 138
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPLPKIGSRRNGRIGSRKNSRKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSSILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|322436520|ref|YP_004218732.1| 30S ribosomal protein S11 [Acidobacterium sp. MP5ACTX9]
gi|321164247|gb|ADW69952.1| 30S ribosomal protein S11 [Acidobacterium sp. MP5ACTX9]
Length = 142
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 87/126 (69%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + RERKN+ G + ++FNNT +TITD GNTI+W S +GF GSRK +PFAA
Sbjct: 17 KGKKFKKRERKNVPYGLVFIQASFNNTIVTITDQTGNTISWKSSGSLGFRGSRKGTPFAA 76
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q A + A++HG+ S++V+VSG G+GR+SA+RAL G + SI DVT + HNGCRP
Sbjct: 77 QQAAVGAANAARDHGLRSVDVRVSGPGSGRESAIRALATAGIDVRSIRDVTPMPHNGCRP 136
Query: 124 RKRRRI 129
KRRR+
Sbjct: 137 PKRRRV 142
>gi|290487482|gb|ADD30125.1| ribosomal protein S11 [Dillenia indica]
Length = 138
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFA
Sbjct: 12 KNERISSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQTAVGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|257459218|ref|ZP_05624337.1| 30S ribosomal protein S11 [Campylobacter gracilis RM3268]
gi|257443603|gb|EEV18727.1| 30S ribosomal protein S11 [Campylobacter gracilis RM3268]
Length = 130
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + RKNI G ++ +TFNNT IT+TD GN IAWSS + F GS+K++P
Sbjct: 1 MAQKKVVKKKTVRKNIAKGIVYISATFNNTMITVTDEMGNAIAWSSAGALNFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D +KA+ HG+ + VKV G G+GR++A++++ ++ G + D+T +AHN
Sbjct: 61 YAAQQAVEDALSKAKEHGIKEVGVKVQGPGSGRETAVKSVGSVEGIKVTYFKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|254412160|ref|ZP_05025935.1| ribosomal protein S11 [Microcoleus chthonoplastes PCC 7420]
gi|196181126|gb|EDX76115.1| ribosomal protein S11 [Microcoleus chthonoplastes PCC 7420]
Length = 130
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 59/116 (50%), Positives = 82/116 (70%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ +G A + STFNNT +TI+D G+ ++W+S GF G++K +PFAAQ A D+ + +
Sbjct: 15 RNVPNGMAFIQSTFNNTIVTISDTRGDVVSWASAGSSGFKGAKKGTPFAAQTAADNAARR 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A + GM +EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 75 AIDQGMRQIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 130
>gi|290487516|gb|ADD30142.1| ribosomal protein S11 [Liquidambar styraciflua]
Length = 138
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSCVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|290487508|gb|ADD30138.1| ribosomal protein S11 [Euonymus americanus]
Length = 138
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ ++ + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKTITKTSSRRNVRIGSRKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGTAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|72382945|ref|YP_292300.1| 30S ribosomal protein S11 [Prochlorococcus marinus str. NATL2A]
gi|91207668|sp|Q46IT1|RS11_PROMT RecName: Full=30S ribosomal protein S11
gi|72002795|gb|AAZ58597.1| SSU ribosomal protein S11P [Prochlorococcus marinus str. NATL2A]
Length = 130
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 57/116 (49%), Positives = 77/116 (66%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ +G H+ STFNNT ++ITD G I+WSS GF G+RK +PFAAQ A + + +
Sbjct: 15 RNVPNGVVHIQSTFNNTIVSITDTSGEVISWSSAGASGFKGARKGTPFAAQTAAELAARR 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A GM +EV V G G+GR++A+RAL+ G I I DVT + HNGCR KRRR+
Sbjct: 75 ALEQGMRQIEVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV 130
>gi|299138171|ref|ZP_07031351.1| 30S ribosomal protein S11 [Acidobacterium sp. MP5ACTX8]
gi|298600101|gb|EFI56259.1| 30S ribosomal protein S11 [Acidobacterium sp. MP5ACTX8]
Length = 141
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/119 (52%), Positives = 86/119 (72%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
RERKN+ G + ++FNNT +TITD GNT++W S +GF GSRK +PFAAQ A
Sbjct: 23 RERKNVPFGLVFIQASFNNTIVTITDQTGNTLSWKSSGSLGFRGSRKGTPFAAQQAAVGA 82
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ A++HG+ S++V+V+G G+GR+SA+RAL A G + SI DVT + HNGCRP KRRR+
Sbjct: 83 ANAARDHGLRSVDVRVAGPGSGRESAIRALAAAGIEVRSIRDVTPMPHNGCRPPKRRRV 141
>gi|289523342|ref|ZP_06440196.1| 30S ribosomal protein S11 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503034|gb|EFD24198.1| 30S ribosomal protein S11 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 130
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS R R+ K NI AH+ STFNNT I+ITD G + W+S VGF G+RK++
Sbjct: 1 MAKSTKRRTKRKEKKNINYAVAHIHSTFNNTIISITDKQGGVVGWASGGTVGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A + +AQ+HG++ ++V V G G GR+SA+R+L+A G I I D T I HN
Sbjct: 61 PYAAQMAAQVVAKQAQDHGVTEIDVVVKGPGPGRESAIRSLQAAGLQINMIKDATPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|149390474|ref|YP_001294303.1| ribosomal protein S11 [Illicium oligandrum]
gi|172048709|sp|A6MMX7|RR11_ILLOL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|147917427|gb|ABQ52551.1| ribosomal protein S11 [Illicium oligandrum]
Length = 138
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKNGRRISKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGARRGTPFAAQTAAGN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|307683579|dbj|BAJ19768.1| ribosomal protein S11 [Larix decidua]
Length = 130
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G HV ++FNNT +T+TD G ++WSS GF G+R+ +
Sbjct: 1 MSKTTRRIGSRRNEHRVLKGVIHVQASFNNTIVTVTDVRGQVLSWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + GM +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
G RP K+RR+
Sbjct: 121 GYRPPKKRRV 130
>gi|317046206|ref|YP_004072495.1| ribosomal protein S11 [Corynocarpus laevigata]
gi|309252923|gb|ADO60343.1| ribosomal protein S11 [Corynocarpus laevigata]
Length = 140
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 1 MPKSPSRIRNRER-----------KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV 49
M K RI +R + I G HV ++FNNT +T+TD G I+WSS
Sbjct: 1 MAKPIPRISSRRNGRIGSRKSTSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGT 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
GF G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G +
Sbjct: 61 CGFKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSF 120
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCRP K+RR+
Sbjct: 121 IRDVTPMPHNGCRPPKKRRV 140
>gi|326200312|gb|ADZ52351.1| ribosomal protein S11 [Asclepias syriaca]
Length = 138
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRIGSRRTGRIGSRKSTRRIPRGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G R+ +PFAAQ AT + + GM EV + G G GRD+ALRA+R G ++ +
Sbjct: 61 FKGPRRGTPFAAQTATSNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGISLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPLPHNGCRPPKKRRV 138
>gi|312199994|ref|YP_004020055.1| 30S ribosomal protein S11 [Frankia sp. EuI1c]
gi|311231330|gb|ADP84185.1| 30S ribosomal protein S11 [Frankia sp. EuI1c]
Length = 135
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++P+AAQ+A ++ + KA
Sbjct: 21 NVAHGHAHIKSTFNNTIVSITDPTGNVISWASAGHVGFKGSRKSTPYAAQMAAENAARKA 80
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 81 QEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPTPHNGCRPPKRRRV 135
>gi|313665552|ref|YP_004047423.1| 30S ribosomal protein S11 [Mycoplasma leachii PG50]
gi|312950044|gb|ADR24640.1| 30S ribosomal protein S11 [Mycoplasma leachii PG50]
Length = 129
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 59/128 (46%), Positives = 87/128 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M S+ + + +KNI G AH+ STFNNT +T++D GN ++WSS +GF GS+K++P
Sbjct: 1 MANPKSQAKKKIKKNIPKGIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ ++ + A ++G+ ++ V+V G G GRD+A+RAL+ G I SI D T I HNG
Sbjct: 61 YAAQLISEAAAKGAMDNGVKTVSVEVKGPGPGRDAAIRALQMAGLEITSIKDTTPIPHNG 120
Query: 121 CRPRKRRR 128
RPRKR R
Sbjct: 121 VRPRKRPR 128
>gi|225850761|ref|YP_002730995.1| 30S ribosomal protein S11 [Persephonella marina EX-H1]
gi|225645850|gb|ACO04036.1| 30S ribosomal protein S11 [Persephonella marina EX-H1]
Length = 129
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R + ++ + G AH+ +TFNNT +TITD GN + W+S GF G+RK++P
Sbjct: 1 MARR-RRTTKKVKRTVPYGIAHIQATFNNTIVTITDKEGNVLTWASGGTEGFKGTRKSTP 59
Query: 61 FAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ A + + +A GM +EV V G GAGR++A++ ++A+G I I DVT I HN
Sbjct: 60 YAAQKAAEKAAKRAMDEFGMKDIEVWVKGPGAGRETAIKTIQAVGLNIKVIKDVTPIPHN 119
Query: 120 GCRPRKRRRI 129
GCRP +RR+
Sbjct: 120 GCRPPSKRRV 129
>gi|237739947|ref|ZP_04570428.1| SSU ribosomal protein S11P [Fusobacterium sp. 2_1_31]
gi|294782961|ref|ZP_06748287.1| 30S ribosomal protein S11 [Fusobacterium sp. 1_1_41FAA]
gi|229421964|gb|EEO37011.1| SSU ribosomal protein S11P [Fusobacterium sp. 2_1_31]
gi|294481602|gb|EFG29377.1| 30S ribosomal protein S11 [Fusobacterium sp. 1_1_41FAA]
Length = 129
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT +TITD G I+W S F G++K +P
Sbjct: 1 MAKKTVAKIKKKSKNIPNGVAHIHSTFNNTIVTITDVDGKVISWKSGGTSNFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVKV G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAQIAMENGMRKIEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|134103233|ref|YP_001108894.1| 30S ribosomal protein S11 [Saccharopolyspora erythraea NRRL 2338]
gi|291007975|ref|ZP_06565948.1| 30S ribosomal protein S11 [Saccharopolyspora erythraea NRRL 2338]
gi|152060817|sp|A4FPJ4|RS11_SACEN RecName: Full=30S ribosomal protein S11
gi|133915856|emb|CAM05969.1| 30S ribosomal subunit protein S11 [Saccharopolyspora erythraea NRRL
2338]
Length = 134
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+AH+ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+A ++ + KA
Sbjct: 20 NVAHGQAHIKSTFNNTIVSITDPTGAVISWASAGHVGFKGSRKSTPFAAQMAAENAARKA 79
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 80 AEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPQPHNGCRPPKRRRV 134
>gi|60117162|ref|YP_209496.1| ribosomal protein S11 [Huperzia lucidula]
gi|62287392|sp|Q5SD26|RR11_HUPLU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|50659970|gb|AAT80692.1| ribosomal protein S11 [Huperzia lucidula]
Length = 132
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
MP+ ++ R ++ + G H+ ++FNNT +T+TD G ++WSS G G++K+
Sbjct: 1 MPRLIKKVGSLRRGKRGVPKGVIHIQASFNNTIVTVTDVRGQAVSWSSAGACGSRGTKKS 60
Query: 59 SPFAAQVATDDCSAKAQNH-GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+PFAAQ A ++ + GM E+ + G G GRD+A RA+R G + + D+T +
Sbjct: 61 TPFAAQTAAENAIRMLIDQGGMEQAEIIMKGPGPGRDTASRAIRKSGVVLSFVRDITPMP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 HNGCRPPKKRRV 132
>gi|94968280|ref|YP_590328.1| 30S ribosomal protein S11 [Candidatus Koribacter versatilis
Ellin345]
gi|123256692|sp|Q1IS96|RS11_ACIBL RecName: Full=30S ribosomal protein S11
gi|94550330|gb|ABF40254.1| SSU ribosomal protein S11P [Candidatus Koribacter versatilis
Ellin345]
Length = 142
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/114 (53%), Positives = 82/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AH+ ++FNNT +TI+DP GN ++W S +GF GSRK +PFAAQ A + A+
Sbjct: 29 VPHGLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSRKGTPFAAQQAAMTAANMAR 88
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+HGM SL+V+V+G G+GR+SA+RAL A G + I DVT I HNGCRP KRRR+
Sbjct: 89 DHGMRSLDVRVAGPGSGRESAVRALAAAGLDVRVIRDVTPIPHNGCRPPKRRRV 142
>gi|330444133|ref|YP_004377119.1| 30S ribosomal protein S11 [Chlamydophila pecorum E58]
gi|328807243|gb|AEB41416.1| ribosomal protein S11 [Chlamydophila pecorum E58]
Length = 133
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 88/128 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++ I+ ++ KN+ SG HV +TFNNT ++ITDP GN I+W+S VG+SGSRK+S F
Sbjct: 6 AQAKKSIKRKQSKNVPSGVVHVKATFNNTIVSITDPAGNVISWASAGKVGYSGSRKSSAF 65
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AA VA D + A N G+ +EV + G GAGR+SA+RAL + G + I D T + HNGC
Sbjct: 66 AATVAAQDAAKIAMNFGLKEVEVSLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGC 125
Query: 122 RPRKRRRI 129
RPRKRRR+
Sbjct: 126 RPRKRRRV 133
>gi|257095017|ref|YP_003168658.1| 30S ribosomal protein S11 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047541|gb|ACV36729.1| ribosomal protein S11 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 131
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK--NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K+ ++R + + N+ G AH+ ++FNNT ITITD GN ++W++ GF GSRK+
Sbjct: 1 MAKTAVKVRKKVKIRKNVAEGVAHIHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQVA + A G+ +LEV++ G G GR+S++RAL A+G I +I DVT I H
Sbjct: 61 TPFAAQVAAEAAGKVAVECGVKNLEVRIKGPGPGRESSVRALNALGMKITAITDVTPIPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRRI
Sbjct: 121 NGCRPPKRRRI 131
>gi|226968554|ref|YP_002808507.1| small subunit ribosomal protein S11 [Micromonas pusilla CCMP1545]
gi|226348849|gb|ACO50752.1| small subunit ribosomal protein S11 [Micromonas pusilla CCMP1545]
Length = 131
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + ++ + R+ + G H+++TFNNT +TI+D G IA SS GF G+RK
Sbjct: 1 MATKQRKGGVQKKARRKVQRGVVHILATFNNTLVTISDRSGMVIASSSSGACGFRGARKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A ++ + K+ ++G+ ++V V G GAGR+ A+RAL+ IG + I DVT + H
Sbjct: 61 TPFAAQTAAEEAARKSLDYGLKYVDVMVKGPGAGREMAIRALQQIGLGVTLIRDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|237736196|ref|ZP_04566677.1| SSU ribosomal protein S11P [Fusobacterium mortiferum ATCC 9817]
gi|229421749|gb|EEO36796.1| SSU ribosomal protein S11P [Fusobacterium mortiferum ATCC 9817]
Length = 129
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT + ITD G ++W S GF G++K +P
Sbjct: 1 MAKKKVAKIKKKVKNIPNGVAHIHSTFNNTIVAITDAEGKVVSWKSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EV+V G G+GR++ +R+L+A G + I DVT I HNG
Sbjct: 61 FAAQIAAEQAANIAMENGMKKVEVRVKGPGSGREACIRSLQAAGLEVTKITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|71905985|ref|YP_283572.1| 30S ribosomal protein S11 [Dechloromonas aromatica RCB]
gi|91207740|sp|Q47J79|RS11_DECAR RecName: Full=30S ribosomal protein S11
gi|71845606|gb|AAZ45102.1| SSU ribosomal protein S11P [Dechloromonas aromatica RCB]
Length = 129
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +++R + +KN+ G AH+ ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTATKVRKKVKKNVAEGIAHIHASFNNTIITITDRQGNALSWATSGGAGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ G+ ++EV++ G G GR+S++RAL A+G I SI DVT + HNG
Sbjct: 61 FAAQVAAEAAGKAAQECGVKNVEVRIKGPGPGRESSVRALNALGMKITSISDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|306486185|gb|ADM92735.1| ribosomal protein S11 [Franklinia alatamaha]
Length = 138
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKNTRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGCRPPKKRRV 138
>gi|325126898|ref|YP_004286135.1| ribosomal protein S11 [Fragaria vesca subsp. vesca]
gi|324022810|gb|ADY15384.1| ribosomal protein S11 [Fragaria vesca subsp. vesca]
Length = 138
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPKIGSRRNRRIGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|157737264|ref|YP_001489947.1| 30S ribosomal protein S11 [Arcobacter butzleri RM4018]
gi|315636981|ref|ZP_07892205.1| 30S ribosomal protein S11 [Arcobacter butzleri JV22]
gi|166991575|sp|A8ETK4|RS11_ARCB4 RecName: Full=30S ribosomal protein S11
gi|157699118|gb|ABV67278.1| 30S ribosomal protein S11 [Arcobacter butzleri RM4018]
gi|315478811|gb|EFU69520.1| 30S ribosomal protein S11 [Arcobacter butzleri JV22]
Length = 130
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RKNI G H+ ++FNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVTRKKIVRKNIADGIVHIAASFNNTMVTVTDNAGNAIAWSSAGNLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A +D KA HG+ ++ +K+ G G+GRD+A++A+ ++ G + + DVT +AHN
Sbjct: 61 FAAQAAVEDAMNKAMEHGIKNVGIKIQGPGSGRDTAVKAVGSMDGVRVTWLKDVTPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|116490682|ref|YP_810226.1| 30S ribosomal protein S11 [Oenococcus oeni PSU-1]
gi|122277134|sp|Q04G61|RS11_OENOB RecName: Full=30S ribosomal protein S11
gi|116091407|gb|ABJ56561.1| SSU ribosomal protein S11P [Oenococcus oeni PSU-1]
Length = 132
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M SR + R +KNI G AH+ STFNNT + ITD GN ++WSS +GF GSRK
Sbjct: 1 MASRTSRTSGHKRRAKKNIEKGVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + + A M S+ + V G G GR+SA+RA+ A G I +I DVT +
Sbjct: 61 STPFAAQLAGEAAAKAAMEQNMHSVAISVKGPGPGRESAIRAVAAAGLEITAISDVTPVP 120
Query: 118 HNGCRPRKRRR 128
HNG RP K+RR
Sbjct: 121 HNGSRPPKQRR 131
>gi|310779570|ref|YP_003967903.1| SSU ribosomal protein S11P [Ilyobacter polytropus DSM 2926]
gi|309748893|gb|ADO83555.1| SSU ribosomal protein S11P [Ilyobacter polytropus DSM 2926]
Length = 129
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 82/129 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ S FNNT +TITD G I W S GF G++K++P
Sbjct: 1 MAKKRVAKIKKKLKNIPNGIAHIHSNFNNTIVTITDTEGKVITWKSGGTSGFKGTKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVK G G+GR++ +R+++A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAANVAIENGMKKVEVKTKGPGSGREACIRSMQAAGLEVTKISDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|225020482|ref|ZP_03709674.1| hypothetical protein CORMATOL_00489 [Corynebacterium matruchotii
ATCC 33806]
gi|305680058|ref|ZP_07402868.1| 30S ribosomal protein S11 [Corynebacterium matruchotii ATCC 14266]
gi|224946871|gb|EEG28080.1| hypothetical protein CORMATOL_00489 [Corynebacterium matruchotii
ATCC 33806]
gi|305660678|gb|EFM50175.1| 30S ribosomal protein S11 [Corynebacterium matruchotii ATCC 14266]
Length = 134
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ +G A++ STFNNT ++ITDPHG I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVAAGHAYIKSTFNNTIVSITDPHGAVISWASSGHVGFKGSRKSTPFAAQL 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ + KA +HGM S+EV V G G+GR++A+R+L+A G + I DVT NGCRP K
Sbjct: 71 AAENAARKAMDHGMKSVEVFVKGPGSGRETAIRSLQAAGLEVTKISDVTPQPFNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|118474117|ref|YP_891267.1| 30S ribosomal protein S11 [Campylobacter fetus subsp. fetus 82-40]
gi|152060581|sp|A0RM34|RS11_CAMFF RecName: Full=30S ribosomal protein S11
gi|118413343|gb|ABK81763.1| ribosomal protein S11 [Campylobacter fetus subsp. fetus 82-40]
Length = 130
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + RKNI G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVIKKKIVRKNIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ + G ++ + D+T +AHN
Sbjct: 61 YAAQQAVEDAMNKAKEHGIKEVGIKVQGPGSGRETAVKSIGGVEGIKVLYLKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|161784225|ref|YP_001595541.1| ribosomal protein S11 [Lemna minor]
gi|224493280|sp|A9L9C9|RR11_LEMMI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|88696803|gb|ABD48528.1| ribosomal protein S11 [Lemna minor]
Length = 138
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/120 (41%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+++ +PFAAQ A +
Sbjct: 19 RKTGRRIPKGIIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGAKRGTPFAAQSAAVN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + D+T + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGPGRDAALRAIRRSGILLSFVRDITPMPHNGCRPPKKRRV 138
>gi|87306332|ref|ZP_01088479.1| 30S ribosomal protein S11 [Blastopirellula marina DSM 3645]
gi|87290511|gb|EAQ82398.1| 30S ribosomal protein S11 [Blastopirellula marina DSM 3645]
Length = 126
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R+N++ H+ +TFNNT++TITD G+++ W+S GF GSRK++P
Sbjct: 1 MAKAA---KKKIRRNVLQAVVHIKATFNNTQVTITDAKGDSLCWASAGTCGFKGSRKSTP 57
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FA Q A + KA G+ +EV+V G G+GR+SA+ AL A G + SI D T I HNG
Sbjct: 58 FAGQCAAQQAAEKALKFGVKEVEVRVKGPGSGRESAITALAAAGLNVRSIEDCTPIPHNG 117
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 118 CRPPKKRRV 126
>gi|75755692|ref|YP_319796.1| ribosomal protein S11 [Acorus calamus]
gi|161622342|ref|YP_001586214.1| ribosomal protein S11 [Acorus americanus]
gi|91207749|sp|Q3V501|RR11_ACOCL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|69216830|gb|AAZ03973.1| ribosomal protein S11 [Acorus americanus]
gi|74381742|emb|CAI53827.1| ribosomal protein S11 [Acorus calamus]
gi|160369885|gb|ABX38776.1| ribosomal protein S11 [Acorus americanus]
Length = 138
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKTGRRIPKGIIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGCRPPKKRRV 138
>gi|269837092|ref|YP_003319320.1| 30S ribosomal protein S11 [Sphaerobacter thermophilus DSM 20745]
gi|269786355|gb|ACZ38498.1| ribosomal protein S11 [Sphaerobacter thermophilus DSM 20745]
Length = 136
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/116 (52%), Positives = 86/116 (74%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
KNI GRA++ STFNNT +T+TD GN + W+S GF GSRK++P+AAQVA ++ + K
Sbjct: 21 KNIPRGRAYIQSTFNNTIVTLTDQAGNVVGWASAGSSGFKGSRKSTPYAAQVAAENAARK 80
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A +HGM ++V + G GAGR+ A+R+L+A G ++SI D+T + HNGCRP KRRR+
Sbjct: 81 AMDHGMRQVDVFIKGPGAGREMAIRSLQAAGMQVLSISDITPVPHNGCRPPKRRRV 136
>gi|323149184|ref|YP_004222013.1| ribosomal protein S11 [Coccomyxa sp. C-169]
gi|317467240|gb|ADV29861.1| ribosomal protein S11 [Coccomyxa sp. C-169]
Length = 130
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + ++ + G H+ ++FNNT +TIT G I+W S V GF G+RK +
Sbjct: 1 MARQVQKTLPKKAKRKVPRGVVHIQASFNNTIVTITTASGEVISWCSSGVCGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAA+ A + ++ GM +V V G G GR++A+R L+ G I +I D+T I HN
Sbjct: 61 PFAAKTAATTAAKQSIAQGMRQAQVMVKGPGPGRETAIRGLQEAGLRITAIRDITSIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPPKKRRI 130
>gi|226309834|ref|YP_002769728.1| 30S ribosomal protein S11 [Brevibacillus brevis NBRC 100599]
gi|254765369|sp|C0ZIK6|RS11_BREBN RecName: Full=30S ribosomal protein S11
gi|226092782|dbj|BAH41224.1| 30S ribosomal protein S11 [Brevibacillus brevis NBRC 100599]
Length = 133
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/133 (54%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
Query: 1 MPKSPSRIRNRER----KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K R R KN+ G AH+ STFNNT +TITDPHGN I+WSS +GF GSR
Sbjct: 1 MAKRKQATATRTRRRDRKNVEVGVAHIRSTFNNTIVTITDPHGNAISWSSAGSLGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQ+A + + A HGM SLEV V G GAGR++A+R+L+A G + I DVT I
Sbjct: 61 KSTPFAAQMAAEAAARVAMEHGMRSLEVSVKGPGAGREAAIRSLQATGLEVNMIKDVTPI 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 PHNGCRPPKRRRV 133
>gi|319442997|ref|ZP_07992153.1| 30S ribosomal protein S11 [Corynebacterium variabile DSM 44702]
Length = 134
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 59/118 (50%), Positives = 82/118 (69%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ G A++ STFNNT ++ITD G I+W+S VGF GSRK++PFAAQ+A + +
Sbjct: 17 VKKNVAHGAAYIKSTFNNTIVSITDEKGAVISWASSGHVGFKGSRKSTPFAAQMAAESAA 76
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA HGM ++V V G G+GR++A+R+L G + +I DVT HNGCRP KRRR+
Sbjct: 77 RKAMEHGMKKVDVFVKGPGSGRETAIRSLSTAGLEVGTISDVTPQPHNGCRPPKRRRV 134
>gi|290890097|ref|ZP_06553180.1| hypothetical protein AWRIB429_0570 [Oenococcus oeni AWRIB429]
gi|290480288|gb|EFD88929.1| hypothetical protein AWRIB429_0570 [Oenococcus oeni AWRIB429]
Length = 132
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M SR + R +KNI G AH+ STFNNT + ITD GN ++WSS +GF GSRK
Sbjct: 1 MASRTSRTSGHKRRAKKNIEKGVAHIHSTFNNTIVLITDQAGNAVSWSSAGSLGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + + A M S+ + V G G GR+SA+RA+ A G I +I DVT +
Sbjct: 61 STPFAAQLAGEAAAKAAMEQNMHSVAISVKGPGPGRESAIRAVAAAGLEITAISDVTPVP 120
Query: 118 HNGCRPRKRRR 128
HNG RP K+RR
Sbjct: 121 HNGSRPPKQRR 131
>gi|15645908|ref|NP_208087.1| 30S ribosomal protein S11 [Helicobacter pylori 26695]
gi|2500437|sp|P56018|RS11_HELPY RecName: Full=30S ribosomal protein S11
gi|2314461|gb|AAD08338.1| ribosomal protein S11 (rps11) [Helicobacter pylori 26695]
Length = 131
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGIKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|239618239|ref|YP_002941561.1| ribosomal protein S11 [Kosmotoga olearia TBF 19.5.1]
gi|259494627|sp|C5CGH6|RS11_KOSOT RecName: Full=30S ribosomal protein S11
gi|239507070|gb|ACR80557.1| ribosomal protein S11 [Kosmotoga olearia TBF 19.5.1]
Length = 130
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + SR + R++ NI G H+ STFNNT IT++D GNTI W+S VG+SGS+K++
Sbjct: 1 MARNRSSRTKKRKKLNIDRGVVHIKSTFNNTIITLSDLDGNTILWASGGTVGYSGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D + +A G++ + ++V G GAGR++A+R ++A G + SI D+T I HN
Sbjct: 61 PYAAQLAADKIAKEALKLGLTRVSIEVKGPGAGREAAIRTIQAAGLVVDSIKDITPIPHN 120
Query: 120 GC 121
GC
Sbjct: 121 GC 122
>gi|207108318|ref|ZP_03242480.1| 30S ribosomal protein S11 [Helicobacter pylori HPKX_438_CA4C1]
Length = 126
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 54/116 (46%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++P+AAQ A + +KA
Sbjct: 11 NIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKSTPYAAQQAVESALSKA 70
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + HNGCRP KRRR+
Sbjct: 71 KEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPHNGCRPPKRRRV 126
>gi|325068058|ref|ZP_08126731.1| ribosomal protein S11 [Actinomyces oris K20]
gi|326773989|ref|ZP_08233271.1| 30S ribosomal protein S11 [Actinomyces viscosus C505]
gi|326636128|gb|EGE37032.1| 30S ribosomal protein S11 [Actinomyces viscosus C505]
Length = 133
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
MP + R ++RKN+ G A++ STFNNT +++TDP G IAW S VGF GSR
Sbjct: 1 MPPKTRAAARKTRRKDRKNVTHGHAYIKSTFNNTIVSLTDPQGAVIAWCSSGQVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 KSTPYAAQLAAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSITDVTPQ 120
Query: 117 AHNGCRPRKRRRI 129
A NGCRP KRRR+
Sbjct: 121 AFNGCRPPKRRRV 133
>gi|297841003|ref|XP_002888383.1| ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
gi|297334224|gb|EFH64642.1| ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
Length = 138
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNTRSGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSVGTCGFRGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV++ G G GRD+ALRA+R G + + DVT + +NGCR
Sbjct: 72 AQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPYNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|299830619|ref|YP_003735067.1| 30S ribosomal protein S11 [Durinskia baltica]
gi|297384983|gb|ADI40282.1| 30S ribosomal protein S11 [Durinskia baltica]
Length = 130
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M ++ + ++R + SG H+ STFNNT +TIT+ G+T++W+S GF G+RK++
Sbjct: 1 MAQTNRKSATKKDRSSFTSGVVHIQSTFNNTIVTITNLTGDTVSWASAGSSGFKGARKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A + GM ++E+ V G G+GR++A+RA+ GF I SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALIALSTGMKNVEILVKGQGSGRETAIRAIEGAGFEIKSIQDITSVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|320533220|ref|ZP_08033934.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320134570|gb|EFW26804.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 133
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
MP + R ++RKN+ G A++ STFNNT +++TDP G IAW S VGF GSR
Sbjct: 1 MPPKTRPAARKTRRKDRKNVTHGHAYIKSTFNNTIVSLTDPQGAVIAWCSSGQVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 KSTPYAAQLAAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSITDVTPQ 120
Query: 117 AHNGCRPRKRRRI 129
A NGCRP KRRR+
Sbjct: 121 AFNGCRPPKRRRV 133
>gi|330837632|ref|YP_004412273.1| 30S ribosomal protein S11P [Spirochaeta coccoides DSM 17374]
gi|329749535|gb|AEC02891.1| SSU ribosomal protein S11P [Spirochaeta coccoides DSM 17374]
Length = 125
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 83/122 (68%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
++ + +K ++ G ++ +TFNNT +T+TD GN ++W+S +GF G++K++P+AAQ
Sbjct: 4 VKRKVKKTVLEGNVYIQATFNNTIVTVTDLRGNAVSWASAGGLGFRGAKKSTPYAAQTTA 63
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ + KA ++G+ + V V G G GR+SA+R L +G + SI DVT I HNGCRPRK R
Sbjct: 64 ETAAKKAMDYGLREVNVFVKGPGVGRESAIRTLGVLGLQVRSIRDVTPIPHNGCRPRKTR 123
Query: 128 RI 129
R+
Sbjct: 124 RV 125
>gi|227494571|ref|ZP_03924887.1| ribosomal protein S11 [Actinomyces coleocanis DSM 15436]
gi|226832305|gb|EEH64688.1| ribosomal protein S11 [Actinomyces coleocanis DSM 15436]
Length = 134
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 90/125 (72%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
+ R +ER+N+ G A++ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ
Sbjct: 10 ARKGRRKERRNVTHGHAYIKSTFNNTIVSITDPTGAVISWASSGQVGFKGSRKSTPFAAQ 69
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT HNGCRP
Sbjct: 70 LAAEAAARRAQEHGVKKVDVFVKGPGSGRETAIRSLQATGIEVGSIQDVTPQPHNGCRPP 129
Query: 125 KRRRI 129
KRRR+
Sbjct: 130 KRRRV 134
>gi|48474870|sp|Q8MCA0|RR11_PHAAN RecName: Full=30S ribosomal protein S11, chloroplastic
gi|22725691|gb|AAN04897.1| ribosomal protein S11 [Vigna angularis]
Length = 138
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIRNRER---------KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS + +R+ + I G HV ++FNNT +TITD G I+WSS G
Sbjct: 1 MAKSIPKTGSRKNVRIGSRNQTRKIPKGIIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM E+ + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEIMIKGPGLGRDAALRAIRRSGILLNFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCR K+RR+
Sbjct: 121 DVTPMPHNGCRSPKKRRV 138
>gi|212704607|ref|ZP_03312735.1| hypothetical protein DESPIG_02669 [Desulfovibrio piger ATCC 29098]
gi|212672006|gb|EEB32489.1| hypothetical protein DESPIG_02669 [Desulfovibrio piger ATCC 29098]
Length = 129
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ RE+KN+ G AH+ ++FNNT IT TD GN I+W+S GF GSRK++P
Sbjct: 1 MARPKKVVKKREKKNVPVGIAHIQASFNNTIITFTDTRGNAISWASSGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + KAQ++GM ++ V V G G+GR++A+RA+ A+GF + I DVT I HNG
Sbjct: 61 FAAQVAAETAARKAQDNGMRTVGVYVKGPGSGREAAMRAIAAVGFRVAFIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|307637966|gb|ADN80416.1| SSU ribosomal protein S11p:S14e [Helicobacter pylori 908]
gi|325996571|gb|ADZ51976.1| 30S ribosomal protein S11 [Helicobacter pylori 2018]
gi|325998161|gb|ADZ50369.1| 30S ribosomal protein S11 [Helicobacter pylori 2017]
Length = 131
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGIKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|239918174|ref|YP_002957732.1| SSU ribosomal protein S11P [Micrococcus luteus NCTC 2665]
gi|281415636|ref|ZP_06247378.1| SSU ribosomal protein S11P [Micrococcus luteus NCTC 2665]
gi|289706558|ref|ZP_06502908.1| 30S ribosomal protein S11 [Micrococcus luteus SK58]
gi|259494629|sp|C5CC37|RS11_MICLC RecName: Full=30S ribosomal protein S11
gi|239839381|gb|ACS31178.1| SSU ribosomal protein S11P [Micrococcus luteus NCTC 2665]
gi|289556693|gb|EFD50034.1| 30S ribosomal protein S11 [Micrococcus luteus SK58]
Length = 134
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/128 (49%), Positives = 90/128 (70%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R + KNI G+AH+ STFNNT ++ITD G I+W+S VGF GSRK++P+
Sbjct: 7 ASAARKPRRKANKNITVGQAHIKSTFNNTIVSITDTTGAVISWASSGEVGFKGSRKSTPY 66
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT +AHNG
Sbjct: 67 AAQMAAEQAAKRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVTPMAHNGA 126
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 127 RPAKRRRV 134
>gi|114330002|ref|YP_740683.1| ribosomal protein S11 [Nandina domestica]
gi|122165929|sp|Q09FS8|RR11_NANDO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|114054504|gb|ABI49897.1| ribosomal protein S11 [Nandina domestica]
Length = 138
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKSGRRIPKGVIHVQASFNNTIVTVTDIRGRVVSWSSAGTCGFRGTRRGTPFAAQTAASN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV++ G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|32266900|ref|NP_860932.1| 30S ribosomal protein S11 [Helicobacter hepaticus ATCC 51449]
gi|59798856|sp|Q7VGC1|RS11_HELHP RecName: Full=30S ribosomal protein S11
gi|32262952|gb|AAP77998.1| ribosomal protein S11 [Helicobacter hepaticus ATCC 51449]
Length = 130
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G + ++FNNT +TITD GN + W++ +GF GS+K++P
Sbjct: 1 MAKKSVTKKKNVKKNIARGIVCISASFNNTNVTITDEMGNVLCWATAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A + KA+ HG+ + +KV G G+GR++A++++ A+ G ++ + D+T + HN
Sbjct: 61 YAAQQAVESAMEKAKEHGIKEVGIKVQGPGSGRETAVKSVGAVEGIKVLWLKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|56477617|ref|YP_159206.1| 30S ribosomal protein S11 [Aromatoleum aromaticum EbN1]
gi|81357335|sp|Q5P309|RS11_AZOSE RecName: Full=30S ribosomal protein S11
gi|56313660|emb|CAI08305.1| 30S ribosomal protein S11 [Aromatoleum aromaticum EbN1]
Length = 129
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 92/129 (71%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ +++R + +KN+ G AHV ++FNNT ITITD GN ++W++ GF GSRK++P
Sbjct: 1 MAKTAAKVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + AQ G+ +LEV++ G G GR+SA+RAL A+G I SI D+T I HNG
Sbjct: 61 FAAQVAAEAAGKAAQECGVKNLEVRIKGPGPGRESAVRALNALGMKISSITDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RRI
Sbjct: 121 CRPPKKRRI 129
>gi|194132132|gb|ACF33386.1| ribosomal protein S11 [Gonystylus bancanus]
Length = 138
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K ++ + + I G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPKVGSRRNGRIGSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGIVLNFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|297625816|ref|YP_003687579.1| 30S ribosomal protein S11 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921581|emb|CBL56135.1| 30S ribosomal protein S11 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 135
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+V+G AH+ STFNNT I I+DP+G IAW+S VGF GSRK++PFAAQ+A + +A
Sbjct: 21 NVVTGEAHIKSTFNNTIIAISDPNGAVIAWASAGTVGFKGSRKSTPFAAQMAAEAAGRRA 80
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+HGM ++V V G G+GR++A+R+L AIG + +I DVT + HNGCRP KRRR+
Sbjct: 81 MDHGMKRVDVFVKGPGSGRETAIRSLGAIGLEVGTISDVTPVPHNGCRPPKRRRV 135
>gi|307128727|ref|YP_003880757.1| 30S ribosomal protein S11 [Candidatus Sulcia muelleri CARI]
gi|306483189|gb|ADM90059.1| 30S ribosomal protein S11 [Candidatus Sulcia muelleri CARI]
Length = 120
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/118 (54%), Positives = 83/118 (70%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
++KN V G H+ STFNN IT+T+ G+ IAWSS +GF GS+KN+P+AAQVA +D +
Sbjct: 3 KKKNSVIGEVHIKSTFNNIIITLTNKKGDVIAWSSAGKMGFKGSKKNTPYAAQVAAEDVA 62
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
K N G+ LEV + G GAGRD+A+RAL F I+ I D+T I HNGCRP K+RRI
Sbjct: 63 EKGLNAGIKKLEVIIKGPGAGRDAAIRALVNKNFNILVIKDITPIPHNGCRPPKKRRI 120
>gi|315320585|ref|YP_004072642.1| 30S ribosomal protein S11 [Thalassiosira oceanica CCMP1005]
gi|283569058|gb|ADB27595.1| 30S ribosomal protein S11 [Thalassiosira oceanica CCMP1005]
Length = 130
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + R N+ +G H+ STFNNT +TIT+ G+TI+W+S GF G+RK +
Sbjct: 1 MAQKTRKPAIKKNRTNLGTGVVHIQSTFNNTIVTITNITGDTISWASSGSSGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A + G+ ++E+ V G G+GR++A+R++ G I+SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALDALSLGIKTVEILVKGSGSGRETAIRSIEGAGLEILSIQDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|300932968|ref|ZP_07148224.1| 30S ribosomal protein S11 [Corynebacterium resistens DSM 45100]
Length = 134
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 2 PKSPSRIRN----RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
PK+P+R R +KN+ +G A++ STFNNT ++ITDP G I+W+S VGF GSRK
Sbjct: 3 PKTPTRARRTGRRVVKKNVANGHAYIKSTFNNTIVSITDPKGAVISWASSGHVGFKGSRK 62
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + + KA HGM ++V V G G+GR++A+R+L G + SI DVT
Sbjct: 63 STPFAAQLAAESAARKAMEHGMKKVDVFVKGPGSGRETAIRSLATAGLELGSIADVTPQP 122
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 123 HNGCRPPKRRRV 134
>gi|164597833|ref|NP_084726.2| ribosomal protein S11 [Oenothera elata subsp. hookeri]
gi|169142743|ref|YP_001687170.1| ribosomal protein S11 [Oenothera argillicola]
gi|169142893|ref|YP_001687316.1| ribosomal protein S11 [Oenothera glazioviana]
gi|169142978|ref|YP_001687400.1| ribosomal protein S11 [Oenothera biennis]
gi|169143064|ref|YP_001687484.1| ribosomal protein S11 [Oenothera parviflora]
gi|172045759|sp|Q9MTJ2|RR11_OENEH RecName: Full=30S ribosomal protein S11, chloroplastic
gi|224493283|sp|B0Z4Q9|RR11_OENAR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|224493284|sp|B0Z4Z3|RR11_OENBI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|224493285|sp|B0Z577|RR11_OENGL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|224493286|sp|B0Z5G1|RR11_OENPA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|159792981|gb|ABW98737.1| ribosomal protein S11 [Oenothera argillicola]
gi|159793151|gb|ABW98905.1| ribosomal protein S11 [Oenothera biennis]
gi|159895505|gb|ABX10070.1| ribosomal protein S11 [Oenothera glazioviana]
gi|159895590|gb|ABX10154.1| ribosomal protein S11 [Oenothera parviflora]
gi|162423700|emb|CAB67192.2| ribosomal protein S11 [Oenothera elata subsp. hookeri]
Length = 144
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 54/114 (47%), Positives = 71/114 (62%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G HV ++F+NT +T+TD G I+WSS GF +RK +PFAAQ A D
Sbjct: 31 IPKGVIHVQASFHNTIVTVTDVRGRVISWSSAGTCGFKSTRKGTPFAAQTAAGDAIRPVV 90
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV++ G G GRD+ALRA+R G + I DVT + HNGCRP K+RR+
Sbjct: 91 DQGMQRAEVRIKGPGLGRDAALRAIRRSGIRLSCIRDVTPLPHNGCRPPKKRRV 144
>gi|42561247|ref|NP_975698.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|83319613|ref|YP_424635.1| 30S ribosomal protein S11 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|331703691|ref|YP_004400378.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|59798738|sp|Q6MSP8|RS11_MYCMS RecName: Full=30S ribosomal protein S11
gi|91207659|sp|Q2SRH8|RS11_MYCCT RecName: Full=30S ribosomal protein S11
gi|42492745|emb|CAE77340.1| 30S RIBOSOMAL PROTEIN S11 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|83283499|gb|ABC01431.1| 30S ribosomal protein S11 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|256383787|gb|ACU78357.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384617|gb|ACU79186.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296456044|gb|ADH22279.1| 30S ribosomal protein S11 [synthetic Mycoplasma mycoides
JCVI-syn1.0]
gi|301320447|gb|ADK69090.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
gi|328802246|emb|CBW54400.1| 30S ribosomal protein S11 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 129
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/128 (45%), Positives = 86/128 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + +KNI G AH+ STFNNT +T++D GN ++WSS +GF GS+K++P
Sbjct: 1 MANPKPQAKKKIKKNIPKGIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+ ++ + A ++G+ ++ V+V G G GRD+A+RAL+ G I SI D T I HNG
Sbjct: 61 YAAQLISEAAAKGAMDNGVKTVSVEVKGPGPGRDAAIRALQMAGLEITSIKDTTPIPHNG 120
Query: 121 CRPRKRRR 128
RPRKR R
Sbjct: 121 VRPRKRPR 128
>gi|315587184|gb|ADU41565.1| 30S ribosomal protein S11 [Helicobacter pylori 35A]
Length = 131
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ AI G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGAIEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|157325563|ref|YP_001468341.1| ribosomal protein S11 [Ipomoea purpurea]
gi|171769954|sp|A7Y3I2|RR11_IPOPU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|157056791|gb|ABV02381.1| ribosomal protein S11 [Ipomoea purpurea]
Length = 138
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ R + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRRSSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAA+ A + + GM EV + G G GRD+ALRA+ G + +
Sbjct: 61 FKGTRRGTPFAAETAASNAIRTVVDRGMLRAEVMIKGPGLGRDAALRAILQSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|268316433|ref|YP_003290152.1| 30S ribosomal protein S11 [Rhodothermus marinus DSM 4252]
gi|262333967|gb|ACY47764.1| ribosomal protein S11 [Rhodothermus marinus DSM 4252]
Length = 129
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 87/129 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K R + +G+AH+ STFNNT +TITD +GNTIAWSS GF GSRK +P
Sbjct: 1 MAKKQRTTRKKNVIVEQNGQAHIQSTFNNTIVTITDQYGNTIAWSSGGKEGFKGSRKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A + +A + G+ ++V V G G+GR+SA+RAL A G ++SI DVT + HNG
Sbjct: 61 YAAQMAATSAAREAYDLGLRRVDVFVKGPGSGRESAIRALAAAGLELLSIRDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|189501629|ref|YP_001957346.1| 30S ribosomal protein S11 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497070|gb|ACE05617.1| ribosomal protein S11 [Candidatus Amoebophilus asiaticus 5a2]
Length = 130
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M KS + + R G+AH+ +T+NN I++T+ G I+WSS +GF GS+KN+
Sbjct: 1 MAKSQKEKTKKRVVSVGKLGQAHIKATYNNIIISMTNEIGQVISWSSAGKMGFKGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQV+ DC+ A G+ +EV V G G GR+SA+R ++ G I +I DVT I HN
Sbjct: 61 PYAAQVSAGDCAKVAHELGLRKVEVYVKGAGVGRESAIRTIQDAGIEISTIKDVTPIPHN 120
Query: 120 GCRPRKRRR 128
GCRP KRRR
Sbjct: 121 GCRPPKRRR 129
>gi|317125842|ref|YP_004099954.1| 30S ribosomal protein S11P [Intrasporangium calvum DSM 43043]
gi|315589930|gb|ADU49227.1| SSU ribosomal protein S11P [Intrasporangium calvum DSM 43043]
Length = 131
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 89/126 (70%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+++R +E+KN+ G AH+ STFNNT I+ITDP G IAW+S VGF GSRK++P+AA
Sbjct: 6 RVTKVRRKEKKNVAHGHAHIKSTFNNTIISITDPTGAVIAWASAGQVGFKGSRKSTPYAA 65
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +A HGM ++V V G G+GR++A+R+L A G + +I DVT HNG RP
Sbjct: 66 QMAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLTAAGLEVGAISDVTPTPHNGVRP 125
Query: 124 RKRRRI 129
KRRR+
Sbjct: 126 PKRRRV 131
>gi|86158344|ref|YP_465129.1| 30S ribosomal protein S11 [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723039|sp|Q2IJ64|RS11_ANADE RecName: Full=30S ribosomal protein S11
gi|85774855|gb|ABC81692.1| SSU ribosomal protein S11P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 127
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/115 (62%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ STFNNT+ITITD GN IAWSS GF GSRK++PFAAQVA D +AKA
Sbjct: 13 NIAAGIVHIASTFNNTQITITDVTGNVIAWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 72
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCRP KRRR+
Sbjct: 73 MEHGLKTVSVVVKGPGAGRESALRALSAAGLKITLIRDVTPIPHNGCRPPKRRRV 127
>gi|171769475|sp|A7HBP3|RS11_ANADF RecName: Full=30S ribosomal protein S11
Length = 127
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 70/115 (60%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ STFNNT ITI D GN I+WSS GF GSRK++PFAAQVA D +AKA
Sbjct: 13 NIATGIVHIASTFNNTMITICDASGNVISWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 72
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCRP KRRR+
Sbjct: 73 MEHGLKTVSVVVKGPGAGRESALRALSAAGLKITLIRDVTPIPHNGCRPPKRRRV 127
>gi|15618537|ref|NP_224823.1| 30S ribosomal protein S11 [Chlamydophila pneumoniae CWL029]
gi|15836159|ref|NP_300683.1| 30S ribosomal protein S11 [Chlamydophila pneumoniae J138]
gi|16752413|ref|NP_444672.1| 30S ribosomal protein S11 [Chlamydophila pneumoniae AR39]
gi|33241984|ref|NP_876925.1| 30S ribosomal protein S11 [Chlamydophila pneumoniae TW-183]
gi|6831657|sp|Q9Z7S7|RS11_CHLPN RecName: Full=30S ribosomal protein S11
gi|4376925|gb|AAD18766.1| S11 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189054|gb|AAF38003.1| ribosomal protein S11 [Chlamydophila pneumoniae AR39]
gi|8978999|dbj|BAA98834.1| S11 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236494|gb|AAP98582.1| ribosomal protein S11 [Chlamydophila pneumoniae TW-183]
gi|269302411|gb|ACZ32511.1| ribosomal protein S11 [Chlamydophila pneumoniae LPCoLN]
Length = 133
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 88/128 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++ ++ ++ KNI SG HV +TFNNT ++ITDP GN I+W+S VG+SGSRK+S F
Sbjct: 6 AQAKKSVKRKQLKNIPSGVVHVKATFNNTIVSITDPAGNVISWASAGKVGYSGSRKSSAF 65
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AA VA D + A N G+ +EV + G GAGR+SA+RAL + G + I D T + HNGC
Sbjct: 66 AATVAAQDAAKTAMNSGLKEVEVCLKGTGAGRESAVRALISAGLVVSVIRDETPVPHNGC 125
Query: 122 RPRKRRRI 129
RPRKRRR+
Sbjct: 126 RPRKRRRV 133
>gi|315453712|ref|YP_004073982.1| 30S ribosomal protein S11 [Helicobacter felis ATCC 49179]
gi|315132764|emb|CBY83392.1| 30S ribosomal protein S11 [Helicobacter felis ATCC 49179]
Length = 130
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ ++FNNT IT+TD GN I W++ +GF GS+K++P
Sbjct: 1 MAKRTGIKKKIVKKNIARGIVYIAASFNNTNITVTDEMGNAICWATAGGLGFRGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ +I G ++ I D+T + HN
Sbjct: 61 YAAQQAVESAMSKAKEHGIKEVGIKVQGPGSGRETAIKSVGSIEGIKVLWIKDITPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|313673442|ref|YP_004051553.1| SSU ribosomal protein s11p [Calditerrivibrio nitroreducens DSM
19672]
gi|312940198|gb|ADR19390.1| SSU ribosomal protein S11P [Calditerrivibrio nitroreducens DSM
19672]
Length = 127
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/113 (50%), Positives = 78/113 (69%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ STFNNT +T TD GN + WS+ GF SRK++P+AAQ+A + + KA +
Sbjct: 15 PRGIAHIHSTFNNTIVTFTDLSGNVLCWSAGGTEGFKNSRKSTPYAAQIAAESAAKKAVD 74
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +EV V G GAGR+SA+RA+++ G I I D T I HNGCRPRK+RR+
Sbjct: 75 YGVREVEVNVKGPGAGRESAIRAIQSAGIKITLIRDTTPIPHNGCRPRKKRRV 127
>gi|149195170|ref|ZP_01872261.1| 30S ribosomal protein S11 [Caminibacter mediatlanticus TB-2]
gi|149134722|gb|EDM23207.1| 30S ribosomal protein S11 [Caminibacter mediatlanticus TB-2]
Length = 130
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + +K + G ++ +TFNNT IT+TD GN + WSS +GF GS+K++P
Sbjct: 1 MAKRKLTKKKKIKKQVGRGIVYISATFNNTMITVTDEMGNALCWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A +D AKA+ +G+ + +KV G G GR++A++ + AI G ++ + DVT + HN
Sbjct: 61 FAAQQAVEDVMAKAKEYGIKEVGIKVQGPGGGRETAVKTVGAIDGIKVLWMKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|261840010|gb|ACX99775.1| 30S ribosomal protein S11 [Helicobacter pylori 52]
Length = 131
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGIVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|257453244|ref|ZP_05618543.1| 30S ribosomal protein S11 [Fusobacterium sp. 3_1_5R]
gi|257467161|ref|ZP_05631472.1| 30S ribosomal protein S11 [Fusobacterium gonidiaformans ATCC 25563]
gi|315918292|ref|ZP_07914532.1| SSU ribosomal protein S11P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059778|ref|ZP_07924263.1| SSU ribosomal protein S11P [Fusobacterium sp. 3_1_5R]
gi|313685454|gb|EFS22289.1| SSU ribosomal protein S11P [Fusobacterium sp. 3_1_5R]
gi|313692167|gb|EFS29002.1| SSU ribosomal protein S11P [Fusobacterium gonidiaformans ATCC
25563]
Length = 129
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT + ITD G I+W S GF G++K +P
Sbjct: 1 MAKKTVAKVKKKSKNIPNGVAHIHSTFNNTIVAITDTEGKVISWRSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EV+V G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAGVAMENGMKKVEVRVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|224373705|ref|YP_002608077.1| 30S ribosomal protein S11 [Nautilia profundicola AmH]
gi|254811036|sp|B9L6T9|RS11_NAUPA RecName: Full=30S ribosomal protein S11
gi|223588779|gb|ACM92515.1| ribosomal protein S11 [Nautilia profundicola AmH]
Length = 130
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + +K + G ++ +TFNNT IT+TD GN + WSS +GF GS+K++P
Sbjct: 1 MAKRKVTKKKKIKKQVGRGVVYISATFNNTMITVTDEMGNALCWSSAGALGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A +D AKA+ +G+ + +KV G G GR++A++ + AI G ++ + DVT + HN
Sbjct: 61 FAAQQAVEDVMAKAKEYGIKEVGIKVQGPGGGRETAVKTVGAIEGIKVLWMKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|29565641|ref|NP_817220.1| ribosomal protein S11 [Pinus koraiensis]
gi|237688618|ref|YP_002905235.1| ribosomal protein S11 [Pinus gerardiana]
gi|237688686|ref|YP_002905302.1| ribosomal protein S11 [Pinus krempfii]
gi|324986385|ref|YP_004276257.1| ribosomal protein S11 [Pinus lambertiana]
gi|324986456|ref|YP_004276327.1| ribosomal protein S11 [Pinus monophylla]
gi|324986528|ref|YP_004276398.1| ribosomal protein S11 [Pinus nelsonii]
gi|62287471|sp|Q85WZ9|RR11_PINKO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|29469740|gb|AAO74068.1| ribosomal protein S11 [Pinus koraiensis]
gi|226876078|gb|ACO89334.1| ribosomal protein S11 [Pinus gerardiana]
gi|226951143|gb|ACO94206.1| ribosomal protein S11 [Pinus krempfii]
gi|228016087|gb|ACP50925.1| ribosomal protein S11 [Pinus rzedowskii]
gi|228016142|gb|ACP50979.1| ribosomal protein S11 [Pinus sibirica]
gi|228016208|gb|ACP51044.1| ribosomal protein S11 [Pinus squamata]
gi|228016269|gb|ACP51104.1| ribosomal protein S11 [Pinus strobus]
gi|228016647|gb|ACP51476.1| ribosomal protein S11 [Pinus albicaulis]
gi|228016716|gb|ACP51544.1| ribosomal protein S11 [Pinus aristata]
gi|228016780|gb|ACP51607.1| ribosomal protein S11 [Pinus armandii]
gi|228016904|gb|ACP51729.1| ribosomal protein S11 [Pinus ayacahuite]
gi|228017150|gb|ACP51971.1| ribosomal protein S11 [Pinus cembra]
gi|228017273|gb|ACP52092.1| ribosomal protein S11 [Pinus flexilis]
gi|228017338|gb|ACP52156.1| ribosomal protein S11 [Pinus lambertiana]
gi|228017531|gb|ACP52346.1| ribosomal protein S11 [Pinus monticola]
gi|228017594|gb|ACP52408.1| ribosomal protein S11 [Pinus parviflora var. pentaphylla]
gi|228017658|gb|ACP52471.1| ribosomal protein S11 [Pinus peuce]
gi|323514234|gb|ADX89781.1| ribosomal protein S11 [Pinus lambertiana]
gi|323522551|gb|ADX94893.1| ribosomal protein S11 [Pinus monophylla]
gi|323522716|gb|ADX94964.1| ribosomal protein S11 [Pinus nelsonii]
Length = 130
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ RI R ++ G +V ++FNNT +T TD G I+WSS GF G+R+ +
Sbjct: 1 MSKTIKRIGSRRNEHRVLKGVIYVQASFNNTIVTATDVRGQVISWSSAGACGFKGTRRGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + G+ +EV +SG G GRD+ALR +R G + + DVT + HN
Sbjct: 61 PFAAQTAAENVIRTLMDRGIGRVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|295137037|ref|YP_003587584.1| ribosomal protein S11 [Pisum sativum]
gi|133727|sp|P06587|RR11_PEA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|12179|emb|CAA33667.1| ribosomal protein S11 (AA 1-138) [Pisum sativum]
gi|12184|emb|CAA28693.1| unnamed protein product [Pisum sativum]
gi|293338609|gb|ADE43582.1| ribosomal protein S11 [Pisum sativum]
Length = 138
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS +I + + I G ++ ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSIPKIGSRKTGRIGSRKHPRKIPKGVIYIQASFNNTIVTVTDVRGRVISWSSAGSCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + GM EV++ G G GRD+ALRA+ G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIQTVVEQGMQRAEVRIKGPGLGRDAALRAIYRSGILLKVIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCR K+RR+
Sbjct: 121 DVTPLPHNGCRAPKKRRV 138
>gi|257463989|ref|ZP_05628374.1| 30S ribosomal protein S11 [Fusobacterium sp. D12]
gi|317061511|ref|ZP_07925996.1| SSU ribosomal protein S11P [Fusobacterium sp. D12]
gi|313687187|gb|EFS24022.1| SSU ribosomal protein S11P [Fusobacterium sp. D12]
Length = 129
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT + ITD G I+W S GF G++K +P
Sbjct: 1 MAKKTVAKVKKKSKNIPNGVAHIHSTFNNTIVAITDTEGKVISWKSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EV+V G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAGVAMENGMKKVEVRVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|15612280|ref|NP_223933.1| 30S ribosomal protein S11 [Helicobacter pylori J99]
gi|207092546|ref|ZP_03240333.1| 30S ribosomal protein S11 [Helicobacter pylori HPKX_438_AG0C1]
gi|208435193|ref|YP_002266859.1| ribosomal protein S11 [Helicobacter pylori G27]
gi|217033614|ref|ZP_03439042.1| hypothetical protein HP9810_899g50 [Helicobacter pylori 98-10]
gi|7388124|sp|Q9ZJT3|RS11_HELPJ RecName: Full=30S ribosomal protein S11
gi|226708376|sp|B5Z8U4|RS11_HELPG RecName: Full=30S ribosomal protein S11
gi|4155843|gb|AAD06817.1| 30S RIBOSOMAL PROTEIN S11 [Helicobacter pylori J99]
gi|208433122|gb|ACI27993.1| ribosomal protein S11 [Helicobacter pylori G27]
gi|216943960|gb|EEC23394.1| hypothetical protein HP9810_899g50 [Helicobacter pylori 98-10]
gi|261838614|gb|ACX98380.1| ribosomal protein S11 [Helicobacter pylori 51]
gi|297380477|gb|ADI35364.1| 30S ribosomal protein S11 [Helicobacter pylori v225d]
gi|308062580|gb|ADO04468.1| 30S ribosomal protein S11 [Helicobacter pylori Cuz20]
gi|308064072|gb|ADO05959.1| 30S ribosomal protein S11 [Helicobacter pylori Sat464]
gi|317009978|gb|ADU80558.1| 30S ribosomal protein S11 [Helicobacter pylori India7]
gi|317011495|gb|ADU85242.1| 30S ribosomal protein S11 [Helicobacter pylori SouthAfrica7]
gi|317013082|gb|ADU83690.1| 30S ribosomal protein S11 [Helicobacter pylori Lithuania75]
gi|317014686|gb|ADU82122.1| 30S ribosomal protein S11 [Helicobacter pylori Gambia94/24]
gi|317181017|dbj|BAJ58803.1| 30S ribosomal protein S11 [Helicobacter pylori F32]
Length = 131
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|34500946|ref|NP_904131.1| ribosomal protein S11 [Amborella trichopoda]
gi|62287446|sp|Q70XX6|RR11_AMBTC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|34481661|emb|CAD45139.1| ribosomal protein S11 [Amborella trichopoda]
Length = 138
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/120 (42%), Positives = 72/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++W S GF G+R+ +PFAAQ A +
Sbjct: 19 RKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWCSAGTCGFRGTRRGTPFAAQTAATN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGVLLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|269101037|ref|YP_003289185.1| 30S ribosomal protein S11 [Ectocarpus siliculosus]
gi|266631545|emb|CAV31216.1| Chloroplast 30S ribosomal protein S11 [Ectocarpus siliculosus]
gi|270118675|emb|CAT18737.1| Chloroplast 30S ribosomal protein S11 [Ectocarpus siliculosus]
Length = 123
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/122 (48%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ + ++ IV+G HV +TFNNT +TI+D +GNT++W+S V F GSRK +PFA+Q A +
Sbjct: 2 KKKIKRTIVTGTMHVHATFNNTIVTISDLNGNTLSWASSGTVDFKGSRKGTPFASQKAAE 61
Query: 69 DCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ A++ +G+ LEV V G G GR+ A+RA+ G +VSI DVT I +NGCRP KRR
Sbjct: 62 RAALIAKDTYGLKRLEVVVKGSGPGREPAIRAVSQKGIRVVSIKDVTFIPYNGCRPPKRR 121
Query: 128 RI 129
R+
Sbjct: 122 RV 123
>gi|188036212|pdb|3BBN|K Chain K, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 140
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 74/126 (58%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
S ++ + I G HV ++FNNT +T+TD G ++W+S GF G+++ +PFAA
Sbjct: 15 RISSRKSASARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAA 74
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q A + GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP
Sbjct: 75 QTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRP 134
Query: 124 RKRRRI 129
K+RR+
Sbjct: 135 PKKRRV 140
>gi|108796891|ref|YP_636189.1| ribosomal protein S11 [Pseudendoclonium akinetum]
gi|91207758|sp|Q3ZJ78|RR11_PSEAK RecName: Full=30S ribosomal protein S11, chloroplastic
gi|56159589|gb|AAV80613.1| ribosomal protein S11 [Pseudendoclonium akinetum]
Length = 130
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRER-KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + + + G H+ STFNNT +TIT+ G I+WSS VGF G+RK++
Sbjct: 1 MAKQIRKTNKKVKMTKLPKGVVHIQSTFNNTIVTITNLKGEVISWSSAGAVGFKGARKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAA+ A + ++ + G+ +V V G G GR++A+R L G I I D+T I HN
Sbjct: 61 PFAAKTAAQTAARQSMDQGLKQAKVLVKGAGPGRETAIRGLIDSGLQITLIRDITAIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|229821594|ref|YP_002883120.1| ribosomal protein S11 [Beutenbergia cavernae DSM 12333]
gi|259494615|sp|C5C0G2|RS11_BEUC1 RecName: Full=30S ribosomal protein S11
gi|229567507|gb|ACQ81358.1| ribosomal protein S11 [Beutenbergia cavernae DSM 12333]
Length = 135
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/128 (50%), Positives = 90/128 (70%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ R +E+KN+ G A++ STFNNT ++ITDP G IAW+S VGF GSRK++PF
Sbjct: 8 AGGARKTRRKEKKNVSHGHAYIKSTFNNTIVSITDPSGAVIAWASSGQVGFKGSRKSTPF 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT AHNG
Sbjct: 68 AAQLAAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQATGLEVGSISDVTPQAHNGV 127
Query: 122 RPRKRRRI 129
RP KRRR+
Sbjct: 128 RPPKRRRV 135
>gi|308233883|ref|ZP_07664620.1| SSU ribosomal protein S11P [Atopobium vaginae DSM 15829]
gi|328943590|ref|ZP_08241055.1| 30S ribosomal protein S11 [Atopobium vaginae DSM 15829]
gi|327491559|gb|EGF23333.1| 30S ribosomal protein S11 [Atopobium vaginae DSM 15829]
Length = 132
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/132 (53%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
MPK + R ERKNI G+AH+ STFNNT I+ITDP GN IAW S VGF GSRK
Sbjct: 1 MPKKNQKTQHIRRSERKNIAVGQAHIKSTFNNTTISITDPQGNVIAWQSGGTVGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQVA + C+ A HG+ + V V G G+GR++A+R+L+A G + I D T +
Sbjct: 61 STPFAAQVAAEACAKAAMEHGLHKVAVFVKGPGSGRETAIRSLQAAGLEVSGIQDKTPVP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPCKRRRV 132
>gi|139438876|ref|ZP_01772336.1| Hypothetical protein COLAER_01340 [Collinsella aerofaciens ATCC
25986]
gi|133775587|gb|EBA39407.1| Hypothetical protein COLAER_01340 [Collinsella aerofaciens ATCC
25986]
Length = 134
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 91/126 (72%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+R++ +RKNI G+AH+ STFNNT ++ITDP GN I+W S VGF GSRK++PFAA
Sbjct: 9 RAARLKRADRKNISVGQAHIRSTFNNTIVSITDPQGNVISWKSAGQVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +A HGM + V V G G+GR++A+R+L+A G + SI D T I HNGCRP
Sbjct: 69 QMAAEAAAKQAMEHGMKKVSVFVKGPGSGRETAIRSLQAAGLEVSSIQDKTPIPHNGCRP 128
Query: 124 RKRRRI 129
+KRRR+
Sbjct: 129 KKRRRV 134
>gi|118411211|ref|YP_874605.1| 30S ribosomal protein S11 [Thalassiosira pseudonana]
gi|125987672|sp|A0T0Z3|RR11_THAPS RecName: Full=30S ribosomal protein S11, chloroplastic
gi|116739958|gb|ABK20828.1| 30S ribosomal protein S11 [Thalassiosira pseudonana]
Length = 130
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + R N+ +G H+ STFNNT +TIT+ G+TI+W+S GF G+RK +
Sbjct: 1 MAQKFRKQAVKKNRTNLGTGVVHIQSTFNNTIVTITNMSGDTISWASSGSSGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + A + G+ ++E+ V G G+GR++A+R++ G I+SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALDALSTGIKTVEILVKGQGSGRETAIRSIEGAGLEILSIQDITPVPHN 120
Query: 120 GCRPRKRRRI 129
GCRPRKRRR+
Sbjct: 121 GCRPRKRRRV 130
>gi|81301601|ref|YP_398897.1| ribosomal protein S11 [Nicotiana tomentosiformis]
gi|91207756|sp|Q33BZ9|RR11_NICTO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|80750960|dbj|BAE48036.1| ribosomal protein S11 [Nicotiana tomentosiformis]
Length = 138
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ +I + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPKISSRRNGRIGSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAVANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|317178414|dbj|BAJ56202.1| 30S ribosomal protein S11 [Helicobacter pylori F30]
gi|317182541|dbj|BAJ60325.1| 30S ribosomal protein S11 [Helicobacter pylori F57]
Length = 131
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + K NI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVAAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|108563665|ref|YP_627981.1| 30S ribosomal protein S11 [Helicobacter pylori HPAG1]
gi|210135454|ref|YP_002301893.1| 30S ribosomal protein S11 [Helicobacter pylori P12]
gi|123246891|sp|Q1CRW5|RS11_HELPH RecName: Full=30S ribosomal protein S11
gi|226708375|sp|B6JND5|RS11_HELP2 RecName: Full=30S ribosomal protein S11
gi|107837438|gb|ABF85307.1| ribosomal protein S11 [Helicobacter pylori HPAG1]
gi|210133422|gb|ACJ08413.1| 30S ribosomal protein S11 [Helicobacter pylori P12]
Length = 131
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + K NI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVVAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|317178034|dbj|BAJ55823.1| 30S ribosomal protein S11 [Helicobacter pylori F16]
Length = 131
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 121 NGCRPPKKRRV 131
>gi|91214174|ref|YP_538798.1| ribosomal protein S11 [Glycine max]
gi|91207761|sp|Q2PMQ2|RR11_SOYBN RecName: Full=30S ribosomal protein S11, chloroplastic
gi|83595775|gb|ABC25156.1| ribosomal protein S11 [Glycine max]
gi|255631532|gb|ACU16133.1| unknown [Glycine max]
Length = 138
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 74/127 (58%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KNVRIGSRKHTRKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + I DVT + HNGCR
Sbjct: 72 AQTAAGNAIRTVSDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFIRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
K+RR+
Sbjct: 132 SPKKRRV 138
>gi|227497207|ref|ZP_03927455.1| ribosomal protein S11 [Actinomyces urogenitalis DSM 15434]
gi|226833338|gb|EEH65721.1| ribosomal protein S11 [Actinomyces urogenitalis DSM 15434]
Length = 133
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 1 MPKSPS----RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
MP + R ++RKN+ G A++ STFNNT +++TDP+G IAW+S VGF GSR
Sbjct: 1 MPPKSRTTVRKPRRKDRKNVTHGHAYIKSTFNNTIVSLTDPNGAVIAWASSGQVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++P+AAQ+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 61 KSTPYAAQLAAEAAARRAQEHGMKKIDVFVKGPGSGRETAIRSLQAAGLEVGSITDVTPQ 120
Query: 117 AHNGCRPRKRRRI 129
AHNGCRP KRRR+
Sbjct: 121 AHNGCRPPKRRRV 133
>gi|51245002|ref|YP_064886.1| 30S ribosomal protein S11 [Desulfotalea psychrophila LSv54]
gi|59798686|sp|Q6AP45|RS11_DESPS RecName: Full=30S ribosomal protein S11
gi|50876039|emb|CAG35879.1| probable 30S ribosomal protein S11 [Desulfotalea psychrophila
LSv54]
Length = 126
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G ++ STFNNT +TI+D GN ++W S V+GF GSRK++PFAAQ A D + KA
Sbjct: 12 NIPEGIVYIYSTFNNTIVTISDKQGNVVSWCSAGVLGFKGSRKSTPFAAQNALADAAKKA 71
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +EVKV G G GR++ALRAL + GF + I DVT + HNGC+P KRRR+
Sbjct: 72 ADCGMRKVEVKVKGPGPGREAALRALVSTGFEVSRIYDVTPVPHNGCKPPKRRRV 126
>gi|308178107|ref|YP_003917513.1| 30S ribosomal protein S11 [Arthrobacter arilaitensis Re117]
gi|307745570|emb|CBT76542.1| 30S ribosomal protein S11 [Arthrobacter arilaitensis Re117]
Length = 133
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + R +++KNI G+AH+ STFNNT ++ITDP G I+W+S VG GSRK++P+AA
Sbjct: 8 AVRKPRRKDKKNIALGQAHIKSTFNNTIVSITDPTGAVISWASAGEVGMKGSRKSTPYAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + +AQ HGM ++V V G G+GR++A+R+L+A G + SI DV+ AHNGCRP
Sbjct: 68 QMAAESAAKRAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGSISDVSPSAHNGCRP 127
Query: 124 RKRRRI 129
KRRR+
Sbjct: 128 SKRRRV 133
>gi|291277244|ref|YP_003517016.1| 30S ribosomal protein S11 [Helicobacter mustelae 12198]
gi|290964438|emb|CBG40288.1| 30S ribosomal protein S11 [Helicobacter mustelae 12198]
Length = 131
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K S + + +KNI G + ++FNNT +TITD GN I W++ +GF GS+K++
Sbjct: 1 MAKRSAATKKKVVKKNIARGIVCISASFNNTNVTITDEMGNVICWATAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + KA+ HG+ + +KV G G+GR++A++++ + G ++ I DVT + H
Sbjct: 61 PYAAQQAVESAMMKAKEHGIKEVGIKVQGPGSGRETAIKSVGVVEGIKVLWIKDVTPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|300779798|ref|ZP_07089654.1| 30S ribosomal protein S11 [Corynebacterium genitalium ATCC 33030]
gi|300533908|gb|EFK54967.1| 30S ribosomal protein S11 [Corynebacterium genitalium ATCC 33030]
Length = 114
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 58/111 (52%), Positives = 82/111 (73%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G A++ STFNNT ++ITDP+G I+W+S VGF GSRK++PFAAQ+A + + KA +HG
Sbjct: 4 GHAYIKSTFNNTIVSITDPNGAVISWASSGHVGFKGSRKSTPFAAQMAAESAARKAMDHG 63
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
M ++V V G G+GR++A+R+++A G + SI DVT NGCRP KRRR+
Sbjct: 64 MKKVDVFVKGPGSGRETAIRSIQAAGLEVSSISDVTPQPFNGCRPPKRRRV 114
>gi|294786437|ref|ZP_06751691.1| 30S ribosomal protein S11 [Parascardovia denticolens F0305]
gi|315226000|ref|ZP_07867788.1| 30S ribosomal protein S11 [Parascardovia denticolens DSM 10105]
gi|294485270|gb|EFG32904.1| 30S ribosomal protein S11 [Parascardovia denticolens F0305]
gi|315120132|gb|EFT83264.1| 30S ribosomal protein S11 [Parascardovia denticolens DSM 10105]
Length = 132
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 59/127 (46%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R ++RK++ G+AH+ STFNNT ++ITDP G +AW+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRKDRKSVPVGQAHIKSTFNNTIVSITDPSGAVVAWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KAQ HG+ ++V V G G+GR++A+R+L++ G + SI D T A NG R
Sbjct: 66 AGMAAEAAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDKTPQAFNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|320103640|ref|YP_004179231.1| 30S ribosomal protein S11P [Isosphaera pallida ATCC 43644]
gi|319750922|gb|ADV62682.1| SSU ribosomal protein S11P [Isosphaera pallida ATCC 43644]
Length = 127
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + + R+N+ H+ +TFNNT +T+TDP G+T+ W+S VGF GSRK++P
Sbjct: 1 MAKANK--KKKTRRNVSRAIVHIKTTFNNTLVTVTDPTGDTLCWASSGTVGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + ++ A G+ +EVKV G G+GR+SA+ AL A G +I +I DVT + HNG
Sbjct: 59 FAAQRAAETAASAANKFGVKEVEVKVKGPGSGRESAITALHANGLSIKAIEDVTPLPHNG 118
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 119 CRPPKKRRV 127
>gi|71083782|ref|YP_266502.1| 30S ribosomal protein S11 [Candidatus Pelagibacter ubique HTCC1062]
gi|91763182|ref|ZP_01265146.1| ribosomal protein S11 [Candidatus Pelagibacter ubique HTCC1002]
gi|91207666|sp|Q4FLP0|RS11_PELUB RecName: Full=30S ribosomal protein S11
gi|71062895|gb|AAZ21898.1| ribosomal protein S11 [Candidatus Pelagibacter ubique HTCC1062]
gi|91717595|gb|EAS84246.1| ribosomal protein S11 [Candidatus Pelagibacter ubique HTCC1002]
Length = 150
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 87/115 (75%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI++G A+V STFNNT I+I D +GN I+W+S GF GSRK++P+AAQ+A D ++KA
Sbjct: 36 NILNGIAYVQSTFNNTIISIADTNGNVISWASAGQKGFKGSRKSTPYAAQIAADSAASKA 95
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+GM +L V+V G G+GR++ALRAL+A GF I+SI D T + HNG RP K+RR+
Sbjct: 96 LEYGMKTLSVEVKGPGSGRETALRALQARGFKILSIKDTTPMPHNGVRPPKKRRV 150
>gi|256380569|ref|YP_003104229.1| 30S ribosomal protein S11 [Actinosynnema mirum DSM 43827]
gi|255924872|gb|ACU40383.1| ribosomal protein S11 [Actinosynnema mirum DSM 43827]
Length = 135
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G+AH+ STFNNT ++ITDP GN I+W+S VGF GSRK++PFAAQ+A ++ + KA
Sbjct: 21 NISHGQAHIKSTFNNTIVSITDPLGNVISWASAGHVGFKGSRKSTPFAAQMAAENAARKA 80
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++V V G G+GR++A+R+L+A G + +I DVT HNGCRP KRRR+
Sbjct: 81 AEHGVRKVDVFVKGPGSGRETAIRSLQAAGLEVGTIQDVTPQPHNGCRPPKRRRV 135
>gi|188528083|ref|YP_001910770.1| 30S ribosomal protein S11 [Helicobacter pylori Shi470]
gi|308183405|ref|YP_003927532.1| 30S ribosomal protein S11 [Helicobacter pylori PeCan4]
gi|226708377|sp|B2UV58|RS11_HELPS RecName: Full=30S ribosomal protein S11
gi|188144323|gb|ACD48740.1| 30S ribosomal protein S11 [Helicobacter pylori Shi470]
gi|308065590|gb|ADO07482.1| 30S ribosomal protein S11 [Helicobacter pylori PeCan4]
Length = 131
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRAL-RAIGFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ G ++ I D+T + H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGTTEGVKVLWIKDITPLPH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|260780681|ref|YP_003227043.1| 30S ribosomal protein S11 [Bryopsis hypnoides]
gi|260176759|gb|ACX33768.1| 30S ribosomal protein S11 [Bryopsis hypnoides]
Length = 130
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRN-RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M +I N R ++ I G ++ S+FNNT I++T+ + W+S GF G+RK +
Sbjct: 1 MLSEGQKITNIRRKRKISKGIIYIQSSFNNTIISLTNLKSEVLFWASSGSCGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PF+A+VA D A + G+ +++V + G G GR++A+R+L+ F I+ ICD T I HN
Sbjct: 61 PFSAKVAIDKIIKFANDQGIKTVQVILKGPGPGRETAIRSLQKSNFEILLICDRTAIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|294790437|ref|ZP_06755595.1| 30S ribosomal protein S11 [Scardovia inopinata F0304]
gi|294458334|gb|EFG26687.1| 30S ribosomal protein S11 [Scardovia inopinata F0304]
Length = 132
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 59/127 (46%), Positives = 90/127 (70%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ + R ++RK++ G+AH+ STFNNT I+ITDP G ++W+S VGF GSRK++P+A
Sbjct: 6 QAARKPRRKDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYA 65
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + + KAQ HG+ ++V V G G+GR++A+R+L++ G + SI D T A NG R
Sbjct: 66 AGMAAEAAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDRTPQAFNGVR 125
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 126 PPKRRRV 132
>gi|139387484|ref|YP_001122839.1| ribosomal protein S11 [Phaseolus vulgaris]
gi|152060524|sp|A4GGD8|RR11_PHAVU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|112031006|gb|ABH88118.1| ribosomal protein S11 [Phaseolus vulgaris]
gi|158187118|gb|ABW22751.1| ribosomal protein S11 [Phaseolus vulgaris]
Length = 138
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIRNRER---------KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K + +R+ + I G HV ++FNNT +TITD G I+WSS G
Sbjct: 1 MAKYIPKTGSRKNVRIGSRNHTRKIPKGIIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM E+ + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEIMIKGPGLGRDAALRAIRRSGILLNFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCR K+RR+
Sbjct: 121 DVTPMPHNGCRSPKKRRV 138
>gi|152060572|sp|A1R8R6|RS11_ARTAT RecName: Full=30S ribosomal protein S11
Length = 142
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 65/135 (48%), Positives = 94/135 (69%), Gaps = 9/135 (6%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNT---------IAWSSPKVVGFSG 54
+ + R +++KNI G+AH+ STFNNT ++ITDP+G I+W+S VGF G
Sbjct: 8 AVRKPRRKDKKNIALGQAHIKSTFNNTIVSITDPNGAVSITDPNGAVISWASAGEVGFKG 67
Query: 55 SRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVT 114
SRK++PFAAQ+A + + +AQ HG+ ++V V G G+GR++A+R+L+A G + SI DVT
Sbjct: 68 SRKSTPFAAQMAAEAAAKRAQEHGLRKVDVFVKGPGSGRETAIRSLQAAGLEVGSIQDVT 127
Query: 115 MIAHNGCRPRKRRRI 129
AHNGCRP KRRR+
Sbjct: 128 PSAHNGCRPPKRRRV 142
>gi|15674051|ref|NP_268226.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. lactis Il1403]
gi|116513028|ref|YP_811935.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. cremoris SK11]
gi|125625116|ref|YP_001033599.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492733|ref|YP_003354713.1| 50S ribosomal protein S11P [Lactococcus lactis subsp. lactis KF147]
gi|32172402|sp|Q9CDY2|RS11_LACLA RecName: Full=30S ribosomal protein S11
gi|123025124|sp|Q02W50|RS11_LACLS RecName: Full=30S ribosomal protein S11
gi|152060595|sp|A2RNM8|RS11_LACLM RecName: Full=30S ribosomal protein S11
gi|12725121|gb|AAK06167.1|AE006436_16 30S ribosomal protein S11 [Lactococcus lactis subsp. lactis Il1403]
gi|116108682|gb|ABJ73822.1| SSU ribosomal protein S11P [Lactococcus lactis subsp. cremoris
SK11]
gi|124493924|emb|CAL98919.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376385|gb|ADA65871.1| SSU ribosomal protein S11P [Lactococcus lactis subsp. lactis KF147]
gi|300071924|gb|ADJ61324.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|326407605|gb|ADZ64676.1| 30S ribosomal protein S11 [Lactococcus lactis subsp. lactis CV56]
Length = 127
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + R +KNI SG H+ STFNNT + ITD HGN +AWSS +GF GS+K++P
Sbjct: 1 MAKITR--KRRVKKNIESGIVHIQSTFNNTIVMITDVHGNALAWSSAGALGFKGSKKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A++ + AQ G+ ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 59 FAAQMASEAAAKAAQEQGLKTVSVTVKGPGSGRESAIRALAAAGLNVTSISDVTPVPHNG 118
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 119 ARPPKRRRV 127
>gi|172038951|ref|YP_001805452.1| 30S ribosomal protein S11 [Cyanothece sp. ATCC 51142]
gi|171700405|gb|ACB53386.1| 30S ribosomal protein S11 [Cyanothece sp. ATCC 51142]
Length = 110
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 60/109 (55%), Positives = 77/109 (70%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
AH+ STFNNT +TI+D G+ I+WSS GF G++K +PFAAQ A D + +A + GM
Sbjct: 2 AHIQSTFNNTIVTISDTKGDVISWSSAGASGFKGAKKGTPFAAQTAADSAARRAIDQGMR 61
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+EV VSG GAGR++A+RAL+ G I I DVT I HNGCRP KRRR+
Sbjct: 62 QIEVMVSGPGAGRETAIRALQGAGLEITLIRDVTPIPHNGCRPPKRRRV 110
>gi|269218964|ref|ZP_06162818.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212075|gb|EEZ78415.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 136
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 85/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+V+G+AH+ STFNNT ++ITDP+G IA S VGF GSRK++P+AAQ+A ++ + A
Sbjct: 22 NVVAGQAHIKSTFNNTIVSITDPNGAVIASCSSGQVGFKGSRKSTPYAAQLAAENAARAA 81
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM ++V V G G+GR++A+R+L A G + SI DVT A+NGCRP KRRR+
Sbjct: 82 MEHGMKKVDVFVKGPGSGRETAIRSLTASGLEVTSISDVTPQAYNGCRPPKRRRV 136
>gi|189095414|ref|YP_001936427.1| ribosomal protein S11 [Heterosigma akashiwo]
gi|224493278|sp|B2XTD5|RR11_HETA2 RecName: Full=30S ribosomal protein S11, chloroplastic
gi|224493279|sp|B2XTU1|RR11_HETA4 RecName: Full=30S ribosomal protein S11, chloroplastic
gi|157694757|gb|ABV66033.1| 30S ribosomal protein S11 [Heterosigma akashiwo]
gi|157777988|gb|ABV70174.1| 30S ribosomal protein S11 [Heterosigma akashiwo]
Length = 127
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/108 (48%), Positives = 76/108 (70%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSS 81
H+ ++FNNT +TITD GNT++ S VGF G+RK +PFAAQ+A++ + KA +G+
Sbjct: 20 HIQASFNNTIVTITDLGGNTLSTGSAGAVGFKGARKGTPFAAQLASEKAAEKATEYGLKK 79
Query: 82 LEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+EV V G G+GR++A+RA++ I +I D+T I NGCRP KRRR+
Sbjct: 80 VEVLVKGQGSGRETAVRAIQNSDIEITAITDITSIPFNGCRPPKRRRV 127
>gi|289066859|ref|YP_003434377.1| ribosomal protein S11 [Vigna radiata]
gi|259020046|gb|ACV90244.1| ribosomal protein S11 [Vigna radiata]
Length = 138
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIRNRER---------KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS + +R+ + I G HV ++FNNT +TITD G I+WSS G
Sbjct: 1 MAKSIPKKGSRKNVRIGSRNHTRKIPKGIIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM E+ + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEIMIKGPGLGRDAALRAIRRSGILLNFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCR K+RR+
Sbjct: 121 DVTPMPHNGCRSPKKRRV 138
>gi|224179502|ref|YP_002601033.1| ribosomal protein S11 [Monomastix sp. OKE-1]
gi|217314545|gb|ACK36888.1| ribosomal protein S11 [Monomastix sp. OKE-1]
Length = 125
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 58/124 (46%), Positives = 85/124 (68%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
++ R +K + +G H+ +TFNNT +T+TDP+GN I+WSS GF G+RK++PFAAQ
Sbjct: 2 AKARKVLKKKVQTGIVHIRATFNNTLVTVTDPNGNVISWSSAGSCGFKGARKSTPFAAQE 61
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A ++ G+ +EV+VSG G+GR++ALRA++A G I I D+T I HNGCR K
Sbjct: 62 AATAAIRQSIEQGLRKVEVQVSGPGSGRETALRAIQAAGVGIRLIRDITPIPHNGCRAPK 121
Query: 126 RRRI 129
+RR+
Sbjct: 122 KRRV 125
>gi|220903958|ref|YP_002479270.1| ribosomal protein S11 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254765380|sp|B8IYL5|RS11_DESDA RecName: Full=30S ribosomal protein S11
gi|219868257|gb|ACL48592.1| ribosomal protein S11 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 129
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + ++ +E+K++ G AH+ ++FNNT IT TD GN ++W+S GF GSRK++P
Sbjct: 1 MARPKKVVKKKEKKSVPVGIAHIQASFNNTIITFTDTRGNAVSWASSGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + + KAQ++GM ++ + V G G+GR++A+RA+ A G + I DVT I HNG
Sbjct: 61 FAAQVAAETAARKAQDNGMRTVGIYVQGPGSGREAAMRAISAAGMKVAFIRDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|254779837|ref|YP_003057943.1| 30S ribosomal protein S11 [Helicobacter pylori B38]
gi|254001749|emb|CAX29980.1| 30S ribosomal subunit protein S11 [Helicobacter pylori B38]
Length = 131
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT ITITD GN I WS+ +GF GS+K++P+AAQ A + +KA+ HG
Sbjct: 20 GVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKSTPYAAQQAVESALSKAKEHG 79
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ A G ++ I D+T + HNGCRP KRRR+
Sbjct: 80 VKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLPHNGCRPPKRRRV 131
>gi|289548516|ref|YP_003473504.1| 30S ribosomal protein S11 [Thermocrinis albus DSM 14484]
gi|289182133|gb|ADC89377.1| 30S ribosomal protein S11 [Thermocrinis albus DSM 14484]
Length = 123
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 58/121 (47%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++++ + G H++STFNNT +TITD GNT+ W S VGF G+RK++P+AAQ+A
Sbjct: 3 KKQKRTVTQGIVHILSTFNNTIVTITDMQGNTLVWESGGTVGFKGTRKSTPYAAQLAAQK 62
Query: 70 CSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A +G+ +EV+V G GAGR+SALRA+ A G + I DVT I HNGCRP +RR
Sbjct: 63 AAKRAMQEYGLQEVEVRVKGAGAGRESALRAIFASGLKVKVIRDVTPIPHNGCRPPAKRR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|78357276|ref|YP_388725.1| 30S ribosomal protein S11 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|91207743|sp|Q30Z66|RS11_DESDG RecName: Full=30S ribosomal protein S11
gi|78219681|gb|ABB39030.1| SSU ribosomal protein S11P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 129
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 90/129 (69%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +E+K+I G AH+ +TFNNT IT TD GNT++W+S GF GSRK++P
Sbjct: 1 MARPKRVGKKKEKKSIPVGVAHIQATFNNTIITFTDTRGNTVSWASAGQSGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A D + +AQ +GM ++ + V G G+GR+SA+RA+ A GF + I D+T I HNG
Sbjct: 61 FAAQIAADQAARRAQENGMRTVGIFVKGPGSGRESAMRAINAAGFKVAFIRDITPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|326692213|ref|ZP_08229218.1| 30S ribosomal protein S11 [Leuconostoc argentinum KCTC 3773]
Length = 128
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIETGVAHIHSTFNNTIVMITDVQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A M ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKSAMEMNMRTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|170017920|ref|YP_001728839.1| ribosomal protein S11 [Leuconostoc citreum KM20]
gi|169804777|gb|ACA83395.1| Ribosomal protein S11 [Leuconostoc citreum KM20]
Length = 128
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIEAGVAHIHSTFNNTIVMITDVQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A M ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKGAMEMNMRTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|156618856|ref|YP_001430137.1| ribosomal protein S11 [Cuscuta reflexa]
gi|171769790|sp|A7M996|RR11_CUSRE RecName: Full=Plastid 30S ribosomal protein S11
gi|156556041|emb|CAM98424.1| ribosomal protein S11 [Cuscuta reflexa]
Length = 138
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIRNR---------ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS RI +R + I G HV ++F+NT +T+TD G ++WSS G
Sbjct: 1 MAKSIPRISSRRNGRIGSGNNVRRIPKGVIHVQASFHNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAATNAIRTVVDQGMLRAEVLIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
D+T + HNGCRP K+RR+
Sbjct: 121 DLTPMPHNGCRPPKQRRV 138
>gi|257792536|ref|YP_003183142.1| 30S ribosomal protein S11 [Eggerthella lenta DSM 2243]
gi|317490402|ref|ZP_07948886.1| 30S ribosomal protein S11 [Eggerthella sp. 1_3_56FAA]
gi|325833481|ref|ZP_08165930.1| 30S ribosomal protein S11 [Eggerthella sp. HGA1]
gi|257476433|gb|ACV56753.1| ribosomal protein S11 [Eggerthella lenta DSM 2243]
gi|316910537|gb|EFV32162.1| 30S ribosomal protein S11 [Eggerthella sp. 1_3_56FAA]
gi|325485405|gb|EGC87874.1| 30S ribosomal protein S11 [Eggerthella sp. HGA1]
Length = 132
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/124 (55%), Positives = 89/124 (71%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+RI+ ERKNI G AH+ STFNNT ++ITDP GN I+W S VGF GSRK++PFAAQ+
Sbjct: 9 TRIKRSERKNIAVGAAHIKSTFNNTIVSITDPQGNVISWQSAGTVGFKGSRKSTPFAAQM 68
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + A HG+ + V V G G+GR++A+R+L+A G I SI D T I HNGCRPRK
Sbjct: 69 AAEAAAKTAMEHGLRKVSVFVKGPGSGRETAIRSLQAAGLEIASIQDCTPIPHNGCRPRK 128
Query: 126 RRRI 129
RRR+
Sbjct: 129 RRRV 132
>gi|307720211|ref|YP_003891351.1| 30S ribosomal protein S11P [Sulfurimonas autotrophica DSM 16294]
gi|306978304|gb|ADN08339.1| SSU ribosomal protein S11P [Sulfurimonas autotrophica DSM 16294]
Length = 130
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/116 (52%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G H+ ++FNNT +TITD GN IAWSS +GF GS+K++PFAAQ A +D AKA
Sbjct: 15 NISRGIVHIAASFNNTLVTITDEMGNMIAWSSAGSLGFKGSKKSTPFAAQAAVEDAVAKA 74
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HG+ L +KV G G+GR++A++A+ AI G + + DVT + HNGCR KRRR+
Sbjct: 75 QVHGIKELGIKVQGPGSGRETAVKAVGAIEGIRVTFMKDVTPLPHNGCRAPKRRRV 130
>gi|300174007|ref|YP_003773173.1| 30S ribosomal protein S11 [Leuconostoc gasicomitatum LMG 18811]
gi|299888386|emb|CBL92354.1| 30S ribosomal protein S11 [Leuconostoc gasicomitatum LMG 18811]
Length = 128
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIEAGVAHIHSTFNNTIVMITDVQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A MS++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKSAMEMNMSTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|68536850|ref|YP_251555.1| 30S ribosomal protein S11 [Corynebacterium jeikeium K411]
gi|260579208|ref|ZP_05847098.1| 30S ribosomal protein S11 [Corynebacterium jeikeium ATCC 43734]
gi|91207739|sp|Q4JTC0|RS11_CORJK RecName: Full=30S ribosomal protein S11
gi|68264449|emb|CAI37937.1| 30S ribosomal protein S11 [Corynebacterium jeikeium K411]
gi|258602694|gb|EEW15981.1| 30S ribosomal protein S11 [Corynebacterium jeikeium ATCC 43734]
Length = 134
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
R +KN+ +G A++ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+
Sbjct: 11 RTGRRVVKKNVANGHAYIKSTFNNTIVSITDPKGAVISWASSGHVGFKGSRKSTPFAAQM 70
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + KA +HGM ++V V G G+GR++A+R+L G + +I DVT HNGCRP K
Sbjct: 71 AAESAARKAMDHGMKKVDVFVKGPGSGRETAIRSLSTAGLEVGTIADVTPQPHNGCRPPK 130
Query: 126 RRRI 129
RRR+
Sbjct: 131 RRRV 134
>gi|225165489|ref|ZP_03727315.1| Ribosomal protein S11-like protein [Opitutaceae bacterium TAV2]
gi|224800266|gb|EEG18670.1| Ribosomal protein S11-like protein [Opitutaceae bacterium TAV2]
Length = 211
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/121 (52%), Positives = 85/121 (70%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R + KN+ SG A V+++FNNT ++ITD G IAWSS F GSRK++ +AAQV
Sbjct: 91 RAKGSKNVTSGIATVLASFNNTIVSITDAKGQVIAWSSAGKCNFRGSRKSTAYAAQVVAQ 150
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
D + A +HG+ + +++SG G GRDSA+RAL+AIG I SI DVT + HNGCRPRKRRR
Sbjct: 151 DAARNAMSHGLKDVTIRLSGPGLGRDSAVRALQAIGLEINSIIDVTPVPHNGCRPRKRRR 210
Query: 129 I 129
+
Sbjct: 211 V 211
>gi|290487496|gb|ADD30132.1| ribosomal protein S11 [Phoradendron serotinum]
Length = 137
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++ I G HV ++FNNT +T+TD G ++WSS F G++K +PFAAQ A ++
Sbjct: 19 KKKSTRIPKGIIHVQASFNNTIVTVTDIRGQVVSWSSAGTC-FQGAKKGTPFAAQTAAEN 77
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +V + G G GRD++LRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 78 AIRTVVDQGMQRAKVMIKGPGLGRDASLRAIRRSGILLSFVQDVTPMPHNGCRPPKKRRL 137
>gi|15835409|ref|NP_297168.1| 30S ribosomal protein S11 [Chlamydia muridarum Nigg]
gi|270285589|ref|ZP_06194983.1| 30S ribosomal protein S11 [Chlamydia muridarum Nigg]
gi|270289599|ref|ZP_06195901.1| 30S ribosomal protein S11 [Chlamydia muridarum Weiss]
gi|301336985|ref|ZP_07225187.1| 30S ribosomal protein S11 [Chlamydia muridarum MopnTet14]
gi|14195203|sp|Q9PJN3|RS11_CHLMU RecName: Full=30S ribosomal protein S11
gi|7190823|gb|AAF39598.1| ribosomal protein S11 [Chlamydia muridarum Nigg]
Length = 132
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSPSR---IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M K+ ++ ++ ++ KNI SG HV +TFNNT +TITDP GN I+W+S VG+SGSRK
Sbjct: 1 MVKNQTQKKGVKRKQVKNIPSGVVHVKATFNNTIVTITDPAGNVISWASAGKVGYSGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+S FAA VA D + A + G+ +EV + G GAGR+SA+RAL + G + I D T +
Sbjct: 61 SSAFAATVAAQDAAKTAMSSGLKEVEVSLKGTGAGRESAVRALISSGLIVSVIRDETPVP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRPRKRRR+
Sbjct: 121 HNGCRPRKRRRV 132
>gi|116617353|ref|YP_817724.1| 30S ribosomal protein S11 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122272446|sp|Q03ZM1|RS11_LEUMM RecName: Full=30S ribosomal protein S11
gi|116096200|gb|ABJ61351.1| SSU ribosomal protein S11P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 128
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI SG AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIESGVAHIHSTFNNTIVMITDAQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A M ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKSAMEINMRTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|46446066|ref|YP_007431.1| 30S ribosomal protein S11 [Candidatus Protochlamydia amoebophila
UWE25]
gi|59798734|sp|Q6ME43|RS11_PARUW RecName: Full=30S ribosomal protein S11
gi|46399707|emb|CAF23156.1| probable 30S ribosomal protein S11 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 135
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ SG AHV +TFNNT I ITDP G I+W+S V FSGSRK+S FAA VA D + A
Sbjct: 21 NVPSGIAHVKATFNNTIIAITDPSGRVISWASAGKVNFSGSRKSSAFAATVAAQDAAKTA 80
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM +EV + G GAGR+SA+R L++ G TI +I D T + HNGCRPRKRRR+
Sbjct: 81 SSLGMKEVEVNLKGPGAGRESAVRGLQSAGLTITAIRDTTPVPHNGCRPRKRRRV 135
>gi|29839881|ref|NP_828987.1| 30S ribosomal protein S11 [Chlamydophila caviae GPIC]
gi|33301632|sp|Q824N2|RS11_CHLCV RecName: Full=30S ribosomal protein S11
gi|29834228|gb|AAP04865.1| ribosomal protein S11 [Chlamydophila caviae GPIC]
Length = 132
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 87/126 (69%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT ++ITDP GNTI+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQLKNIPSGVVHVKATFNNTIVSITDPAGNTISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
+A D + A N G+ +EV + G GAGR+SA+RAL A G + I D T + HNGCRP
Sbjct: 67 TMAAQDAAKNAMNSGLKEVEVCLKGTGAGRESAVRALIASGLVVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|291286337|ref|YP_003503153.1| 30S 30S ribosomal protein S11 [Denitrovibrio acetiphilus DSM 12809]
gi|290883497|gb|ADD67197.1| 30S ribosomal protein S11 [Denitrovibrio acetiphilus DSM 12809]
Length = 127
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ STFNNT +T TD +GN + W++ VGF SRK++PFAAQ+A + + KA
Sbjct: 13 NVPKGVAHIRSTFNNTIVTFTDVNGNAVTWAAGGGVGFKNSRKSTPFAAQIAAEQAAKKA 72
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++GM +EV V G GAGR+SA+RA+ A G I I DVT + HNGCRPRK+RR+
Sbjct: 73 VDNGMREVEVNVKGPGAGRESAIRAIAAAGLKITVIRDVTPVPHNGCRPRKKRRV 127
>gi|328955887|ref|YP_004373220.1| SSU ribosomal protein S11P [Coriobacterium glomerans PW2]
gi|328456211|gb|AEB07405.1| SSU ribosomal protein S11P [Coriobacterium glomerans PW2]
Length = 134
Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/126 (56%), Positives = 91/126 (72%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
P+R++ ERKNI G+AH+ STFNNT I+ITDP GN I W S VGF GSRK++PFAA
Sbjct: 9 RPTRVKRAERKNIAVGQAHIRSTFNNTIISITDPQGNVITWRSSGTVGFKGSRKSTPFAA 68
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + C+ A HGM + V V G G+GR++A+R+L+A G I SI D T I HNGCRP
Sbjct: 69 QMAAEACAKAAMEHGMHKVAVFVKGPGSGRETAIRSLQAAGLEIASIQDKTPIPHNGCRP 128
Query: 124 RKRRRI 129
+KRRR+
Sbjct: 129 KKRRRV 134
>gi|283953795|ref|ZP_06371326.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 414]
gi|283794836|gb|EFC33574.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 414]
Length = 130
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/112 (49%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT +T+TD GNTIAWSS +GF GS+K++P+AAQ A +D KA+ HG
Sbjct: 19 GIVYISATFNNTMVTVTDEMGNTIAWSSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ AI G + + D+T +AHNGCRP KRRR+
Sbjct: 79 IKEVGIKVQGPGSGRETAVKSVGAIEGIKVTFLKDITPLAHNGCRPPKRRRV 130
>gi|241895164|ref|ZP_04782460.1| ribosomal protein S11 [Weissella paramesenteroides ATCC 33313]
gi|241871470|gb|EER75221.1| ribosomal protein S11 [Weissella paramesenteroides ATCC 33313]
Length = 128
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 81/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I SG AH+ +TFNNT + ITD GN +AWSS +GF GSRK++PFAAQ+A + + A
Sbjct: 15 IESGVAHIHATFNNTIVMITDVQGNAVAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAM 74
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+GM ++EV V G G+GR++A+R+L A G + SI DVT + HNG RP KRRR+
Sbjct: 75 ENGMKTVEVTVKGPGSGREAAIRSLAAAGLDVSSIKDVTPVPHNGSRPPKRRRV 128
>gi|325280943|ref|YP_004253485.1| 30S ribosomal protein S11 [Odoribacter splanchnicus DSM 20712]
gi|324312752|gb|ADY33305.1| 30S ribosomal protein S11 [Odoribacter splanchnicus DSM 20712]
Length = 130
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + R K G+AHV S+FNN I++T+ G I+WSS +GF GS+KN+
Sbjct: 1 MAKKSTSSNKKRLVKVEAVGQAHVHSSFNNIIISLTNSTGQVISWSSAGKMGFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A DC+ A + GM +V VSG G GR+SA+R++ A G + I DVT + HN
Sbjct: 61 PYAAQMAAADCAKVAFDLGMRKAKVYVSGPGNGRESAIRSIHASGIEVAEIIDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|296111453|ref|YP_003621835.1| 30S ribosomal protein S11 [Leuconostoc kimchii IMSNU 11154]
gi|295832985|gb|ADG40866.1| 30S ribosomal protein S11 [Leuconostoc kimchii IMSNU 11154]
Length = 128
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAARTTR-KRRVKKNIEAGVAHIHSTFNNTIVMITDVQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A+ MS++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKSAKEMNMSTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|256826598|ref|YP_003150557.1| 30S ribosomal protein S11P [Cryptobacterium curtum DSM 15641]
gi|256582741|gb|ACU93875.1| SSU ribosomal protein S11P [Cryptobacterium curtum DSM 15641]
Length = 132
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MPKSP---SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M + +RI+ ERKNI G AH+ STFNNT ++ITDP GN I+W S VGF GSRK
Sbjct: 1 MAQKKNVRTRIKRSERKNITVGAAHIKSTFNNTIVSITDPQGNVISWQSAGTVGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + + A HG+ + V V G G+GR++A+R+L+A G + SI D T I
Sbjct: 61 STPFAAQMAAEAAAKTAMEHGVKKISVFVKGPGSGRETAIRSLQAAGLEVASIQDCTPIP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPAKRRRV 132
>gi|39938712|ref|NP_950478.1| 30S ribosomal protein S11 [Onion yellows phytoplasma OY-M]
gi|59798752|sp|Q6YQZ6|RS11_ONYPE RecName: Full=30S ribosomal protein S11
gi|39721821|dbj|BAD04311.1| ribosomal protein S11 [Onion yellows phytoplasma OY-M]
Length = 128
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/114 (50%), Positives = 79/114 (69%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ +TFNNT +TITD +GN + WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 14 NVPLGIAHIHTTFNNTIVTITDLNGNAVTWSSAGALGFKGSRKSTPFAAQLAAEAVAKAA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
HGM +E ++G G GR++A+R+L+A G I +I DVT + HNGCRP K R
Sbjct: 74 MEHGMVKVETFITGPGPGREAAIRSLQAAGLEITAIKDVTAVPHNGCRPPKPPR 127
>gi|118411079|ref|YP_874474.1| 30S ribosomal protein S11 [Phaeodactylum tricornutum]
gi|125987670|sp|A0T0J9|RR11_PHATC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|116739826|gb|ABK20697.1| 30S ribosomal protein S11 [Phaeodactylum tricornutum]
Length = 130
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M ++ + +E+ + SG H+ STFNNT +TIT+ G+TI+W+S GF G+RK++
Sbjct: 1 MAQTTRKSTIRKEKNSFTSGVVHIQSTFNNTIVTITNLTGDTISWASAGSSGFKGARKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A + + +A + GM ++E+ V G G+GR++A+RA+ GF I+SI D+T + HN
Sbjct: 61 PFAAQTAAEKAALEALSTGMKTVEILVKGQGSGRETAIRAIEGAGFDIISIQDITSVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|172072880|ref|YP_001806641.1| ribosomal protein S11 [Cryptomeria japonica]
gi|224493275|sp|B1VKC8|RR11_CRYJA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|171854899|dbj|BAG16639.1| ribosomal protein S11 [Cryptomeria japonica]
gi|239794268|dbj|BAH73265.1| ribosomal protein S11 [Cryptomeria japonica]
gi|239794350|dbj|BAH73346.1| ribosomal protein S11 [Cryptomeria japonica]
Length = 132
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
MP+ +R + + + I+ G +V ++F NT +T+TD G ++WSS GF G+++
Sbjct: 1 MPRRATRRFLPRKTKHRILKGVIYVRASFRNTIVTVTDTRGQAVSWSSAGACGFKGTKRR 60
Query: 59 SPFAAQVATDDCSAKAQNHGM-SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
SPFAAQ A + N G+ EV +SG G GRD+ALRA+ G + + DVT +
Sbjct: 61 SPFAAQTAAANVVDTLVNQGLLKEAEVMISGPGPGRDTALRAIAQSGIQLSYVRDVTPMP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|89898700|ref|YP_515810.1| 30S ribosomal protein S11 [Chlamydophila felis Fe/C-56]
gi|123763200|sp|Q252X3|RS11_CHLFF RecName: Full=30S ribosomal protein S11
gi|89332072|dbj|BAE81665.1| 30S ribosomal protein S11 [Chlamydophila felis Fe/C-56]
Length = 132
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT ++ITDP GN I+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQLKNIPSGVVHVKATFNNTIVSITDPAGNVISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A N G+ +EV + G GAGR+SA+RAL A G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKNAMNSGLKEVEVCLKGTGAGRESAVRALIAAGLVVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|257126746|ref|YP_003164860.1| 30S ribosomal protein S11 [Leptotrichia buccalis C-1013-b]
gi|257050685|gb|ACV39869.1| ribosomal protein S11 [Leptotrichia buccalis C-1013-b]
Length = 129
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 85/128 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+ + ++ KNI +G A++ STFNNT +TITD G + W S GF G++K +P
Sbjct: 1 MAKRPATSKKKKLKNIPNGIAYIHSTFNNTVVTITDSEGKVVIWKSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +E+K+ G G+GR++++R+++A G + I D+T + HNG
Sbjct: 61 FAAQIAAEQAAQVAIENGMKQIEIKIKGPGSGREASIRSIQATGLEVTRIVDITPVPHNG 120
Query: 121 CRPRKRRR 128
RP K+RR
Sbjct: 121 ARPPKKRR 128
>gi|154147976|ref|YP_001405814.1| 30S ribosomal protein S11 [Campylobacter hominis ATCC BAA-381]
gi|166231810|sp|A7HZX3|RS11_CAMHC RecName: Full=30S ribosomal protein S11
gi|153803985|gb|ABS50992.1| ribosomal protein S11 [Campylobacter hominis ATCC BAA-381]
Length = 130
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + +K+I G ++ +TFNNT +T+TD GN IAWSS + F GS+K++P
Sbjct: 1 MAEKKILKKKVVKKSIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGALNFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A +D KA+ HG+ + +KV G G+GR++A++++ AI G + D+T +AHN
Sbjct: 61 YAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSIGAIEGIKVTFFKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|62184757|ref|YP_219542.1| 30S ribosomal protein S11 [Chlamydophila abortus S26/3]
gi|81313063|sp|Q5L700|RS11_CHLAB RecName: Full=30S ribosomal protein S11
gi|62147824|emb|CAH63570.1| putative 30s ribosomal protein s11 [Chlamydophila abortus S26/3]
Length = 132
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 87/126 (69%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT ++ITDP GNTI+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQLKNIPSGIVHVKATFNNTIVSITDPAGNTISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A N G+ +EV + G GAGR+SA+RAL A G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKIAMNSGLKEVEVCLKGTGAGRESAVRALIAAGLVVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|153951410|ref|YP_001398873.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. doylei
269.97]
gi|166231811|sp|A7H5U3|RS11_CAMJD RecName: Full=30S ribosomal protein S11
gi|152938856|gb|ABS43597.1| ribosomal protein S11 [Campylobacter jejuni subsp. doylei 269.97]
Length = 130
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/112 (47%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P+AAQ A +D KA+ HG
Sbjct: 19 GIVYISATFNNTMVTVTDEMGNAIAWSSAGSLGFKGSKKSTPYAAQQAVEDALNKAKEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ A+ G + + D+T +AHNGCRP KRRR+
Sbjct: 79 IKEVGIKVQGPGSGRETAVKSVGAMEGIKVTFLKDITPLAHNGCRPPKRRRV 130
>gi|148925737|ref|ZP_01809425.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845747|gb|EDK22838.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 130
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P+AAQ A +D KA+ HG
Sbjct: 19 GIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ A+ G I + D+T +AHNGCRP KRRR+
Sbjct: 79 IKEVGIKVQGPGSGRETAVKSVGAMEGIKITFLKDITPLAHNGCRPPKRRRV 130
>gi|329942431|ref|ZP_08291241.1| ribosomal S11 family protein [Chlamydophila psittaci Cal10]
gi|313847668|emb|CBY16656.1| putative 30s ribosomal protein s11 [Chlamydophila psittaci RD1]
gi|325506589|gb|ADZ18227.1| 30S ribosomal protein S11 [Chlamydophila psittaci 6BC]
gi|328815341|gb|EGF85329.1| ribosomal S11 family protein [Chlamydophila psittaci Cal10]
gi|328914305|gb|AEB55138.1| ribosomal protein S11 [Chlamydophila psittaci 6BC]
Length = 132
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/126 (53%), Positives = 87/126 (69%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT ++ITDP GNTI+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQLKNIPSGVVHVKATFNNTIVSITDPAGNTISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A N G+ +EV + G GAGR+SA+RAL A G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKIAMNSGLKEVEVCLKGTGAGRESAVRALIAAGLVVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|189162304|ref|YP_001936550.1| ribosomal protein S11 [Fagopyrum esculentum subsp. ancestrale]
gi|224493276|sp|B2XWQ6|RR11_FAGEA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|166065390|gb|ABY79765.1| ribosomal protein S11 [Fagopyrum esculentum subsp. ancestrale]
Length = 138
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + + G +V + FNNT +T+TD G ++W+S G
Sbjct: 1 MAKPIPRIGSQRNRRINSRKNARKMPKGVIYVQAGFNNTIVTVTDVRGRVVSWASAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+++ +PFAAQ A + K + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGAKRGTPFAAQTAAGNAIRKVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|221221116|gb|ACM09219.1| 28S ribosomal protein S11, mitochondrial precursor [Salmo salar]
Length = 197
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 74/129 (57%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP S +R +K AH+ +T+NNT + +TD G + +S GF +K++P
Sbjct: 69 MPGQDSVLRWAGKKYEELPIAHIKATYNNTHVQVTDCEGQFMVRTSCGTEGFKNVKKSTP 128
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
AAQ A +AKA G++ + V V GLG GR SA++ L G +VSI D T + HNG
Sbjct: 129 IAAQTAGISAAAKATAVGVTFVRVLVKGLGPGRLSAIKGLTMGGLEVVSITDNTPVPHNG 188
Query: 121 CRPRKRRRI 129
CRPRK RRI
Sbjct: 189 CRPRKARRI 197
>gi|217032049|ref|ZP_03437549.1| hypothetical protein HPB128_16g9 [Helicobacter pylori B128]
gi|298735680|ref|YP_003728205.1| 30S ribosomal protein S11 [Helicobacter pylori B8]
gi|308185047|ref|YP_003929180.1| 30S ribosomal protein S11 [Helicobacter pylori SJM180]
gi|216946197|gb|EEC24805.1| hypothetical protein HPB128_16g9 [Helicobacter pylori B128]
gi|298354869|emb|CBI65741.1| small subunit ribosomal protein S11 [Helicobacter pylori B8]
gi|308060967|gb|ADO02863.1| 30S ribosomal protein S11 [Helicobacter pylori SJM180]
Length = 131
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVTAKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T ++H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGPGSGRETAIKSVGATEGVKVLWIKDITPLSH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|57238606|ref|YP_179737.1| 30S ribosomal protein S11 [Campylobacter jejuni RM1221]
gi|57504895|ref|ZP_00370870.1| ribosomal protein S11 [Campylobacter coli RM2228]
gi|86149273|ref|ZP_01067504.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152262|ref|ZP_01070473.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153109|ref|ZP_01071314.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88596270|ref|ZP_01099507.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 84-25]
gi|121612731|ref|YP_001001236.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
81-176]
gi|157415813|ref|YP_001483069.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
81116]
gi|218563182|ref|YP_002344962.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|283956977|ref|ZP_06374449.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 1336]
gi|305432398|ref|ZP_07401560.1| 30S ribosomal protein S11 [Campylobacter coli JV20]
gi|315125001|ref|YP_004067005.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|48474678|sp|Q9PM82|RS11_CAMJE RecName: Full=30S ribosomal protein S11
gi|81353182|sp|Q5HSJ8|RS11_CAMJR RecName: Full=30S ribosomal protein S11
gi|152060582|sp|A1W1J5|RS11_CAMJJ RecName: Full=30S ribosomal protein S11
gi|172047192|sp|A8FNQ5|RS11_CAMJ8 RecName: Full=30S ribosomal protein S11
gi|57019323|gb|EAL56025.1| ribosomal protein S11 [Campylobacter coli RM2228]
gi|57167410|gb|AAW36189.1| ribosomal protein S11 [Campylobacter jejuni RM1221]
gi|85840055|gb|EAQ57313.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840751|gb|EAQ58002.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843994|gb|EAQ61204.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249701|gb|EAQ72660.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191111|gb|EAQ95083.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360889|emb|CAL35690.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|157386777|gb|ABV53092.1| hypothetical protein C8J_1495 [Campylobacter jejuni subsp. jejuni
81116]
gi|283791478|gb|EFC30275.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 1336]
gi|284926788|gb|ADC29140.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|304444437|gb|EFM37088.1| 30S ribosomal protein S11 [Campylobacter coli JV20]
gi|307748450|gb|ADN91720.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni M1]
gi|315018723|gb|ADT66816.1| ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315059044|gb|ADT73373.1| SSU ribosomal protein S11p [Campylobacter jejuni subsp. jejuni S3]
gi|315927661|gb|EFV06992.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929464|gb|EFV08661.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 305]
gi|315931272|gb|EFV10242.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni 327]
Length = 130
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/112 (47%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT +T+TD GN IAWSS +GF GS+K++P+AAQ A +D KA+ HG
Sbjct: 19 GIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ A+ G + + D+T +AHNGCRP KRRR+
Sbjct: 79 IKEVGIKVQGPGSGRETAVKSVGAMEGIKVTFLKDITPLAHNGCRPPKRRRV 130
>gi|227431317|ref|ZP_03913370.1| ribosomal protein S11 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352910|gb|EEJ43083.1| ribosomal protein S11 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 128
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + R +KNI +G AH+ STFNNT + ITD GN +AWSS +GF GSRK++P
Sbjct: 1 MAGRTTR-KRRVKKNIEAGVAHIHSTFNNTIVMITDAQGNAVAWSSAGALGFKGSRKSTP 59
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A M ++ V V G G+GR+SA+RAL A G + SI DVT + HNG
Sbjct: 60 FAAQMAAEAAAKSAMEINMRTVAVTVKGPGSGRESAIRALAAAGLEVTSIKDVTPVPHNG 119
Query: 121 CRPRKRRRI 129
RP KRRR+
Sbjct: 120 SRPPKRRRV 128
>gi|210631178|ref|ZP_03296789.1| hypothetical protein COLSTE_00674 [Collinsella stercoris DSM 13279]
gi|210160145|gb|EEA91116.1| hypothetical protein COLSTE_00674 [Collinsella stercoris DSM 13279]
Length = 135
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 69/126 (54%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ +RI+ +RKNI G+AH+ STFNNT ++ITDP GN IAW S VGF GSRK++PFAA
Sbjct: 10 ASTRIKRADRKNISVGQAHIRSTFNNTIVSITDPAGNVIAWQSAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + C+ A HGM + V V G G+GR++A+R+L+A G + SI D T I HNGCRP
Sbjct: 70 QMAAEACAKAAMEHGMHKVAVFVKGPGSGRETAIRSLQAAGLEVSSIQDKTPIPHNGCRP 129
Query: 124 RKRRRI 129
+KRRR+
Sbjct: 130 KKRRRV 135
>gi|159161283|ref|YP_001542561.1| ribosomal protein S11 [Cuscuta exaltata]
gi|172048135|sp|A8W3F4|RR11_CUSEX RecName: Full=Plastid 30S ribosomal protein S11
gi|158938708|gb|ABW83725.1| ribosomal protein S11 [Cuscuta exaltata]
Length = 138
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS RI + + I G HV ++F+NT + +TD G ++WSS G
Sbjct: 1 MAKSIPRISSRRNGPIGSGKTVRRIPKGVIHVQASFHNTIVAVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAATKAIRTVVDQGMLRAEVLIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|94502523|ref|YP_588150.1| ribosomal protein S11 [Helianthus annuus]
gi|122231597|sp|Q1KXS6|RR11_HELAN RecName: Full=30S ribosomal protein S11, chloroplastic
gi|88656927|gb|ABD47178.1| ribosomal protein S11 [Helianthus annuus]
Length = 136
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 2 PKSPSRIR---NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
PK SR R + + I G H+ ++FNNT +T+TD G ++WSS GF G+R+
Sbjct: 6 PKKGSRGRISSRKSIRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFQGTRRG 65
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + GM EV + G G GRD+ALRA+R G + + DVT + H
Sbjct: 66 TPFAAQTAAANAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPH 125
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 126 NGCRPPKKRRV 136
>gi|32477617|ref|NP_870611.1| 30S ribosomal protein S11 [Rhodopirellula baltica SH 1]
gi|59798845|sp|Q7UIC6|RS11_RHOBA RecName: Full=30S ribosomal protein S11
gi|32448171|emb|CAD77688.1| 30S ribosomal protein S11 [Rhodopirellula baltica SH 1]
gi|327538949|gb|EGF25587.1| 30S ribosomal protein S11 [Rhodopirellula baltica WH47]
Length = 127
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ + R R+N+ +G AHV +TFNNT +TITD G+T+ W+S GF GSRK++P
Sbjct: 1 MAKTNK--KKRIRRNVSNGVAHVHATFNNTTVTITDAKGDTLCWASAGTSGFKGSRKSTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FA Q A + KA GM +EV+V G G+GR+SA+ AL+A G + I +VT I HNG
Sbjct: 59 FAGQCAAQQAAEKATKFGMRDVEVRVKGPGSGRESAITALQAAGLNVKLIEEVTPIPHNG 118
Query: 121 CRPRKRRRI 129
CRPRK+RR+
Sbjct: 119 CRPRKKRRV 127
>gi|116624176|ref|YP_826332.1| 30S ribosomal protein S11 [Candidatus Solibacter usitatus
Ellin6076]
gi|122253108|sp|Q01WB8|RS11_SOLUE RecName: Full=30S ribosomal protein S11
gi|116227338|gb|ABJ86047.1| SSU ribosomal protein S11P [Candidatus Solibacter usitatus
Ellin6076]
Length = 135
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 1 MPKSP------SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSG 54
M K+P + +E++ + +G H+ +TFNNT +TI+D GNTI+WSS +GF G
Sbjct: 1 MAKAPVKAGKKKSFKKKEKRVVHTGVVHIQATFNNTIVTISDQEGNTISWSSAGSLGFRG 60
Query: 55 SRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVT 114
SRK +PFAAQ A + KA G+ +EV+VSG G+GR+SA+RAL G + +I DVT
Sbjct: 61 SRKGTPFAAQQAAMTAANKANETGLRVVEVRVSGPGSGRESAVRALSTAGIEVRAIKDVT 120
Query: 115 MIAHNGCRPRKRRRI 129
I HNGCRP K+RR+
Sbjct: 121 PIPHNGCRPPKKRRV 135
>gi|254302864|ref|ZP_04970222.1| ribosomal protein S11 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323056|gb|EDK88306.1| ribosomal protein S11 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 129
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 83/129 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ KNI +G AH+ STFNNT +TITD G I+W S F G++K +P
Sbjct: 1 MAKKTVAKIKKKNKNIPNGVAHIHSTFNNTIVTITDVDGKVISWKSGGTSNFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +EVKV G G+GR++ +R+L+A G + I DVT + HNG
Sbjct: 61 FAAQIAAEQAAQIAMENGMRKVEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|303233106|ref|ZP_07319779.1| 30S ribosomal protein S11 [Atopobium vaginae PB189-T1-4]
gi|302480691|gb|EFL43778.1| 30S ribosomal protein S11 [Atopobium vaginae PB189-T1-4]
Length = 132
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
MPK R R ERKNI G+AH+ +TFNNT I+ITDP GN IAW + GF GSRK
Sbjct: 1 MPKKNQRTQHIRRSERKNIAVGQAHIKTTFNNTTISITDPQGNVIAWQTGGTAGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++PFAAQ+A + C+ A HG+ + V V G G+GR++A+R+L+A G + I D T +
Sbjct: 61 STPFAAQIAAEACAKAAMEHGLRKVAVFVKGPGSGRETAVRSLQAAGLEVSGIQDKTPVP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPCKRRRV 132
>gi|290487500|gb|ADD30134.1| ribosomal protein S11 [Ximenia americana]
Length = 138
Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K RI + + I +G HV ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKPIPRIGSRRNGRIGLRKSARRIPTGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+RK +PFAAQ T + N G+ EV + G G GRD+ALR +R + +
Sbjct: 61 FRGTRKGTPFAAQTTTGNAIRTVMNQGLQQAEVVIKGPGLGRDAALRTIRRSSILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|296272960|ref|YP_003655591.1| 30S ribosomal protein S11 [Arcobacter nitrofigilis DSM 7299]
gi|296097134|gb|ADG93084.1| 30S ribosomal protein S11 [Arcobacter nitrofigilis DSM 7299]
Length = 130
Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G H+ ++FNNT +TITD GN IAWSS +GF GS+K++P
Sbjct: 1 MAKRKVTRKKVVKKNIADGIVHIAASFNNTMVTITDRAGNAIAWSSAGNLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
FAAQ A +D AKA HG+ ++ +K+ G G+GRD+A++A+ A+ G + + DVT + HN
Sbjct: 61 FAAQAAVEDAMAKAIEHGVKNVGIKIQGPGSGRDTAVKAVGAMEGIRVSWLKDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRAPKRRRV 130
>gi|254456107|ref|ZP_05069536.1| ribosomal protein S11 [Candidatus Pelagibacter sp. HTCC7211]
gi|207083109|gb|EDZ60535.1| ribosomal protein S11 [Candidatus Pelagibacter sp. HTCC7211]
Length = 149
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+G A+V STFNNT I+I D +GN I+W+S GF GSRK++P+AAQ+A D ++KA +
Sbjct: 38 NGIAYVQSTFNNTIISIADTNGNVISWASAGQKGFKGSRKSTPYAAQIAADSAASKALEY 97
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM +L V+V G G+GR++ALRAL+A GF I+SI D T + HNG RP K+RR+
Sbjct: 98 GMKTLSVEVKGPGSGRETALRALQARGFKILSIKDTTPMPHNGTRPPKKRRV 149
>gi|12264|emb|CAA27213.1| unnamed protein product [Spinacia oleracea]
Length = 138
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K +I + + I G HV ++FNNT +T+TD G ++W+S G
Sbjct: 1 MAKPIPKIGSRRNGRISSRKSARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+++ +PFAAQ A + GM EV + G GRD+ALRA+R G + +
Sbjct: 61 FRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPSLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
+VT + HNGCRP K+RR+
Sbjct: 121 NVTPMPHNGCRPPKKRRV 138
>gi|229815745|ref|ZP_04446070.1| hypothetical protein COLINT_02794 [Collinsella intestinalis DSM
13280]
gi|229808661|gb|EEP44438.1| hypothetical protein COLINT_02794 [Collinsella intestinalis DSM
13280]
Length = 135
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 69/126 (54%), Positives = 92/126 (73%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ +RI+ +RKNI G+AH+ STFNNT ++ITDP GN IAW S VGF GSRK++PFAA
Sbjct: 10 AATRIKRADRKNISVGQAHIRSTFNNTIVSITDPAGNVIAWQSAGTVGFKGSRKSTPFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + C+ A HGM + V V G G+GR++A+R+L+A G + SI D T I HNGCRP
Sbjct: 70 QMAAEACAKAAMEHGMHKVAVFVKGPGSGRETAIRSLQAAGLEVASIQDKTPIPHNGCRP 129
Query: 124 RKRRRI 129
+KRRR+
Sbjct: 130 KKRRRV 135
>gi|85057776|ref|YP_456692.1| 30S ribosomal protein S11 [Aster yellows witches'-broom phytoplasma
AYWB]
gi|123738897|sp|Q2NIY0|RS11_AYWBP RecName: Full=30S ribosomal protein S11
gi|84789881|gb|ABC65613.1| SSU ribosomal protein S11P [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 128
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 56/113 (49%), Positives = 78/113 (69%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AH+ +TFNNT +TITD +GN + WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 15 VPLGIAHIHTTFNNTIVTITDLNGNAVTWSSAGALGFKGSRKSTPFAAQLAAEAVAKAAM 74
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
HGM +E ++G G GR++A+R+L+A G I +I DVT + HNGCRP K R
Sbjct: 75 EHGMVKVETFITGPGPGREAAIRSLQAAGLEITAIKDVTAVPHNGCRPPKPPR 127
>gi|255324777|ref|ZP_05365891.1| 30S ribosomal protein S11 [Corynebacterium tuberculostearicum
SK141]
gi|311740032|ref|ZP_07713866.1| 30S ribosomal protein S11 [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298252|gb|EET77555.1| 30S ribosomal protein S11 [Corynebacterium tuberculostearicum
SK141]
gi|311305105|gb|EFQ81174.1| 30S ribosomal protein S11 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 134
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 59/118 (50%), Positives = 85/118 (72%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ G A++ STFNNT ++ITD G I+W+S VGF GSRK++PFAAQ+A ++ +
Sbjct: 17 VKKNVALGHAYIKSTFNNTIVSITDQTGAVISWASSGHVGFKGSRKSTPFAAQMAAENAA 76
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA +HGM ++V V G G+GR++A+R+L+A G + SI D T HNGCRP KRR++
Sbjct: 77 RKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSITDATPQPHNGCRPTKRRKV 134
>gi|227502697|ref|ZP_03932746.1| ribosomal protein S11 [Corynebacterium accolens ATCC 49725]
gi|306835268|ref|ZP_07468300.1| 30S ribosomal protein S11 [Corynebacterium accolens ATCC 49726]
gi|227076427|gb|EEI14390.1| ribosomal protein S11 [Corynebacterium accolens ATCC 49725]
gi|304568861|gb|EFM44394.1| 30S ribosomal protein S11 [Corynebacterium accolens ATCC 49726]
Length = 134
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 59/118 (50%), Positives = 84/118 (71%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ G A++ STFNNT ++ITD G I+W+S VGF GSRK++PFAAQ+A + +
Sbjct: 17 VKKNVALGHAYIKSTFNNTIVSITDQTGAVISWASSGHVGFKGSRKSTPFAAQMAAESAA 76
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA +HGM ++V V G G+GR++A+R+L+A G + SI D T HNGCRP KRR++
Sbjct: 77 RKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSITDATPQPHNGCRPTKRRKV 134
>gi|197294605|ref|YP_001799146.1| 30S ribosomal protein S11 [Candidatus Phytoplasma australiense]
gi|226708396|sp|B1VAC2|RS11_PHYAS RecName: Full=30S ribosomal protein S11
gi|171853932|emb|CAM11895.1| 30S ribosomal protein S11 [Candidatus Phytoplasma australiense]
Length = 128
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 59/114 (51%), Positives = 81/114 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G AH+ +TFNNT +TITD +GN I WSS +GF GSRK++PFAAQ+A + + A
Sbjct: 14 NVPFGIAHIHTTFNNTIVTITDANGNAITWSSAGALGFKGSRKSTPFAAQLAAEAVAKAA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
HGM+ +EV ++G G GR++A+R+L+A G I +I DVT + HNGCRP K R
Sbjct: 74 MEHGMAKIEVFIAGPGPGREAAVRSLQAAGLEITAIKDVTAVPHNGCRPPKSPR 127
>gi|293977952|ref|YP_003543382.1| 30S ribosomal protein S11P [Candidatus Sulcia muelleri DMIN]
gi|292667883|gb|ADE35518.1| SSU ribosomal protein S11P [Candidatus Sulcia muelleri DMIN]
Length = 130
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + + + R N G AH+ ST+NN IT+T+ G+ IAWSS +GF GS+KN+
Sbjct: 1 MEKTFTFRKKKSRNYNYNIGEAHIKSTYNNIIITLTNKKGDVIAWSSAGKMGFKGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+ +D + K N G+ LEV V G GAGRD+A+RAL ++ I D+T I HN
Sbjct: 61 PYAAQITAEDVAEKGLNAGIKKLEVIVKGPGAGRDAAIRALVNKNLILLVIKDITPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPPKKRRI 130
>gi|301168433|emb|CBW28023.1| 30S ribosomal protein S11 [Bacteriovorax marinus SJ]
Length = 128
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G H+ +FNNT +T TDP+G IAW+S +GF GS+K++PFAAQVA+ D + KA
Sbjct: 14 NIPHGICHIQCSFNNTIVTFTDPNGGAIAWASAGQLGFRGSKKSTPFAAQVASADAAKKA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+SS++V+V G GAGR++A+RAL +G I S+ D + I HNGCR KRRR+
Sbjct: 74 MEHGLSSVDVRVKGPGAGRENAIRALIGVGLRITSVADKSPIPHNGCRAPKRRRV 128
>gi|76789245|ref|YP_328331.1| 30S ribosomal protein S11 [Chlamydia trachomatis A/HAR-13]
gi|91207737|sp|Q3KLI9|RS11_CHLTA RecName: Full=30S ribosomal protein S11
gi|76167775|gb|AAX50783.1| SSU ribosomal protein S11P [Chlamydia trachomatis A/HAR-13]
Length = 132
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT +TITDP GN I+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQVKNIPSGIVHVKATFNNTIVTITDPAGNVISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A + G+ +EV + G GAGR+SA+RAL + G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKAAMSSGLKEVEVGLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|971161|gb|AAA74988.1| ribosomal protein S11 [Chlamydia trachomatis]
Length = 132
Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats.
Identities = 64/126 (50%), Positives = 85/126 (67%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT +TITDP GN I+W+S VG+ GSRK+S FAA
Sbjct: 7 QKRGVKRKQVKNIPSGVVHVKATFNNTIVTITDPAGNVISWASAGKVGYPGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A + G+ +EV + G GAGR+SA+RAL + G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKAAMSSGLKEVEVGLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|15605237|ref|NP_220023.1| 30S ribosomal protein S11 [Chlamydia trachomatis D/UW-3/CX]
gi|237802937|ref|YP_002888131.1| 30S ribosomal protein S11 [Chlamydia trachomatis B/Jali20/OT]
gi|237804859|ref|YP_002889013.1| 30S ribosomal protein S11 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311326|ref|ZP_05353896.1| 30S ribosomal protein S11 [Chlamydia trachomatis 6276]
gi|255317627|ref|ZP_05358873.1| 30S ribosomal protein S11 [Chlamydia trachomatis 6276s]
gi|255348885|ref|ZP_05380892.1| 30S ribosomal protein S11 [Chlamydia trachomatis 70]
gi|255503425|ref|ZP_05381815.1| 30S ribosomal protein S11 [Chlamydia trachomatis 70s]
gi|255507103|ref|ZP_05382742.1| 30S ribosomal protein S11 [Chlamydia trachomatis D(s)2923]
gi|290463295|sp|P0CE03|RS11_CHLTR RecName: Full=30S ribosomal protein S11
gi|3328945|gb|AAC68109.1| S11 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|231273159|emb|CAX10072.1| SSU ribosomal protein S11P [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274171|emb|CAX10965.1| SSU ribosomal protein S11P [Chlamydia trachomatis B/Jali20/OT]
gi|289525553|emb|CBJ15031.1| SSU ribosomal protein S11P [Chlamydia trachomatis Sweden2]
gi|296435113|gb|ADH17291.1| 30S ribosomal protein S11 [Chlamydia trachomatis E/150]
gi|296436041|gb|ADH18215.1| 30S ribosomal protein S11 [Chlamydia trachomatis G/9768]
gi|296436969|gb|ADH19139.1| 30S ribosomal protein S11 [Chlamydia trachomatis G/11222]
gi|296437902|gb|ADH20063.1| 30S ribosomal protein S11 [Chlamydia trachomatis G/11074]
gi|296438833|gb|ADH20986.1| 30S ribosomal protein S11 [Chlamydia trachomatis E/11023]
gi|297140402|gb|ADH97160.1| 30S ribosomal protein S11 [Chlamydia trachomatis G/9301]
gi|297748638|gb|ADI51184.1| SSU ribosomal protein S11P [Chlamydia trachomatis D-EC]
gi|297749518|gb|ADI52196.1| SSU ribosomal protein S11P [Chlamydia trachomatis D-LC]
Length = 132
Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT +TITDP GN I+W+S VG+SGSRK+S FAA
Sbjct: 7 QKKGVKRKQVKNIPSGVVHVKATFNNTIVTITDPAGNVISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A + G+ +EV + G GAGR+SA+RAL + G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKAAMSSGLKEVEVGLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|32363478|sp|Q9BBN1|RR11_MARQU RecName: Full=30S ribosomal protein S11, chloroplastic
Length = 130
Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R + ++ + G H+ + FNNT IT+TD G I WSS GF G+R+++
Sbjct: 1 MSKISRKSRLRKGKRGVQKGIIHIQAGFNNTIITVTDVRGQVILWSSAGACGFKGTRRST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + G+ EV +SG G GRD+ALRA+R G T+ + DVT + HN
Sbjct: 61 PFAAQAAAENAVRASMDRGLKQAEVMISGPGPGRDTALRAIRRSGVTLSFVRDVTPMPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|189485110|ref|YP_001956051.1| 30S ribosomal protein S11 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|254811055|sp|B1GZA8|RS11_UNCTG RecName: Full=30S ribosomal protein S11
gi|170287069|dbj|BAG13590.1| 30S ribosomal protein S11 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 131
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRA--HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + + + ++K G A +++STFNNT + ITD GNT+AW+S V GF G++K
Sbjct: 1 MAGEKNAVGSSKKKKYTGGVAKAYILSTFNNTIVNITDEKGNTLAWASAGVSGFKGTKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ+ K G+ + + + G G GR++A+R L++ G I +I D+T + H
Sbjct: 61 TPFAAQMTAASVGRKVMGIGVKQIAIFIKGPGPGRETAIRGLQSSGLGITTIKDITPVPH 120
Query: 119 NGCRPRKRRRI 129
+GCRP K RR+
Sbjct: 121 DGCRPPKLRRV 131
>gi|229915456|gb|ACQ90801.1| ribosomal protein S11 [Oocystis solitaria]
Length = 130
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVS-GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + ++ K V G + ++FNNT ITIT+ G+ I+WSS GF G+RK +
Sbjct: 1 MARQIRKASPKKVKKKVPKGIVQIQASFNNTIITITNFKGDVISWSSAGACGFKGARKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAA+ A + + ++ + GM ++V V G GAGR+ ALR L+ G I I D+T I HN
Sbjct: 61 PFAAKTAAEMAAKQSVDQGMKEVKVMVKGPGAGREPALRGLQEAGLLITLIRDITPIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RRI
Sbjct: 121 GCRPPKKRRI 130
>gi|227832271|ref|YP_002833978.1| 30S ribosomal protein S11 [Corynebacterium aurimucosum ATCC 700975]
gi|262183873|ref|ZP_06043294.1| 30S ribosomal protein S11 [Corynebacterium aurimucosum ATCC 700975]
gi|254765377|sp|C3PL36|RS11_CORA7 RecName: Full=30S ribosomal protein S11
gi|227453287|gb|ACP32040.1| 30S ribosomal protein S11 [Corynebacterium aurimucosum ATCC 700975]
Length = 134
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 88/118 (74%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ +G A++ STFNNT ++ITDPHG I+W+S VGF GSRK++PFAAQ+A ++ +
Sbjct: 17 VKKNVAAGHAYIKSTFNNTIVSITDPHGAVISWASSGHVGFKGSRKSTPFAAQMAAENAA 76
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
KA +HGM ++V V G G+GR++A+R+L+A G + SI D T HNGCRP KRR++
Sbjct: 77 RKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSITDATPQPHNGCRPTKRRKV 134
>gi|166154723|ref|YP_001654841.1| 30S ribosomal protein S11 [Chlamydia trachomatis 434/Bu]
gi|166155598|ref|YP_001653853.1| 30S ribosomal protein S11 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335997|ref|ZP_07224241.1| 30S ribosomal protein S11 [Chlamydia trachomatis L2tet1]
gi|226708345|sp|B0B882|RS11_CHLT2 RecName: Full=30S ribosomal protein S11
gi|226708347|sp|B0BCE7|RS11_CHLTB RecName: Full=30S ribosomal protein S11
gi|165930711|emb|CAP04208.1| SSU ribosomal protein S11P [Chlamydia trachomatis 434/Bu]
gi|165931586|emb|CAP07162.1| SSU ribosomal protein S11P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 132
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 86/126 (68%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
++ ++ KNI SG HV +TFNNT +TITDP GN I+W+S VG+SGSRK+S FAA
Sbjct: 7 QKRGVKRKQVKNIPSGVVHVKATFNNTIVTITDPAGNVISWASAGKVGYSGSRKSSAFAA 66
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
VA D + A + G+ +EV + G GAGR+SA+RAL + G + I D T + HNGCRP
Sbjct: 67 TVAAQDAAKAAMSSGLKEVEVGLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGCRP 126
Query: 124 RKRRRI 129
RKRRR+
Sbjct: 127 RKRRRV 132
>gi|146278545|ref|YP_001168704.1| 30S ribosomal protein S11 [Rhodobacter sphaeroides ATCC 17025]
gi|166231826|sp|A4WVI5|RS11_RHOS5 RecName: Full=30S ribosomal protein S11
gi|145556786|gb|ABP71399.1| SSU ribosomal protein S11P [Rhodobacter sphaeroides ATCC 17025]
Length = 129
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 99/129 (76%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRMKRKERKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KAQ HGM ++EV+V G G+GR+SALRAL A G I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAAKKAQEHGMKTIEVEVQGPGSGRESALRALAAAGLNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|302336355|ref|YP_003801562.1| SSU ribosomal protein S11P [Olsenella uli DSM 7084]
gi|301320195|gb|ADK68682.1| SSU ribosomal protein S11P [Olsenella uli DSM 7084]
Length = 133
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 72/132 (54%), Positives = 93/132 (70%), Gaps = 4/132 (3%)
Query: 1 MPKSPSR----IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
MP+ ++ +R ERKNI G+AH+ STFNNT I+ITDP GN IAW S VGF GSR
Sbjct: 1 MPQKKNQRTQHVRRAERKNIAVGQAHIKSTFNNTIISITDPQGNVIAWQSGGTVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + C+ A HG+ + V V G G+GR++A+R+L+A G + I D T I
Sbjct: 61 KSTPFAAQVAAEACAKAAMEHGLHKVVVFVKGPGSGRETAVRSLQAAGLEVSGIQDKTPI 120
Query: 117 AHNGCRPRKRRR 128
AHNGCRP+KRRR
Sbjct: 121 AHNGCRPKKRRR 132
>gi|291514966|emb|CBK64176.1| SSU ribosomal protein S11P [Alistipes shahii WAL 8301]
Length = 129
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 81/129 (62%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K ++ + K G +V STFNN ITIT+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKKTGTVKKKVVKVGALGNVYVHSTFNNVIITITNEVGDVISWSSAGKMGFRGSKKNTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A+ DC+ A + G+ ++V V G GAGR+SA+R + G ++ I DVT + HNG
Sbjct: 61 YAAQTASADCAKVAYDMGLRKVKVYVKGPGAGRESAVRTIHGAGIEVMEIIDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CR RRR+
Sbjct: 121 CRAPNRRRV 129
>gi|315639081|ref|ZP_07894249.1| 30S ribosomal protein S11 [Campylobacter upsaliensis JV21]
gi|315480857|gb|EFU71493.1| 30S ribosomal protein S11 [Campylobacter upsaliensis JV21]
Length = 130
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G ++ +TFNNT +T+TD GN IAW+S +GF GS+K++P+AAQ A + KA+ HG
Sbjct: 19 GIVYISATFNNTMVTVTDEMGNAIAWASAGGLGFKGSKKSTPYAAQQAVESALTKAKEHG 78
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GR++A++++ A+ G ++ + D+T +AHNGCRP KRRR+
Sbjct: 79 IKEVGIKVQGPGSGRETAVKSVGAMEGIKVLFLKDITPLAHNGCRPPKRRRV 130
>gi|77462282|ref|YP_351786.1| 30S ribosomal protein S11 [Rhodobacter sphaeroides 2.4.1]
gi|126461158|ref|YP_001042272.1| 30S ribosomal protein S11 [Rhodobacter sphaeroides ATCC 17029]
gi|221638136|ref|YP_002524398.1| 30S ribosomal protein S11 [Rhodobacter sphaeroides KD131]
gi|91207676|sp|Q3J5P9|RS11_RHOS4 RecName: Full=30S ribosomal protein S11
gi|152060815|sp|A3PGN4|RS11_RHOS1 RecName: Full=30S ribosomal protein S11
gi|254811040|sp|B9KLB4|RS11_RHOSK RecName: Full=30S ribosomal protein S11
gi|77386700|gb|ABA77885.1| SSU ribosomal protein S11P [Rhodobacter sphaeroides 2.4.1]
gi|126102822|gb|ABN75500.1| SSU ribosomal protein S11P [Rhodobacter sphaeroides ATCC 17029]
gi|221158917|gb|ACL99896.1| 30S ribosomal protein S11 [Rhodobacter sphaeroides KD131]
Length = 129
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 100/129 (77%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R++ +ERKNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSRK++P
Sbjct: 1 MARDKTRMKRKERKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + KAQ+HGM ++EV+V G G+GR+SALRAL A G I SI DVT +AHNG
Sbjct: 61 YAAQMAAEDAAKKAQDHGMKTIEVEVQGPGSGRESALRALAAAGLNITSIRDVTPMAHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 121 CRPPKRRRV 129
>gi|257784937|ref|YP_003180154.1| 30S ribosomal protein S11 [Atopobium parvulum DSM 20469]
gi|257473444|gb|ACV51563.1| ribosomal protein S11 [Atopobium parvulum DSM 20469]
Length = 133
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 1 MPKSP----SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M + +R+R ERKNI G+AH+ STFNNT ++I+DP GN I+W S VGF GSR
Sbjct: 1 MAQKKNARTTRVRRSERKNIAVGQAHIKSTFNNTIVSISDPQGNVISWQSGGTVGFKGSR 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQ+A + + A HG+ + V V G G+GR++A+R+L+A G + I D T I
Sbjct: 61 KSTPFAAQLAAEAAAKAAMEHGLHKVAVFVKGPGSGRETAIRSLQAAGLEVSGIQDKTPI 120
Query: 117 AHNGCRPRKRRR 128
AHNGCRP+KRRR
Sbjct: 121 AHNGCRPKKRRR 132
>gi|262277116|ref|ZP_06054909.1| 30S ribosomal protein S11 [alpha proteobacterium HIMB114]
gi|262224219|gb|EEY74678.1| 30S ribosomal protein S11 [alpha proteobacterium HIMB114]
Length = 135
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 88/114 (77%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ SG+A V +TFNNT I+ITD GN ++WSS GF GSRK++P+AAQVA DD +AKA
Sbjct: 22 VTSGKAFVYATFNNTIISITDKSGNVLSWSSAGSKGFKGSRKSTPYAAQVAADDAAAKAS 81
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +L+V+V G G+GR++ALRAL+A GF IVSI D + I HNGCRP K+RR+
Sbjct: 82 EYGLKTLDVEVKGPGSGRETALRALQARGFKIVSIKDTSPIPHNGCRPPKKRRV 135
>gi|183217773|ref|YP_001837393.1| ribosomal protein S11 [Guizotia abyssinica]
gi|281190749|ref|YP_003330986.1| ribosomal protein S11 [Parthenium argentatum]
gi|224493277|sp|B2LMM6|RR11_GUIAB RecName: Full=30S ribosomal protein S11, chloroplastic
gi|179366288|gb|ACB86559.1| ribosomal protein S11 [Guizotia abyssinica]
gi|269924862|gb|ACZ52735.1| ribosomal protein S11 [Parthenium argentatum]
Length = 136
Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 2 PKSPSRIR---NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
PK SR R + + I G H+ ++FNNT +T+TD G ++WSS GF G+R+
Sbjct: 6 PKKGSRGRIGSRKSIRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRG 65
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+PFAAQ A + + GM EV + G G GRD+ALRA+R G + + DVT + H
Sbjct: 66 TPFAAQTAAANAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPH 125
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 126 NGCRPPKKRRV 136
>gi|78776526|ref|YP_392841.1| 30S ribosomal protein S11 [Sulfurimonas denitrificans DSM 1251]
gi|91207686|sp|Q30TS5|RS11_SULDN RecName: Full=30S ribosomal protein S11
gi|78497066|gb|ABB43606.1| SSU ribosomal protein S11P [Sulfurimonas denitrificans DSM 1251]
Length = 130
Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats.
Identities = 60/116 (51%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G H+ ++FNNT +TITD GN IAWSS +GF GS+K++PFAAQ A +D AKA
Sbjct: 15 NIARGICHISASFNNTLVTITDEMGNMIAWSSAGSLGFKGSKKSTPFAAQAAVEDAVAKA 74
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HG+ L +KV G G+GR++A +A+ I G + + DVT + HNGCR KRRR+
Sbjct: 75 QVHGVKELGIKVQGPGSGRETATKAVGGIEGIRVTFMKDVTPLPHNGCRAPKRRRV 130
>gi|94502226|ref|ZP_01308712.1| ribosomal protein S11 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833840|ref|YP_001598036.1| 30S ribosomal subunit protein S11 [Candidatus Sulcia muelleri GWSS]
gi|172048399|sp|A8Z689|RS11_SULMW RecName: Full=30S ribosomal protein S11
gi|94451197|gb|EAT14136.1| ribosomal protein S11 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206330|gb|ABS30640.1| 30S ribosomal subunit protein S11 [Candidatus Sulcia muelleri GWSS]
Length = 128
Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 81/121 (66%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R + +N G AH+ ST+NN IT+T+ G+ IAWSS +GF GS+KN+P+AAQ+ +
Sbjct: 8 RKKNSRNYNIGEAHIKSTYNNIIITLTNKKGDVIAWSSAGKMGFKGSKKNTPYAAQITAE 67
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
D + K N G+ L+V V G GAGRD+A+RAL ++ I D+T I HNGCRP K+RR
Sbjct: 68 DVAEKGLNAGIKKLKVIVKGPGAGRDAAIRALVNKNLILLVIKDITPIPHNGCRPPKKRR 127
Query: 129 I 129
I
Sbjct: 128 I 128
>gi|284042829|ref|YP_003393169.1| 30S ribosomal protein S11 [Conexibacter woesei DSM 14684]
gi|283947050|gb|ADB49794.1| 30S ribosomal protein S11 [Conexibacter woesei DSM 14684]
Length = 132
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/128 (53%), Positives = 89/128 (69%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
PK P R R R RKNI G+AH+ ++FNNT +++TD GN IAW S GF GSRK++PF
Sbjct: 5 PKRPQRGRRRVRKNIPVGQAHIKTSFNNTIVSLTDREGNVIAWESAGGAGFKGSRKSTPF 64
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQV D + K HG+ +EV V G G+GR++A+R+L+A G + + DVT AHNGC
Sbjct: 65 AAQVTADAAARKGIEHGLQKVEVFVKGPGSGRETAIRSLQAAGLEVTGVKDVTPQAHNGC 124
Query: 122 RPRKRRRI 129
RPRKRRR+
Sbjct: 125 RPRKRRRV 132
>gi|159106825|ref|YP_001531245.1| ribosomal protein S11 [Cuscuta obtusiflora]
gi|172048144|sp|A8W3L5|RR11_CUSOB RecName: Full=Plastid 30S ribosomal protein S11
gi|158142549|gb|ABW20590.1| ribosomal protein S11 [Cuscuta obtusiflora]
Length = 138
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 2 PKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+ RIR + + I G H+ ++ NT +T+TD G ++W+S GF G+ + +P
Sbjct: 10 SRRNGRIRLRKNKHKIPQGVIHIQASLQNTIVTVTDVRGRVVSWASAGSAGFKGTTRRTP 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + A N GM +V + G G GRD+ALRA+R G + I DVT + HNG
Sbjct: 70 FAAQTAATNAIHTAINQGMREADVLIKGPGLGRDAALRAIRRSGIRLELILDVTPMPHNG 129
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 130 CRPPKKRRV 138
>gi|149072029|ref|YP_001293600.1| ribosomal protein S11 [Rhodomonas salina]
gi|172048720|sp|A6MW21|RR11_RHDSA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|134302980|gb|ABO70784.1| ribosomal protein S11 [Rhodomonas salina]
Length = 129
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 61/129 (47%), Positives = 88/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R N+++K +G AH+ STFNNT +TIT G T++W+S +GF G++K +P
Sbjct: 1 MARQIKRAANKKKKTAPTGVAHIQSTFNNTIVTITTVTGETVSWASSGAIGFKGAKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + S +A + GM EV V+G GAGR++A+RAL+A G I I D+T + HNG
Sbjct: 61 FAAQIAAEKASKEAMSQGMKKAEVLVNGPGAGRETAVRALQAAGLEITLIRDITPVPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129
>gi|12659011|gb|AAK01151.1|AF311314_1 PRS11 [Marsilea quadrifolia]
Length = 136
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R + ++ + G H+ + FNNT IT+TD G I WSS GF G+R+++
Sbjct: 7 MSKISRKSRLRKGKRGVQKGIIHIQAGFNNTIITVTDVRGQVILWSSAGACGFKGTRRST 66
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + G+ EV +SG G GRD+ALRA+R G T+ + DVT + HN
Sbjct: 67 PFAAQAAAENAVRASMDRGLKQAEVMISGPGPGRDTALRAIRRSGVTLSFVRDVTPMPHN 126
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 127 GCRPPKKRRV 136
>gi|256420684|ref|YP_003121337.1| ribosomal protein S11 [Chitinophaga pinensis DSM 2588]
gi|256035592|gb|ACU59136.1| ribosomal protein S11 [Chitinophaga pinensis DSM 2588]
Length = 133
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MPKSPSRIRNRERKNIVS----GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+ + +K +V G H+ ++FNN I+IT+ G I+WS+ +GF GS+
Sbjct: 1 MAKAQNTKTAANKKRVVKVDNYGDVHISASFNNIIISITNKQGQVISWSTAGKMGFKGSK 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
KN+P+AAQ+A D + A G+ +V V G GAGR+SA+RA+ G + I DVT +
Sbjct: 61 KNTPYAAQLAASDAAKTAMEAGLKRADVFVKGPGAGRESAIRAIANSGIEVNMIKDVTPL 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 PHNGCRPPKKRRV 133
>gi|109946781|ref|YP_664009.1| 30S ribosomal protein S11 [Helicobacter acinonychis str. Sheeba]
gi|122973446|sp|Q17ZB6|RS11_HELAH RecName: Full=30S ribosomal protein S11
gi|109714002|emb|CAJ99010.1| 30S ribosomal protein S11 [Helicobacter acinonychis str. Sheeba]
Length = 131
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MPKSP-SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + + +KNI G ++ +TFNNT ITITD GN I WS+ +GF GS+K++
Sbjct: 1 MAKRNVATKKKVVKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSKKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAH 118
P+AAQ A + +KA+ HG+ + +KV G G+GR++A++++ A G ++ I D+T ++H
Sbjct: 61 PYAAQQAVESALSKAKEHGVKEVGIKVQGSGSGRETAIKSVGATEGVKVLWIKDITPLSH 120
Query: 119 NGCRPRKRRRI 129
NGCRP KRRR+
Sbjct: 121 NGCRPPKRRRV 131
>gi|256825860|ref|YP_003149820.1| 30S ribosomal protein S11P [Kytococcus sedentarius DSM 20547]
gi|256689253|gb|ACV07055.1| SSU ribosomal protein S11P [Kytococcus sedentarius DSM 20547]
Length = 133
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/117 (53%), Positives = 84/117 (71%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+KN+ +G AH+ STFNNT I+ITDP G IAW+S VGF GSRK++P+AAQ+A + +
Sbjct: 16 VKKNVAAGHAHIRSTFNNTIISITDPSGAVIAWASAGQVGFKGSRKSTPYAAQMAAEAAA 75
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+A HGM ++V V G G GR++A+R+L A G + SI DVT +AHNG RP KRRR
Sbjct: 76 RRAMEHGMKKVDVFVKGPGPGRETAIRSLTATGLEVGSISDVTPVAHNGVRPPKRRR 132
>gi|255961330|ref|YP_003097512.1| ribosomal protein S11 [Selaginella moellendorffii]
gi|302824559|ref|XP_002993922.1| hypothetical protein SELMODRAFT_137780 [Selaginella moellendorffii]
gi|254941502|gb|ACT89017.1| ribosomal protein S11 [Selaginella moellendorffii]
gi|296399214|gb|ADH10389.1| ribosomal protein S11 [Selaginella moellendorffii]
gi|300138289|gb|EFJ05063.1| hypothetical protein SELMODRAFT_137780 [Selaginella moellendorffii]
Length = 129
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 74/129 (57%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +R +R+ I G H ++FNNT +T D G ++W S GF G+RK++
Sbjct: 1 MMRKIGGLRGSKRRRISKGVTHTRASFNNTIVTAADARGQVVSWFSAGACGFGGARKSTA 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A ++ + G+ EV ++G G GRD+ALRA+ G + + D+T + HNG
Sbjct: 61 FAAQTAAENAIRTLIDQGVKRAEVVITGPGPGRDTALRAICGSGVVLGLVRDITPMPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRR I
Sbjct: 121 CRPPKRRCI 129
>gi|91200692|emb|CAJ73743.1| strongly similar to 30S ribosomal protein S11 [Candidatus Kuenenia
stuttgartiensis]
Length = 125
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 58/124 (46%), Positives = 86/124 (69%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
S+ + R+N+ A++ +TFNNT +TI D +G TI W+S G+ GSRK++PFAAQ
Sbjct: 2 SKTSKKIRRNVTRAIANIKATFNNTYVTIADVNGETICWASAGTAGYKGSRKSTPFAAQK 61
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + KAQ +G+ +E++V G G GR+SA+ AL+A G ++ +I DVT + HNGCRPRK
Sbjct: 62 AATSAAEKAQKYGIQEIEIRVKGPGPGRESAITALQAAGLSVKAIEDVTPLPHNGCRPRK 121
Query: 126 RRRI 129
+RR+
Sbjct: 122 KRRV 125
>gi|156618935|ref|YP_001430070.1| ribosomal protein S11 [Cuscuta gronovii]
gi|171769774|sp|A7M929|RR11_CUSGR RecName: Full=Plastid 30S ribosomal protein S11
gi|156555973|emb|CAM98357.1| ribosomal protein S11 [Cuscuta gronovii]
Length = 138
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 2 PKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+ RIR + + I G H+ ++ NT +T+TD G ++W+S GF G+ + +P
Sbjct: 10 SRRNGRIRLRKNTRKISQGVIHIQASLQNTIVTVTDVRGRVVSWASAGSAGFKGTTRRTP 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ A + A NHGM +V + G G GRD+ALRA+R G + I DVT + HNG
Sbjct: 70 FAAQTAATNAIRTAINHGMREADVLIKGPGLGRDAALRAIRRSGIRLELILDVTPMPHNG 129
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 130 CRPPKKRRV 138
>gi|295311759|ref|YP_003587498.1| ribosomal protein S11 [Oncidium Gower Ramsey]
gi|254833136|gb|ACT83139.1| ribosomal protein S11 [Oncidium Gower Ramsey]
Length = 138
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +T+TD G ++W+S GF G+RK +P+A
Sbjct: 12 KNARIGSKKNERRIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFRGTRKGTPYA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALR+LR G + + DVT + HNGCR
Sbjct: 72 AQAAAFNAIRTLVDQGMQRAEVMIKGPGLGRDAALRSLRRNGMLLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|325294422|ref|YP_004280936.1| 30S ribosomal protein S11 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064870|gb|ADY72877.1| 30S ribosomal protein S11 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 130
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ ++ ++++ + AH+ +TFNNT IT TD GNT+ W S VGF G+RK++P
Sbjct: 1 MARARRNVKKKQKRTVGFAIAHIQTTFNNTIITFTDKEGNTLVWESGGTVGFKGTRKSTP 60
Query: 61 FAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQ+A + +A +G+ +E+++ G G GR++A++A+ A+G + +I DVT I H+
Sbjct: 61 YAAQLAATKAAERAMKEYGVKDVEIRIKGNGGGRETAIKAIAAVGLNVKAIKDVTPIPHD 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|88657813|ref|YP_507249.1| 30S ribosomal protein S11 [Ehrlichia chaffeensis str. Arkansas]
gi|123763766|sp|Q2GH34|RS11_EHRCR RecName: Full=30S ribosomal protein S11
gi|88599270|gb|ABD44739.1| ribosomal protein S11 [Ehrlichia chaffeensis str. Arkansas]
Length = 126
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++++N+V G ++ +T+NN +T+TD G+++ +S GF GS+K +P+AAQ
Sbjct: 6 KKKKRNVVVGVVYIHATYNNIIVTVTDQQGHSLICTSAGACGFKGSKKATPYAAQETASH 65
Query: 70 CSAKAQNH-GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
GM ++ +KVSG GAGR+SA+RA++A + SI D T + HNGC+ RRR
Sbjct: 66 AVKTVVEQNGMKTVSIKVSGPGAGRESAIRAVQACNLNVTSIKDTTKLPHNGCKLPGRRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|113677273|ref|NP_001038262.1| mitochondrial ribosomal protein S11 [Danio rerio]
gi|55251027|emb|CAH69072.1| novel protein similar to mouse and human mitochondrial ribosomal
protein S11 (MRPS11) [Danio rerio]
gi|134025301|gb|AAI34988.1| Zgc:162401 protein [Danio rerio]
gi|213624752|gb|AAI71532.1| Si:dkey-265m8.2 [Danio rerio]
gi|213627536|gb|AAI71530.1| Si:dkey-265m8.2 [Danio rerio]
Length = 199
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 73/127 (57%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AHV +T+NNT I +TD G + +S GF +K++P
Sbjct: 72 PGEDSPLRWDSKKFEELPIAHVKATYNNTHIQVTDCAGQYMVRTSCGTEGFKNVKKSTPI 131
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA+ G++ + V V GLG GR SA++ L G +VSI D T + HNGC
Sbjct: 132 AAQTAGISAAAKARAKGVTYVRVLVKGLGPGRFSAIKGLTMGGLEVVSITDNTPVPHNGC 191
Query: 122 RPRKRRR 128
RPRK RR
Sbjct: 192 RPRKARR 198
>gi|301353388|ref|YP_003795613.1| ribosomal protein S11 [Pteridium aquilinum subsp. aquilinum]
gi|301016306|gb|ADK47593.1| ribosomal protein S11 [Pteridium aquilinum subsp. aquilinum]
Length = 130
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + +IR + ++ + G H+ ++FNNT IT+TD G W S GF G+RK++
Sbjct: 1 MSNNSKKIRSRKGKRGVQKGVIHIQASFNNTIITVTDVRGQVALWCSAGACGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM EV +SG G GRD+ALRA+R G + + DVT + +N
Sbjct: 61 PFAAQAAAENAIRASMDRGMKQAEVMMSGPGPGRDTALRAIRRSGIILSFVRDVTPMPYN 120
Query: 120 GCRPRKRRRI 129
GCRP ++RR+
Sbjct: 121 GCRPPRKRRV 130
>gi|269991337|emb|CAX12521.1| 30S ribosomal protein S11 [Fucus vesiculosus]
Length = 123
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ + ++ IV+G HV +TFNNT +T++D GNT+ W+S V F GSRK++PFA+Q A +
Sbjct: 2 KKKIKRTIVTGAMHVHATFNNTIVTVSDLDGNTLPWASAGTVNFKGSRKSTPFASQKAAE 61
Query: 69 DCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
S A+ + + LE+ + G G GR++A+RA+ G +VSI D T I +NGCRP KRR
Sbjct: 62 KASLAAKEEYRLKRLEIIIKGSGPGREAAIRAVYQKGIRVVSIKDSTSIPYNGCRPPKRR 121
Query: 128 RI 129
R+
Sbjct: 122 RV 123
>gi|78103282|ref|YP_358614.1| ribosomal protein S11 [Phalaenopsis aphrodite subsp. formosana]
gi|91207757|sp|Q3BAK4|RR11_PHAAO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|58802812|gb|AAW82532.1| ribosomal protein S11 [Phalaenopsis aphrodite subsp. formosana]
Length = 138
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 76/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ N+ + I G HV ++FNNT +T+TD G ++W+S GF G+RK +P+A
Sbjct: 12 KNARIGSNKNERRIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFRGTRKGTPYA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQAAAFNAIRTLVDQGMQRAEVMIKGPGLGRDAALRAIRRNGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|328951210|ref|YP_004368545.1| 30S ribosomal protein S11 [Marinithermus hydrothermalis DSM 14884]
gi|328451534|gb|AEB12435.1| 30S ribosomal protein S11 [Marinithermus hydrothermalis DSM 14884]
Length = 127
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/128 (51%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K SR + ++ + G+A++ +T+NNT +TITDP GN IAWSS V+G+ GSRK +P
Sbjct: 1 MAKRTSR--KKVKRQVAHGKAYIHATYNNTIVTITDPEGNPIAWSSGGVIGYKGSRKGTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A D + KAQ +GM+ ++V V G GAGR+ A+RAL+A G + SI D T + HNG
Sbjct: 59 YAAQLAAIDAAKKAQAYGMTQVDVIVRGTGAGREQAIRALQASGLQVRSIVDDTPVPHNG 118
Query: 121 CRPRKRRR 128
CRPRKR+R
Sbjct: 119 CRPRKRKR 126
>gi|57239314|ref|YP_180450.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Welgevonden]
gi|58579280|ref|YP_197492.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Welgevonden]
gi|58617334|ref|YP_196533.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Gardel]
gi|75356680|sp|Q5FFS0|RS11_EHRRG RecName: Full=30S ribosomal protein S11
gi|81352863|sp|Q5HAU4|RS11_EHRRW RecName: Full=30S ribosomal protein S11
gi|57161393|emb|CAH58317.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Welgevonden]
gi|58416946|emb|CAI28059.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Gardel]
gi|58417906|emb|CAI27110.1| 30S ribosomal protein S11 [Ehrlichia ruminantium str. Welgevonden]
Length = 127
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++++N+V G H+ +T+NN +TITD G+++ +S GF GS+K +P+AAQ
Sbjct: 7 KKKKRNVVVGVVHIHATYNNIIVTITDQQGHSLVSTSAGAYGFKGSKKATPYAAQETAGH 66
Query: 70 CSAKAQNH-GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
GM ++ +KVSG GAGR++A+RA++A + SI D T + HNGC+ RRR
Sbjct: 67 AVKTVVEQNGMKTVSIKVSGPGAGREAAIRAVQACNLNVTSIKDTTKLPHNGCKLPGRRR 126
Query: 129 I 129
+
Sbjct: 127 V 127
>gi|42524354|ref|NP_969734.1| 30S ribosomal protein S11 [Bdellovibrio bacteriovorus HD100]
gi|59798736|sp|Q6MJ34|RS11_BDEBA RecName: Full=30S ribosomal protein S11
gi|39576563|emb|CAE80727.1| 30S ribosomal protein S11 [Bdellovibrio bacteriovorus HD100]
Length = 130
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/116 (51%), Positives = 81/116 (69%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+N+ G ++ + F N +T+TDP G T++WSS +GF GSRK +PFAAQVA +D + K
Sbjct: 15 RNVPQGNCYIQAGFGNVIVTMTDPTGATVSWSSAGHLGFKGSRKGTPFAAQVAAEDAAKK 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A GM S++V + G GAGR+ A+RAL A G I+S+ DVT + HNGCRP KRRRI
Sbjct: 75 AMEAGMKSVDVYLKGPGAGREPAIRALAATGMRILSLKDVTPVPHNGCRPPKRRRI 130
>gi|283795000|ref|YP_003359391.1| ribosomal protein S11 [Olea europaea]
gi|330850775|ref|YP_004376453.1| ribosomal protein S11 [Olea europaea subsp. europaea]
gi|281428719|gb|ADA69958.1| ribosomal protein S11 [Olea europaea]
gi|291059285|gb|ADD72121.1| ribosomal protein S11 [Olea europaea]
gi|328795465|emb|CBR30347.1| ribosomal protein S11 [Olea europaea subsp. europaea]
Length = 138
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRIGSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|221195533|ref|ZP_03568588.1| 30S ribosomal protein S11 [Atopobium rimae ATCC 49626]
gi|221184720|gb|EEE17112.1| 30S ribosomal protein S11 [Atopobium rimae ATCC 49626]
Length = 133
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/125 (52%), Positives = 88/125 (70%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ IR ERKNI G+AH+ STFNNT ++I+DP GN I+W S VGF GSRK++PFAA
Sbjct: 8 RTTHIRRSERKNIAVGQAHIKSTFNNTIVSISDPQGNVISWQSGGTVGFKGSRKSTPFAA 67
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q+A + + A HG+ + V V G G+GR++A+R+L+A G + I D T IAHNGCRP
Sbjct: 68 QLAAEAAAKAAMEHGLHKVAVFVKGPGSGRETAIRSLQAAGLEVSGIQDKTPIAHNGCRP 127
Query: 124 RKRRR 128
+KRRR
Sbjct: 128 KKRRR 132
>gi|290790802|gb|ADD63059.1| ribosomal protein S11 [Potamophila parviflora]
gi|290790869|gb|ADD63125.1| ribosomal protein S11 [Microlaena stipoides]
Length = 143
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|38638294|ref|NP_943668.1| ribosomal protein S11 [Chara vulgaris]
gi|32966608|gb|AAP92191.1| ribosomal protein S11 [Chara vulgaris]
Length = 131
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G A++ ST +NT ITITD G+T +WSS VGF GSR+++ +AAQ ++ + A
Sbjct: 20 HGIAYIQSTLSNTIITITDSFGDTKSWSSSGSVGFKGSRRSTNYAAQATAENVARAAIPL 79
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ S+EV++ GLG G+ SALR L+ G I I DVT HNGCRP K+RR+
Sbjct: 80 GIKSVEVRIKGLGYGKPSALRGLQLGGLIITKISDVTPTPHNGCRPPKKRRV 131
>gi|122894023|ref|YP_001004219.1| ribosomal protein S11 [Ranunculus macranthus]
gi|69216836|gb|AAZ03976.1| ribosomal protein S11 [Ranunculus macranthus]
gi|85540837|gb|ABC70789.1| ribosomal protein S11 [Ranunculus macranthus]
Length = 138
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 73/119 (61%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 20 KNGRRIPKGVIHVQASFNNTIVTVTDIRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAANA 79
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 80 IRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|159161194|ref|YP_001542480.1| ribosomal protein S11 [Ceratophyllum demersum]
gi|172048125|sp|A8SED6|RR11_CERDE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|148508477|gb|ABQ81484.1| ribosomal protein S11 [Ceratophyllum demersum]
gi|227481151|emb|CAP62530.1| ribosomal protein S11 [Ceratophyllum demersum]
Length = 138
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKNGRRIPKGVIHVQASFNNTIVTVTDVRGQVVSWSSAGTCGFRGTRRGTPFAAQTAAAN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|290487520|gb|ADD30144.1| ribosomal protein S11 [Plumbago auriculata]
Length = 140
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVV--STFNNTRITITDPHGNTIAWSSPKV 49
M K +I + + IV G ++ ++FNNT +T+TD G ++W+S
Sbjct: 1 MAKRIPKIGSRRNRRINSRKSTRKIVRGVIYIYVQASFNNTIVTLTDVRGRVVSWASAGT 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
GF G ++ +PFAA+ + K + GM EV + G G GRD ALRA+R G +
Sbjct: 61 CGFKGGKRATPFAAETTARNAIRKVVDQGMQGAEVMIKGPGLGRDGALRAIRRSGILLSR 120
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
+ DVT + HNGCRP K+RR+
Sbjct: 121 VRDVTPMPHNGCRPPKKRRV 140
>gi|108759690|ref|YP_631523.1| 30S ribosomal protein S11 [Myxococcus xanthus DK 1622]
gi|122981073|sp|Q1D750|RS11_MYXXD RecName: Full=30S ribosomal protein S11
gi|108463570|gb|ABF88755.1| ribosomal protein S11 [Myxococcus xanthus DK 1622]
Length = 146
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/115 (60%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI++G H+ STFNNT ITITD GN I+WSS GF GSRK++PFAAQVA D +AKA
Sbjct: 32 NILNGVVHIQSTFNNTIITITDVSGNVISWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 91
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCR KRRR+
Sbjct: 92 MEHGLKNVSVFVKGPGAGRESALRALAAAGLKINLIRDVTPIPHNGCRQPKRRRV 146
>gi|295136920|ref|YP_003587753.1| ribosomal protein S11 [Lathyrus sativus]
gi|293338642|gb|ADE43614.1| ribosomal protein S11 [Lathyrus sativus]
Length = 138
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G ++ ++FNNT +T+TD G I+WSS GF G+R+ +PFA
Sbjct: 12 KTGRIGSRKHPRKIPKGVIYIQASFNNTIVTVTDVGGRVISWSSAGSCGFKGTRRGTPFA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A AT + + GM +V + G G GRD+ALR + G + I DVT I +NGCR
Sbjct: 72 ATTATGNALRTVVDQGMQRADVSIKGPGRGRDAALRVIVRSGILLNVIRDVTPIPYNGCR 131
Query: 123 PRKRRRI 129
K+RR+
Sbjct: 132 APKKRRV 138
>gi|227505244|ref|ZP_03935293.1| ribosomal protein S11 [Corynebacterium striatum ATCC 6940]
gi|227198143|gb|EEI78191.1| ribosomal protein S11 [Corynebacterium striatum ATCC 6940]
Length = 114
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 58/111 (52%), Positives = 81/111 (72%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G A++ STFNNT ++ITDP G I+W+S VGF GSRK++PFAAQ+A ++ + KA HG
Sbjct: 4 GHAYIKSTFNNTIVSITDPSGAVISWASSGHVGFKGSRKSTPFAAQMAAENAARKAMEHG 63
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
M ++V V G G+GR++A+R+L+A G + SI D T HNGCRP KRR++
Sbjct: 64 MKKVDVFVKGPGSGRETAIRSLQAAGLEVSSITDATPQPHNGCRPTKRRKV 114
>gi|154507838|ref|ZP_02043480.1| hypothetical protein ACTODO_00320 [Actinomyces odontolyticus ATCC
17982]
gi|293190233|ref|ZP_06608729.1| 30S ribosomal protein S11 [Actinomyces odontolyticus F0309]
gi|315605925|ref|ZP_07880956.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|153797472|gb|EDN79892.1| hypothetical protein ACTODO_00320 [Actinomyces odontolyticus ATCC
17982]
gi|292821049|gb|EFF80002.1| 30S ribosomal protein S11 [Actinomyces odontolyticus F0309]
gi|315312207|gb|EFU60293.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 136
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 87/124 (70%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
+ R + KN+ +G A++ STFNNT +++TDP G +AW+S VGF GSRK++PFAAQ
Sbjct: 12 ARKPRRKISKNVTNGHAYIKSTFNNTIVSLTDPTGAVVAWASSGQVGFKGSRKSTPFAAQ 71
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + + +AQ HGM ++V V G G+GR++A+R+L+A G I SI DVT A NG RP
Sbjct: 72 LAAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEIGSIQDVTPQAFNGTRPP 131
Query: 125 KRRR 128
KRRR
Sbjct: 132 KRRR 135
>gi|242910201|ref|YP_002970677.1| ribosomal protein S11 [Alsophila spinulosa]
gi|218454870|gb|ACK77207.1| ribosomal protein S11 [Alsophila spinulosa]
Length = 130
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +IR + ++ + G H+ ++FNNT IT+TD G + S GF G+RK++
Sbjct: 1 MSKTLKKIRFRKGKRGVQKGVIHIQASFNNTIITVTDVRGQVVLRCSAGACGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + G+ EV +SG G GRD+ALRA+R G + + DVT + +N
Sbjct: 61 PFAAQAAAENAIRASVDRGLKQAEVMMSGPGPGRDTALRAIRRSGIILSFVRDVTPMPYN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|30352065|ref|NP_848092.1| ribosomal protein S11 [Adiantum capillus-veneris]
gi|62287464|sp|Q85FJ0|RR11_ADICA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|30266744|gb|AAP29423.1| ribosomal protein S11 [Adiantum capillus-veneris]
Length = 130
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRE-RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M +IR+R ++ + G H+ ++FNNT IT+TD G I WSS GF G+RK++
Sbjct: 1 MSNKSRKIRSRGGKRGVQKGVIHIQASFNNTIITVTDVRGQVIIWSSAGACGFKGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM EV +SG G GRD+ALRA+R G + I DVT + +N
Sbjct: 61 PFAAQAAAENAIKASVDRGMKQAEVMMSGPGPGRDTALRAIRRSGIILSFIRDVTPMPYN 120
Query: 120 GCRPRKRRRI 129
GCRP ++RR+
Sbjct: 121 GCRPPRKRRV 130
>gi|254458631|ref|ZP_05072055.1| ribosomal protein S11 [Campylobacterales bacterium GD 1]
gi|207084397|gb|EDZ61685.1| ribosomal protein S11 [Campylobacterales bacterium GD 1]
Length = 130
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/116 (52%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI G H+ ++FNNT +TITD GN IAWSS +GF GS+K++PFAAQ A +D AKA
Sbjct: 15 NIARGICHISASFNNTLVTITDEMGNMIAWSSAGSLGFKGSKKSTPFAAQAAVEDAVAKA 74
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
Q HG+ L +KV G G+GR++A +A+ AI G + + DVT + HNGCR KRRR+
Sbjct: 75 QVHGIKELGIKVQGPGSGRETATKAVGAIEGIRVTFMKDVTALPHNGCRAPKRRRV 130
>gi|229577787|ref|YP_002836123.1| ribosomal protein S11 [Megaleranthis saniculifolia]
gi|226933915|gb|ACO92048.1| ribosomal protein S11 [Megaleranthis saniculifolia]
Length = 138
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKTIPRIGSRRNGRIGSRKNGRRIPKGVIHVQASFNNTIVTVTDIRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|32480875|ref|NP_862786.1| ribosomal protein S11 [Calycanthus floridus var. glaucus]
gi|62287459|sp|Q7YJU5|RR11_CALFG RecName: Full=30S ribosomal protein S11, chloroplastic
gi|32399411|emb|CAD28753.1| ribosomal protein S11' [Calycanthus floridus var. glaucus]
Length = 138
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 19 RKNARRIPKGVIHVQASFNNTIVTVTDVTGRVVSWSSAGTCGFRGTRRGTPFAAQTAAAN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVIDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|254798676|ref|YP_003058318.1| ribosomal protein S11 [Parachlorella kessleri]
gi|229915624|gb|ACQ90967.1| ribosomal protein S11 [Parachlorella kessleri]
Length = 130
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 78/117 (66%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
R+ +V G AH+ STFNNT +TIT+ GN +AWSS GF G+RK +P AA+ A ++ +
Sbjct: 14 REKVVKGVAHIQSTFNNTIVTITNVKGNVLAWSSSGACGFKGARKKTPLAAKQAAENAAQ 73
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM + V+V G GAGR++ALR LR G I I D+T I HNGCRP K+RR+
Sbjct: 74 TCVSQGMKEVAVRVKGAGAGREAALRGLRDAGLIITIIRDITPIPHNGCRPPKKRRV 130
>gi|183221324|ref|YP_001839320.1| 30S ribosomal protein S11 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911415|ref|YP_001962970.1| 30S ribosomal protein S11 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776091|gb|ABZ94392.1| 30S Ribosomal protein S11 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779746|gb|ABZ98044.1| 30S ribosomal protein S11 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 137
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/116 (49%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
N+ G+ ++ ++FNNT ++ITD GN ++WSS ++GF GS+K++P+AAQVA + + KA
Sbjct: 22 NVPRGKVYIQASFNNTIVSITDMAGNVLSWSSSGMMGFRGSKKSTPYAAQVAATNAADKA 81
Query: 75 QN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+S ++V VSG G GR+SA+R+L G +I I DVT + HNGCRPRKRRR+
Sbjct: 82 IEAAGLSEVDVMVSGPGIGRESAIRSLTTKGLSIKLIKDVTPLPHNGCRPRKRRRV 137
>gi|167752410|ref|ZP_02424537.1| hypothetical protein ALIPUT_00654 [Alistipes putredinis DSM 17216]
gi|167660651|gb|EDS04781.1| hypothetical protein ALIPUT_00654 [Alistipes putredinis DSM 17216]
Length = 129
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 75/109 (68%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
A+V STFNN ITIT+ G+ I+WSS +GF GS+KN+P+AAQ A+ DC+ A + G+
Sbjct: 21 AYVHSTFNNVIITITNEVGDVISWSSAGKMGFRGSKKNTPYAAQTASADCAKVAYDMGLR 80
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++V V G GAGR+SA+R + G ++ I DVT + HNGCR RRR+
Sbjct: 81 KVKVYVKGPGAGRESAVRTIHGAGLEVMEIIDVTPMPHNGCRAPNRRRV 129
>gi|330850863|ref|YP_004376613.1| ribosomal protein S11 [Fistulifera sp. JPCC DA0580]
gi|328835683|dbj|BAK18979.1| ribosomal protein S11 [Fistulifera sp. JPCC DA0580]
Length = 130
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/114 (50%), Positives = 82/114 (71%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
SG H+ STFNNT +TIT+ G+T++W+S GF G+RK++PFAAQ A + + +A
Sbjct: 17 FTSGVVHIKSTFNNTIVTITNLTGDTVSWASGGSSGFKGARKSTPFAAQTAAEKAALEAL 76
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
N GM ++E+ V G G+GR++A+RA+ GF I+SI D+T + HNGCRP KRRR+
Sbjct: 77 NTGMKNVEILVKGQGSGRETAIRAIEGAGFDIISIQDITSVPHNGCRPPKRRRV 130
>gi|290487478|gb|ADD30123.1| ribosomal protein S11 [Antirrhinum majus]
Length = 138
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ RI + + I G HV ++FNNT +T+TD G I+W+S G
Sbjct: 1 MAKAMPRIGSRRNGRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGRVISWASAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVIDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|308746037|ref|YP_003934591.1| ribosomal protein S11 [Cheilanthes lindheimeri]
gi|302375470|gb|ADL29844.1| ribosomal protein S11 [Cheilanthes lindheimeri]
Length = 130
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M +IR + R+ I G H+ ++FNNT IT+TD G I W S GF G+RK++
Sbjct: 1 MSNKSKKIRSRKGRRGIQKGVIHIQASFNNTIITVTDVRGQVILWCSAGACGFRGTRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAAQ A ++ + + GM EV +SG G GRD+ALRA+R G + + DVT + +N
Sbjct: 61 PFAAQAAAENAIRASMDRGMKQAEVMMSGPGPGRDTALRAIRRSGVILSFVRDVTPMPYN 120
Query: 120 GCRPRKRRRI 129
GCRP ++RR+
Sbjct: 121 GCRPPRKRRV 130
>gi|313158328|gb|EFR57730.1| 30S ribosomal protein S11 [Alistipes sp. HGB5]
Length = 129
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 75/109 (68%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
A+V STFNN ITIT+ G+ I+WSS +GF GS+KN+P+AAQ A+ DC+ A + G+
Sbjct: 21 AYVHSTFNNVIITITNEVGDVISWSSAGKMGFRGSKKNTPYAAQTASADCAKVAYDMGLR 80
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++V V G GAGR+SA+R + G ++ I DVT + HNGCR RRR+
Sbjct: 81 KVKVYVKGPGAGRESAVRTIHGAGIEVMEIIDVTPLPHNGCRAPNRRRV 129
>gi|331268153|ref|YP_004347802.1| ribosomal protein S11 [Chlorella variabilis]
gi|325296330|gb|ADZ05050.1| ribosomal protein S11 [Chlorella variabilis]
Length = 130
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 77/117 (65%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
R+ ++ G AH+ STFNNT +TIT+ GN +AWSS GF G+RK +P AA+ A ++ +
Sbjct: 14 REKVLLGVAHIQSTFNNTIVTITNSKGNVLAWSSAGACGFKGARKKTPLAAKQAAENAAQ 73
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM + V V G GAGR++ALR LR G I I D+T I HNGCRP K+RRI
Sbjct: 74 TCVSQGMREIRVNVKGAGAGREAALRGLRDAGLNITIIRDITPIPHNGCRPPKKRRI 130
>gi|313680489|ref|YP_004058228.1| SSU ribosomal protein s11p [Oceanithermus profundus DSM 14977]
gi|313153204|gb|ADR37055.1| SSU ribosomal protein S11P [Oceanithermus profundus DSM 14977]
Length = 131
Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats.
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K R + +K + G+A + +T+NNT ITITD GN + WSS V+G+ GSRK +P+
Sbjct: 4 AKKTRTTRKKVKKQVAHGKAFIHATYNNTIITITDLDGNPVTWSSGGVIGYKGSRKGTPY 63
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ+A D + KAQN GM+ ++V V G GAGR+ A+RAL+A G + SI D T + HNGC
Sbjct: 64 AAQLAAMDAAKKAQNFGMTQVDVVVRGTGAGREQAIRALQASGLQVRSIVDDTPVPHNGC 123
Query: 122 RPRKRRR 128
RPRK++R
Sbjct: 124 RPRKKKR 130
>gi|115376092|ref|ZP_01463337.1| ribosomal protein S11 [Stigmatella aurantiaca DW4/3-1]
gi|310821020|ref|YP_003953378.1| 30S ribosomal protein S11 [Stigmatella aurantiaca DW4/3-1]
gi|115366907|gb|EAU65897.1| ribosomal protein S11 [Stigmatella aurantiaca DW4/3-1]
gi|309394092|gb|ADO71551.1| 30S ribosomal protein S11 [Stigmatella aurantiaca DW4/3-1]
Length = 145
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 70/115 (60%), Positives = 82/115 (71%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI++G H+ STFNNT ITITD GN I+WSS GF GSRK++PFAAQVA D +AKA
Sbjct: 31 NILNGVVHIQSTFNNTIITITDVSGNVISWSSAGARGFKGSRKSTPFAAQVAAGDAAAKA 90
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ V V G GAGR+SALRAL A G I I DVT I HNGCR KRRR+
Sbjct: 91 MEHGLKNVTVLVKGPGAGRESALRALAAAGLKISLIRDVTPIPHNGCRQPKRRRV 145
>gi|320094554|ref|ZP_08026320.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978469|gb|EFW10046.1| 30S ribosomal protein S11 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 135
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 62/123 (50%), Positives = 86/123 (69%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV 65
+ R + KN+ G A++ STFNNT +++TDP G +AW+S VGF GSRK++PFAAQ+
Sbjct: 12 RKPRRKISKNVTHGHAYIKSTFNNTIVSLTDPTGAVVAWASSGQVGFKGSRKSTPFAAQL 71
Query: 66 ATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
A + + +AQ HGM ++V V G G+GR++A+R+L+A G I SI DVT A NG RP K
Sbjct: 72 AAEAAARRAQEHGMKKVDVFVKGPGSGRETAIRSLQAAGLEIGSIQDVTPQAFNGTRPPK 131
Query: 126 RRR 128
RRR
Sbjct: 132 RRR 134
>gi|57242511|ref|ZP_00370449.1| ribosomal protein S11 [Campylobacter upsaliensis RM3195]
gi|57016796|gb|EAL53579.1| ribosomal protein S11 [Campylobacter upsaliensis RM3195]
Length = 130
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +KNI G ++ +TFNNT +T+TD GN IAW+S +GF GS+K++P
Sbjct: 1 MAKRKIVKKKIIKKNIAKGIVYISATFNNTMVTVTDEMGNAIAWASAGGLGFKGSKKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHN 119
+AAQ A + KA+ HG+ + +KV G G+GR++A++++ A+ G ++ + D+T +AHN
Sbjct: 61 YAAQQAVESALTKAKEHGIKEVGIKVQGPGSGRETAVKSVGAMEGIKVLFLKDITPLAHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|326334521|ref|ZP_08200732.1| 30S ribosomal protein S11 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693290|gb|EGD35218.1| 30S ribosomal protein S11 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 130
Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNI-VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +++ + + I SG AH+ +TFNN I++T+ G+ I+WSS + F GS+KN+
Sbjct: 1 MAKTNTKVTKKRKVVIESSGEAHISATFNNIIISLTNKKGDVISWSSAGKMKFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D + A + G+ + V V G G GR+SA+R++ G + I DVT + HN
Sbjct: 61 PYAAQVAAEDAAKMAFDAGLKKVRVFVKGPGVGRESAIRSIHNAGIEVTEIVDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRR++
Sbjct: 121 GCRPPKRRKV 130
>gi|297621700|ref|YP_003709837.1| 30S ribosomal protein S11 [Waddlia chondrophila WSU 86-1044]
gi|297377001|gb|ADI38831.1| 30S ribosomal protein S11 [Waddlia chondrophila WSU 86-1044]
Length = 134
Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 63/134 (47%), Positives = 85/134 (63%), Gaps = 5/134 (3%)
Query: 1 MPKSPSRIRNRER-----KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS 55
M K + + KN+ G HV +TFNNT I+ITDP G I+W+S VGFSGS
Sbjct: 1 MAKQTVKKGAVKTKKKVIKNVAVGVVHVKATFNNTIISITDPSGKVISWASAGKVGFSGS 60
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
RK+S FAA VA + + A ++GM +EV + G GAGR+SA+R + + G + +I D T
Sbjct: 61 RKSSAFAATVAAQNAAKTAASYGMKEVEVNLRGPGAGRESAVRGIISAGLQVTTIKDRTP 120
Query: 116 IAHNGCRPRKRRRI 129
+ HNGCRPRKRRR+
Sbjct: 121 VPHNGCRPRKRRRV 134
>gi|89280668|ref|YP_514885.1| ribosomal protein S11 [Solanum lycopersicum]
gi|91209020|ref|YP_538882.1| ribosomal protein S11 [Solanum bulbocastanum]
gi|108773162|ref|YP_635672.1| ribosomal protein S11 [Solanum tuberosum]
gi|91207754|sp|Q2MI68|RR11_SOLLC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|91207759|sp|Q2MIF5|RR11_SOLBU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|91207760|sp|Q2VEE7|RR11_SOLTU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|82754658|gb|ABB90072.1| ribosomal protein S11 [Solanum tuberosum]
gi|84371927|gb|ABC56245.1| ribosomal protein S11 [Solanum bulbocastanum]
gi|84372015|gb|ABC56332.1| ribosomal protein S11 [Solanum lycopersicum]
gi|88656836|gb|ABD47089.1| ribosomal protein S11 [Solanum tuberosum]
gi|89241704|emb|CAJ32427.1| ribosomal protein S11 [Solanum lycopersicum]
Length = 138
Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ +I + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPKISSRRNGRISSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|309322062|ref|YP_003933880.1| ribosomal protein S11 [Erodium texanum]
gi|197131624|gb|ACH47330.1| ribosomal protein S11 [Erodium texanum]
gi|300069155|gb|ADJ66277.1| ribosomal protein S11 [Erodium texanum]
Length = 141
Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 68/115 (59%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ I G HV ++FNNT +T+TD G + W+S V GF G RK +PFAAQ T+D
Sbjct: 26 RKIRKGIIHVQASFNNTIVTVTDVEGRVVTWASAGVCGFKGRRKGTPFAAQTTTEDAIGP 85
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
GM V + G+G GRD+ALR + G + I D+T + HNGCRP K+RR
Sbjct: 86 VVAQGMHRASVLIKGIGLGRDAALRTICRSGVRLYFIRDITPMPHNGCRPPKKRR 140
>gi|73667206|ref|YP_303222.1| 30S ribosomal protein S11 [Ehrlichia canis str. Jake]
gi|123732198|sp|Q3YRN1|RS11_EHRCJ RecName: Full=30S ribosomal protein S11
gi|72394347|gb|AAZ68624.1| SSU ribosomal protein S11P [Ehrlichia canis str. Jake]
Length = 126
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++++N+V G ++ +T+NN +T+TD G+++ +S F GS+K +P+AAQ
Sbjct: 6 KKKKRNVVVGVVYIHATYNNIIVTVTDQQGHSLICTSAGACSFKGSKKATPYAAQETASH 65
Query: 70 CSAKAQNH-GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
GM ++ +KVSG GAGR++A+RA++A + SI D T + HNGC+ RRR
Sbjct: 66 AVKTVVEQNGMKTVSIKVSGPGAGREAAIRAVQACNLNVTSIKDTTKLPHNGCKLPGRRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|11465991|ref|NP_054533.1| ribosomal protein S11 [Nicotiana tabacum]
gi|28261750|ref|NP_783264.1| ribosomal protein S11 [Atropa belladonna]
gi|78102571|ref|YP_358711.1| ribosomal protein S11 [Nicotiana sylvestris]
gi|62288967|sp|P69655|RR11_ATRBE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|62288968|sp|P69656|RR11_TOBAC RecName: Full=30S ribosomal protein S11, chloroplastic
gi|91207755|sp|Q3C1M2|RR11_NICSY RecName: Full=30S ribosomal protein S11, chloroplastic
gi|11861|emb|CAA77377.1| ribosomal protein S11 [Nicotiana tabacum]
gi|10442806|gb|AAG15579.1| ribosomal protein S11 [synthetic construct]
gi|20068364|emb|CAC88077.1| ribosomal protein S11 [Atropa belladonna]
gi|77799598|dbj|BAE46687.1| ribosomal protein S11 [Nicotiana sylvestris]
gi|225229|prf||1211235BL ribosomal protein S11
Length = 138
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRIR---------NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ +I + + I G HV ++FNNT +T+TD G ++WSS G
Sbjct: 1 MAKAIPKISSRRNGRIGSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|323148938|ref|YP_004222492.1| ribosomal protein S11 [Smilax china]
gi|308742629|gb|ADO33480.1| ribosomal protein S11 [Smilax china]
Length = 138
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ + + I G HV ++FNNT +TITD G ++W+S GF G+R+ +P+A
Sbjct: 12 KNGRIGSRKNGRRIPKGVIHVQASFNNTIVTITDVRGRVVSWASAGTSGFKGTRRGTPYA 71
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + GM EV + G G GRD+ALRA+R G + + DVT + HNGCR
Sbjct: 72 AQAAAVNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCR 131
Query: 123 PRKRRRI 129
P K+RR+
Sbjct: 132 PPKKRRV 138
>gi|269122555|ref|YP_003310732.1| ribosomal protein S11 [Sebaldella termitidis ATCC 33386]
gi|268616433|gb|ACZ10801.1| ribosomal protein S11 [Sebaldella termitidis ATCC 33386]
Length = 130
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 52/115 (45%), Positives = 78/115 (67%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
KNI +G A++ STFNNT +TITD G + W S GF G++K +PFAAQ+A + +
Sbjct: 15 KNIPNGIAYIHSTFNNTVVTITDTEGKVVIWKSGGTSGFKGTKKGTPFAAQIAAEQAAVT 74
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A +GM +EVK+ G G+GR++++R+++A G + I D+T + HNG RP K+RR
Sbjct: 75 AMENGMKQVEVKIKGPGSGREASIRSIQAAGLEVTKIVDITPVPHNGARPPKKRR 129
>gi|223936405|ref|ZP_03628317.1| ribosomal protein S11 [bacterium Ellin514]
gi|223894923|gb|EEF61372.1| ribosomal protein S11 [bacterium Ellin514]
Length = 202
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 84/115 (73%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G A++++TFNNT++ ITD GN + WSS VGF GSRK++ +AAQ D + +A
Sbjct: 88 NISNGIANILATFNNTQVCITDMQGNILGWSSAGRVGFKGSRKSTAYAAQQVAQDAARQA 147
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HGM +EV+V G G+GR+SA+RAL+AIG + I DVT + HNGCRPRK+RR+
Sbjct: 148 MAHGMREVEVRVKGPGSGRESAIRALQAIGLEVSVIKDVTPVPHNGCRPRKKRRV 202
>gi|148284192|ref|YP_001248282.1| 30S ribosomal protein S11 [Orientia tsutsugamushi str. Boryong]
gi|189183974|ref|YP_001937759.1| 30S ribosomal protein S11 [Orientia tsutsugamushi str. Ikeda]
gi|172047208|sp|A5CCJ0|RS11_ORITB RecName: Full=30S ribosomal protein S11
gi|226708393|sp|B3CT28|RS11_ORITI RecName: Full=30S ribosomal protein S11
gi|146739631|emb|CAM79420.1| 30S ribosomal protein S11 [Orientia tsutsugamushi str. Boryong]
gi|189180745|dbj|BAG40525.1| 30S ribosomal protein S11 [Orientia tsutsugamushi str. Ikeda]
Length = 126
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 55/120 (45%), Positives = 80/120 (66%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++RKNI G ++ STFNNT +T TD GN IA S +GF G++K +P+AAQV +
Sbjct: 7 KKKRKNITLGIVYIKSTFNNTIVTFTDMQGNAIAALSAGAIGFKGAKKATPYAAQVIVEK 66
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S A+ HG+ +L +++ G G+ R+SALRA+ F + SI D + +AHNGCRP K+RR+
Sbjct: 67 VSEVAKEHGIKTLSIRIQGAGSQRESALRAIFNQNFIVTSITDTSPVAHNGCRPPKKRRV 126
>gi|317134124|ref|YP_004123450.1| ribosomal protein S11 [Rhizanthella gardneri]
gi|255985055|gb|ACU46602.1| ribosomal protein S11 [Rhizanthella gardneri]
Length = 137
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRER-KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++I R + I G ++ ++FNNT +TI D G ++WSS GF G++K +
Sbjct: 8 MTKPSAKIGLRNNARRIPKGVIYIKASFNNTIVTIADLRGRVVSWSSAGTSGFIGTKKGT 67
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ T + + GM E+ + G G GRD+ALRA+R ++ S+ DVT I HN
Sbjct: 68 PYAAQATTLNTVRTIIDRGMRRAEIMIKGPGLGRDAALRAIRRSRISLNSVRDVTPIPHN 127
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 128 GCRPPKKRRV 137
>gi|228472193|ref|ZP_04056959.1| 30S ribosomal protein S11 [Capnocytophaga gingivalis ATCC 33624]
gi|228276396|gb|EEK15120.1| 30S ribosomal protein S11 [Capnocytophaga gingivalis ATCC 33624]
Length = 130
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNI-VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ +++ + + I SG AH+ +TFNN I++T+ G+ I+WSS + F GS+KN+
Sbjct: 1 MAKTNTKVTKKRKVVIESSGEAHISATFNNIIISLTNKKGDVISWSSAGKMKFRGSKKNT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQVA +D + A + G+ + V V G G GR+SA+R++ G + I DVT + HN
Sbjct: 61 PYAAQVAAEDAAKTAFDAGLKKVRVFVKGPGVGRESAIRSIHNAGIEVTEIIDVTPLPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRR++
Sbjct: 121 GCRPPKRRKV 130
>gi|152993917|ref|YP_001359638.1| 30S ribosomal protein S11 [Sulfurovum sp. NBC37-1]
gi|172048746|sp|A6QCS2|RS11_SULNB RecName: Full=30S ribosomal protein S11
gi|151425778|dbj|BAF73281.1| 30S ribosomal protein S11 [Sulfurovum sp. NBC37-1]
Length = 124
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G +V +TFNNT IT+TD GN I+WSS +GF GS+K++PFAA A D AKA+ +G
Sbjct: 13 GVVYVAATFNNTVITVTDEMGNVISWSSAGALGFKGSKKSTPFAATEAVADAMAKAKENG 72
Query: 79 MSSLEVKVSGLGAGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G G+GRD+A++A+ A G + + D+T + HNGCRP K+RR+
Sbjct: 73 IKEVGIKVQGPGSGRDTAVKAIGATEGIRVTFLKDITPLPHNGCRPPKKRRV 124
>gi|188996213|ref|YP_001930464.1| ribosomal protein S11 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931280|gb|ACD65910.1| ribosomal protein S11 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 129
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ-N 76
SG AH+ STFNNT +TITD GN + W++ GF G+RK++P+AAQ+A + KA
Sbjct: 17 SGIAHIQSTFNNTIVTITDKEGNALTWATGGTEGFKGTRKSTPYAAQLAAQKAAKKAMDE 76
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +EV V G GAGR+ A+R L A+G TI +I DVT I HNGCRP +RR+
Sbjct: 77 YGLKEVEVWVKGPGAGREPAIRTLAAMGLTIKAIRDVTPIPHNGCRPTSKRRV 129
>gi|163786166|ref|ZP_02180614.1| 30S ribosomal protein S11 [Flavobacteriales bacterium ALC-1]
gi|159878026|gb|EDP72082.1| 30S ribosomal protein S11 [Flavobacteriales bacterium ALC-1]
Length = 127
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M KS ++ R I G AH+ ++FNN I++T+ G+ I+WSS +GF GS+KN+P
Sbjct: 1 MAKSSTKKRKVIVDAI--GEAHITASFNNIIISLTNKKGDVISWSSAGKMGFRGSKKNTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A +D + A+ G+ ++V V G G GR+SA+R++ G + I DVT HNG
Sbjct: 59 YAAQLAAEDAAGVAKEAGLKKVKVYVKGPGNGRESAIRSIHNAGIEVSEIIDVTPQPHNG 118
Query: 121 CRPRKRRRI 129
CRP KRRR+
Sbjct: 119 CRPPKRRRV 127
>gi|116617140|ref|YP_817515.1| ribosomal protein S11 [Coffea arabica]
gi|122153652|sp|A0A368|RR11_COFAR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|116242196|gb|ABJ89711.1| ribosomal protein S11 [Coffea arabica]
Length = 138
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M K+ R+ + + I G HV ++F+NT +T+TD G ++WSS G
Sbjct: 1 MAKAIPRVGSRKNGRISSRKSARRIPKGVIHVQASFHNTIVTVTDVRGRVVSWSSAGTCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + +
Sbjct: 61 FRGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGIVLTFVR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>gi|288818042|ref|YP_003432389.1| ribosomal protein S11 [Hydrogenobacter thermophilus TK-6]
gi|288787441|dbj|BAI69188.1| ribosomal protein S11 [Hydrogenobacter thermophilus TK-6]
gi|308751643|gb|ADO45126.1| 30S ribosomal protein S11 [Hydrogenobacter thermophilus TK-6]
Length = 129
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + G +++STFNNT I ITDP GNT+ W S VGF G+RK++P+AAQ+A + +
Sbjct: 13 RTVTQGIVNILSTFNNTIINITDPQGNTLTWESGGTVGFKGTRKSTPYAAQLAAQKAARR 72
Query: 74 A-QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A Q +G+ +EV++ G GAGR+SALRA+ A G I I DVT I HNGCRP +RR+
Sbjct: 73 AIQEYGLQEVEVRIKGAGAGRESALRAIYASGLKIKLIRDVTPIPHNGCRPPSKRRV 129
>gi|289065122|ref|YP_003434008.1| ribosomal protein S11 [Typha latifolia]
gi|69216838|gb|AAZ03977.1| ribosomal protein S11 [Typha latifolia]
gi|281371805|gb|ADA63732.1| ribosomal protein S11 [Typha latifolia]
Length = 138
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/120 (42%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TD G ++W+S GF G+R+ +P+AAQ A +
Sbjct: 19 RKNGRRIPKGVIHVQASFNNTIITVTDVRGRVVSWASAGTSGFKGTRRGTPYAAQAAAVN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|197294144|ref|YP_002149765.1| ribosomal protein S11 [Cicer arietinum]
gi|224493274|sp|B5LMQ6|RR11_CICAR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|197089832|gb|ACH41102.1| ribosomal protein S11 [Cicer arietinum]
Length = 138
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS S+I ++ + I G +V ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSISKIGSRKNARIGSRKQTRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM EV + G G GRD+ALRA+R G + I
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVIIKGPGLGRDAALRAIRRSGILLRFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCR K+RR+
Sbjct: 121 DVTPMPHNGCRAPKKRRV 138
>gi|84394605|ref|ZP_00993307.1| 30S ribosomal protein S11 [Vibrio splendidus 12B01]
gi|84374779|gb|EAP91724.1| 30S ribosomal protein S11 [Vibrio splendidus 12B01]
Length = 101
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/101 (54%), Positives = 71/101 (70%)
Query: 29 NTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG 88
NT +TITD GN +AW++ GF GSRK++PFAAQVA + C A+ +G+ +LEV V G
Sbjct: 1 NTIVTITDRQGNALAWATAGGSGFRGSRKSTPFAAQVAAERCGEMAKEYGLKNLEVMVKG 60
Query: 89 LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR+S +RAL A GF I +I D T I HNGCRP K+RR+
Sbjct: 61 PGPGRESTVRALNAAGFRITNIVDATPIPHNGCRPPKKRRV 101
>gi|262038739|ref|ZP_06012099.1| 30S ribosomal protein S11 [Leptotrichia goodfellowii F0264]
gi|261747291|gb|EEY34770.1| 30S ribosomal protein S11 [Leptotrichia goodfellowii F0264]
Length = 129
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 85/128 (66%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P+ + ++ KNI +G A++ STFNNT +TITD G + W S GF G++K +P
Sbjct: 1 MAKKPAVSKKKKLKNIPNGIAYIHSTFNNTVVTITDSEGKVVIWKSGGTSGFKGTKKGTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ+A + + A +GM +E+K+ G G+GR++++R+++A G + I D+T + HNG
Sbjct: 61 FAAQIAAEQAAQVAIENGMKQIEIKIKGPGSGREASIRSIQATGLEVTRIVDITPVPHNG 120
Query: 121 CRPRKRRR 128
RP K+RR
Sbjct: 121 ARPPKKRR 128
>gi|69216840|gb|AAZ03978.1| ribosomal protein S11 [Yucca schidigera]
Length = 136
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/120 (41%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++W+S GF G+R+ +P+AAQ A +
Sbjct: 17 RKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFKGTRRQTPYAAQAAAAN 76
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 77 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 136
>gi|11465442|ref|NP_045167.1| ribosomal protein S11 [Cyanidium caldarium]
gi|48474682|sp|Q9TLV1|RR11_CYACA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|6466345|gb|AAF12927.1|AF022186_49 unknown [Cyanidium caldarium]
Length = 129
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 71/114 (62%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
++ G + STFNNT +T TD +G IAW+S GF G++K +PFAAQ AT+
Sbjct: 16 VIDGLIIINSTFNNTIVTATDCYGKVIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALL 75
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G + + VSG G GR++++R+ + G I+SI D+T + NGCRP K+RRI
Sbjct: 76 EQGTQRIHISVSGPGPGRETSIRSFQTSGLQIISIKDITSVPFNGCRPPKKRRI 129
>gi|320451275|ref|YP_004203371.1| 30S ribosomal protein S11 [Thermus scotoductus SA-01]
gi|320151444|gb|ADW22822.1| 30S ribosomal protein S11 [Thermus scotoductus SA-01]
Length = 129
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/128 (46%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + ++ + SG+A++ +++NNT +TITDP GN I WSS V+G+ GSRK +P
Sbjct: 1 MARKA--TKKKVKRQVASGKAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTP 58
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A D + KA +GM S++V V G GAGR+ A+RAL+A G + SI D T + HNG
Sbjct: 59 YAAQLAAMDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNG 118
Query: 121 CRPRKRRR 128
CRP+K+ R
Sbjct: 119 CRPKKKFR 126
>gi|7524920|ref|NP_045922.1| ribosomal protein S11 [Chlorella vulgaris]
gi|3024565|sp|P56359|RR11_CHLVU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|2224514|dbj|BAA57998.1| 30S ribosomal protein S11 [Chlorella vulgaris]
Length = 130
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 76/117 (64%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
R+ ++ G AH+ STFNNT +TIT GN +AWSS GF G+RK +P AA+ A ++ +
Sbjct: 14 REKVLLGVAHIQSTFNNTIVTITTNKGNVLAWSSAGACGFKGARKKTPLAAKQAAENAAQ 73
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM + V V G GAGR++ALR LR G I I D+T I HNGCRP K+RRI
Sbjct: 74 TCVSQGMREIRVNVKGAGAGREAALRGLRDAGLNITIIRDITPIPHNGCRPPKKRRI 130
>gi|213962921|ref|ZP_03391181.1| 30S ribosomal protein S11 [Capnocytophaga sputigena Capno]
gi|256820006|ref|YP_003141285.1| 30S ribosomal protein S11 [Capnocytophaga ochracea DSM 7271]
gi|213954578|gb|EEB65900.1| 30S ribosomal protein S11 [Capnocytophaga sputigena Capno]
gi|256581589|gb|ACU92724.1| ribosomal protein S11 [Capnocytophaga ochracea DSM 7271]
Length = 133
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 1 MPKSPSR----IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K ++ + R+ G AHV +TFNN I++T+ G+ IAWSS +GF GS+
Sbjct: 1 MAKQNAKNAKVSKKRKVVVESVGEAHVSATFNNVIISLTNKKGDVIAWSSAGKMGFRGSK 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
KN+P+AAQVA +D + A + G+ ++V V G G GR+SA+R + G + I DVT +
Sbjct: 61 KNTPYAAQVAAEDAAKVAFDAGLKKVKVYVKGPGNGRESAIRTIHNAGIEVTEIIDVTPL 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 PHNGCRPPKKRRV 133
>gi|315225424|ref|ZP_07867238.1| 30S ribosomal protein S11 [Capnocytophaga ochracea F0287]
gi|314944697|gb|EFS96732.1| 30S ribosomal protein S11 [Capnocytophaga ochracea F0287]
Length = 133
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 1 MPKSPSR----IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K ++ + R+ G AHV +TFNN I++T+ G+ IAWSS +GF GS+
Sbjct: 1 MAKQNAKNAKVSKKRKVVVESVGEAHVSATFNNVIISLTNKKGDVIAWSSAGKMGFRGSK 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
KN+P+AAQVA +D + A + G+ ++V V G G GR+SA+R + G + I DVT +
Sbjct: 61 KNTPYAAQVAAEDAAKVAFDSGLKKVKVYVKGPGNGRESAIRTIHNAGIEVTEIIDVTPL 120
Query: 117 AHNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 121 PHNGCRPPKKRRV 133
>gi|150406481|ref|YP_001315102.1| ribosomal protein S11 [Chlorokybus atmophyticus]
gi|126507718|gb|ABO15115.1| ribosomal protein S11 [Chlorokybus atmophyticus]
Length = 262
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K ++ ++R G AH+ +T NNT ITITD GNT +WSS +GF GSR+ + +A
Sbjct: 136 KLADKMGKKKRGVQRLGVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTSYA 195
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + + K+ G+ + VK+ G G GRDS+LR L+ G I I D T + HNGCR
Sbjct: 196 AQAAAETAAKKSIQLGIKDVTVKIRGFGPGRDSSLRGLQIGGLKIYKIQDTTPLPHNGCR 255
Query: 123 PRKRRR 128
P K+ R
Sbjct: 256 PPKKPR 261
>gi|13357816|ref|NP_078090.1| 30S ribosomal protein S11 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170761886|ref|YP_001752339.1| 30S ribosomal protein S11 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171920457|ref|ZP_02931764.1| ribosomal protein S11 [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|171920728|ref|ZP_02931941.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185179051|ref|ZP_02964792.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|186701983|ref|ZP_02971609.1| ribosomal protein S11 [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|188024247|ref|ZP_02996944.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188518672|ref|ZP_03004107.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524444|ref|ZP_03004457.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867583|ref|ZP_03079585.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273688|ref|ZP_03206223.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554050|ref|YP_002284655.1| 30S ribosomal protein S11 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550514|ref|ZP_03771463.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551444|ref|ZP_03772390.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|48475003|sp|Q9PQN5|RS11_UREPA RecName: Full=30S ribosomal protein S11
gi|189040442|sp|B1AIP5|RS11_UREP2 RecName: Full=30S ribosomal protein S11
gi|226708431|sp|B5ZB65|RS11_UREU1 RecName: Full=30S ribosomal protein S11
gi|11276586|pir||A82918 ribosomal protein S11 UU256 [imported] - Ureaplasma urealyticum
gi|6899226|gb|AAF30665.1|AE002122_34 ribosomal protein S11 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827463|gb|ACA32725.1| ribosomal protein S11 [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171902912|gb|EDT49201.1| ribosomal protein S11 [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|171903473|gb|EDT49762.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209036|gb|EDU06079.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|186700753|gb|EDU19035.1| ribosomal protein S11 [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|188018908|gb|EDU56948.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188997731|gb|EDU66828.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195659616|gb|EDX52996.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660640|gb|EDX53895.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249716|gb|EDY74497.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209541551|gb|ACI59780.1| 30S ribosomal protein S11 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225379259|gb|EEH01624.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379668|gb|EEH02030.1| ribosomal protein S11 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 121
Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 79/119 (66%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ + +G A++ +T NNT IT+ D G+ ++W+S +G+ G++K +P++A +A +
Sbjct: 3 KKKKLSFTNGIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTKKKTPYSAGIAAEA 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + G+ S+EV V+G GA RD+A+R+L+A G + I DVT I HNGCRP K+ R
Sbjct: 63 AAKAVIDMGLKSVEVHVNGTGASRDTAIRSLQAAGLEVTKIKDVTPIPHNGCRPPKKPR 121
>gi|309322146|ref|YP_003934061.1| ribosomal protein S11 [Geranium palmatum]
gi|197131630|gb|ACH47333.1| ribosomal protein S11 [Geranium palmatum]
gi|300069239|gb|ADJ66360.1| ribosomal protein S11 [Geranium palmatum]
Length = 141
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Query: 3 KSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ RIR + + I G HV ++F+NT +TITD G + W+S GF G R+ +PF
Sbjct: 14 RKNKRIRLRKNIRKIPKGIIHVQASFSNTIVTITDVEGRVVTWASAGACGFKGRRRGTPF 73
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ T + N GM V + G+G GRD+ALRA+ G + I D+T I HNGC
Sbjct: 74 AAQTTTKNAIQPLVNQGMKRANVLIKGIGRGRDAALRAIGRSGVRLNLIRDITPIPHNGC 133
Query: 122 RPRKRRR 128
RP K+RR
Sbjct: 134 RPPKKRR 140
>gi|292559540|ref|YP_003540964.1| 30S ribosomal protein S11 [Phoenix dactylifera]
gi|156598172|gb|ABU85350.1| ribosomal protein S11 [Elaeis oleifera]
gi|290790948|gb|ADD63203.1| 30S ribosomal protein S11 [Phoenix dactylifera]
gi|294620610|gb|ADF28179.1| 30S ribosomal protein S11 [Phoenix dactylifera]
Length = 138
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 50/120 (41%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++W+S GF G+R+ +P+AAQ A +
Sbjct: 19 RKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFKGTRRGTPYAAQAAAVN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSLVRDVTPMPHNGCRPPKKRRV 138
>gi|295065760|ref|YP_003587700.1| ribosomal protein S11 [Anomochloa marantoidea]
gi|251765284|gb|ACT15438.1| ribosomal protein S11 [Anomochloa marantoidea]
Length = 143
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I+ G HV ++FNNT IT+TD G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRIIKGVIHVQASFNNTIITVTDLQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GMQRAEVMVKGAGSGRDAALRAIGKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|194033179|ref|YP_002000518.1| ribosomal protein S11 [Brachypodium distachyon]
gi|224493272|sp|B3TN82|RR11_BRADI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|193075587|gb|ACF08670.1| ribosomal protein S11 [Brachypodium distachyon]
Length = 143
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|11467224|ref|NP_043056.1| ribosomal protein S11 [Zea mays]
gi|133724|sp|P09561|RR11_MAIZE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|552742|gb|AAA84494.1| ribosomal protein S11 (rpS11) [Zea mays]
gi|902254|emb|CAA60318.1| ribosomal protein S11 [Zea mays]
Length = 143
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGIIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|14017604|ref|NP_114290.1| ribosomal protein S11 [Triticum aestivum]
gi|118430334|ref|YP_874769.1| ribosomal protein S11 [Agrostis stolonifera]
gi|118430419|ref|YP_874685.1| ribosomal protein S11 [Hordeum vulgare subsp. vulgare]
gi|159106896|ref|YP_001531314.1| ribosomal protein S11 [Lolium perenne]
gi|48474927|sp|Q95H53|RR11_WHEAT RecName: Full=30S ribosomal protein S11, chloroplastic
gi|125987662|sp|A1EA41|RR11_AGRST RecName: Full=30S ribosomal protein S11, chloroplastic
gi|152060519|sp|A1E9M3|RR11_HORVU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|172048164|sp|A8Y9B9|RR11_LOLPR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|13928237|dbj|BAB47066.1| ribosomal protein S11 [Triticum aestivum]
gi|118201073|gb|ABK79444.1| ribosomal protein S11 [Hordeum vulgare subsp. vulgare]
gi|118201243|gb|ABK79612.1| ribosomal protein S11 [Agrostis stolonifera]
gi|158934430|emb|CAO86008.1| ribosomal protein S11 [Lolium perenne]
Length = 143
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|47220891|emb|CAG03098.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
AHV +T+NNT I +TD G ++ +S GF +K++P AAQ A +AKA G+
Sbjct: 106 IAHVKATYNNTHIQVTDSAGKSMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKGV 165
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + V V GLG GR SA++ L G +VSI D T + HNGCRPRK RR+
Sbjct: 166 TFVRVVVKGLGPGRLSAIKGLTMGGLEVVSITDNTPVPHNGCRPRKARRV 215
>gi|183508828|ref|ZP_02958281.1| ribosomal protein S11 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|182675794|gb|EDT87699.1| ribosomal protein S11 [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 121
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 79/119 (66%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ + +G A++ +T NNT IT+ D G+ ++W+S +G+ G++K +P++A +A +
Sbjct: 3 KKKKLSFTNGIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTKKKTPYSAGIAAEA 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + G+ S+EV V+G GA RD+A+R+L+A G + I DVT I HNGCRP K+ R
Sbjct: 63 AAKAVIDMGLKSVEVHVNGTGASRDTAIRSLQATGLEVTKIKDVTPIPHNGCRPPKKPR 121
>gi|24213463|ref|NP_710944.1| 30S ribosomal protein S11 [Leptospira interrogans serovar Lai str.
56601]
gi|45658678|ref|YP_002764.1| 30S ribosomal protein S11 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|116327249|ref|YP_796969.1| 30S ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116327289|ref|YP_797009.1| 30S ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332097|ref|YP_801815.1| 30S ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|7388115|sp|Q9XD11|RS11_LEPIN RecName: Full=30S ribosomal protein S11
gi|59798771|sp|Q72NI6|RS11_LEPIC RecName: Full=30S ribosomal protein S11
gi|122280173|sp|Q04PW3|RS11_LEPBJ RecName: Full=30S ribosomal protein S11
gi|122284904|sp|Q055B9|RS11_LEPBL RecName: Full=30S ribosomal protein S11
gi|5163229|gb|AAD40608.1|AF115283_27 ribosomal protein S11 [Leptospira interrogans]
gi|24194235|gb|AAN47962.1| 30S ribosomal protein S11 [Leptospira interrogans serovar Lai str.
56601]
gi|45601922|gb|AAS71401.1| 30S ribosomal protein S11 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|116119993|gb|ABJ78036.1| 30S Ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120033|gb|ABJ78076.1| 30S Ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125786|gb|ABJ77057.1| 30S Ribosomal protein S11 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 136
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G+ ++ ++FNNT +TITD GNTI+WS+ +GF GS+K++P+AAQ+A + + KA
Sbjct: 22 VPRGKVYITASFNNTIVTITDMAGNTISWSTSGAMGFRGSKKSTPYAAQIAAGNAAEKAM 81
Query: 76 N-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ G+ ++V VSG G GR+SA+R+L A G I I DVT + HNGCRPRKRRR+
Sbjct: 82 DSAGLQEVDVMVSGPGIGRESAIRSLVARGLNIKMIKDVTPLPHNGCRPRKRRRV 136
>gi|48478802|ref|YP_024409.1| ribosomal protein S11 [Saccharum hybrid cultivar SP-80-3280]
gi|50812560|ref|YP_054662.1| ribosomal protein S11 [Saccharum officinarum]
gi|118614524|ref|YP_899440.1| ribosomal protein S11 [Sorghum bicolor]
gi|260677451|ref|YP_003208219.1| ribosomal protein S11 [Coix lacryma-jobi]
gi|62287429|sp|Q6ENT1|RR11_SACOF RecName: Full=30S ribosomal protein S11, chloroplastic
gi|75291218|sp|Q6L369|RR11_SACHY RecName: Full=30S ribosomal protein S11, chloroplastic
gi|125987671|sp|A1E9V7|RR11_SORBI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|48478704|gb|AAT44724.1| ribosomal protein S11 [Saccharum hybrid cultivar SP80-3280]
gi|49659544|dbj|BAD27325.1| ribosomal protein S11 [Saccharum hybrid cultivar NCo 310]
gi|118201158|gb|ABK79528.1| ribosomal protein S11 [Sorghum bicolor]
gi|209361389|gb|ACI43304.1| ribosomal protein S11 [Coix lacryma-jobi]
gi|321496091|gb|ADW93920.1| ribosomal protein S11 [Bouteloua gracilis]
Length = 143
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|11467041|ref|NP_041948.1| ribosomal protein S11 [Euglena gracilis]
gi|133721|sp|P27419|RR11_EUGGR RecName: Full=30S ribosomal protein S11, chloroplastic
gi|336888|gb|AAA84229.1| ribosomal protein S11 [Euglena gracilis]
gi|415791|emb|CAA50135.1| 30S ribosomal protein S11 [Euglena gracilis]
gi|228206|prf||1718312B ribosomal protein S11
Length = 129
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 77/129 (59%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K +I +K G H+ +T+NN ++++DP GN IAWSS GF S+K +P
Sbjct: 1 MIKQKKKIIKITKKKFPKGIVHIKTTYNNVLVSVSDPKGNVIAWSSSGACGFKSSKKATP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
A + T KA G+ +E+ +SG G GR++AL+ ++++G I I DVT + HNG
Sbjct: 61 LATKTTTAIAVKKAIEQGLQKVEINISGPGTGRETALKCVQSLGLRISCIRDVTPLPHNG 120
Query: 121 CRPRKRRRI 129
CRP KRRRI
Sbjct: 121 CRPSKRRRI 129
>gi|11466822|ref|NP_039418.1| ribosomal protein S11 [Oryza sativa Japonica Group]
gi|50234004|ref|YP_052782.1| ribosomal protein S11 [Oryza nivara]
gi|109156617|ref|YP_654236.1| ribosomal protein S11 [Oryza sativa Indica Group]
gi|253729587|ref|YP_003029771.1| ribosomal protein S11 [Bambusa oldhamii]
gi|255961414|ref|YP_003097607.1| ribosomal protein S11 [Dendrocalamus latiflorus]
gi|62287425|sp|Q6ENE1|RR11_ORYNI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|148839645|sp|P0C462|RR11_ORYSA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|148839646|sp|P0C463|RR11_ORYSI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|148839647|sp|P0C464|RR11_ORYSJ RecName: Full=30S ribosomal protein S11, chloroplastic
gi|12019|emb|CAA33980.1| ribosomal protein S11 [Oryza sativa Japonica Group]
gi|42795509|gb|AAS46076.1| ribosomal protein S11 [Oryza sativa Indica Group]
gi|42795576|gb|AAS46142.1| ribosomal protein S11 [Oryza sativa Japonica Group]
gi|42795640|gb|AAS46205.1| ribosomal protein S11 [Oryza sativa Japonica Group]
gi|49615028|dbj|BAD26811.1| ribosomal protein S11 [Oryza nivara]
gi|246367097|gb|ACS94708.1| ribosomal protein S11 [Bambusa oldhamii]
gi|255040291|gb|ACT99951.1| ribosomal protein S11 [Dendrocalamus latiflorus]
gi|290790596|gb|ADD62856.1| ribosomal protein S11 [Oryza sativa Japonica Group]
gi|290790665|gb|ADD62924.1| ribosomal protein S11 [Oryza meridionalis]
gi|290790734|gb|ADD62992.1| ribosomal protein S11 [Oryza australiensis]
gi|226640|prf||1603356BP ribosomal protein S11
Length = 143
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|218176273|ref|YP_002364530.1| ribosomal protein S11 [Festuca arundinacea]
gi|215882357|gb|ACJ70787.1| ribosomal protein S11 [Festuca arundinacea]
Length = 143
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + + G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRVTKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRFSCIRDVTPMPHNGCRPPKKRRL 143
>gi|62287413|sp|Q672I7|RR11_PENAM RecName: Full=30S ribosomal protein S11, chloroplastic
gi|51872075|gb|AAU12165.1| ribosomal protein S11 [Pennisetum glaucum]
Length = 143
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 86
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 87 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL 143
>gi|156598366|gb|ABU85443.1| ribosomal protein S11 [Musa acuminata]
Length = 138
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 51/120 (42%), Positives = 73/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T+TD G ++W+S GF G+R+ +P+AAQ A +
Sbjct: 19 RKNGRRIPKGIIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFKGTRRGTPYAAQAAALN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
N GM EV + G G GRD+ALRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRTVVNQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 138
>gi|218294780|ref|ZP_03495634.1| ribosomal protein S11 [Thermus aquaticus Y51MC23]
gi|218244688|gb|EED11212.1| ribosomal protein S11 [Thermus aquaticus Y51MC23]
Length = 142
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/128 (48%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M +R + ++ + SGRA++ ++ NNT +TITDP GN I WSS V+G+ GSRK +P
Sbjct: 14 MAGKATR--KKVKRQVASGRAYIHASHNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTP 71
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ+A D + KA +GM S++V V G GAGR+ A+RAL+A G + SI D T + HNG
Sbjct: 72 YAAQLAAMDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNG 131
Query: 121 CRPRKRRR 128
CRP+K+ R
Sbjct: 132 CRPKKKFR 139
>gi|311748489|ref|ZP_07722274.1| 30S ribosomal protein S11 [Algoriphagus sp. PR1]
gi|126577006|gb|EAZ81254.1| 30S ribosomal protein S11 [Algoriphagus sp. PR1]
Length = 132
Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats.
Identities = 56/132 (42%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 1 MPKS---PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M + ++ + R K G+AH+ ++FNN I+IT+ G I+W+S +GF GS+K
Sbjct: 1 MAQKRNDKAKGKKRVVKVEAVGQAHIRASFNNIIISITNNAGQVISWASAGKMGFRGSKK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
N+P+AAQ+A +C A + G+ +EV V G G+GR+SA+R L+ +G + +I DVT +
Sbjct: 61 NTPYAAQMAAQNCGQVAYDLGLRKIEVFVKGPGSGRESAIRTLQNVGLDVTTITDVTPMP 120
Query: 118 HNGCRPRKRRRI 129
HNGCRP KRRR+
Sbjct: 121 HNGCRPPKRRRV 132
>gi|153012180|ref|YP_001381696.1| ribosomal protein S11 [Medicago truncatula]
Length = 138
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS +I + + I G +V ++FNNT +T+TD G I+WSS G
Sbjct: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F G+R+ +PFAAQ A + + GM V + G G GRD+ALRA+ G + I
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT I HNGCR K+RR+
Sbjct: 121 DVTPIPHNGCRAPKKRRV 138
>gi|225714902|gb|ACO13297.1| 28S ribosomal protein S11, mitochondrial precursor [Esox lucius]
Length = 198
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 73/129 (56%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
MP S +R +K AH+ +T+NNT I +TD G + +S GF +K++P
Sbjct: 70 MPGQDSPLRWGGKKYDELPIAHIKATYNNTHIQVTDNEGKYMVRTSCGTEGFRNVKKSTP 129
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
AAQ A + KA G++ + V V GLG GR SA++ L G +VSI D T + HNG
Sbjct: 130 VAAQTAGIAAATKATVAGVTFVRVLVKGLGPGRLSAIKGLTMGGLEVVSITDNTPVPHNG 189
Query: 121 CRPRKRRRI 129
CRPRK RRI
Sbjct: 190 CRPRKARRI 198
>gi|165940338|ref|ZP_02228859.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
IP275]
gi|165911728|gb|EDR30384.1| ribosomal protein S11 [Yersinia pestis biovar Orientalis str.
IP275]
Length = 113
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 56/113 (49%), Positives = 76/113 (67%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKTVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDV 113
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DV
Sbjct: 61 FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDV 113
>gi|323148862|ref|YP_004221954.1| ribosomal protein S11 [Erodium carvifolium]
gi|316926326|gb|ADU58179.1| ribosomal protein S11 [Erodium carvifolium]
Length = 141
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 1 MPKSPSRI------------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPK 48
M K +I + + I G HV ++F+NT +TITD G + +S
Sbjct: 1 MAKPIRKIYSYSLRRNRRVRLRKNIRKIERGIIHVQASFSNTIVTITDLWGRVVTGASAG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIV 108
GF R+ +PFAAQ T++ + GM V + G+G GRD+ALRA+ G +
Sbjct: 61 ACGFKARRRGTPFAAQTTTEEAIKPLVDQGMKRAGVLIKGMGPGRDAALRAISRSGVKLR 120
Query: 109 SICDVTMIAHNGCRPRKRRR 128
I D+T + HNGCRP K+RR
Sbjct: 121 FIRDITPVPHNGCRPPKKRR 140
>gi|156598518|gb|ABU85517.1| ribosomal protein S11 [Passiflora biflora]
Length = 132
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 47/118 (39%), Positives = 65/118 (55%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+ + I+ G HV +TFNNT I++TD G I WS F G RK + FAA++ +D
Sbjct: 15 KSARKILKGFFHVQTTFNNTIISVTDKQGGVIYWSCAGTCRFKGPRKGTAFAARIVAEDA 74
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
S A+ GM V + G G R + L+A G + + DVT + HNGCRP K+RR
Sbjct: 75 SRVAKAQGMRQANVLIKGPGRARKTVLKAFCQSGIKLDYVRDVTPLPHNGCRPPKKRR 132
>gi|330814177|ref|YP_004358416.1| SSU ribosomal protein S11p (S14e) [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487272|gb|AEA81677.1| SSU ribosomal protein S11p (S14e) [Candidatus Pelagibacter sp.
IMCC9063]
Length = 156
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 63/114 (55%), Positives = 89/114 (78%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+++G+A V +TFNNT I+ITD GN ++WSS GF GSRK++P+AAQVA DD + KA
Sbjct: 43 VINGKAFVNATFNNTIISITDKDGNVLSWSSAGSKGFKGSRKSTPYAAQVAADDAALKAA 102
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ +++V+V G G+GR++ALRAL+A GF I+SI D + IAHNGCRP K+RR+
Sbjct: 103 EYGLKNIDVEVKGPGSGRETALRALQARGFKILSIKDTSPIAHNGCRPPKKRRV 156
>gi|11466964|ref|NP_054385.1| ribosomal protein S11 [Epifagus virginiana]
gi|266962|sp|P30059|RR11_EPIVI RecName: Full=Plastid 30S ribosomal protein S11
gi|336932|gb|AAA65859.1| ribosomal protein S11 [Epifagus virginiana]
Length = 136
Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ I G HV ++FNNT + +TD G ++WSS GF G+R+ + FAAQ+A +
Sbjct: 19 RKSSFRIQKGVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTRRGTSFAAQIAATN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV + G G GRD+ LRA+R G + + DVT + HNGCRP K+RR+
Sbjct: 79 AIRIV--QGMQRAEVMIKGPGIGRDAVLRAIRGSGVLLTFVRDVTPMPHNGCRPPKKRRV 136
>gi|161830869|ref|YP_001596208.1| 30S ribosomal protein S11 [Coxiella burnetii RSA 331]
gi|189040411|sp|A9NAZ3|RS11_COXBR RecName: Full=30S ribosomal protein S11
gi|161762736|gb|ABX78378.1| ribosomal protein S11 [Coxiella burnetii RSA 331]
Length = 123
Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + + G AH+ +TFNNT I+++DP GN + + S GF GSRK +P+ AQ+A+++
Sbjct: 3 KKRYRKVTEGIAHIKATFNNTMISVSDPQGNVLCFRSAGGSGFKGSRKGTPYGAQMASEE 62
Query: 70 CSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A++ M + V+V G GAGRDSA+R LR+ G ++ + D T + HNGCRPRK+RR
Sbjct: 63 VGRLARDNFDMRRIAVRVKGPGAGRDSAIRGLRSAGLEVIYLEDRTPLPHNGCRPRKKRR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|148231631|ref|NP_001088732.1| mitochondrial ribosomal protein S11 [Xenopus laevis]
gi|56269550|gb|AAH87385.1| LOC495996 protein [Xenopus laevis]
Length = 195
Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 73/128 (57%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+P S++R +K AHV +T+NNT I +T ++ +S GF ++K++
Sbjct: 67 LPGQSSQLRWGSKKFEEIPIAHVKATYNNTHIQVTSYENQSLVRTSCGTEGFKNAKKSTS 126
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
AAQ A +AKA G+S + V V GLG GR SA++ L G ++SI D T I HNG
Sbjct: 127 VAAQTAGISAAAKAIGKGVSHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDDTPIPHNG 186
Query: 121 CRPRKRRR 128
CRPRK RR
Sbjct: 187 CRPRKARR 194
>gi|213983215|ref|NP_001135722.1| mitochondrial ribosomal protein S11 [Xenopus (Silurana) tropicalis]
gi|197246539|gb|AAI69180.1| Unknown (protein for MGC:189680) [Xenopus (Silurana) tropicalis]
Length = 195
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 73/128 (57%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+P S++R +K AHV +T+NNT I +T ++ +S GF ++K++
Sbjct: 67 LPGQNSQLRWGGKKFEEIPIAHVKATYNNTHIQVTSHESQSLVRTSCGTEGFKNAKKSTA 126
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
AAQ A +AKA G+S + V V GLG GR SA++ L G ++SI D T I HNG
Sbjct: 127 VAAQTAGISAAAKAIGKGVSHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNG 186
Query: 121 CRPRKRRR 128
CRPRK RR
Sbjct: 187 CRPRKARR 194
>gi|320335498|ref|YP_004172209.1| 30S ribosomal protein S11 [Deinococcus maricopensis DSM 21211]
gi|319756787|gb|ADV68544.1| 30S ribosomal protein S11 [Deinococcus maricopensis DSM 21211]
Length = 130
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 60/129 (46%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPK-SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R R+NI +GRA++ +++NNT +TITD GN++AWSS +G+ GS+K +
Sbjct: 1 MAKAQKGKTPRRVRRNIGAGRAYIHASYNNTIVTITDADGNSVAWSSGGTIGYKGSKKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
P+AAQ+A D KAQ+ GM+ ++V V G G+GR+ A+RA++A G + SI D T + HN
Sbjct: 61 PYAAQLAAADAVKKAQSFGMNIVDVIVRGTGSGREQAIRAIQASGIDVKSIMDDTPVPHN 120
Query: 120 GCRPRKRRR 128
GCRP K+ R
Sbjct: 121 GCRPAKKNR 129
>gi|29653613|ref|NP_819305.1| 30S ribosomal protein S11 [Coxiella burnetii RSA 493]
gi|154707297|ref|YP_001425159.1| 30S ribosomal protein S11 [Coxiella burnetii Dugway 5J108-111]
gi|212213227|ref|YP_002304163.1| 30S ribosomal protein S11 [Coxiella burnetii CbuG_Q212]
gi|34925217|sp|Q83EQ4|RS11_COXBU RecName: Full=30S ribosomal protein S11
gi|189040410|sp|A9KD08|RS11_COXBN RecName: Full=30S ribosomal protein S11
gi|226708353|sp|B6J240|RS11_COXB2 RecName: Full=30S ribosomal protein S11
gi|29540875|gb|AAO89819.1| SSU ribosomal protein S11P [Coxiella burnetii RSA 493]
gi|154356583|gb|ABS78045.1| SSU ribosomal protein S11P [Coxiella burnetii Dugway 5J108-111]
gi|212011637|gb|ACJ19018.1| SSU ribosomal protein S11P [Coxiella burnetii CbuG_Q212]
Length = 123
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + + G AH+ +TFNNT I+++DP GN + + S GF GSRK +P+ AQ+A+++
Sbjct: 3 KKRYRKVTEGIAHIKATFNNTMISVSDPQGNVLCFRSAGGSGFKGSRKGTPYGAQMASEE 62
Query: 70 CSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A++ M + V+V G GAGRDSA+R LR+ G ++ + D T + HNGCRPRK+RR
Sbjct: 63 VGRLARDNFDMRRIAVRVKGPGAGRDSAIRGLRSAGLEVIHLEDRTPLPHNGCRPRKKRR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|307297369|ref|ZP_07577175.1| 30S ribosomal protein S11 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916629|gb|EFN47011.1| 30S ribosomal protein S11 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 128
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 74/104 (71%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G H+ S+FNNT IT+TDP GNT+ W+S G+SGS+K++P+AAQ+ D + +A
Sbjct: 17 RGVVHIKSSFNNTIITLTDPEGNTLMWTSGGTAGYSGSKKSTPYAAQLGADKIAKEAIKL 76
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
G++ + ++V G G+GR++A+R ++A G T+ ++ D+T + HNGC
Sbjct: 77 GITRVGIEVKGPGSGREAAIRTIQAAGLTVETLKDITPLPHNGC 120
>gi|34811539|pdb|1PNS|K Chain K, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811595|pdb|1PNX|K Chain K, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966333|pdb|1VOQ|K Chain K, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966386|pdb|1VOS|K Chain K, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966439|pdb|1VOV|K Chain K, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966492|pdb|1VOX|K Chain K, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966545|pdb|1VOZ|K Chain K, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|67464180|pdb|1X18|G Chain G, Contact Sites Of Era Gtpase On The Thermus Thermophilus
30s Subunit
gi|224510690|pdb|3FIC|K Chain K, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
gi|300508615|pdb|3MR8|K Chain K, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508670|pdb|3MS0|K Chain K, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812560|pdb|3PYN|K Chain K, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812613|pdb|3PYQ|K Chain K, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812666|pdb|3PYS|K Chain K, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812719|pdb|3PYU|K Chain K, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 119
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/116 (51%), Positives = 85/116 (73%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
++ + SGRA++ +++NNT +TITDP GN I WSS V+G+ GSRK +P+AAQ+A D +
Sbjct: 1 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAK 60
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
KA +GM S++V V G GAGR+ A+RAL+A G + SI D T + HNGCRP+K+ R
Sbjct: 61 KAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR 116
>gi|291296965|ref|YP_003508363.1| 30S ribosomal protein S11 [Meiothermus ruber DSM 1279]
gi|290471924|gb|ADD29343.1| ribosomal protein S11 [Meiothermus ruber DSM 1279]
Length = 133
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
Query: 1 MP--KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M KS + + + ++ + +G+A + +++NNT +TITD G+ + WSS V+G+ GSRK
Sbjct: 1 MAEKKSATSRKKKIKRQVTTGKAFIHASYNNTIVTITDNDGHPVTWSSGGVIGYKGSRKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A D + KAQ +GMSS+EV V G GAGR+ A+RAL+A G + SI D T H
Sbjct: 61 TPYAAQLAAMDAAKKAQGYGMSSVEVVVRGTGAGREQAIRALQASGLQVRSIVDDTPTPH 120
Query: 119 NGCRPRKRRR 128
NGCRPRK+ R
Sbjct: 121 NGCRPRKKFR 130
>gi|297623300|ref|YP_003704734.1| 30S ribosomal protein S11 [Truepera radiovictrix DSM 17093]
gi|297164480|gb|ADI14191.1| 30S ribosomal protein S11 [Truepera radiovictrix DSM 17093]
Length = 131
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/131 (45%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 1 MPKSPSR--IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M K ++ + R R+N+V G+A++ +++NNT +TITD GN +AWSS +G+ GS+K
Sbjct: 1 MTKQAAKNKTKKRVRRNLVEGKAYIHASYNNTIVTITDMDGNAVAWSSSGSIGYKGSKKG 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+P+AAQ+A D + KAQN G++ L++ + G G+GR+ A+R+++A G + SI D T + H
Sbjct: 61 TPYAAQLAAADATRKAQNMGVTQLDIVIRGTGSGREQAIRSIQATGVNVRSIVDATPVPH 120
Query: 119 NGCRPRKRRRI 129
NGCRPRKR+R+
Sbjct: 121 NGCRPRKRKRV 131
>gi|219674008|ref|YP_002456492.1| ribosomal protein S11 [Trifolium subterraneum]
gi|193788977|gb|ACF20573.1| ribosomal protein S11 [Trifolium subterraneum]
Length = 136
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 1 MPKSPSRI---------RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG 51
M KS +I + + I G +V ++FNN +T+TD G I+WSS G
Sbjct: 1 MAKSIRKIGSRKSGRIGSRKHPRKIYKGVIYVQASFNNIIVTVTDLRGRAISWSSAGSCG 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
F GSR+++PFAAQ + + GM +V + G G GRD+ALRA+ G + +
Sbjct: 61 FKGSRRSTPFAAQTVAGNAIRTVE--GMKRADVIIKGPGPGRDAALRAICRSGIRLRFLR 118
Query: 112 DVTMIAHNGCRPRKRRRI 129
D T + HNGCR K+RRI
Sbjct: 119 DATPLPHNGCRAPKKRRI 136
>gi|290487498|gb|ADD30133.1| ribosomal protein S11 [Rhododendron simsii]
Length = 138
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 68/120 (56%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + + G H+ ++F+NT +T+TD G ++WSS F R+ +PFAAQ +
Sbjct: 19 RKNTRKLTKGVIHIQASFHNTIVTVTDVRGRVVSWSSAGTCRFRAKRRATPFAAQTTVVN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ G+ +V + G G GRD+ALR +R G + I DVT + HNGCRP K+RR+
Sbjct: 79 AIRPVVDQGLKRAKVMIKGPGRGRDAALRTIRKNGIRLTCIRDVTPMPHNGCRPPKKRRV 138
>gi|153210646|ref|ZP_01947652.1| ribosomal protein S11 [Coxiella burnetii 'MSU Goat Q177']
gi|212218097|ref|YP_002304884.1| 30S ribosomal protein S11 [Coxiella burnetii CbuK_Q154]
gi|226708352|sp|B6J5F5|RS11_COXB1 RecName: Full=30S ribosomal protein S11
gi|120575103|gb|EAX31727.1| ribosomal protein S11 [Coxiella burnetii 'MSU Goat Q177']
gi|212012359|gb|ACJ19739.1| SSU ribosomal protein S11P [Coxiella burnetii CbuK_Q154]
Length = 123
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + + G AH+ +TFNNT I+++D GN + + S GF GSRK +P+ AQ+A+++
Sbjct: 3 KKRYRKVTEGIAHIKATFNNTMISVSDSQGNVLCFRSAGGSGFKGSRKGTPYGAQMASEE 62
Query: 70 CSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A++ M + V+V G GAGRDSA+R LR+ G ++ + D T + HNGCRPRK+RR
Sbjct: 63 VGRLARDNFDMRRIAVRVKGPGAGRDSAIRGLRSAGLEVIHLEDRTPLPHNGCRPRKKRR 122
Query: 129 I 129
+
Sbjct: 123 V 123
>gi|261415795|ref|YP_003249478.1| 30S ribosomal protein S11 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372251|gb|ACX74996.1| 30S ribosomal protein S11 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326862|gb|ADL26063.1| ribosomal protein S11 [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 146
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/123 (49%), Positives = 88/123 (71%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
+I+ +++ + G A V ++FNNT ++ITD GN +AW SP GF GSRK++PFAAQ+A
Sbjct: 24 KIKKGKKRIDIQGIACVFASFNNTIVSITDARGNVVAWGSPGNSGFKGSRKSTPFAAQLA 83
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ + KA + GM ++V+V G G GR+SA+RAL+ G ++SI DVT I HNGCRP+K+
Sbjct: 84 AETAAHKAFDLGMRKVDVRVKGAGGGRESAVRALKNAGLEVLSIRDVTGIPHNGCRPKKK 143
Query: 127 RRI 129
RRI
Sbjct: 144 RRI 146
>gi|197131622|gb|ACH47329.1| ribosomal protein S11 [Erodium chrysanthum]
Length = 141
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 72/128 (56%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+P++ + + I G HV ++F+NT +TITD G + WSS V F G R+ +P
Sbjct: 13 LPRNSRTRLRKNIRKITKGIIHVQASFSNTIVTITDVGGRVVTWSSAGVCKFKGRRRGTP 72
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQ T D GM V + G+G GRD+ALRA+ G + I D+T I HNG
Sbjct: 73 FAAQSTTQDALKPLVKQGMRRAIVLIKGIGRGRDAALRAICKSGVRLHLIRDITPIPHNG 132
Query: 121 CRPRKRRR 128
CRP K+RR
Sbjct: 133 CRPPKKRR 140
>gi|255038114|ref|YP_003088735.1| 30S ribosomal protein S11 [Dyadobacter fermentans DSM 18053]
gi|254950870|gb|ACT95570.1| ribosomal protein S11 [Dyadobacter fermentans DSM 18053]
Length = 131
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 78/127 (61%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K + + R G+ H+ ++FNN I+IT+ +G I+W S +GF GS+KN+P+A
Sbjct: 5 KRKDKAKKRVVVVEPVGQVHIKASFNNIIISITNSNGQVISWGSAGKMGFRGSKKNTPYA 64
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + A + GM EV V G G+GR+SA+R ++ G + +I D+T + HNGCR
Sbjct: 65 AQTAAQSAAQVAFDLGMRKAEVFVKGPGSGRESAIRTIQNAGIEVTTIRDITPLPHNGCR 124
Query: 123 PRKRRRI 129
P KRRR+
Sbjct: 125 PPKRRRV 131
>gi|108885090|ref|NP_072839.2| 30S ribosomal protein S11 [Mycoplasma genitalium G37]
gi|255660325|ref|ZP_05405734.1| 30S ribosomal protein S11 [Mycoplasma genitalium G37]
gi|84626153|gb|AAC71395.2| ribosomal protein S11 [Mycoplasma genitalium G37]
gi|166078907|gb|ABY79525.1| ribosomal protein S11 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 121
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 72/119 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ N+ SG HV + NNT ++ TDP GN + W+S VGF G RK +P++A VA D
Sbjct: 3 KKKKINVPSGLIHVSCSPNNTIVSATDPSGNVLCWASSGTVGFKGFRKKTPYSAGVAADK 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + GM S+++ + G G G+D+ +R+ G TI I + T I HNGC+P KR R
Sbjct: 63 VAKTVKEMGMGSVKMYLKGTGRGKDTTIRSFANAGITITEINEKTPIPHNGCKPPKRPR 121
>gi|197131628|gb|ACH47332.1| ribosomal protein S11 [Geranium macrorrhizum]
Length = 141
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 1 MPKSPSRIRN------------RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPK 48
M K R N + + I G HV ++F+NT +TITD G + W+S
Sbjct: 1 MAKPIRRYSNYSLRRNRRIRLRKNIRKIQKGIIHVQASFSNTIVTITDVEGRVVTWASAG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIV 108
GF G R+ +PFAAQ T + N GM + V G+G GRD+ALR + G +
Sbjct: 61 ACGFKGKRRGTPFAAQTTTKNAIQPLVNQGMQRANILVKGVGRGRDAALRTIGRSGVRLK 120
Query: 109 SICDVTMIAHNGCRPRKRRR 128
I D+T I HNGCRP K+RR
Sbjct: 121 LIRDITPIPHNGCRPPKKRR 140
>gi|14278540|pdb|1I94|K Chain K, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278561|pdb|1I95|K Chain K, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278582|pdb|1I96|K Chain K, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278604|pdb|1I97|K Chain K, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241285|pdb|2E5L|K Chain K, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887639|pdb|2ZM6|K Chain K, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 128
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 84/115 (73%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + SGRA++ +++NNT +TITDP GN I WSS V+G+ GSRK +P+AAQ+A D + K
Sbjct: 11 RQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKK 70
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A +GM S++V V G GAGR+ A+RAL+A G + SI D T + HNGCRP+K+ R
Sbjct: 71 AMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR 125
>gi|197131636|gb|ACH47336.1| ribosomal protein S11 [Pelargonium cotyledonis]
Length = 138
Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 67/115 (58%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ I G HV ++FNNT +T+TD G + +S GF G R+ +PFAAQ T++
Sbjct: 23 RKIPKGIIHVQASFNNTIVTVTDVGGRVVTSASAGACGFKGRRRGTPFAAQTTTENAIRT 82
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ GM V V G+G GRD+ALRA+ G + + D T + HNGCRP K+RR
Sbjct: 83 VVDQGMHRAVVLVKGVGRGRDAALRAIFRSGVRLHFLRDRTPLPHNGCRPPKKRR 137
>gi|11466522|ref|NP_044771.1| ribosomal protein S11 [Reclinomonas americana]
gi|2258352|gb|AAD11886.1| ribosomal protein S11 [Reclinomonas americana]
Length = 129
Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 79/129 (61%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + ++ NI G HV ++F NT +TITD GNTI+W+S GF G+R+++
Sbjct: 1 MIKELKKDSKKDNNNIFYGHVHVKASFTNTIVTITDCMGNTISWASSGSSGFKGARRSTS 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AAQ A ++ KA HG+ S+++ GLG GR S + L + G I + D+T I HNG
Sbjct: 61 YAAQAAAENAGKKAIEHGIRSVKLITRGLGPGRLSCTKGLLSAGLKISLVGDLTPIPHNG 120
Query: 121 CRPRKRRRI 129
CR +K+RR+
Sbjct: 121 CRAKKKRRV 129
>gi|46199604|ref|YP_005271.1| 30S ribosomal protein S11 [Thermus thermophilus HB27]
gi|55981635|ref|YP_144932.1| 30S ribosomal protein S11 [Thermus thermophilus HB8]
gi|24212668|sp|P80376|RS11_THET8 RecName: Full=30S ribosomal protein S11
gi|50401367|sp|P62654|RS11_THET2 RecName: Full=30S ribosomal protein S11
gi|7440333|pir||JE0400 ribosomal protein S11 - Thermus aquaticus
gi|10835595|pdb|1FJG|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096404|pdb|1HR0|K Chain K, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399802|pdb|1HNW|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399824|pdb|1HNX|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399846|pdb|1HNZ|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278020|pdb|1GIX|N Chain N, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278066|pdb|1IBK|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278087|pdb|1IBL|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278111|pdb|1IBM|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826130|pdb|1JGO|N Chain N, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826155|pdb|1JGP|N Chain N, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826180|pdb|1JGQ|N Chain N, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|20663896|pdb|1J5E|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065886|pdb|1N32|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065913|pdb|1N33|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065940|pdb|1N34|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065966|pdb|1N36|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna Anticodon
Stem-Loop Mismatched At The Second Codon Position
gi|28373709|pdb|1ML5|N Chain N, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177410|pdb|1XMO|K Chain K, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177433|pdb|1XMQ|K Chain K, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177474|pdb|1XNQ|K Chain K, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177497|pdb|1XNR|K Chain K, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361064|pdb|1YL4|N Chain N, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192246|pdb|2B64|K Chain K, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192309|pdb|2B9M|K Chain K, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192365|pdb|2B9O|K Chain K, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591333|pdb|2F4V|K Chain K, 30s Ribosome + Designer Antibiotic
gi|116667664|pdb|2HHH|K Chain K, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668207|pdb|2J00|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668268|pdb|2J02|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389722|pdb|2HGI|N Chain N, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389779|pdb|2HGP|N Chain N, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389835|pdb|2HGR|N Chain N, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242718|pdb|2OW8|LL Chain l, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243628|pdb|2UU9|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243655|pdb|2UUA|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243682|pdb|2UUB|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243709|pdb|2UUC|K Chain K, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243848|pdb|2UXC|K Chain K, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836418|pdb|2UXB|K Chain K, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836495|pdb|2V46|K Chain K, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836551|pdb|2V48|K Chain K, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430910|pdb|2UXD|K Chain K, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285949|pdb|2QNH|LL Chain l, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972859|pdb|2VQE|K Chain K, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972882|pdb|2VQF|K Chain K, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156506|pdb|3D5A|K Chain K, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156562|pdb|3D5C|K Chain K, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938829|pdb|2JL5|K Chain K, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
Contains The 30s Subunit.
gi|211938887|pdb|2JL7|K Chain K, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
Contains The 30s Subunit.
gi|218766783|pdb|3F1E|K Chain K, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766839|pdb|3F1G|K Chain K, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887384|pdb|2WDG|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887409|pdb|2WDH|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887498|pdb|2WDK|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887555|pdb|2WDM|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823539|pdb|2WH1|K Chain K, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823598|pdb|2WH3|K Chain K, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260099996|pdb|3HUW|K Chain K, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100052|pdb|3HUY|K Chain K, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824494|pdb|2WRI|K Chain K, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824556|pdb|2WRK|K Chain K, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824618|pdb|2WRN|K Chain K, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824677|pdb|2WRQ|K Chain K, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307177|pdb|3KIQ|KK Chain k, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307235|pdb|3KIS|KK Chain k, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307293|pdb|3KIU|KK Chain k, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307351|pdb|3KIX|KK Chain k, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965614|pdb|3KNH|K Chain K, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526692|pdb|3KNJ|K Chain K, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526717|pdb|3KNL|K Chain K, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526742|pdb|3KNN|K Chain K, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979514|pdb|3I8G|N Chain N, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979539|pdb|3I8H|N Chain N, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979598|pdb|3I9B|N Chain N, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979652|pdb|3I9D|N Chain N, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982085|pdb|2X9R|K Chain K, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982144|pdb|2X9T|K Chain K, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567972|pdb|2XFZ|K Chain K, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568030|pdb|2XG1|K Chain K, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776622|pdb|3OTO|K Chain K, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|309320245|pdb|3OGE|K Chain K, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320266|pdb|3OGY|K Chain K, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320347|pdb|3OHC|K Chain K, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320368|pdb|3OHD|K Chain K, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320449|pdb|3OHY|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320500|pdb|3OI0|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320551|pdb|3OI2|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320602|pdb|3OI4|K Chain K, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207683|pdb|2XQD|K Chain K, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754009|pdb|2XSY|K Chain K, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754124|pdb|2XUY|K Chain K, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533412|pdb|2Y0U|K Chain K, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533471|pdb|2Y0W|K Chain K, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533530|pdb|2Y0Y|K Chain K, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533589|pdb|2Y10|K Chain K, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533648|pdb|2Y12|K Chain K, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533707|pdb|2Y14|K Chain K, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533766|pdb|2Y16|K Chain K, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533825|pdb|2Y18|K Chain K, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|4519421|dbj|BAA75547.1| ribosomal protein S11 [Thermus thermophilus]
gi|46197230|gb|AAS81644.1| SSU ribosomal protein S11P [Thermus thermophilus HB27]
gi|55773048|dbj|BAD71489.1| 30S ribosomal protein S11 [Thermus thermophilus HB8]
Length = 129
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 60/115 (52%), Positives = 84/115 (73%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ + SGRA++ +++NNT +TITDP GN I WSS V+G+ GSRK +P+AAQ+A D + K
Sbjct: 12 RQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKK 71
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A +GM S++V V G GAGR+ A+RAL+A G + SI D T + HNGCRP+K+ R
Sbjct: 72 AMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR 126
>gi|26554441|ref|NP_758375.1| 30S ribosomal protein S11 [Mycoplasma penetrans HF-2]
gi|48474280|sp|P59372|RS11_MYCPE RecName: Full=30S ribosomal protein S11
gi|26454451|dbj|BAC44779.1| ribosomal protein S11 [Mycoplasma penetrans HF-2]
Length = 123
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + +++ + G +H+ ++ NNT +T+T+ G+ I WSS +G+ GS+K++P
Sbjct: 1 MAK-----KRKKKLSSPEGISHIHASANNTIVTLTNTGGDAITWSSSGSIGYKGSKKSTP 55
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA +A + + A + G+ + VKV+G G+G+D+A+R+L A G I I DVT I HNG
Sbjct: 56 YAAGIAAETAAKVAIDLGLKKVIVKVNGTGSGKDTAIRSLHAAGLEISEIHDVTPIPHNG 115
Query: 121 CRPRKRRR 128
CRP K+ R
Sbjct: 116 CRPPKKPR 123
>gi|254553697|gb|ACT67307.1| ribosomal protein S11 [Joinvillea plicata]
Length = 135
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT ITITD G + WSS GF SRK +P+A Q D
Sbjct: 19 RKSARRIPKGVIHVQASFNNTIITITDVRGRVVFWSSAGTCGFKSSRKATPYAGQTTAVD 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM EV V G G RD+ALRA+ G + I DVT + HNGCRP K+RR+
Sbjct: 79 AIRTV---GMQRAEVMVKGAGIARDAALRAIGKSGIRLNCIRDVTPMPHNGCRPPKKRRV 135
>gi|58584577|ref|YP_198150.1| 30S ribosomal protein S11 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75497933|sp|Q5GSW6|RS11_WOLTR RecName: Full=30S ribosomal protein S11
gi|58418893|gb|AAW70908.1| Ribosomal protein S11 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 128
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
R + K V+G H+ +TFNNT I +TD GNT+ +S GFSGSRK++P+AA
Sbjct: 2 KKVRTVGKSAKKFVTGVIHIRATFNNTFINVTDVQGNTLYQTSVGAHGFSGSRKSTPYAA 61
Query: 64 QVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A++ + A GM + V + G G G ++A++AL++ G T+ SI D T I+HNGCR
Sbjct: 62 GKASEVAAKTAIEKFGMKVVSVIIRGPGFGTEAAVKALQSCGLTVTSIADKTAISHNGCR 121
Query: 123 PRKRRRI 129
RK+RR+
Sbjct: 122 LRKKRRV 128
>gi|161349982|ref|NP_280039.2| 30S ribosomal protein S11P [Halobacterium sp. NRC-1]
gi|169235944|ref|YP_001689144.1| 30S ribosomal protein S11P [Halobacterium salinarum R1]
gi|47117775|sp|Q9HQJ5|RS11_HALSA RecName: Full=30S ribosomal protein S11P
gi|6172229|dbj|BAA85897.1| ribosomal protein HS11 [Halobacterium salinarum]
gi|167727010|emb|CAP13796.1| ribosomal protein S11 [Halobacterium salinarum R1]
Length = 127
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT +T+TD G T+A SS V + SP+AA + + + +
Sbjct: 7 WGIAHVHASFNNTIMTVTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVLD 66
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G+ + V+V G G G +A+RAL G I I DVT I H+G RP K
Sbjct: 67 QGIEKVHVRVRGPGGNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGTRPPK 123
>gi|197131626|gb|ACH47331.1| ribosomal protein S11 [Geranium carolinianum]
Length = 139
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 3 KSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
R R + + I G HV ++F+NT +TITD G + W+S GF G R+ +PF
Sbjct: 12 SRNRRTRLRKNIRKIRKGIIHVQASFSNTIVTITDVRGRVVVWASAGACGFKGRRRGTPF 71
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ T + GM V + G+G GRD+ALRA+ + I D+T + HNGC
Sbjct: 72 AAQTTTQNAIQPLVQQGMQLASVLIKGIGRGRDAALRAIFRSRVRVHLIRDITPMPHNGC 131
Query: 122 RPRKRRR 128
RP ++RR
Sbjct: 132 RPPQKRR 138
>gi|13507929|ref|NP_109878.1| 30S ribosomal protein S11 [Mycoplasma pneumoniae M129]
gi|2500438|sp|Q50296|RS11_MYCPN RecName: Full=30S ribosomal protein S11
gi|1215698|gb|AAC43691.1| RpsK [Mycoplasma pneumoniae]
gi|1674346|gb|AAB96289.1| ribosomal protein S11 [Mycoplasma pneumoniae M129]
gi|301633106|gb|ADK86660.1| 30S ribosomal protein S11 [Mycoplasma pneumoniae FH]
Length = 121
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 75/119 (63%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ N+ SG HV + NNT ++ +DP GN + W+S +GF GSRK +P++A +A D
Sbjct: 3 KKKKINVSSGIIHVSCSPNNTIVSASDPGGNVLCWASSGTMGFKGSRKKTPYSAGIAADK 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + GM+++++ V G G G+D+A+R+ G +I I + T I HNGC+P KR R
Sbjct: 63 VAKTVKEMGMATVKLFVKGTGRGKDTAIRSFANAGLSITEINEKTPIPHNGCKPPKRPR 121
>gi|110225646|ref|YP_665652.1| ribosomal protein S11 [Nephroselmis olivacea]
gi|6066161|gb|AAF03179.1|AF110138_11 ribosomal protein S11 [Nephroselmis olivacea]
Length = 128
Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats.
Identities = 52/111 (46%), Positives = 69/111 (62%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G +V ST NNT +T+TD G AWSS VGF G+R+ + FAAQ A + + K+ G
Sbjct: 18 GIIYVQSTKNNTILTLTDSVGAAKAWSSAGSVGFKGARRATGFAAQTAAETLAKKSSRLG 77
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++VK+ GLG GR S+LR L+ G I I D+T + HNGCR K+RRI
Sbjct: 78 FFHIDVKLKGLGNGRRSSLRGLKLGGLKIRKIQDITPLPHNGCRQPKQRRI 128
>gi|297567258|ref|YP_003686230.1| 30S ribosomal protein S11 [Meiothermus silvanus DSM 9946]
gi|296851707|gb|ADH64722.1| 30S ribosomal protein S11 [Meiothermus silvanus DSM 9946]
Length = 132
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 83/114 (72%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
+ GRA + +++NNT +TITDP GN + WSS V+G+ GSRK +P+AAQ+A D + KA
Sbjct: 16 QVSGGRAFIHASYNNTIVTITDPDGNPVTWSSGGVIGYKGSRKGTPYAAQLAAMDAAKKA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
QN GM+S+EV V G GAGR+ A+RAL+A G + SI D T + HNGCRPRK+ R
Sbjct: 76 QNFGMTSVEVVVRGTGAGREQAIRALQASGLQVRSIVDDTPVPHNGCRPRKKFR 129
>gi|226356867|ref|YP_002786607.1| 30S ribosomal protein S11 [Deinococcus deserti VCD115]
gi|259494619|sp|C1CXD6|RS11_DEIDV RecName: Full=30S ribosomal protein S11
gi|226318857|gb|ACO46853.1| putative 30S ribosomal protein S11 [Deinococcus deserti VCD115]
Length = 131
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R R+NI +GRA+V +++NNT +TITD GN++AWSS +G+ GS+K +
Sbjct: 1 MAKPTKGKAPRRARRNISAGRAYVHASYNNTIVTITDLDGNSVAWSSGGTIGYKGSKKGT 60
Query: 60 PFAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
P+AAQ+A D KAQ GM+ ++V V G G+GR+ A+RA++A G + SI D T + H
Sbjct: 61 PYAAQLAAADAVKKAQQTFGMNIVDVIVRGSGSGREQAIRAIQASGIEVKSIMDDTPVPH 120
Query: 119 NGCRPRKRRR 128
NGCRP+K+ R
Sbjct: 121 NGCRPKKKFR 130
>gi|319789264|ref|YP_004150897.1| 30S ribosomal protein S11 [Thermovibrio ammonificans HB-1]
gi|317113766|gb|ADU96256.1| 30S ribosomal protein S11 [Thermovibrio ammonificans HB-1]
Length = 129
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ AH+ ++FNNT IT TD GNT+ W S VGF G+RK++P+AAQ+A + +A
Sbjct: 15 VGFAIAHIQTSFNNTIITFTDKEGNTLCWESGGTVGFKGTRKSTPYAAQLAATKAAQRAM 74
Query: 76 -NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +E+++ G G GR++A++A+ A G + I DVT I H+GCRP KRRR+
Sbjct: 75 KEFGVKDVEIRIKGNGGGRETAIKAIAAAGLNVKVIRDVTPIPHDGCRPPKRRRV 129
>gi|325282666|ref|YP_004255207.1| 30S ribosomal protein S11 [Deinococcus proteolyticus MRP]
gi|324314475|gb|ADY25590.1| 30S ribosomal protein S11 [Deinococcus proteolyticus MRP]
Length = 131
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ R R R++I +GRA+V +++NNT +TITD GN++AWSS +G+ GS+K +
Sbjct: 1 MAKTTKGRAPRRSRRSIAAGRAYVHASYNNTIVTITDQDGNSVAWSSGGTIGYKGSKKGT 60
Query: 60 PFAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
P+AAQ+A D KAQ GM+S++V V G G+GR+ A+RA++A G + SI D T + H
Sbjct: 61 PYAAQLAAADAVKKAQQSFGMNSVDVIVRGSGSGREQAIRAIQASGIEVRSIMDDTPVPH 120
Query: 119 NGCRPRKRRR 128
NGCRP+K+ R
Sbjct: 121 NGCRPKKKFR 130
>gi|324544652|gb|ADY49686.1| 30S ribosomal protein S11 [Ascaris suum]
Length = 126
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 67/110 (60%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ SG AH+ S +NNT I ITD GNT+AWSS GF G +K++PFAAQ A + Q
Sbjct: 14 VESGIAHIHSNWNNTIINITDLDGNTLAWSSSGCAGFKGGKKSTPFAAQQAANKVIESIQ 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
GM + V+ G G GRD+ ++ ++ G + SI + T I HNGCRP K
Sbjct: 74 AMGMKKVRVETKGSGPGRDTTIKTIKGAGIEVTSILNKTPIPHNGCRPPK 123
>gi|190571568|ref|YP_001975926.1| ribosomal protein S11 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018970|ref|ZP_03334777.1| ribosomal protein S11 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226708433|sp|B3CN48|RS11_WOLPP RecName: Full=30S ribosomal protein S11
gi|190357840|emb|CAQ55296.1| ribosomal protein S11 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995079|gb|EEB55720.1| ribosomal protein S11 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 128
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + K ++G H+ +TFNNT + +TD GNT+ +S GFSGSRK++P+AA
Sbjct: 2 KKVKTVGKNTKRFITGIVHIRATFNNTFVNVTDVCGNTLYQTSVGACGFSGSRKSTPYAA 61
Query: 64 QVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
D + K GM + V + G G G ++A++ALR G T+ SI D T I HNGCR
Sbjct: 62 GKVADSAAKKVIERFGMKVVSVIIRGPGFGAEAAVKALRNCGLTVTSIADKTAIPHNGCR 121
Query: 123 PRKRRRI 129
RK+RR+
Sbjct: 122 LRKKRRV 128
>gi|116008989|gb|ABJ52163.1| ribosomal protein S11 [Phyllostachys edulis]
Length = 134
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT IT+TDP G + WSS GF SRK SP+A Q D
Sbjct: 22 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVD 81
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G+ EV V G G+GRD+ALRA+ G + I DVT + HNGCRP K
Sbjct: 82 AIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPK 134
>gi|307257881|ref|ZP_07539637.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306863611|gb|EFM95538.1| 30S ribosomal protein S11 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 98
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/98 (54%), Positives = 69/98 (70%)
Query: 32 ITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA 91
+TITD GN +AW++ GF GSRK++PFAAQVA + C+ + G+ +LEV V G G
Sbjct: 1 MTITDRQGNALAWATAGGSGFRGSRKSTPFAAQVAAERCAEAVKEFGLKNLEVMVKGPGP 60
Query: 92 GRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 61 GRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 98
>gi|15829033|ref|NP_326393.1| 30S ribosomal protein S11 [Mycoplasma pulmonis UAB CTIP]
gi|48474941|sp|Q98Q07|RS11_MYCPU RecName: Full=30S ribosomal protein S11
gi|14089977|emb|CAC13735.1| 30S RIBOSOMAL PROTEIN S11 [Mycoplasma pulmonis]
Length = 136
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 79/124 (63%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+S + +RKN+ +G AH+ ST NNT +T +D GN I+W+S +G+ G++K + +A
Sbjct: 5 RSSQTTKKVKRKNVTNGVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTAYA 64
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A +A + S KA+ HG+ + V+V G+G GRD+A + + G ++ I DVT AHNG R
Sbjct: 65 AGLAAQNASEKAKEHGIREVSVRVKGIGQGRDAARKQIEVSGISVSQIVDVTPQAHNGTR 124
Query: 123 PRKR 126
P KR
Sbjct: 125 PPKR 128
>gi|115531951|ref|YP_784106.1| ribosomal protein S11 [Pelargonium x hortorum]
gi|115531995|ref|YP_784150.1| ribosomal protein S11 [Pelargonium x hortorum]
gi|122164247|sp|Q06FN1|RR11_PELHO RecName: Full=30S ribosomal protein S11, chloroplastic
gi|112382105|gb|ABI17298.1| ribosomal protein S11 [Pelargonium x hortorum]
gi|112382149|gb|ABI17342.1| ribosomal protein S11 [Pelargonium x hortorum]
Length = 140
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 1 MPKSPSR-----------IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV 49
M K+ R + + I G HV ++F+NT +T+TD G + +S
Sbjct: 1 MAKTIRRYSSFRLRNRRIRSRKSARKIPKGIIHVQASFSNTIVTVTDVGGRVVTSASAGA 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
GF G R+ +PFAAQ ++ GM V V G+G GRD+ALRA+ G +
Sbjct: 61 CGFKGRRRGTPFAAQTTAENAIRTVVTQGMHRAVVLVKGVGRGRDAALRAILRSGVRLHL 120
Query: 110 ICDVTMIAHNGCRPRKRRR 128
+ D T + HNGCRP KRRR
Sbjct: 121 LRDRTPLPHNGCRPPKRRR 139
>gi|149390386|ref|YP_001294385.1| ribosomal protein S11 [Dioscorea elephantipes]
gi|172048700|sp|A6MMP0|RR11_DIOEL RecName: Full=30S ribosomal protein S11, chloroplastic
gi|148668078|gb|ABR01462.1| ribosomal protein S11 [Dioscorea elephantipes]
Length = 138
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 72/120 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + I G HV ++FNNT +T++D G I+W+S GF G+R+ +P+AAQ A +
Sbjct: 19 RKNARRIPKGVIHVQASFNNTIVTVSDVRGQVISWASAGTSGFKGTRRGTPYAAQAAAVN 78
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ M EV + G G GRD+ALRA+R G + + DVT + HNGCRP ++RR+
Sbjct: 79 AIRTIIDQDMQRAEVMIKGAGFGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPQKRRV 138
>gi|94985942|ref|YP_605306.1| 30S ribosomal protein S11 [Deinococcus geothermalis DSM 11300]
gi|122986554|sp|Q1IX97|RS11_DEIGD RecName: Full=30S ribosomal protein S11
gi|94556223|gb|ABF46137.1| ribosomal protein S11 [Deinococcus geothermalis DSM 11300]
Length = 131
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K+ + R R+NI +GRA+V +++NNT +TITD GN++AWSS +G+ GS+K +
Sbjct: 1 MAKTTKGKTPRRARRNISAGRAYVHASYNNTIVTITDLDGNSVAWSSGGTIGYKGSKKGT 60
Query: 60 PFAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
P+AAQ+A D KAQ GM+ ++V V G G+GR+ A+RA++A G + SI D + + H
Sbjct: 61 PYAAQLAAADAVKKAQQAFGMNVVDVIVRGTGSGREQAIRAIQASGIEVKSIMDDSPVPH 120
Query: 119 NGCRPRKRRR 128
NGCRP+K+ R
Sbjct: 121 NGCRPKKKFR 130
>gi|157828837|ref|YP_001495079.1| 30S ribosomal protein S11 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933564|ref|YP_001650353.1| 30S ribosomal protein S11 [Rickettsia rickettsii str. Iowa]
gi|166231830|sp|A8GT46|RS11_RICRS RecName: Full=30S ribosomal protein S11
gi|189040429|sp|B0BUN7|RS11_RICRO RecName: Full=30S ribosomal protein S11
gi|157801318|gb|ABV76571.1| 30S ribosomal protein S11 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908651|gb|ABY72947.1| SSU ribosomal protein S11P [Rickettsia rickettsii str. Iowa]
Length = 127
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 77/114 (67%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D S KA+
Sbjct: 14 ITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTVDRASEKAK 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 74 EYGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|170784738|ref|YP_001718654.1| ribosomal protein S11 [Trachelium caeruleum]
gi|156598818|gb|ABU85662.1| ribosomal protein S11 [Trachelium caeruleum]
gi|157267486|gb|ABV26479.1| ribosomal protein S11 [Trachelium caeruleum]
Length = 133
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
GR HV + FNN +T+TDP G ++ SS G G RK +PFA + + +
Sbjct: 24 PKGRIHVQAGFNNIIVTVTDPQGRVLSSSSAGNCGLRGKRKGTPFAGEAVAANALSSVV- 82
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
M EV + G G GRD+ALRA+ I I DVT + HNGCRP K+RR+
Sbjct: 83 --MKRAEVMIKGPGLGRDTALRAIARSRIRITLIRDVTPLPHNGCRPPKKRRV 133
>gi|327283735|ref|XP_003226596.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like [Anolis
carolinensis]
Length = 183
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 69/128 (53%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +T+NNT I + P +A S+ GF ++K +
Sbjct: 56 PGRESSLRWAGKKFEEIPIAHIKATYNNTHIQVLSPERVPLALSTCGTEGFKNAKKATAI 115
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ + KA G+S + V V GLG GR +A++ L G ++SI D T I HNGC
Sbjct: 116 AAQTTGIAAATKACAKGVSHVRVVVKGLGPGRMAAIKGLTMGGLEVISITDNTPIPHNGC 175
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 176 RPRKVRRL 183
>gi|67458693|ref|YP_246317.1| 30S ribosomal protein S11 [Rickettsia felis URRWXCal2]
gi|238650949|ref|YP_002916805.1| 30S ribosomal protein S11 [Rickettsia peacockii str. Rustic]
gi|239948296|ref|ZP_04700049.1| 30S ribosomal protein S11 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|75536845|sp|Q4UMQ6|RS11_RICFE RecName: Full=30S ribosomal protein S11
gi|259494634|sp|C4K2F6|RS11_RICPU RecName: Full=30S ribosomal protein S11
gi|67004226|gb|AAY61152.1| 30S ribosomal protein S11 [Rickettsia felis URRWXCal2]
gi|238625047|gb|ACR47753.1| 30S ribosomal protein S11 [Rickettsia peacockii str. Rustic]
gi|239922572|gb|EER22596.1| 30S ribosomal protein S11 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 127
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 77/114 (67%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D S KA+
Sbjct: 14 ITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTIDRASEKAK 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 74 EYGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|157964783|ref|YP_001499607.1| 30S ribosomal protein S11 [Rickettsia massiliae MTU5]
gi|172045666|sp|A8F2C4|RS11_RICM5 RecName: Full=30S ribosomal protein S11
gi|157844559|gb|ABV85060.1| 30S ribosomal protein S11 [Rickettsia massiliae MTU5]
Length = 128
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 77/114 (67%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D S KA+
Sbjct: 15 ITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTIDRASEKAK 74
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 75 EYGLKTISIRIGGPGAQRESAMRALFGQNFVVTSIVDVSSIAHNGVRPPKRRRV 128
>gi|321226468|gb|EFX51518.1| SSU ribosomal protein S11p S14e [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
Length = 98
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 52/98 (53%), Positives = 69/98 (70%)
Query: 32 ITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA 91
+TITD GN + W++ GF GSRK++PFAAQVA + C+ + +G+ +LEV V G G
Sbjct: 1 MTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGP 60
Query: 92 GRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 61 GRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 98
>gi|157804012|ref|YP_001492561.1| 30S ribosomal protein S11 [Rickettsia canadensis str. McKiel]
gi|166231829|sp|A8EZJ3|RS11_RICCK RecName: Full=30S ribosomal protein S11
gi|157785275|gb|ABV73776.1| 30S ribosomal protein S11 [Rickettsia canadensis str. McKiel]
Length = 127
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 76/111 (68%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D S KA+ +G
Sbjct: 17 GVVHIRASFNNTIVTFTDIQGNTISSASAGSNGFKGARKATPYAAQVTIDRASEKAKEYG 76
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 77 LKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|15892906|ref|NP_360620.1| 30S ribosomal protein S11 [Rickettsia conorii str. Malish 7]
gi|34581392|ref|ZP_00142872.1| 30S ribosomal protein S11 [Rickettsia sibirica 246]
gi|229586986|ref|YP_002845487.1| 30S ribosomal protein S11 [Rickettsia africae ESF-5]
gi|48474589|sp|Q92GY9|RS11_RICCN RecName: Full=30S ribosomal protein S11
gi|259494633|sp|C3PP84|RS11_RICAE RecName: Full=30S ribosomal protein S11
gi|15620097|gb|AAL03521.1| 30S ribosomal protein S11 [Rickettsia conorii str. Malish 7]
gi|28262777|gb|EAA26281.1| 30S ribosomal protein S11 [Rickettsia sibirica 246]
gi|228022036|gb|ACP53744.1| 30S ribosomal protein S11 [Rickettsia africae ESF-5]
Length = 127
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 56/114 (49%), Positives = 77/114 (67%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GNTIA +S GF G+RK +P+AAQV D S KA+
Sbjct: 14 ITLGVVHIRASFNNTIVTFTDIQGNTIASASAGGNGFKGARKATPYAAQVTIDRASEKAK 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 74 EYGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|22550354|ref|NP_689355.1| ribosomal protein S11 [Chaetosphaeridium globosum]
gi|22417020|gb|AAM96619.1|AF494279_24 ribosomal protein S11 [Chaetosphaeridium globosum]
Length = 116
Score = 129 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 75/112 (66%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+G A++ ST NNT ITITD G+ W S VGF GS++++ +AAQ + +A A+ H
Sbjct: 5 NGIAYIQSTLNNTIITITDSKGHIKVWCSSGCVGFKGSKRSTNYAAQATAEKAAASAKKH 64
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++V++ GLG G+DS+LR L+ G I + DVT I HNGCRP K+RR+
Sbjct: 65 GIKFVKVRIKGLGYGKDSSLRGLQIAGLKITHLWDVTPIPHNGCRPPKKRRV 116
>gi|167945794|ref|ZP_02532868.1| 30S ribosomal protein S11 [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 112
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 70/109 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+ R R + +K + G AHV ++FNNT ITITD GN +AW++ GF GSRK++P
Sbjct: 2 MAKASGRSRKKVKKTVSDGVAHVHASFNNTIITITDRQGNALAWATAGGSGFRGSRKSTP 61
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
FAAQVA D + +G+ +L+V V G G GR+SA+RAL GF I
Sbjct: 62 FAAQVAADRVGQMVKEYGVKNLDVNVKGPGPGRESAVRALNNAGFKITR 110
>gi|94317204|gb|ABF14780.1| Rps11 [Pelargonium x hortorum]
Length = 140
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 1 MPKSPSR-----------IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV 49
M K+ R + + I G HV ++F+NT +T+TD G + ++ +
Sbjct: 1 MAKTIRRYSSFRLRNRRIRSRKSARKIPKGIIHVQASFSNTIVTVTDVGGRVVTSAAARA 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
GF G R+ +PFAAQ ++ GM V V G+G GRD+ALRA+ G +
Sbjct: 61 CGFKGRRRGTPFAAQTTAENAIRTVVTQGMHRAVVLVKGVGRGRDAALRAILRSGVRLHL 120
Query: 110 ICDVTMIAHNGCRPRKRRR 128
+ D T + HNGCRP KRRR
Sbjct: 121 LRDRTPLPHNGCRPPKRRR 139
>gi|115391933|ref|YP_778522.1| ribosomal protein S11 [Jasminum nudiflorum]
gi|122164941|sp|Q06R99|RR11_JASNU RecName: Full=30S ribosomal protein S11, chloroplastic
gi|110456254|gb|ABG74659.1| ribosomal protein S11 [Jasminum nudiflorum]
Length = 146
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 68/118 (57%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+ + I G H+ ++F+NT +T+TD G ++WSS F G RK +PFAAQ+ D
Sbjct: 28 KSVRKIPRGVIHIQTSFHNTIVTVTDGRGQVVSWSSAGTCRFKGPRKRTPFAAQIVAADA 87
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ G+ ++K+ G G GRD+ALR + G S+ DVT + HNGCRP ++R
Sbjct: 88 IGPVVDQGLQRAKIKLKGTGRGRDAALRTISKSGIGFTSVQDVTPVPHNGCRPPNKKR 145
>gi|269123123|ref|YP_003305700.1| 30S ribosomal protein S11 [Streptobacillus moniliformis DSM 12112]
gi|268314449|gb|ACZ00823.1| ribosomal protein S11 [Streptobacillus moniliformis DSM 12112]
Length = 127
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 75/113 (66%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI SG A++ STFNNT +TITD G + W S GF G++K +PFAAQ+A + + A
Sbjct: 14 NIPSGIAYIHSTFNNTVVTITDSEGKVVIWKSGGTSGFKGTKKGTPFAAQIAAEQAAQVA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+GM +E+K+ G G+GR++++R+++A + I D+T + HNG RP K++
Sbjct: 74 IENGMKKIEIKIKGPGSGREASIRSIQATELEVTRIVDITPVPHNGARPPKKK 126
>gi|15807120|ref|NP_295849.1| 30S ribosomal protein S11 [Deinococcus radiodurans R1]
gi|41019253|sp|Q9RSJ8|RS11_DEIRA RecName: Full=30S ribosomal protein S11
gi|6459924|gb|AAF11676.1|AE002047_9 ribosomal protein S11 [Deinococcus radiodurans R1]
Length = 131
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 1 MPKSPS-RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R R+NI +GRA+V +++NNT +TITD GN++AWSS +G+ GS+K +
Sbjct: 1 MAKPTKGKAPRRSRRNISAGRAYVHASYNNTIVTITDLDGNSVAWSSGGTIGYKGSKKGT 60
Query: 60 PFAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
P+AAQ+A D KAQ + GM++++V V G G+GR+ A+RA++A G + SI D + + H
Sbjct: 61 PYAAQLAAADAVKKAQTSFGMAAVDVIVRGSGSGREQAIRAIQASGIEVRSIMDDSPVPH 120
Query: 119 NGCRPRKRRR 128
NGCRP+K+ R
Sbjct: 121 NGCRPKKKFR 130
>gi|157826040|ref|YP_001493760.1| 30S ribosomal protein S11 [Rickettsia akari str. Hartford]
gi|166231827|sp|A8GPC7|RS11_RICAH RecName: Full=30S ribosomal protein S11
gi|157799998|gb|ABV75252.1| 30S ribosomal protein S11 [Rickettsia akari str. Hartford]
Length = 127
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/114 (50%), Positives = 78/114 (68%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D SAKA+
Sbjct: 14 ITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTIDRASAKAK 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 74 EHGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|15604482|ref|NP_221000.1| 30S ribosomal protein S11 [Rickettsia prowazekii str. Madrid E]
gi|51473816|ref|YP_067573.1| 30S ribosomal protein S11 [Rickettsia typhi str. Wilmington]
gi|6226056|sp|Q9ZCS8|RS11_RICPR RecName: Full=30S ribosomal protein S11
gi|81390001|sp|Q68WA1|RS11_RICTY RecName: Full=30S ribosomal protein S11
gi|3861176|emb|CAA15076.1| 30S RIBOSOMAL PROTEIN S11 (rpsK) [Rickettsia prowazekii]
gi|51460128|gb|AAU04091.1| 30S ribosomal protein S11 [Rickettsia typhi str. Wilmington]
gi|292572264|gb|ADE30179.1| 30S ribosomal protein S11 [Rickettsia prowazekii Rp22]
Length = 127
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 75/111 (67%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G H+ ++FNNT +T TD GNTI+ +S GF G+RK +P+AAQV D S KA+ G
Sbjct: 17 GVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTIDKASEKAKECG 76
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG RP KRRR+
Sbjct: 77 LKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV 127
>gi|115443570|ref|YP_778589.1| 30S ribosomal protein S11 [Bigelowiella natans]
gi|122239922|sp|Q06J38|RR11_BIGNA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|110810215|gb|ABG91421.1| 30S ribosomal protein S11 [Bigelowiella natans]
Length = 130
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ + + G ++ +T NNT ITI D G ++WSS + GF G+RK S
Sbjct: 1 MVKQIRKLTIKKAKWKASDGIVYIYATLNNTIITIVDTSGRVVSWSSAGICGFRGARKAS 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
PFAA+ A + + + N G++ +V V GLG GR +++R L+ G I I D+T HN
Sbjct: 61 PFAAKTAAEYAARQCINKGINRAQVLVKGLGTGRHTSIRGLQDAGLKISLIRDITTTPHN 120
Query: 120 GCRPRKRRRI 129
GCR KRRR+
Sbjct: 121 GCRQPKRRRV 130
>gi|124359630|gb|ABD32301.2| Ribosomal protein S11 [Medicago truncatula]
Length = 125
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K R R I G +V ++FNNT +T+T+ G I+WSS GF G+R+ +PF
Sbjct: 7 AKKLRRPRK-----IPKGVIYVQASFNNTIVTVTNVRGRAISWSSAGSCGFKGTRRGTPF 61
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + A + GM V + G G GRD+ALRA+ G + I DVT I HNGC
Sbjct: 62 AAQTAAANAIRTAVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGC 121
Query: 122 R 122
R
Sbjct: 122 R 122
>gi|47459095|ref|YP_015957.1| 30S ribosomal protein S11 [Mycoplasma mobile 163K]
gi|81614320|sp|Q6KI30|RS11_MYCMO RecName: Full=30S ribosomal protein S11
gi|47458424|gb|AAT27746.1| 30S ribosomal protein s11 [Mycoplasma mobile 163K]
Length = 134
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/114 (44%), Positives = 74/114 (64%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
RKNIVSG AH+ ST NT + +D GN AWSS +G+ G++K +P+AA +AT
Sbjct: 14 RKNIVSGVAHIHSTHQNTIVAFSDEAGNVFAWSSAGAIGYKGTKKKTPYAAGLATTAAVE 73
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
KA+ HG+ + V++ G G+G+D+A + + A+G I + DVT I HNG RP K+
Sbjct: 74 KAKEHGLKEVRVELKGTGSGKDAARKQIEALGIIIKEVKDVTPIPHNGTRPPKK 127
>gi|91208879|ref|YP_539040.1| ribosomal protein S11 [Physcomitrella patens]
gi|90991419|dbj|BAE93111.1| ribosomal protein S11 [Physcomitrella patens]
gi|328775217|gb|AEB40004.1| ribosomal protein S11 [Funaria hygrometrica]
Length = 118
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+K G A++ ST +NT IT+TD G+T WSS +GF GSR+++ +AAQ ++ +
Sbjct: 2 QKKKKHGIAYIRSTLSNTIITVTDYKGDTKTWSSSGSLGFKGSRRSTNYAAQATAENAAR 61
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A G+ S+EV++ GLG G++S+LR LR G I I DVT HNGCRP K+RR+
Sbjct: 62 TAIQLGIKSVEVEIKGLGYGKESSLRGLRLGGLIITKIRDVTPTPHNGCRPPKKRRV 118
>gi|300711112|ref|YP_003736926.1| 30S ribosomal protein S11P [Halalkalicoccus jeotgali B3]
gi|299124795|gb|ADJ15134.1| 30S ribosomal protein S11P [Halalkalicoccus jeotgali B3]
Length = 129
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT ITITD G TIA SS V + SP+AA + + + +
Sbjct: 9 WGVAHVHASFNNTVITITDQTGAETIAKSSGGTVVKQNRDEASPYAAMQMAETVAQEVLD 68
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G+ + V+V G G G + +RAL G I I DVT I H+GCR K
Sbjct: 69 AGIEGVHVRVRGPGGNRQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGCRAPK 125
>gi|321310955|ref|YP_004193284.1| 30S ribosomal protein S11 [Mycoplasma haemofelis str. Langford 1]
gi|319802799|emb|CBY93445.1| ribosomal protein S11 [Mycoplasma haemofelis str. Langford 1]
Length = 126
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
SG AH+ +T NNT ITITD G + S + F G++K +P A + + AQN
Sbjct: 16 SGIAHITATLNNTLITITDEEGKCVLQESAGTLSFKGTKKATPHVANLVANKIGKNAQNL 75
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ +L +KV G+G G++ A++AL + GFTI I DVT + HNGC+P K+ R
Sbjct: 76 GLQNLIIKVKGIGRGKEVAIKALSSFGFTITEIVDVTPLPHNGCKPPKKPR 126
>gi|226203|prf||1501255B ribosomal protein S19
Length = 129
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG--NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
++G AHV ++FNNT ITITD G T+A SS V + SP+AA + + KA
Sbjct: 7 INGIAHVHASFNNTIITITDQTGAQETLAKSSGGTVVKQNRDEASPYAAMQMAEVVAEKA 66
Query: 75 QNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ G+ ++V+V G G G + +RAL G I I DVT HNG R K
Sbjct: 67 LDRGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTPTPHNGTRAPK 125
>gi|88607425|ref|YP_504914.1| 30S ribosomal protein S11 [Anaplasma phagocytophilum HZ]
gi|123750119|sp|Q2GL37|RS11_ANAPZ RecName: Full=30S ribosomal protein S11
gi|88598488|gb|ABD43958.1| ribosomal protein S11 [Anaplasma phagocytophilum HZ]
Length = 124
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH- 77
GR H+ +T+NN +TI D G+ + +S F GS+K++P+AAQ
Sbjct: 13 GRVHICATYNNVIVTIADQQGHVLVTTSAGACNFKGSKKSTPYAAQETVARAVKAVIERN 72
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V +SG GAGR++A+RA++A + SI DVT + HNGC+ KRRR+
Sbjct: 73 GMKTVSVCISGPGAGREAAIRAVQACNLNVTSIKDVTKLPHNGCKLPKRRRV 124
>gi|307069671|ref|YP_003878148.1| 30S ribosomal subunit protein S11 [Candidatus Zinderia insecticola
CARI]
gi|306482931|gb|ADM89802.1| 30S ribosomal subunit protein S11 [Candidatus Zinderia insecticola
CARI]
Length = 139
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 72/111 (64%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G AH+ +T+NNT ITITD +GNTI+WSS GF GS+K++ FAAQ+AT G
Sbjct: 29 GIAHINTTYNNTIITITDKNGNTISWSSSGESGFKGSKKSTSFAAQIATKKLGKSLVERG 88
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ L +K+ G G GR+ +R L +G I+ I D+T + HNGCR K+RRI
Sbjct: 89 LKILIIKIKGPGIGREVCIRTLNNLGIRIIQIQDITSVPHNGCRQSKKRRI 139
>gi|42520508|ref|NP_966423.1| 30S ribosomal protein S11 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|81652513|sp|Q73HA8|RS11_WOLPM RecName: Full=30S ribosomal protein S11
gi|42410247|gb|AAS14357.1| ribosomal protein S11 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 128
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
++G H+ +TFNNT + +TD HGNT+ +S GFSGSRK++P+AA A + + A
Sbjct: 13 EFITGVVHIRATFNNTFVNVTDVHGNTLCQTSVGACGFSGSRKSTPYAAGKAAESAAKNA 72
Query: 75 QN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM + V + G G G ++A++A ++ G T+ SI D T I HNGCR RK+RR+
Sbjct: 73 MERFGMKVVSVIIRGPGFGTEAAVKAFQSCGLTVTSIADKTAIPHNGCRLRKKRRV 128
>gi|225630279|ref|YP_002727070.1| ribosomal protein S11 [Wolbachia sp. wRi]
gi|254811058|sp|C0R2Y7|RS11_WOLWR RecName: Full=30S ribosomal protein S11
gi|225592260|gb|ACN95279.1| ribosomal protein S11 [Wolbachia sp. wRi]
Length = 128
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
+ + +K ++G H+ +TFNNT + +TD HGNT+ +S GFSGSRK++P+AA
Sbjct: 2 KKVKTVGKSKKEFITGVVHIRATFNNTFVNVTDVHGNTLCQTSVGACGFSGSRKSTPYAA 61
Query: 64 QVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A + + A GM + V + G G G ++A++AL++ G T+ SI D T I HNGCR
Sbjct: 62 GKAAEAAAKNAIERFGMKVVSVIIRGPGFGTEAAVKALQSCGLTVTSIADKTAIPHNGCR 121
Query: 123 PRKRRRI 129
RK+RR+
Sbjct: 122 LRKKRRV 128
>gi|161544985|ref|YP_154055.2| 30S ribosomal protein S11 [Anaplasma marginale str. St. Maries]
gi|255003331|ref|ZP_05278295.1| 30S ribosomal protein S11 [Anaplasma marginale str. Puerto Rico]
gi|255004455|ref|ZP_05279256.1| 30S ribosomal protein S11 [Anaplasma marginale str. Virginia]
gi|152060571|sp|Q5PA80|RS11_ANAMM RecName: Full=30S ribosomal protein S11
Length = 124
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH- 77
G H+ +T+NN +TI D G+ + +S F GS+K +P+AAQ
Sbjct: 13 GEVHIYATYNNVIVTIADQQGHVLVTTSAGACNFKGSKKATPYAAQETVARAVKAVVERN 72
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V +SG GAGR++A+RA++ + SI D T + HNGC+ KRRR+
Sbjct: 73 GMRTVSVCISGPGAGREAAIRAVQTCNLNVTSIRDTTKLPHNGCKLPKRRRV 124
>gi|222475349|ref|YP_002563766.1| 30S ribosomal protein S11 (rpsK) [Anaplasma marginale str. Florida]
gi|56388213|gb|AAV86800.1| 30S ribosomal protein S11 [Anaplasma marginale str. St. Maries]
gi|222419487|gb|ACM49510.1| 30S ribosomal protein S11 (rpsK) [Anaplasma marginale str. Florida]
Length = 113
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH- 77
G H+ +T+NN +TI D G+ + +S F GS+K +P+AAQ
Sbjct: 2 GEVHIYATYNNVIVTIADQQGHVLVTTSAGACNFKGSKKATPYAAQETVARAVKAVVERN 61
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V +SG GAGR++A+RA++ + SI D T + HNGC+ KRRR+
Sbjct: 62 GMRTVSVCISGPGAGREAAIRAVQTCNLNVTSIRDTTKLPHNGCKLPKRRRV 113
>gi|1350924|sp|P47422|RS11_MYCGE RecName: Full=30S ribosomal protein S11
Length = 131
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ N+ SG HV + NNT ++ TDP GN + W+S VGF G RK +P++A VA D
Sbjct: 3 KKKKINVPSGLIHVSCSPNNTIVSATDPSGNVLCWASSGTVGFKGFRKKTPYSAGVAADK 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ + GM S+++ + G G G+D+ +R+ G TI I + T I HNGC+
Sbjct: 63 VAKTVKEMGMGSVKMYLKGTGRGKDTTIRSFANAGITITEINEKTPIPHNGCK 115
>gi|322369535|ref|ZP_08044100.1| 30S ribosomal protein S11P [Haladaptatus paucihalophilus DX253]
gi|320551267|gb|EFW92916.1| 30S ribosomal protein S11P [Haladaptatus paucihalophilus DX253]
Length = 128
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G AHV ++FNNT ITITD G T+A SS V ++SP+AA + + + +
Sbjct: 7 TWGIAHVHASFNNTIITITDLTGAETVAKSSGGSVVKQNRDESSPYAAMQMAETVAEEVK 66
Query: 76 NHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G+ L ++V G G G + +RAL G I I DVT I H+G R K
Sbjct: 67 AAGIDGLHIRVRGPGGNLQQNPGPGAQATIRALARAGIEIGRIEDVTPIPHDGTRAPK 124
>gi|67968323|dbj|BAE00223.1| ribosomal protein S11 [Selaginella uncinata]
Length = 137
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 67/127 (52%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K R +R+ I G H ++ NNT T+ D G + GF G+RK + FA
Sbjct: 10 KRIGGTRGSKRRRIPKGVTHTRASLNNTIATVADARGQVVPRFPAGACGFGGARKGTAFA 69
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A ++ + G+ EV ++G G GRD+ALRA+R G + D+T + HNGCR
Sbjct: 70 AQTAAENAIRALIDQGVKRAEVVITGPGPGRDTALRAIRGGGVVLGLARDITPMPHNGCR 129
Query: 123 PRKRRRI 129
P K+R I
Sbjct: 130 PPKKRCI 136
>gi|187763134|ref|YP_001876609.1| ribosomal protein S11 [Welwitschia mirabilis]
gi|224493287|sp|B2Y1Z2|RR11_WELMI RecName: Full=30S ribosomal protein S11, chloroplastic
gi|163311664|gb|ABY26822.1| ribosomal protein S11 [Welwitschia mirabilis]
Length = 142
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ E +NI G H++++FNNT IT+TD G+ I WSS GF G +K S FAAQ AT+
Sbjct: 25 KKPEIRNIDKGIIHILASFNNTIITVTDVKGHVIYWSSAGACGFKGPKKGSAFAAQKATE 84
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + V ++G G GRD+ALR ++ I ++ D+T HNGCRP +RR
Sbjct: 85 SVIYRVV---IKRAAVLITGCGKGRDAALRVIQHNRIPIRAVVDITPNPHNGCRPPAKRR 141
Query: 129 I 129
+
Sbjct: 142 V 142
>gi|55376998|ref|YP_134848.1| 30S ribosomal protein S11P [Haloarcula marismortui ATCC 43049]
gi|266963|sp|P10788|RS11_HALMA RecName: Full=30S ribosomal protein S11P; AltName: Full=HS19;
AltName: Full=HmaS11
gi|148772|gb|AAA73211.1| ribosomal protein HmaS11 [Haloarcula marismortui]
gi|55229723|gb|AAV45142.1| 30S ribosomal protein S11P [Haloarcula marismortui ATCC 43049]
Length = 129
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AHV ++FNNT ITITD G T+A SS V + SP+AA + + KA
Sbjct: 8 IWGIAHVHASFNNTIITITDQTGAETLAKSSGGTVVKQNRDEASPYAAMQMAEVVAEKAL 67
Query: 76 NHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ G+ ++V+V G G G + +RAL G I I DVT H+G R K
Sbjct: 68 DRGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTPTPHDGTRAPK 125
>gi|91205854|ref|YP_538209.1| 30S ribosomal protein S11 [Rickettsia bellii RML369-C]
gi|157826786|ref|YP_001495850.1| 30S ribosomal protein S11 [Rickettsia bellii OSU 85-389]
gi|123084555|sp|Q1RHP4|RS11_RICBR RecName: Full=30S ribosomal protein S11
gi|166231828|sp|A8GVD6|RS11_RICB8 RecName: Full=30S ribosomal protein S11
gi|91069398|gb|ABE05120.1| 30S ribosomal protein S11 [Rickettsia bellii RML369-C]
gi|157802090|gb|ABV78813.1| 30S ribosomal protein S11 [Rickettsia bellii OSU 85-389]
Length = 127
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 75/114 (65%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
I G H+ ++FNNT +T TD GN I+ +S GF G++K +P+AAQ+ D + KA+
Sbjct: 14 ITLGVVHIRASFNNTIVTFTDVQGNAISSASAGANGFKGAKKATPYAAQITIDKAAEKAK 73
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+G+ ++ +++ G GA R+SA+RAL F + SI DV+ IAHNG + KRRR+
Sbjct: 74 EYGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVKAPKRRRV 127
>gi|257053586|ref|YP_003131419.1| 30S ribosomal protein S11P [Halorhabdus utahensis DSM 12940]
gi|256692349|gb|ACV12686.1| ribosomal protein S11 [Halorhabdus utahensis DSM 12940]
Length = 128
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT ITITD G T+A SS V + SP+AA + +
Sbjct: 8 WGIAHVHASFNNTVITITDQTGAETLAKSSGGTVVKQNRDEASPYAAMQMAETVAEDVLQ 67
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G+ + V+V G G G + +RAL G I I DVT I H+G R K
Sbjct: 68 QGVEGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTRSPK 124
>gi|6601579|gb|AAF19040.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum]
Length = 121
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/119 (42%), Positives = 82/119 (68%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ +G AH+ +T NN+ ITITD +GN I WSS +G+ G++K +P+++ VA +
Sbjct: 3 KKKKTVASNGIAHIHATSNNSIITITDINGNAITWSSSGAIGYKGAKKKTPYSSGVAAEK 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A G+S++++ V+G+G G+++A+R+L A G TI I DVT I HNGCRP K+ R
Sbjct: 63 AAKEAMAMGLSTIKIYVNGVGRGKETAIRSLAACGLTITEIHDVTPIPHNGCRPPKKPR 121
>gi|222139918|ref|YP_002519986.1| ribosomal protein S11 [Ephedra equisetina]
gi|220983587|dbj|BAH11354.1| ribosomal protein S11 [Ephedra equisetina]
Length = 132
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAA 63
S +R +E + + G H+ S+FNNT IT+TD G+ ++WSS GF G +K S FAA
Sbjct: 10 SKNRRIKKEIRRVDRGIIHIQSSFNNTIITVTDVLGHVLSWSSAGACGFKGPKKGSAFAA 69
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
Q AT++ + ++ + ++G G GRD+ALR ++ I ++ D+T HNGCRP
Sbjct: 70 QTATENITRTVV---INRAAILITGCGKGRDAALRVIQHSRILIRAVLDITPNPHNGCRP 126
Query: 124 RKRRRI 129
+RR+
Sbjct: 127 PVKRRV 132
>gi|31544833|ref|NP_853411.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum str. R(low)]
gi|33860209|sp|Q9RDV7|RS11_MYCGA RecName: Full=30S ribosomal protein S11
gi|31541679|gb|AAP56979.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum str. R(low)]
gi|284930907|gb|ADC30846.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum str. R(high)]
gi|284931663|gb|ADC31601.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum str. F]
Length = 121
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 82/119 (68%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ +G AH+ +T NN+ ITITD +GN I WSS +G+ G++K +P++A VA +
Sbjct: 3 KKKKTVASNGIAHIHATSNNSIITITDINGNAITWSSSGAIGYKGAKKKTPYSAGVAAEK 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ +A G+S++++ V+G+G G+++A+R+L A G TI I DVT I HNGCRP K+ R
Sbjct: 63 AAKEAMAMGLSTIKIYVNGVGRGKETAIRSLAACGLTITEIHDVTPIPHNGCRPPKKPR 121
>gi|197131634|gb|ACH47335.1| ribosomal protein S11 [Sarcocaulon vanderietiae]
Length = 144
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 64/120 (53%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
++ + + G H+ +T NNT +++ D G + W+S GF +RK +PFAAQ T
Sbjct: 25 RKKLRRLKKGFIHIHATLNNTIVSVADRGGRVVIWASAGACGFKSNRKGTPFAAQTTTQY 84
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V V G+G GRD ALR + + D T + HNGCRP KRRR+
Sbjct: 85 AIQPLVKKGMRNVNVYVKGVGKGRDGALRTIHRSSLRVYLTRDETPVPHNGCRPPKRRRV 144
>gi|256370801|ref|YP_003108626.1| 30S ribosomal protein S11 [Candidatus Sulcia muelleri SMDSEM]
gi|256009593|gb|ACU52953.1| 30S ribosomal subunit protein S11 [Candidatus Sulcia muelleri
SMDSEM]
Length = 186
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/111 (54%), Positives = 78/111 (70%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G+A++ STFNN ITIT+ G+ IAWSS +GF GS+KN+P+AAQVA D + K G
Sbjct: 76 GKAYINSTFNNIIITITNKKGDVIAWSSAGKMGFKGSKKNTPYAAQVAAADVAEKGLKAG 135
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ L+V V G GAGRDSA+R L FT++ I D+T I HNGCRP KRRR+
Sbjct: 136 LKKLKVIVKGPGAGRDSAIRTLVNKNFTLLVIKDITPIPHNGCRPPKRRRV 186
>gi|11467126|ref|NP_054427.1| ribosomal protein S11 [Marchantia polymorpha]
gi|417734|sp|P26870|RT11_MARPO RecName: Full=Ribosomal protein S11, mitochondrial
gi|250826|gb|AAB22418.1| ribosomal protein S11 [Marchantia polymorpha=liverwort, Peptide
Mitochondrial, 125 aa]
gi|786211|gb|AAC09424.1| rps11 [Marchantia polymorpha]
Length = 125
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 71/110 (64%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ STF NT IT+TD +GNT WSS VGF GSR+++ +AAQ ++ + A G
Sbjct: 16 ITYIQSTFGNTIITLTDYNGNTKTWSSSGSVGFKGSRRSTNYAAQATAENAARVAIQLGF 75
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+EV++ GLG G++S+LR L+ G I I DVT HNGCRP K+RR+
Sbjct: 76 KFVEVRIKGLGYGKESSLRGLKLGGLIITKIRDVTPTPHNGCRPPKKRRV 125
>gi|126643073|ref|YP_001086057.1| 30S ribosomal protein S11 [Acinetobacter baumannii ATCC 17978]
Length = 88
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 42 IAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALR 101
+AW++ GF GSRK++PFAAQVA + A ++G+ +L+V V G G GR+SA+RAL
Sbjct: 1 MAWATSGGQGFRGSRKSTPFAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALG 60
Query: 102 AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+G+ I SI DVT I HNGCRP K+RR+
Sbjct: 61 AVGYKINSITDVTPIPHNGCRPPKKRRV 88
>gi|269958606|ref|YP_003328393.1| 30S ribosomal protein S11 [Anaplasma centrale str. Israel]
gi|269848435|gb|ACZ49079.1| 30S ribosomal protein S11 [Anaplasma centrale str. Israel]
Length = 124
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH- 77
GR H+ +T+NN +TI D G+ + +S F GS+K +P+AAQ
Sbjct: 13 GRVHIYATYNNVIVTIADQQGHVLITTSAGACSFKGSKKATPYAAQETVARAVKAVVERN 72
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++ V +SG GAGR++A+RA++ + SI D T + HNGC+ KRRR+
Sbjct: 73 GMRTVSVCISGPGAGREAAIRAVQTCNLNVTSIRDTTKLPHNGCKLPKRRRV 124
>gi|220983427|dbj|BAH11196.1| ribosomal protein S11 [Welwitschia mirabilis]
Length = 145
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ E +NI G H+ ++FNNT IT+TD G+ I WSS GF G +K S FAAQ AT+
Sbjct: 28 KKPEIRNIDKGIIHIRASFNNTIITVTDVTGHVIYWSSAGACGFKGPKKGSAFAAQKATE 87
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + V ++G G GRD+ALR ++ I ++ D+T HNGCRP +RR
Sbjct: 88 SVIYRVV---IKRAAVLITGCGKGRDAALRVIQHNRIPIRAVVDITPNPHNGCRPPAKRR 144
Query: 129 I 129
+
Sbjct: 145 V 145
>gi|254995157|ref|ZP_05277347.1| 30S ribosomal protein S11 [Anaplasma marginale str. Mississippi]
Length = 113
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH- 77
G H+ +T+NN +TI D G+ + +S F GS+K +P+AAQ
Sbjct: 2 GEVHIYATYNNVIVTIADQQGHVLVTTSAGACNFKGSKKATPYAAQETVARAVKAVVERN 61
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++ V +SG GAGR++A+RA++ + SI D T + HNGC+ KRRR+
Sbjct: 62 GVRTVSVCISGPGAGREAAIRAVQTCNLNVTSIRDTTKLPHNGCKLPKRRRV 113
>gi|262186728|ref|YP_003275987.1| ribosomal protein S11 [Pleurozia purpurea]
gi|237780725|gb|ACR19371.1| ribosomal protein S11 [Pleurozia purpurea]
Length = 125
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 70/110 (63%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ STF NT IT+TD GNT W+S VGF GSR+++ +AAQ ++ + A G
Sbjct: 16 ITYIQSTFGNTIITLTDYDGNTKTWASSGSVGFKGSRRSTNYAAQATAENAARAAIQLGF 75
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+EV++ GLG G++S+LR L+ G I I DVT HNGCRP K+RR+
Sbjct: 76 KFVEVRIKGLGYGKESSLRGLKLGGLIITKIRDVTPTPHNGCRPPKKRRV 125
>gi|116335039|ref|YP_802534.1| 30S ribosomal protein S11 [Candidatus Carsonella ruddii PV]
gi|123025708|sp|Q05FK3|RS11_CARRP RecName: Full=30S ribosomal protein S11
gi|116235320|dbj|BAF35168.1| ribosomal protein S11 [Candidatus Carsonella ruddii PV]
Length = 118
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 70/112 (62%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G ++ STFNNT T+TD GNTI W S ++G+ G +K++ A+Q+ ++ + +
Sbjct: 7 RGIIYIHSTFNNTISTLTDVFGNTIVWYSAGILGYKGPKKSTSLASQLISEKITISILKN 66
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +++ + GLG G+++ LR + G I SI D+T I HNGCR +K+RR+
Sbjct: 67 NIKVVDIYIKGLGLGKETTLRIINNSGIFIRSITDITPIPHNGCRKKKKRRV 118
>gi|229315918|ref|YP_002860144.1| ribosomal protein S11 [Micromonas sp. RCC299]
gi|226431203|gb|ACO55608.1| ribosomal protein S11 [Micromonas sp. RCC299]
Length = 153
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV+S NNT +T+T G T+AWSS GF GSR+ + +AAQ + + A +
Sbjct: 44 IVHVLSLLNNTFVTLTTLDGKTLAWSSGGTEGFKGSRRATSYAAQSSGETIGRIALEKKL 103
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S + + G G G++++LR L+ G IV I +V+ I HNGCRP+K+RR+
Sbjct: 104 SVVSACLKGPGYGKEASLRGLKMAGIKIVKIKEVSSIPHNGCRPKKKRRV 153
>gi|72084053|ref|XP_780201.1| PREDICTED: hypothetical protein isoform 1 [Strongylocentrotus
purpuratus]
gi|115973540|ref|XP_001178889.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 261
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ +T+NNT +++ + G T+A +S GF ++K + AAQ A + KA + GM
Sbjct: 152 IVNIKATYNNTHVSVAEHTGRTVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKGM 211
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+++ V + G+G GR ++++ L+ G IVSI D T + HNGCRPRK RR+
Sbjct: 212 NAVRVVIKGIGPGRQTSIKGLQMGGLDIVSITDNTPVPHNGCRPRKARRL 261
>gi|71894585|ref|YP_278693.1| 30S ribosomal protein S11 [Mycoplasma synoviae 53]
gi|123734273|sp|Q4A5I9|RS11_MYCS5 RecName: Full=30S ribosomal protein S11
gi|71851373|gb|AAZ43982.1| 30S ribosomal protein S11 [Mycoplasma synoviae 53]
Length = 129
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 57/118 (48%), Positives = 75/118 (63%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R ++KNI SG AH+ S+ NT IT TD GN IAWSS VGF G++K + FAA A
Sbjct: 3 RKAKKKNISSGVAHIHSSNQNTIITFTDEKGNVIAWSSSGKVGFKGTKKKTSFAASEAAK 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
D + A+ HG+S + V++ GLG+G+DSA + + G + I DVT I HNG RP KR
Sbjct: 63 DAAQMAKEHGISQVRVEMKGLGSGKDSARKQIEVWGIKVTEIKDVTPIPHNGTRPPKR 120
>gi|313126018|ref|YP_004036288.1| SSU ribosomal protein s11p [Halogeometricum borinquense DSM 11551]
gi|312292383|gb|ADQ66843.1| SSU ribosomal protein S11P [Halogeometricum borinquense DSM 11551]
Length = 131
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT ITITD G TIA SS V + SP+AA + + + +
Sbjct: 11 WGIAHVHASFNNTLITITDQTGAETIAKSSGGAVVKQNRDEASPYAAMQMAEKVAEEVKA 70
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ L V+V G G G + +RAL G I I DVT I H+G R K R
Sbjct: 71 AGIEGLHVRVRGPGGNLNKSPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTRAPKNSR 130
Query: 129 I 129
+
Sbjct: 131 L 131
>gi|283780398|ref|YP_003371153.1| 30S ribosomal protein S11 [Pirellula staleyi DSM 6068]
gi|283438851|gb|ADB17293.1| ribosomal protein S11 [Pirellula staleyi DSM 6068]
Length = 126
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 82/121 (67%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ + R+N+ AHV +TFNNT +T+TD G+T+ W+S GF GSRK++PFA Q A
Sbjct: 6 KKKIRRNVTVAIAHVKATFNNTTVTVTDTKGDTLCWASAGTCGFKGSRKSTPFAGQCAGQ 65
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ KA +G+ LEV+V G G+GR+SA+ AL+ G T+ +I D T I HNGCRP KRRR
Sbjct: 66 QAAEKASKYGVKELEVRVKGPGSGRESAITALQTAGMTVKTIEDCTPIPHNGCRPPKRRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|41179071|ref|NP_958411.1| ribosomal protein S11 [Chlamydomonas reinhardtii]
gi|39932333|sp|Q7YKX3|RR11_CHLRE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|32527657|gb|AAP86220.1| ribosomal protein S11 [Chlamydomonas reinhardtii]
gi|33342464|gb|DAA01543.1| ribosomal protein S11 [Chlamydomonas reinhardtii]
gi|213517436|gb|ACJ50142.1| ribosomal protein S11 [Chlamydomonas reinhardtii]
Length = 130
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKN-IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ + K I G H+ + +NT +TIT+ G + WSS GF G RK++
Sbjct: 1 MAKQTRKLTTNKTKKKIFRGVVHIQAGHHNTIVTITNIRGEVLCWSSAGACGFRGKRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAA+ A + + K+++ M + ++ V+G G GR+SA+R + G + I + T I HN
Sbjct: 61 SFAAKKAAETVARKSRDFTMKAAKILVTGPGQGRESAIREIFKAGIKVSVIREKTGIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+R +
Sbjct: 121 GCRPPKKRSV 130
>gi|221116787|ref|XP_002165471.1| PREDICTED: similar to GA18718 [Hydra magnipapillata]
Length = 173
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
V +T+NNT +TD G T W+S + GF S++ + +A +VA + + KA + G+
Sbjct: 65 IVIVKATYNNTLCYLTDHKGITATWTSAGIEGFKNSKRGTNYAGKVAAESLAKKANDLGV 124
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +KV G+G GR A++AL +I +VSI D T I HNG RP+K+RR+
Sbjct: 125 NKVRLKVRGMGPGRMDAVKALASI-LDVVSITDTTPIPHNGPRPKKQRRL 173
>gi|226227381|ref|YP_002761487.1| 30S ribosomal protein S11 [Gemmatimonas aurantiaca T-27]
gi|226090572|dbj|BAH39017.1| 30S ribosomal protein S11 [Gemmatimonas aurantiaca T-27]
Length = 125
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 8 IRNRERKNIV-SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
+ ++ + G AHV +TFNNT ITITD HGN ++W S GF GS+K++PFAA VA
Sbjct: 3 TAKKTKRVVEAEGIAHVSATFNNTTITITDMHGNAVSWGSAGKAGFKGSKKSTPFAATVA 62
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
++ C+ +A G+ + V+V G G+GR+SA++AL A G T+ SI DVT I HNGCRP KR
Sbjct: 63 SEQCAREALTLGVRRVHVRVQGPGSGRESAIQALAAAGLTVKSIRDVTPIPHNGCRPPKR 122
Query: 127 RRI 129
RR+
Sbjct: 123 RRV 125
>gi|302830924|ref|XP_002947028.1| hypothetical protein VOLCADRAFT_103256 [Volvox carteri f.
nagariensis]
gi|300268072|gb|EFJ52254.1| hypothetical protein VOLCADRAFT_103256 [Volvox carteri f.
nagariensis]
Length = 385
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 70/111 (63%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G H+ +TFNN +T+TD G ++S +VGF G+R++ P AA+ A ++ + +A
Sbjct: 92 EGIIHIQNTFNNIILTLTDQQGFIKTYTSAGIVGFRGARRSQPVAAERAAEELARRALKL 151
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G S++ +++ G G + A+++L A G I+S+ DVT I +NGCR KRRR
Sbjct: 152 GYSTVSIRLKGPGNTKQYAVQSLAAAGLQIISLADVTPIPYNGCRLPKRRR 202
>gi|222480230|ref|YP_002566467.1| ribosomal protein S11 [Halorubrum lacusprofundi ATCC 49239]
gi|222453132|gb|ACM57397.1| ribosomal protein S11 [Halorubrum lacusprofundi ATCC 49239]
Length = 129
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT IT+TD G TIA SS V + SP+AA + + + ++
Sbjct: 9 WGIAHVYASFNNTLITVTDETGAETIAKSSGGTVVKQNRDEASPYAAMQMAEVVAERVKD 68
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + V+V G G G + +RAL G I I DVT I H+G + K +R
Sbjct: 69 AGLEGVHVRVRGPGGNLNKSTGPGAQATIRALSRAGVEIGRIEDVTPIPHDGTKAPKNKR 128
Query: 129 I 129
+
Sbjct: 129 V 129
>gi|257388631|ref|YP_003178404.1| 30S ribosomal protein S11P [Halomicrobium mukohataei DSM 12286]
gi|257170938|gb|ACV48697.1| ribosomal protein S11 [Halomicrobium mukohataei DSM 12286]
Length = 129
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT ITITD G T+A SS V + SP+AA + + KA+
Sbjct: 9 WGIAHVYASFNNTIITITDQTGAETLAKSSGGTVVKQNRDEASPYAAMQMAEVVAEKAKA 68
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ + V V G G G + +RAL G I I DVT I H+G R K
Sbjct: 69 QNIEGVHVNVRGPGGNQQKSPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTRGPK 125
>gi|326431038|gb|EGD76608.1| 30S ribosomal protein S11 [Salpingoeca sp. ATCC 50818]
Length = 244
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
+ A + + NNT +TIT G+ I S + GF G+RK++ +AA+V A
Sbjct: 130 KLERALARIKVSHNNTIVTITTLDGDPIVTKSAGMCGFKGARKSTTYAARVVAQQAGEAA 189
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
N G+ ++ V V GLG GR +AL+ L I + DVT + HNGCRP+K RR+
Sbjct: 190 VNKGVMTVSVLVKGLGPGRVNALKGLVESKLMIDQVADVTPVPHNGCRPKKARRL 244
>gi|301768359|ref|XP_002919598.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 196
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 69 PGQESPLRWAGKKFEEIPIAHIKASYNNTQIQVVSAAHQPLARTSCGTEGFRNAKKGTGI 128
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + KA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 129 AAQTAGIAAAVKAVGKGVTHIRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 188
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 189 RPRKARRL 196
>gi|330723975|gb|AEC46345.1| 30S ribosomal protein S11 [Mycoplasma hyorhinis MCLD]
Length = 134
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 80/126 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + ++KNI SG AH+ ST NT +T TD +GN IAWSS +G+ G++K +P
Sbjct: 1 MAVKKEKPKKIKKKNITSGIAHIHSTHQNTIVTFTDLNGNVIAWSSSGAIGYKGTKKKTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA +A S A+ HG+ ++V++ GLG G+DSA + + G +++ I DVT I HNG
Sbjct: 61 YAASLAAAAASEGAKEHGIKEVKVELKGLGPGKDSARKQIEVSGISVIEIKDVTPIPHNG 120
Query: 121 CRPRKR 126
RP ++
Sbjct: 121 TRPPRK 126
>gi|289580106|ref|YP_003478572.1| ribosomal protein S11P [Natrialba magadii ATCC 43099]
gi|289529659|gb|ADD04010.1| ribosomal protein S11P [Natrialba magadii ATCC 43099]
Length = 129
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT +T+TD G TI SS + SP+AA + + + +
Sbjct: 8 WGVAHVHASFNNTIMTVTDLTGSETITKSSGGTAVKQNRDEASPYAAMQMAESVAEEVKA 67
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G++ L V+V G G G + +RAL G I I DVT I H+G R K
Sbjct: 68 AGITGLHVRVRGPGGNLQKSPGPGAQATIRALARSGIEIGRIEDVTPIPHDGSRAPK 124
>gi|110668835|ref|YP_658646.1| 30S ribosomal protein S11P [Haloquadratum walsbyi DSM 16790]
gi|121684702|sp|Q18G55|RS11_HALWD RecName: Full=30S ribosomal protein S11P
gi|109626582|emb|CAJ53046.1| ribosomal protein S11 [Haloquadratum walsbyi DSM 16790]
Length = 131
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M +S + + G AHV ++FNNT IT+TD G TI SS V + S
Sbjct: 1 MSESENTEKR-------WGVAHVHASFNNTLITVTDLTGAETIVKSSGGAVVKQNRDEAS 53
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSIC 111
P+AA + + + G+ L V+V G G G + +RAL G I I
Sbjct: 54 PYAAMQMAESVAEDIKAAGIDGLHVRVRGPGGNGNKSPGPGAQATIRALARAGLEIGRIE 113
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT I H+G R K R+
Sbjct: 114 DVTPIPHDGTRAPKNSRL 131
>gi|255018383|ref|ZP_05290509.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL F2-515]
Length = 118
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAWSSAGSLGFKGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSIC 111
FAAQ+A + + AQ HG+ +LEV V G G+GR++A+RAL+A G + +I
Sbjct: 61 FAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIK 111
>gi|261888208|gb|ACY06063.1| ribosomal protein S11 [Volvox carteri f. nagariensis]
Length = 130
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKN-IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K ++ + K + G H+ + +NT +TIT+ G + WSS GF G RK++
Sbjct: 1 MAKQIRKLTTNKTKKKVFRGVVHIQAGHHNTIVTITNIRGEVLCWSSAGACGFRGKRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAA+ A + + K+++ + + ++ V+G G GR+S++R + G + I + T I HN
Sbjct: 61 SFAAKKAAETVARKSRDFAIKAAKILVTGPGQGRESSIREIFKAGIKVSVIREKTGIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+R +
Sbjct: 121 GCRPPKKRSV 130
>gi|205355607|ref|ZP_03222377.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205346384|gb|EDZ33017.1| 30S ribosomal protein S11 [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 100
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 31 RITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
+T+TD GN IAWSS +GF GS+K++P+AAQ A +D KA+ HG+ + +KV G G
Sbjct: 1 MVTVTDEMGNAIAWSSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPG 60
Query: 91 AGRDSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
+GR++A++++ A+ G + + D+T +AHNGCRP KRRR+
Sbjct: 61 SGRETAVKSVGAMEGIKVTFLKDITPLAHNGCRPPKRRRV 100
>gi|73951432|ref|XP_545845.2| PREDICTED: similar to mitochondrial ribosomal protein S11 isoform a
[Canis familiaris]
Length = 196
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 69 PGQESPLRWAGKKFEEIPIAHIKASYNNTQIQVVSAANQPLARTSCGTEGFRNAKKGTGI 128
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + KA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 129 AAQTAGIAAAVKATGKGVTHIRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 188
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 189 RPRKARRL 196
>gi|149564263|ref|XP_001515236.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 303
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 68/128 (53%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S + R AHV +T+NNT I + +A +S GF +RK +
Sbjct: 176 PGQESTLSWGGRTFEDVPIAHVKATYNNTHIQVVSSKNQPLARTSCGTEGFKNARKATGI 235
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA++ L G ++SI D T + HNGC
Sbjct: 236 AAQTAGIAAAAKATVKGVTHVRVVVKGLGPGRLSAIKGLTMGGLQVISITDNTPVPHNGC 295
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 296 RPRKARRL 303
>gi|109082280|ref|XP_001088313.1| PREDICTED: 28S ribosomal protein S11, mitochondrial [Macaca
mulatta]
Length = 194
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF S+K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASYNNTQIQVVSASNEPLARASCGTEGFRNSKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 127 AAQTAGIAAAAKATQKGVTHIRVVVKGLGPGRLSAIHGLTMGGLEVISITDNTPIPHNGC 186
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 187 RPRKARRL 194
>gi|222084157|ref|YP_002519752.1| ribosomal protein S11 [Gnetum parvifolium]
gi|172048622|sp|A6BM57|RR11_GNEPA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|149941470|dbj|BAF64902.1| ribosomal protein S11 [Gnetum parvifolium]
gi|220983494|dbj|BAH11262.1| ribosomal protein S11 [Gnetum parvifolium]
Length = 132
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 PKSPSRIR--NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
PK R R E + + G H+ ++FNNT IT+T+ G I+WSS GF G +K S
Sbjct: 6 PKKIPRYRRNKPEIRKVDKGIIHIRASFNNTIITVTNVLGCVISWSSAGACGFKGPKKGS 65
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAAQ AT++ ++ V ++G G GRD+ALR + I ++ DVT HN
Sbjct: 66 AFAAQKATENVIRMVV---INRATVLITGCGKGRDAALRVIHQNYIPIHAVLDVTPTPHN 122
Query: 120 GCRPRKRRRI 129
GCRP +RRI
Sbjct: 123 GCRPPVKRRI 132
>gi|78045547|ref|NP_001030250.1| 28S ribosomal protein S11, mitochondrial precursor [Bos taurus]
gi|108935895|sp|P82911|RT11_BOVIN RecName: Full=28S ribosomal protein S11, mitochondrial;
Short=MRP-S11; Short=S11mt; Flags: Precursor
gi|74267946|gb|AAI02298.1| Mitochondrial ribosomal protein S11 [Bos taurus]
Length = 197
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 70 PGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGI 129
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 130 AAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 189
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 190 RPRKARRL 197
>gi|76802058|ref|YP_327066.1| 30S ribosomal protein S11P [Natronomonas pharaonis DSM 2160]
gi|91207660|sp|Q3IQT7|RS11_NATPD RecName: Full=30S ribosomal protein S11P
gi|76557923|emb|CAI49507.1| ribosomal protein S11 [Natronomonas pharaonis DSM 2160]
Length = 127
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G A+V ++FNNT IT+TD G TI SS V + SP+AA + + +
Sbjct: 6 TWGIANVYASFNNTIITVTDMTGAETIVKSSGGTVVKQNRDEASPYAAMQMAEVVAEDVK 65
Query: 76 NHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ G+ + V+V G G G + +RAL G I I DVT I H+G R K
Sbjct: 66 DAGIDGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTRGPK 123
>gi|296475584|gb|DAA17699.1| 28S ribosomal protein S11, mitochondrial precursor [Bos taurus]
Length = 197
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 70 PGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGI 129
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 130 AAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 189
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 190 RPRKARRL 197
>gi|295792001|gb|ADG29010.1| ribosomal protein S11 [Lygodium japonicum]
Length = 131
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M K + R + ++ + G H+ + FNNT +T+TD G W S V GF G+RK +
Sbjct: 1 MTKYQKKNRSRKGKRGLPKGIFHIHAGFNNTIVTVTDVRGQVALWCSAGVSGFKGTRKGT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI-AH 118
PFAAQ AT++ + + G+ EV +SG G GRD+ALRA+R G T+ + DVT
Sbjct: 61 PFAAQTATENVIQSSIDRGVKQAEVMISGPGPGRDTALRAIRRSGITLSFVRDVTPTAPL 120
Query: 119 NGCRPRKRRRI 129
+K+RR+
Sbjct: 121 TDADLQKKRRV 131
>gi|292656899|ref|YP_003536796.1| 30S ribosomal protein S11 [Haloferax volcanii DS2]
gi|291371965|gb|ADE04192.1| ribosomal protein S11 [Haloferax volcanii DS2]
Length = 130
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT IT+TD G TI SS V + SP+AA + + + +
Sbjct: 10 WGIAHVHASFNNTLITVTDITGAETIVKSSGGSVVKQNRDEASPYAAMQMAESVADQIKA 69
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G++ L V+V G G G + +RAL G I I DVT I H+G R K R
Sbjct: 70 AGIAGLHVRVRGPGGNGNKSPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTRAPKNSR 129
Query: 129 I 129
+
Sbjct: 130 L 130
>gi|284165823|ref|YP_003404102.1| ribosomal protein S11P [Haloterrigena turkmenica DSM 5511]
gi|284015478|gb|ADB61429.1| ribosomal protein S11P [Haloterrigena turkmenica DSM 5511]
Length = 129
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT +T+TD G TIA SS + SP+AA + + + +
Sbjct: 8 WGVAHVHASFNNTVMTVTDLTGAETIAKSSGGTAVKQNRDEASPYAAMQMAESVAEEVKA 67
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G++ L V+V G G G + +RAL G I I DVT I H+G R K
Sbjct: 68 AGITGLHVRVRGPGGNLQKSPGPGAQATIRALARSGIEIGRIEDVTPIPHDGSRAPK 124
>gi|90085535|dbj|BAE91508.1| unnamed protein product [Macaca fascicularis]
Length = 194
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF S+K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASYNNTQIQVVSASNEPLARASCGTEGFRNSKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 127 AAQTAGIAAAAKATQKGVTHIRVVVKGLGPGRLSAIHGLTMGGLEVISITDSTPIPHNGC 186
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 187 RPRKARRL 194
>gi|126273837|ref|XP_001370728.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 230
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 66/128 (51%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S + +K AH+ +T+NNT I + A +S GF ++K +
Sbjct: 103 PDQESSLTWGGKKYEEIPIAHIKATYNNTHIQVVSSRNEPFARTSCGTEGFKNAKKATGI 162
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + KA G+ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 163 AAQTAGIAAAVKATAKGVIHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 222
Query: 122 RPRKRRRI 129
RP+K RR+
Sbjct: 223 RPKKARRL 230
>gi|298674772|ref|YP_003726522.1| 30S ribosomal protein S11P [Methanohalobium evestigatum Z-7303]
gi|298287760|gb|ADI73726.1| ribosomal protein S11P [Methanohalobium evestigatum Z-7303]
Length = 126
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ G AH+ S+FNNT IT+TD G T+A SS +V + ++SP+ A + +
Sbjct: 5 IWGVAHIKSSFNNTIITVTDLTGAETLAKSSGGMVTKAARDESSPYTAMQMARQVADMLK 64
Query: 76 NHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ G+ + +KV G G +A+RA G I I DVT + H+G RP R
Sbjct: 65 DKGVQGVHIKVRAPGGNKHRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPEGGR 124
Query: 128 RI 129
R+
Sbjct: 125 RV 126
>gi|91772120|ref|YP_564812.1| 30S ribosomal protein S11P [Methanococcoides burtonii DSM 6242]
gi|121689436|sp|Q12ZR4|RS11_METBU RecName: Full=30S ribosomal protein S11P
gi|91711135|gb|ABE51062.1| SSU ribosomal protein S11P [Methanococcoides burtonii DSM 6242]
Length = 126
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
N + G AH+ +FNNT IT+TD G TIA SS +V + ++SP+ A +
Sbjct: 3 NGIWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADI 62
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
++ G+ + +KV G G +A+RA G I I DVT + H+G RP+
Sbjct: 63 LRDKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGTRPKG 122
Query: 126 RRRI 129
RR+
Sbjct: 123 GRRV 126
>gi|253807634|gb|ACT36212.1| ribosomal protein S11 [Helicosporidium sp. ex Simulium jonesi]
Length = 210
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 64/112 (57%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+G + ST NNT IT+TD GNT+ S +GF +RK+S +AA + + A N
Sbjct: 99 TGIIILQSTMNNTIITLTDLAGNTLFCISAGNLGFKNTRKSSHYAASSVAEKIALNAYNA 158
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G + +K+ GLG GR ALRA + + I D+T + NGCRP ++RRI
Sbjct: 159 GYQYIILKLKGLGLGRTHALRAFKKSHLKFIQIQDITPLPFNGCRPSRKRRI 210
>gi|119960872|ref|YP_948628.1| 30S ribosomal protein S11 [Arthrobacter aurescens TC1]
gi|119947731|gb|ABM06642.1| ribosomal protein S11 [Arthrobacter aurescens TC1]
Length = 98
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 52/98 (53%), Positives = 74/98 (75%)
Query: 32 ITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA 91
++ITDP+G I+W+S VGF GSRK++PFAAQ+A + + +AQ HG+ ++V V G G+
Sbjct: 1 MSITDPNGAVISWASAGEVGFKGSRKSTPFAAQMAAEAAAKRAQEHGLRKVDVFVKGPGS 60
Query: 92 GRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GR++A+R+L+A G + SI DVT AHNGCRP KRRR+
Sbjct: 61 GRETAIRSLQAAGLEVGSIQDVTPSAHNGCRPPKRRRV 98
>gi|304322962|ref|YP_003795509.1| ribosomal protein S11 [Floydiella terrestris]
gi|270048161|gb|ACZ58456.1| ribosomal protein S11 [Floydiella terrestris]
Length = 130
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + + + G H+ + FNNT I+IT+ G+ I WSS G G R+++
Sbjct: 1 MSKQLRKNTKKAKNKVYRGVVHIQTGFNNTLISITNVKGDVICWSSAGASGLKGKRRSTA 60
Query: 61 FAAQVATDDCSAKA-QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AA++A+ + + KA ++ + ++V + G GA R++A+ + G ++ I + T I HN
Sbjct: 61 YAAKLASANAARKAFRDFSVKDVKVMIKGPGAARETAIHEIYKAGMKLIVIREKTGIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|46202867|ref|ZP_00052475.2| COG0100: Ribosomal protein S11 [Magnetospirillum magnetotacticum
MS-1]
Length = 81
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 65/81 (80%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIV 108
+ GF GSRK++P+AAQVA +D KA HGM +LEV+V G GAGR+SALRAL+A+GF I
Sbjct: 1 MQGFKGSRKSTPYAAQVAAEDAGRKASEHGMRTLEVEVKGPGAGRESALRALQAVGFQIT 60
Query: 109 SICDVTMIAHNGCRPRKRRRI 129
SI DVT I HNGCRPRKRRR+
Sbjct: 61 SIRDVTPIPHNGCRPRKRRRV 81
>gi|197129599|gb|ACH46097.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
Length = 184
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G I+SI D + + HNGCR
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGLEIISITDNSPVPHNGCR 177
Query: 123 PRKRRRI 129
PRK RR+
Sbjct: 178 PRKARRV 184
>gi|281341779|gb|EFB17363.1| hypothetical protein PANDA_008238 [Ailuropoda melanoleuca]
Length = 135
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 8 PGQESPLRWAGKKFEEIPIAHIKASYNNTQIQVVSAAHQPLARTSCGTEGFRNAKKGTGI 67
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A + KA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 68 AAQTAGIAAAVKAVGKGVTHIRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 127
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 128 RPRKARRL 135
>gi|293364005|ref|ZP_06610741.1| 30S ribosomal protein S11 [Mycoplasma alligatoris A21JP2]
gi|292552495|gb|EFF41269.1| 30S ribosomal protein S11 [Mycoplasma alligatoris A21JP2]
Length = 128
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 77/118 (65%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R ++KNI SG AH+ ST NT +T D GN IAWSS +G+ G++K +P+AA +A
Sbjct: 3 RKTKKKNITSGVAHIHSTNQNTIVTFADEAGNVIAWSSAGAIGYKGTKKKTPYAAGLAAA 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A+ HG+ +++V++ GLG+G+D+A + + G T+ I DVT + HNG RP KR
Sbjct: 63 AAAEAAKEHGLKTVKVELKGLGSGKDAARKQIEVSGITVTEIKDVTPVPHNGTRPPKR 120
>gi|154151762|ref|YP_001405380.1| 30S ribosomal protein S11P [Candidatus Methanoregula boonei 6A8]
gi|171769716|sp|A7IAH6|RS11_METB6 RecName: Full=30S ribosomal protein S11P
gi|154000314|gb|ABS56737.1| ribosomal protein S11 [Methanoregula boonei 6A8]
Length = 132
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT IT+TD G T+ SS +V ++SP+AA + +A A+
Sbjct: 9 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAANVAAIARE 68
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+ + VKV G G +A+RAL G I I DVT + H+ CRP+
Sbjct: 69 KGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDSCRPK 124
>gi|50753103|ref|XP_413871.1| PREDICTED: mitochondrial ribosomal protein S11 [Gallus gallus]
gi|53130488|emb|CAG31573.1| hypothetical protein RCJMB04_8d12 [Gallus gallus]
Length = 183
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+S R + + I AH+ +T+NNT I + A +S GF ++K + A
Sbjct: 59 RSSMRWDGKTYEEIP--IAHIKATYNNTHIQVVSFDNRPFAHTSCGTEGFQNAKKGTAIA 116
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G ++SI D T + HNGCR
Sbjct: 117 AQTAGIAAAVKARGKGVLHVRVMVKGLGPGRKAAIKGLTMGGLEVISITDNTPVPHNGCR 176
Query: 123 PRKRRR 128
PRK RR
Sbjct: 177 PRKARR 182
>gi|149690755|ref|XP_001503232.1| PREDICTED: similar to mitochondrial ribosomal protein S11 isoform 1
[Equus caballus]
Length = 195
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R ++ AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 68 PGQESSLRWAGKRFEEIPIAHIKASYNNTQIQVMSAANQPLARASCGTEGFRNAKKGTGI 127
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 128 AAQTAGIAAAAKAAGKGVTHIRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 187
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 188 RPRKARRL 195
>gi|197129600|gb|ACH46098.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129607|gb|ACH46105.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
Length = 184
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G I+SI D + + HNGCR
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGLEIISITDNSPVPHNGCR 177
Query: 123 PRKRRRI 129
PRK RR+
Sbjct: 178 PRKARRV 184
>gi|302830123|ref|XP_002946628.1| mitochondrial ribosomal protein S11 [Volvox carteri f. nagariensis]
gi|300268374|gb|EFJ52555.1| mitochondrial ribosomal protein S11 [Volvox carteri f. nagariensis]
Length = 114
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 71/112 (63%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G H+ +TFNN +T+TD G ++S +VGF G+R++ P AA+ A ++ + +A
Sbjct: 3 EGIIHIQNTFNNIILTLTDQQGFIKTYTSAGIVGFRGARRSQPVAAERAAEELARRALKL 62
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G S++ +++ G G + A+++L A G I+S+ DVT I +NGCR KRRR+
Sbjct: 63 GYSTVSIRLKGPGNTKQYAVQSLAAAGLQIISLADVTPIPYNGCRLPKRRRV 114
>gi|197129601|gb|ACH46099.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129602|gb|ACH46100.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129604|gb|ACH46102.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129605|gb|ACH46103.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129606|gb|ACH46104.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
Length = 184
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G I+SI D + + HNGCR
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGLEIISITDNSPVPHNGCR 177
Query: 123 PRKRRRI 129
PRK RR+
Sbjct: 178 PRKARRV 184
>gi|311245645|ref|XP_003121907.1| PREDICTED: 28S ribosomal protein S11, mitochondrial [Sus scrofa]
Length = 196
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P + +R +K AH+ +++NNT+I + +A +S GF ++K +
Sbjct: 69 PGQENSLRWAGKKFEEIPIAHIKASYNNTQIQVVSAAHQPLAHASCGTEGFRNAKKGTGI 128
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA++ L G ++SI D T I HNGC
Sbjct: 129 AAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGC 188
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 189 RPRKARRL 196
>gi|193216736|ref|YP_001999978.1| 30S ribosomal protein S11 [Mycoplasma arthritidis 158L3-1]
gi|226708388|sp|B3PMM2|RS11_MYCA5 RecName: Full=30S ribosomal protein S11
gi|193002059|gb|ACF07274.1| ribosomal protein S11 [Mycoplasma arthritidis 158L3-1]
Length = 124
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ +K + G AH+ ST+ NT ++ +D GN AWSS +G+ G++K +P+AA +A
Sbjct: 3 KKVKKVVPQGIAHIHSTYQNTIVSFSDLKGNVFAWSSSGAIGYKGTKKKTPYAAGLAAAA 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
KA+ G+ + + V G+G G+ +A + + A G TI + DVT HNG RP K+
Sbjct: 63 ALEKAKEFGLKEVSILVKGVGPGKATARKQIEASGLTIKEVKDVTPTPHNGTRPPKK 119
>gi|197129603|gb|ACH46101.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
gi|197129609|gb|ACH46107.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
Length = 184
Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G I+SI D + + HNGCR
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGLEIISITDNSPVPHNGCR 177
Query: 123 PRKRRRI 129
PRK RR+
Sbjct: 178 PRKARRV 184
>gi|224062690|ref|XP_002199618.1| PREDICTED: putative mitochondrial ribosomal protein S11 variant 1
[Taeniopygia guttata]
Length = 184
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G I+SI D + + HNGCR
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGLEIISITDNSPVPHNGCR 177
Query: 123 PRKRRRI 129
PRK RR+
Sbjct: 178 PRKARRV 184
>gi|297740678|emb|CBI30860.3| unnamed protein product [Vitis vinifera]
Length = 689
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 540 MSRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 599
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 600 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 659
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 660 SGMRIGRIEDVTPIP 674
>gi|238810272|dbj|BAH70062.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 130
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/118 (44%), Positives = 77/118 (65%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R ++KNI +G AH+ ST NT +T D GN IAWSS +G+ G++K +P+AA +A
Sbjct: 5 RKTKKKNITNGVAHIHSTNQNTIVTFADEKGNVIAWSSSGAIGYKGTKKKTPYAAGLAAQ 64
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A+ HG+ S++V++ GLGAG+D+A + + G T+ I DVT + HNG RP KR
Sbjct: 65 AAAEAAKEHGIKSVKVQLKGLGAGKDAARKQIEVAGITVTEIRDVTPVPHNGTRPPKR 122
>gi|308190155|ref|YP_003923086.1| 30S ribosomal protein S11 [Mycoplasma fermentans JER]
gi|319777459|ref|YP_004137110.1| 30S ribosomal protein s11 [Mycoplasma fermentans M64]
gi|307624897|gb|ADN69202.1| 30S ribosomal protein S11 [Mycoplasma fermentans JER]
gi|318038534|gb|ADV34733.1| 30S ribosomal protein S11 [Mycoplasma fermentans M64]
Length = 128
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/118 (44%), Positives = 77/118 (65%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R ++KNI +G AH+ ST NT +T D GN IAWSS +G+ G++K +P+AA +A
Sbjct: 3 RKTKKKNITNGVAHIHSTNQNTIVTFADEKGNVIAWSSSGAIGYKGTKKKTPYAAGLAAQ 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A+ HG+ S++V++ GLGAG+D+A + + G T+ I DVT + HNG RP KR
Sbjct: 63 AAAEAAKEHGIKSVKVQLKGLGAGKDAARKQIEVAGITVTEIRDVTPVPHNGTRPPKR 120
>gi|332157865|ref|YP_004423144.1| 30S ribosomal protein S11P [Pyrococcus sp. NA2]
gi|331033328|gb|AEC51140.1| 30S ribosomal protein S11P [Pyrococcus sp. NA2]
Length = 137
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + I+ +E+ G AH+ S++NNT I ITD G TI+ S +V + + S
Sbjct: 1 MSEEQVNIKKKEK----WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPS 56
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G+ + ++V G G +A+RAL G I +
Sbjct: 57 PYAAMLAAKRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVE 116
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 117 DVTPIPHDGTRPK 129
>gi|294155442|ref|YP_003559826.1| 30S ribosomal protein S11 [Mycoplasma crocodyli MP145]
gi|291599941|gb|ADE19437.1| 30S ribosomal protein S11 [Mycoplasma crocodyli MP145]
Length = 128
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 77/118 (65%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R ++KNI +G AH+ ST NT +T D GN I+WSS +G+ G++K +P+AA +A
Sbjct: 3 RKTKKKNITNGVAHIHSTNQNTIVTFADEAGNVISWSSAGAIGYKGTKKKTPYAAGLAAA 62
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ A+ HG+ S++V++ GLGAG+D+A + + G T+ I DVT + HNG RP KR
Sbjct: 63 AAAEAAKEHGIRSVKVELKGLGAGKDAARKQIEVSGITVSEIKDVTPVPHNGTRPPKR 120
>gi|215447796|ref|ZP_03434548.1| 30S ribosomal protein S11 [Mycobacterium tuberculosis T85]
gi|306777806|ref|ZP_07416143.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu001]
gi|306795241|ref|ZP_07433543.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu005]
gi|306805277|ref|ZP_07441945.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu008]
gi|308213891|gb|EFO73290.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu001]
gi|308336564|gb|EFP25415.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu005]
gi|308348194|gb|EFP37045.1| 30S ribosomal protein S11 rpsK [Mycobacterium tuberculosis SUMu008]
Length = 98
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 53/98 (54%), Positives = 74/98 (75%)
Query: 32 ITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA 91
+TITDP GN IAW+S VGF GSRK++PFAAQ+A ++ + KAQ+HG+ ++V V G G+
Sbjct: 1 MTITDPQGNVIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQDHGVRKVDVFVKGPGS 60
Query: 92 GRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GR++A+R+L+A G + +I DVT HNG RP KRRR+
Sbjct: 61 GRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPKRRRV 98
>gi|147919299|ref|YP_686965.1| 30S ribosomal protein S11P [uncultured methanogenic archaeon RC-I]
gi|121682871|sp|Q0W1V4|RS11_UNCMA RecName: Full=30S ribosomal protein S11P
gi|110622361|emb|CAJ37639.1| 30S ribosomal protein S11P [uncultured methanogenic archaeon RC-I]
Length = 132
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
AH+ S+FNNT IT+TD G T+A +S +V ++SP+AA + + +
Sbjct: 6 QFKWAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMAMNVAEQ 65
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
+ G+ + ++V G G +A+R+L G I I DVT I H+G R
Sbjct: 66 IKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGTRAPG 125
Query: 125 -KR-RRI 129
KR RR+
Sbjct: 126 GKRGRRV 132
>gi|20089979|ref|NP_616054.1| 30S ribosomal protein S11P [Methanosarcina acetivorans C2A]
gi|48474511|sp|Q8TRR0|RS11_METAC RecName: Full=30S ribosomal protein S11P
gi|19914942|gb|AAM04534.1| ribosomal protein S11p [Methanosarcina acetivorans C2A]
Length = 126
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
AH+ S+FNNT IT+TD G TIA SS +V + ++SP+ A + + ++
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKD 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G++ + ++V G G +A+RA G I I DVT + H+G RP+ RR
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|149922189|ref|ZP_01910627.1| 30S ribosomal protein S11 [Plesiocystis pacifica SIR-1]
gi|149816929|gb|EDM76414.1| 30S ribosomal protein S11 [Plesiocystis pacifica SIR-1]
Length = 99
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 31 RITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
+TITD +GNTI+W+S V GF GSRK++PFAAQ+A D + AQ+HGM S+ ++VSG G
Sbjct: 1 MVTITDVNGNTISWASSGVRGFKGSRKSTPFAAQLAADQAARAAQDHGMQSVSIRVSGPG 60
Query: 91 AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
AGR+ ALRA+++ G + SI DVT I HNGCRP KRRR+
Sbjct: 61 AGREQALRAIQSAGLRVTSIKDVTPIPHNGCRPPKRRRV 99
>gi|167006129|ref|ZP_02271887.1| hypothetical protein Cjejjejuni_08360 [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 97
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 34 ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGR 93
+TD GN IAWSS +GF GS+K++P+AAQ A +D KA+ HG+ + +KV G G+GR
Sbjct: 1 MTDEMGNAIAWSSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGR 60
Query: 94 DSALRALRAI-GFTIVSICDVTMIAHNGCRPRKRRRI 129
++A++++ A+ G + + D+T +AHNGCRP KRRR+
Sbjct: 61 ETAVKSVGAMEGIKVTFLKDITPLAHNGCRPPKRRRV 97
>gi|21228259|ref|NP_634181.1| 30S ribosomal protein S11P [Methanosarcina mazei Go1]
gi|48474493|sp|Q8PV17|RS11_METMA RecName: Full=30S ribosomal protein S11P
gi|20906716|gb|AAM31853.1| SSU ribosomal protein S11P [Methanosarcina mazei Go1]
Length = 126
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
AH+ S+FNNT IT+TD G TIA SS +V + ++SP+ A + + ++
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G++ + ++V G G +A+RA G I I DVT + H+G RP+ RR
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|330953174|gb|EGH53434.1| 30S ribosomal protein S11 [Pseudomonas syringae Cit 7]
Length = 82
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 56/82 (68%)
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTI 107
GF GSRK++PFAAQVA + A +G+ +L+V V G G GR+SA+RAL G+ I
Sbjct: 1 GGSGFRGSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNGGGYKI 60
Query: 108 VSICDVTMIAHNGCRPRKRRRI 129
SI DVT I HNGCRP K+RR+
Sbjct: 61 ASITDVTPIPHNGCRPPKKRRV 82
>gi|77412563|ref|ZP_00788855.1| ribosomal protein S11 [Streptococcus agalactiae CJB111]
gi|77161386|gb|EAO72405.1| ribosomal protein S11 [Streptococcus agalactiae CJB111]
Length = 97
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/96 (55%), Positives = 70/96 (72%)
Query: 34 ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGR 93
ITD HGN +AWSS +GF GSRK++PFAAQ+A + + AQ HG+ ++EV V G G+GR
Sbjct: 2 ITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGR 61
Query: 94 DSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+SA+RAL A G + +I DVT + HNG RP KRRR+
Sbjct: 62 ESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV 97
>gi|307198273|gb|EFN79273.1| 30S ribosomal protein S11, chloroplastic [Harpegnathos saltator]
Length = 212
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ST NNT +T+TD G + S V GF +RK + AAQ A + + +G+
Sbjct: 103 IINIKSTPNNTIMTLTDCTGKVLTLHSAGVEGFKNARKGTNIAAQQAALTLGHRIREYGI 162
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S+ ++V G+GAGR S+++ L G IVSI D T ++ N RPRK+RR+
Sbjct: 163 ESVRIRVQGIGAGRMSSIKGLSMTGLKIVSITDDTRVSWNPPRPRKQRRV 212
>gi|326926745|ref|XP_003209558.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like [Meleagris
gallopavo]
Length = 203
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + I AH+ +T+NNT I + A +S GF ++K + A
Sbjct: 79 RNSMRWDGKTYEEIP--VAHIKATYNNTHIQVVSFDNRPFARTSCGTEGFQNAKKATAIA 136
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
AQ A + KA+ G+ + V V GLG GR +A++ L G ++SI D T + HNGCR
Sbjct: 137 AQTAGIAAATKARGKGVLHVRVMVKGLGPGRKAAIKGLTMGGLEVISITDNTPVPHNGCR 196
Query: 123 PRKRRR 128
PRK RR
Sbjct: 197 PRKARR 202
>gi|297697367|ref|XP_002825830.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like isoform 1
[Pongo abelii]
Length = 193
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 68/128 (53%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P + +R +K AH+ ++ NNT I + +A +S GF ++K +
Sbjct: 66 PGEENSLRWAGKKFEEIPIAHIKASHNNTLIQVVSASNEPLALASCGTEGFRNAKKGTGV 125
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 126 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 185
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 186 RPRKARRL 193
>gi|58384747|ref|XP_313411.2| AGAP003644-PA [Anopheles gambiae str. PEST]
gi|55241118|gb|EAA08943.2| AGAP003644-PA [Anopheles gambiae str. PEST]
Length = 199
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 59/110 (53%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ + NNT I+ITD G S + GF +RK + AAQ S +A G
Sbjct: 90 ICHIRVSPNNTIISITDAKGVPQFIRSCGIEGFKNTRKGTNIAAQATAISISTRAIERGY 149
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V V GLG GR SA++ L G IVSI D T ++ N RPRK+R++
Sbjct: 150 KTVRVTVRGLGPGRMSAIKGLEMAGLNIVSITDTTPVSWNPPRPRKQRKL 199
>gi|246880763|gb|ACS95075.1| ribosomal protein S11 [Dunaliella salina]
Length = 130
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 1 MPKSPSR-IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + + + +K + G H+ + +NT +TIT+ G + WSS GF G RK++
Sbjct: 1 MARQTRKLTSAKTKKRVYRGIVHIQAGHHNTIVTITNIRGEVLCWSSSGACGFKGKRKST 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAA+ A + + ++++ M +V V+G G GR+SA+R + + I + + I HN
Sbjct: 61 GFAAKKAAETAAKRSRDFLMREAKVLVNGPGQGRESAIREIFKADIKVNVIREKSGIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K R +
Sbjct: 121 GCRPPKARSV 130
>gi|296204126|ref|XP_002749193.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like isoform 2
[Callithrix jacchus]
Length = 198
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF +RK +
Sbjct: 71 PGEESSLRWAGKKFEEIPIAHIKASYNNTQIQVLSASNQPLAHASCGTEGFRNARKGTGI 130
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 131 AAQTAGIAAAAKAIQKGVTHIRVVVKGLGPGRLSAINGLTMGGLEVISITDNTPIPHNGC 190
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 191 RPRKARRL 198
>gi|73667628|ref|YP_303643.1| 30S ribosomal protein S11P [Methanosarcina barkeri str. Fusaro]
gi|91207658|sp|Q46GC9|RS11_METBF RecName: Full=30S ribosomal protein S11P
gi|72394790|gb|AAZ69063.1| SSU ribosomal protein S11P [Methanosarcina barkeri str. Fusaro]
Length = 126
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
AH+ S+FNNT IT+TD G TIA SS +V + ++SP+ A + + ++
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + ++V G G +A+RA G I I DVT + H+G RP+ RR
Sbjct: 66 KGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
Query: 129 I 129
+
Sbjct: 126 V 126
>gi|54020094|ref|YP_115725.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae 232]
gi|72080508|ref|YP_287566.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae 7448]
gi|81378719|sp|Q601J0|RS11_MYCH2 RecName: Full=30S ribosomal protein S11
gi|123761628|sp|Q4A8J6|RS11_MYCH7 RecName: Full=30S ribosomal protein S11
gi|53987267|gb|AAV27468.1| 30s ribosomal protein S11 [Mycoplasma hyopneumoniae 232]
gi|71913632|gb|AAZ53543.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae 7448]
gi|312601095|gb|ADQ90350.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae 168]
Length = 134
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 75/126 (59%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +++ KN+ G AH+ S+ NT I+ TD GN I+W+S +GF G++K +
Sbjct: 1 MATNVKKVKKLRPKNVTVGIAHIHSSHQNTIISFTDKQGNVISWASSGSIGFKGTKKKTA 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA +AT + KA+ HGM + V++ G G G+++A + + G I+ DVT + HNG
Sbjct: 61 YAATLATAAAAQKAREHGMREVIVELKGTGQGKEAARKQIITSGLNILLTKDVTPVPHNG 120
Query: 121 CRPRKR 126
RP ++
Sbjct: 121 TRPPRK 126
>gi|163783135|ref|ZP_02178129.1| 30S ribosomal protein S11 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881469|gb|EDP74979.1| 30S ribosomal protein S11 [Hydrogenivirga sp. 128-5-R1-1]
Length = 90
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ-NHGMSSLEVKVSGLGAGRDSALRA 99
TIAW S VGF G+RK++P+AAQ+A +A G+ EV V G GAGR+SALRA
Sbjct: 1 TIAWESGGTVGFKGTRKSTPYAAQLAAQKAMRRAVNEFGLQEAEVWVKGPGAGRESALRA 60
Query: 100 LRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ A G + +I DVT + HNGCRP RRR+
Sbjct: 61 VFASGIKVTAIRDVTPVPHNGCRPPARRRV 90
>gi|296204124|ref|XP_002749192.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like isoform 1
[Callithrix jacchus]
Length = 192
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ +++NNT+I + +A +S GF +RK +
Sbjct: 65 PGEESSLRWAGKKFEEIPIAHIKASYNNTQIQVLSASNQPLAHASCGTEGFRNARKGTGI 124
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 125 AAQTAGIAAAAKAIQKGVTHIRVVVKGLGPGRLSAINGLTMGGLEVISITDNTPIPHNGC 184
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 185 RPRKARRL 192
>gi|269115048|ref|YP_003302811.1| 30S ribosomal protein S11 [Mycoplasma hominis]
gi|268322673|emb|CAX37408.1| 30S ribosomal protein S11 [Mycoplasma hominis ATCC 23114]
Length = 124
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 69/117 (58%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ +K I G AH+ ST+ NT ++ +D GN AWSS +G+ G++K +P+AA +A
Sbjct: 3 KKNKKVITQGIAHIHSTYQNTIVSFSDLKGNVFAWSSSGAIGYKGTKKKTPYAAGLAAAA 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
KA+ G+ + + V G+G G+ +A +++ G ++ + DVT HNG RP K+
Sbjct: 63 AVEKAKEFGLKEVTILVKGVGPGKSTARKSIETSGLSVKEVKDVTPTPHNGTRPPKK 119
>gi|261403746|ref|YP_003247970.1| ribosomal protein S11P [Methanocaldococcus vulcanius M7]
gi|261370739|gb|ACX73488.1| ribosomal protein S11P [Methanocaldococcus vulcanius M7]
Length = 129
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E+K G H+ S++NNT I TD G TIA S +V + + SP+AA A
Sbjct: 3 EQKKEKWGIIHIYSSYNNTIIHATDITGAETIARISGGMVTRNQRDEGSPYAAMQAAFKL 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ + G+ ++ +KV G G +A+RAL G I I DVT + H+G
Sbjct: 63 AEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGTT 122
Query: 123 PRKR 126
P+KR
Sbjct: 123 PKKR 126
>gi|71893521|ref|YP_278967.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae J]
gi|123734344|sp|Q4AAG5|RS11_MYCHJ RecName: Full=30S ribosomal protein S11
gi|71851648|gb|AAZ44256.1| 30S ribosomal protein S11 [Mycoplasma hyopneumoniae J]
Length = 134
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 75/126 (59%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + +++ KN+ G AH+ S+ NT I+ TD GN I+W+S VGF G++K +
Sbjct: 1 MATNVKKVKKLRPKNVTVGIAHIHSSHQNTIISFTDKQGNVISWASSGSVGFKGTKKKTA 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
+AA +AT + KA+ HG+ + V++ G G G+++A + + G I+ DVT + HNG
Sbjct: 61 YAATLATAAAAQKAREHGIREVIVELKGTGQGKEAARKQIITSGLNILLTKDVTPVPHNG 120
Query: 121 CRPRKR 126
RP ++
Sbjct: 121 TRPPRK 126
>gi|256810444|ref|YP_003127813.1| ribosomal protein S11P [Methanocaldococcus fervens AG86]
gi|256793644|gb|ACV24313.1| ribosomal protein S11P [Methanocaldococcus fervens AG86]
Length = 129
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E+K G H+ S++NNT I TD G TIA S +V + + SP+AA A
Sbjct: 3 EQKKEKWGIVHIYSSYNNTIIHATDITGAETIARISGGMVTRNQRDEGSPYAAMQAAFKL 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ + G+ ++ +KV G G +A+RAL G I I DVT + H+G
Sbjct: 63 AEMLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGTT 122
Query: 123 PRK 125
P+K
Sbjct: 123 PKK 125
>gi|12545455|ref|NP_075005.1| ribosomal protein S11 [Euglena longa]
gi|14285752|sp|P58136|RR11_ASTLO RecName: Full=Plastid 30S ribosomal protein S11
gi|12329919|emb|CAC24616.1| ribosomal protein S11 [Euglena longa]
Length = 112
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 65/108 (60%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
++ +F+NT +T+ D N ++W S V F G +K + FA ++ G +
Sbjct: 4 VYIKMSFHNTIVTVIDGRANVLSWCSSGVCKFKGRQKTTAFATKIVITRALKSVLERGFN 63
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+++KVSG G GR+ A+RA+ +GF + S+ D+T + +NGCRPRKRRR
Sbjct: 64 GIDIKVSGPGFGRNVAIRAIIKMGFKVFSLKDITPLPYNGCRPRKRRR 111
>gi|212223250|ref|YP_002306486.1| 30S ribosomal protein S11P [Thermococcus onnurineus NA1]
gi|254811052|sp|B6YSQ2|RS11_THEON RecName: Full=30S ribosomal protein S11P
gi|212008207|gb|ACJ15589.1| SSU ribosomal protein S11P [Thermococcus onnurineus NA1]
Length = 139
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + + ++++ G AH+ S++NNT I ITD G T++ S +V + + S
Sbjct: 1 MSEEQQVVNLKKKEK--WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPS 58
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G + +KV G G +A+RAL G I +
Sbjct: 59 PYAAMIAAKRAAEEAMEKGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVE 118
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 119 DVTPIPHDGTRPK 131
>gi|325973300|ref|YP_004250364.1| 30S ribosomal protein S11 [Mycoplasma suis str. Illinois]
gi|323651902|gb|ADX97984.1| 30S ribosomal protein S11 [Mycoplasma suis str. Illinois]
Length = 129
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 67/114 (58%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
+ SG HV ++ NNT I+++D GN + S +G+ G++K +P+ A + +A
Sbjct: 16 SFSSGIMHVTTSINNTIISLSDLEGNVVLSESAGTIGYKGTKKATPYVANLVATKIGKEA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ G+S+L + + G+G G++ ALR L +GF I + D T + HNGC P KR R
Sbjct: 76 KEKGVSTLAIHMKGIGKGKEIALRTLIGLGFEITEVADKTPLPHNGCTPSKRPR 129
>gi|223646416|gb|ACN09966.1| 40S ribosomal protein S14 [Salmo salar]
gi|223672263|gb|ACN12313.1| 40S ribosomal protein S14 [Salmo salar]
Length = 215
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 2 PKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
+P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 64 AMAPRKGKEKKEEQVIALGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGG 123
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 124 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRAL 183
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 184 ARSGMKIGRIEDVTPIP 200
>gi|3914896|sp|Q46451|RS11_MYCSP RecName: Full=30S ribosomal protein S11
gi|625802|pir||D49923 ribosomal protein S11 - Chlamydia trachomatis
gi|639723|gb|AAA61683.1| ribosomal protein S11 [Chlamydia muridarum]
Length = 125
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ +K + G AH+ ST+ NT ++ +D GN AWSS +G+ G++K +P+AA +A
Sbjct: 3 KKNKKVVTQGIAHIHSTYQNTIVSFSDLKGNVFAWSSSGAIGYKGTKKKTPYAAGLAAAA 62
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
KA+ G+ + + V G+G G+ +A + + GFTI + DVT HNG RP K+
Sbjct: 63 AVEKAKEFGLKEVSILVKGVGPGKSTARKQIETSGFTIKDVKDVTPTPHNGTRPPKK 119
>gi|88604133|ref|YP_504311.1| 30S ribosomal protein S11P [Methanospirillum hungatei JF-1]
gi|121731777|sp|Q2FT98|RS11_METHJ RecName: Full=30S ribosomal protein S11P
gi|88189595|gb|ABD42592.1| SSU ribosomal protein S11P [Methanospirillum hungatei JF-1]
Length = 131
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT IT+TD G TI SS +V ++SP+AA + + A+
Sbjct: 8 WGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGNVAQAARE 67
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+ L VKV G G +A+RAL G I I DVT + H+ RP+
Sbjct: 68 KGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDSIRPK 123
>gi|289191581|ref|YP_003457522.1| ribosomal protein S11P [Methanocaldococcus sp. FS406-22]
gi|288938031|gb|ADC68786.1| ribosomal protein S11P [Methanocaldococcus sp. FS406-22]
Length = 129
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E K G H+ S++NNT I TD G TIA S +V + + SP+AA A
Sbjct: 3 ETKKEKWGIVHIYSSYNNTIIHATDITGAETIARVSGGMVTRNQRDEGSPYAAMQAAFKL 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ + G+ ++ +KV G G +A+RAL G I I DVT + H+G
Sbjct: 63 AEILKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGTT 122
Query: 123 PRKR 126
P+KR
Sbjct: 123 PKKR 126
>gi|325989736|ref|YP_004249435.1| 30S ribosomal protein S11 [Mycoplasma suis KI3806]
gi|323574821|emb|CBZ40481.1| 30S ribosomal protein S11 [Mycoplasma suis]
Length = 129
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 67/114 (58%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
+ SG HV ++ NNT I+++D GN + S +G+ G++K +P+ A + +A
Sbjct: 16 SFSSGIMHVTTSINNTIISLSDLEGNVVLSESAGTIGYKGTKKATPYVANLVATKIGREA 75
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ G+S+L + + G+G G++ ALR L +GF I + D T + HNGC P KR R
Sbjct: 76 KEKGVSTLAIHMKGIGKGKEIALRTLIGLGFEITEVADKTPLPHNGCTPSKRPR 129
>gi|186920120|ref|YP_001874774.1| ribosomal protein S11 [Hemiselmis andersenii]
gi|186461066|gb|ACC78228.1| ribosomal protein S11 [Hemiselmis andersenii]
Length = 133
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
++ + G +V +TFNNT +T+TD G T+ ++S +G G R+++ +A Q T S
Sbjct: 16 QKYLLQIGIVYVYTTFNNTLMTVTDIKGKTLIFTSAGFLGLKGVRRSTAYAGQTLTTVLS 75
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ +++++ G G R S L+ A I+SI D T IAHNGCR +K+RRI
Sbjct: 76 KNMSKLGIRFIQIRLKGFGNARKSVLKGFAATNLEIISIKDFTSIAHNGCRRKKKRRI 133
>gi|296109381|ref|YP_003616330.1| ribosomal protein S11P [Methanocaldococcus infernus ME]
gi|295434195|gb|ADG13366.1| ribosomal protein S11P [Methanocaldococcus infernus ME]
Length = 128
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
K G H+ S++NNT I TD G TIA S +V + + SP+AA A +
Sbjct: 4 KKEKWGIVHIYSSYNNTIIHATDITGAETIARVSGGMVTRNQRDEGSPYAAMQAAFKLAE 63
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+ G++++ +KV G G +A+RAL G I I DVT I H+G P+
Sbjct: 64 ILKERGVTNIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGTTPK 123
Query: 125 KR 126
KR
Sbjct: 124 KR 125
>gi|194033311|ref|YP_002000431.1| ribosomal protein S11 [Oedogonium cardiacum]
gi|224493282|sp|B3V4S7|RR11_OEDCA RecName: Full=30S ribosomal protein S11, chloroplastic
gi|186968928|gb|ACC97251.1| ribosomal protein S11 [Oedogonium cardiacum]
Length = 130
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS- 59
M K + + ++ + G H+ +++NNT IT+T+ G+ + WSS G G RK++
Sbjct: 1 MSKQLRQSTKKTKRRLYRGVIHIQTSYNNTIITVTNIKGDVMCWSSAGSSGLKGKRKSTA 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
A A + ++ + +V ++G G R++A+ + G + I + + + HN
Sbjct: 61 YAAKLAAANAARKAIRDFSLREAKVLITGPGPARETAIHEIYKAGIKLTVIREKSTVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRRI
Sbjct: 121 GCRPPKRRRI 130
>gi|290988974|ref|XP_002677145.1| predicted protein [Naegleria gruberi]
gi|284090751|gb|EFC44401.1| predicted protein [Naegleria gruberi]
Length = 151
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATD 68
+ +V G AH+ ++FNNT + +TD G TI + + + + SP+AA +A
Sbjct: 20 RKGENELVFGVAHLYASFNNTFVHVTDLSGQETIVKVTGGMKVKADRDEASPYAAMLAAQ 79
Query: 69 DCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
D + + G+++L +K+ G G SALRAL G I I DVT I H+
Sbjct: 80 DVVVRCKELGINALHIKLRATGGVLTKTPGPGAQSALRALARAGIKIGRIEDVTPIPHD 138
>gi|15668363|ref|NP_247159.1| 30S ribosomal protein S11P [Methanocaldococcus jannaschii DSM 2661]
gi|1710725|sp|P54021|RS11_METJA RecName: Full=30S ribosomal protein S11P
gi|1590936|gb|AAB98171.1| SSU ribosomal protein S11P (rpsK) [Methanocaldococcus jannaschii
DSM 2661]
Length = 129
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E+K G H+ S++NNT I TD G TIA S V + + SP+AA A
Sbjct: 3 EQKKEKWGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKL 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ + G+ ++ +KV G G +A+RAL G I I DVT + H+G
Sbjct: 63 AEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGTT 122
Query: 123 PRKR 126
P+KR
Sbjct: 123 PKKR 126
>gi|254796669|ref|YP_003081505.1| ribosomal protein S11 [Neorickettsia risticii str. Illinois]
gi|254589904|gb|ACT69266.1| ribosomal protein S11 [Neorickettsia risticii str. Illinois]
Length = 120
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 70/111 (63%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+E+K+IVSG AHV+ TFNN I++TD GN W+S VGF G++K++ +AAQ
Sbjct: 2 KEKKSIVSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNKKSTAYAAQSVATTL 61
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
K + G+ L V +SG R++ALRA+R G I+S+ D+T + HNG
Sbjct: 62 MTKLKRIGLKILNVYLSGSNPIREAALRAIRNSGIVIISLQDMTPVPHNGV 112
>gi|55642595|ref|XP_510573.1| PREDICTED: mitochondrial ribosomal protein S11 isoform 3 [Pan
troglodytes]
Length = 193
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 66 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 125
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 126 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 185
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 186 RPRKARKL 193
>gi|108773064|ref|YP_635973.1| ribosomal protein S11 [Scenedesmus obliquus]
gi|122231589|sp|Q1KVV1|RR11_SCEOB RecName: Full=30S ribosomal protein S11, chloroplastic
gi|88696630|gb|ABD48256.1| ribosomal protein S11 [Scenedesmus obliquus]
Length = 130
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIR-NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + ++ + +K G ++ + +NT IT+ + G + WSS GF G RK +
Sbjct: 1 MARQTRKVSPTKIKKRTYRGIVYIQAGHHNTIITLANLRGEVLCWSSAGACGFRGKRKAT 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
FAA+ A + + K++ ++ ++ V+G G GR++A+R + G + I + T I HN
Sbjct: 61 TFAAKKAAEVVAKKSREFALNEAKILVTGPGQGRETAIREIFKAGIKVNVIREKTGIPHN 120
Query: 120 GCRPRKRRRI 129
GCRP K+RR+
Sbjct: 121 GCRPPKKRRV 130
>gi|315229894|ref|YP_004070330.1| 30S ribosomal protein S14e (S11p) [Thermococcus barophilus MP]
gi|315182922|gb|ADT83107.1| SSU ribosomal protein S14e (S11p) [Thermococcus barophilus MP]
Length = 136
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+K G AH+ S++NNT I ITD G TI+ S +V + + SP+AA +A +
Sbjct: 8 KKKEKWGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAAKRAA 67
Query: 72 AKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
+A G+ + +KV G G +A+RAL G I + DVT I H+G RP
Sbjct: 68 EEALEKGIVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 127
Query: 124 R 124
+
Sbjct: 128 K 128
>gi|297517821|ref|ZP_06936207.1| 30S ribosomal protein S11 [Escherichia coli OP50]
Length = 83
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFT 106
GF GSRK++PFAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF
Sbjct: 1 AGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFR 60
Query: 107 IVSICDVTMIAHNGCRPRKRRRI 129
I +I DVT I HNGCRP K+RR+
Sbjct: 61 ITNITDVTPIPHNGCRPPKKRRV 83
>gi|159474788|ref|XP_001695507.1| mitochondrial ribosomal protein S11 [Chlamydomonas reinhardtii]
gi|158275990|gb|EDP01765.1| mitochondrial ribosomal protein S11 [Chlamydomonas reinhardtii]
Length = 127
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 75/127 (59%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ R + + G H+ +T NN +T+TD G ++S VVG+ GSRK+ P A
Sbjct: 1 RKVVSERRAGQLGALEGIVHIQNTLNNIILTLTDKQGLIKTYTSAGVVGYKGSRKSQPVA 60
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
A+ A ++ + +A G SS++V++ G G+ + A+ +L A G TI S+ DVT + +NGCR
Sbjct: 61 AEKAAEELARRALKLGYSSVQVRLKGAGSNKQYAVTSLAAAGLTITSLADVTPVPYNGCR 120
Query: 123 PRKRRRI 129
K+RR+
Sbjct: 121 LPKKRRV 127
>gi|294495899|ref|YP_003542392.1| 30S ribosomal protein S11P [Methanohalophilus mahii DSM 5219]
gi|292666898|gb|ADE36747.1| SSU ribosomal protein S11P [Methanohalophilus mahii DSM 5219]
Length = 126
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
N + AH+ +FNNT IT+TD G TIA SS +V + ++SP+ A +
Sbjct: 3 NGIWAVAHIKCSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADT 62
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
++ G+ + ++V G G +A+RA G I I DVT + H+G RP
Sbjct: 63 LRDKGVEGVHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPIG 122
Query: 126 RRRI 129
RR+
Sbjct: 123 GRRV 126
>gi|77414959|ref|ZP_00791052.1| ribosomal protein S11 [Streptococcus agalactiae 515]
gi|77158988|gb|EAO70206.1| ribosomal protein S11 [Streptococcus agalactiae 515]
Length = 97
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 53/96 (55%), Positives = 70/96 (72%)
Query: 34 ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGR 93
ITD HGN +AWSS +GF GSRK++PFAAQ+A + + AQ HG+ ++EV V G G+GR
Sbjct: 2 ITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGR 61
Query: 94 DSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+SA+RAL A G + +I DVT + HNG RP KRRR+
Sbjct: 62 ESAIRALAAAGLEVTAIRDVTPVPHNGARPXKRRRV 97
>gi|291403260|ref|XP_002717846.1| PREDICTED: ribosomal protein S14-like [Oryctolagus cuniculus]
Length = 179
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ ++FN+T + +TD G TI + + + ++SP+AA +A D + + +
Sbjct: 55 VFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 114
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 115 ELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 164
>gi|291240571|ref|XP_002740184.1| PREDICTED: mitochondrial ribosomal protein S11-like [Saccoglossus
kowalevskii]
Length = 161
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 65/110 (59%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ ST+NNT +TD ++ +S GF +RK + AAQ A +AKA + G+
Sbjct: 52 IVHIKSTYNNTHFHVTDCSYKSLVRTSCGTEGFKNARKATGVAAQTAGIAAAAKAIDKGV 111
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ V + GLG GR S+++ L+ G I+SI D T + +NGCRPRK RR+
Sbjct: 112 KYVRVVIKGLGPGRQSSIKGLQMGGLDIISITDNTPVPNNGCRPRKARRL 161
>gi|119622407|gb|EAX02002.1| mitochondrial ribosomal protein S11, isoform CRA_d [Homo sapiens]
Length = 159
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 32 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 91
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 92 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 151
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 152 RPRKARKL 159
>gi|242398332|ref|YP_002993756.1| 30S ribosomal protein S11P [Thermococcus sibiricus MM 739]
gi|259494638|sp|C6A1B2|RS11_THESM RecName: Full=30S ribosomal protein S11P
gi|242264725|gb|ACS89407.1| 30S ribosomal protein S11P [Thermococcus sibiricus MM 739]
Length = 139
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + + ++++ G AH+ +++NNT I ITD G TI+ S +V + ++S
Sbjct: 1 MSEEQQTVNIKKKEK--WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESS 58
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G++ + +KV G G +A+RAL G I +
Sbjct: 59 PYAAMIAARRAAEEAMEKGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRVE 118
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 119 DVTPIPHDGTRPK 131
>gi|332029815|gb|EGI69684.1| 30S ribosomal protein S11, chloroplastic [Acromyrmex echinatior]
Length = 212
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 65/110 (59%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ST NNT +T+T+ +G + S GF ++K + AAQ A + +G+
Sbjct: 103 IVNIKSTPNNTIMTLTNFNGKVLLLHSAGTEGFKNAKKGTNVAAQQAAVTLGNRVLEYGV 162
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+++ ++V G+G GR S+++ + +G I+SI D T ++ N RPRK+RRI
Sbjct: 163 NTVRIRVQGIGPGRMSSIKGFQMVGLNIISITDDTRVSWNPPRPRKQRRI 212
>gi|160872370|ref|ZP_02062502.1| ribosomal protein S11 [Rickettsiella grylli]
gi|159121169|gb|EDP46507.1| ribosomal protein S11 [Rickettsiella grylli]
Length = 147
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + R R ++ + H+ ++FNNT I I G+T+ SS F G++K +
Sbjct: 14 MAERAGSHRKR-KEIVPDAIVHLSTSFNNTIICI-RKGGDTLGISSAGACDFKGTKKGTA 71
Query: 61 FAAQVATDDCSAKAQN-------HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDV 113
FAA+VA + KA + H + +EV++ G G G + A+ AL+ + I ++
Sbjct: 72 FAARVAFEKAIEKAVDKYKSKYKHNLGRVEVRIKGPGQGSEQAIMALKNKDIEVTQILNI 131
Query: 114 TMIAHNGCRPRKRRRI 129
T + HNGCRP KRRR+
Sbjct: 132 TGVPHNGCRPPKRRRV 147
>gi|15420208|gb|AAK97314.1|AF320777_1 cervical cancer proto-oncogene 2 [Homo sapiens]
gi|15214711|gb|AAH12489.1| Mitochondrial ribosomal protein S11 [Homo sapiens]
gi|119622404|gb|EAX01999.1| mitochondrial ribosomal protein S11, isoform CRA_a [Homo sapiens]
Length = 193
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 66 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 125
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 126 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 185
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 186 RPRKARKL 193
>gi|282164927|ref|YP_003357312.1| 30S ribosomal protein S11P [Methanocella paludicola SANAE]
gi|282157241|dbj|BAI62329.1| 30S ribosomal protein S11P [Methanocella paludicola SANAE]
Length = 130
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
AH+ S+FNNT IT+TD G T+A +S +V ++SP+AA + + + +
Sbjct: 7 WAVAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQARNESSPYAAMQMAANVAEQIKA 66
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + +KV G G +A+R+L G I I DVT I H+G R +R
Sbjct: 67 KGIMGVHIKVRAPGGNRQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGTRAPGGKR 126
>gi|10438928|dbj|BAB15381.1| unnamed protein product [Homo sapiens]
gi|62897425|dbj|BAD96653.1| mitochondrial ribosomal protein S11 isoform a variant [Homo
sapiens]
Length = 194
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 127 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 186
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 187 RPRKARKL 194
>gi|195038696|ref|XP_001990791.1| GH19559 [Drosophila grimshawi]
gi|193894987|gb|EDV93853.1| GH19559 [Drosophila grimshawi]
Length = 203
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ SAKA G
Sbjct: 94 ICNIRVSPNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAVSISAKAVELGW 153
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 154 KTVRVKVRGLGPGRMSAIKGLQVGGLNIVSITDNTPVSWNPPRPRKQR 201
>gi|297618744|ref|YP_003706849.1| ribosomal protein S11P [Methanococcus voltae A3]
gi|297377721|gb|ADI35876.1| ribosomal protein S11P [Methanococcus voltae A3]
Length = 124
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ +++NNT + +TD G TIA S ++ + ++SP+AA A + ++
Sbjct: 5 WGVVHIYASYNNTILHVTDVTGSETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLIRD 64
Query: 77 HGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + VKV G G G +A+RAL G I I D T I H+G P+++ R
Sbjct: 65 KGIDHVHVKVRGAGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGTTPKRKNR 124
>gi|16554609|ref|NP_073750.2| 28S ribosomal protein S11, mitochondrial isoform a [Homo sapiens]
gi|21263985|sp|P82912|RT11_HUMAN RecName: Full=28S ribosomal protein S11, mitochondrial;
Short=MRP-S11; Short=S11mt; AltName: Full=Cervical
cancer proto-oncogene 2 protein; Short=HCC-2; Flags:
Precursor
gi|13620889|dbj|BAB40997.1| mitochondrial ribosomal protein S11 [Homo sapiens]
gi|21619066|gb|AAH32378.1| Mitochondrial ribosomal protein S11 [Homo sapiens]
gi|119622405|gb|EAX02000.1| mitochondrial ribosomal protein S11, isoform CRA_b [Homo sapiens]
gi|123981366|gb|ABM82512.1| mitochondrial ribosomal protein S11 [synthetic construct]
gi|123996209|gb|ABM85706.1| mitochondrial ribosomal protein S11 [synthetic construct]
gi|189067861|dbj|BAG37799.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 127 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 186
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 187 RPRKARKL 194
>gi|62897865|dbj|BAD96872.1| mitochondrial ribosomal protein S11 isoform a variant [Homo
sapiens]
Length = 194
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 127 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 186
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 187 RPRKARKL 194
>gi|126179745|ref|YP_001047710.1| 30S ribosomal protein S11P [Methanoculleus marisnigri JR1]
gi|152060791|sp|A3CWH8|RS11_METMJ RecName: Full=30S ribosomal protein S11P
gi|125862539|gb|ABN57728.1| SSU ribosomal protein S11P [Methanoculleus marisnigri JR1]
Length = 129
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT IT+TD G T+ SS +V ++SP+AA + A++
Sbjct: 6 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQNARD 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
G++ + VKV G G +A+RAL G I I DVT + H+
Sbjct: 66 KGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHD 116
>gi|24212383|sp|Q9DCA2|RT11_MOUSE RecName: Full=28S ribosomal protein S11, mitochondrial;
Short=MRP-S11; Short=S11mt; Flags: Precursor
gi|20381440|gb|AAH28279.1| Mitochondrial ribosomal protein S11 [Mus musculus]
Length = 191
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 64 PGQESSLQWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 123
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 124 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 183
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 184 RPRKARRL 191
>gi|195451635|ref|XP_002073010.1| GK13384 [Drosophila willistoni]
gi|194169095|gb|EDW83996.1| GK13384 [Drosophila willistoni]
Length = 204
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 95 ICNIRVSSNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAVSISNKAIELGW 154
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 155 KTIRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTPVSWNPPRPRKQR 202
>gi|74147500|dbj|BAE38655.1| unnamed protein product [Mus musculus]
Length = 191
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 64 PGQESSLQWAGMKFEEVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 123
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 124 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 183
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 184 RPRKARRL 191
>gi|13620891|dbj|BAB40998.1| mitochondrial ribosomal protein S11 [Mus musculus]
Length = 175
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 48 PGQESSLQWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 107
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 108 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 167
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 168 RPRKARRL 175
>gi|124486065|ref|YP_001030681.1| 30S ribosomal protein S11P [Methanocorpusculum labreanum Z]
gi|152060790|sp|A2SSV8|RS11_METLZ RecName: Full=30S ribosomal protein S11P
gi|124363606|gb|ABN07414.1| SSU ribosomal protein S11P [Methanocorpusculum labreanum Z]
Length = 131
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT IT+TD G TI SS +V ++SP+AA + + +++
Sbjct: 8 WGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIAQASKD 67
Query: 77 HGMSSLEVKVSGLGAGRD--------SALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G++ L ++V G GR +A+RAL G I I DVT + H+ R +
Sbjct: 68 KGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDSIRAK 123
>gi|13543047|gb|AAH05701.1| Mrps11 protein [Mus musculus]
Length = 181
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 54 PGQESSLQWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 113
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 114 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 173
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 174 RPRKARRL 181
>gi|150399383|ref|YP_001323150.1| 30S ribosomal protein S11P [Methanococcus vannielii SB]
gi|171460839|sp|A6UPW6|RS11_METVS RecName: Full=30S ribosomal protein S11P
gi|150012086|gb|ABR54538.1| ribosomal protein S11 [Methanococcus vannielii SB]
Length = 124
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ +++NNT + +TD G TIA S ++ + ++SP+AA A + ++
Sbjct: 5 WGLVHIYASYNNTILHVTDVTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIAELMRD 64
Query: 77 HGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + VKV G G +A+RAL G I I D T I H+G P+++ R
Sbjct: 65 KGIDQVHVKVRAAGGQKSKNPGPGAQAAIRALSRAGIKIGRIEDATPIPHDGTTPKRKNR 124
>gi|219117562|ref|XP_002179574.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408627|gb|EEC48560.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 145
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 21 VFGVAHLFASFNDTFVHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMLAAQDVAVRCK 80
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +KV G G G SALRAL G I I DVT I
Sbjct: 81 ELGITALHIKVRGTGGNKSKSPGPGAQSALRALARNGMKIGRIEDVTPIP 130
>gi|61369149|gb|AAX43292.1| ribosomal protein S14 [synthetic construct]
Length = 152
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|88608270|ref|YP_506179.1| 30S ribosomal protein S11 [Neorickettsia sennetsu str. Miyayama]
gi|123750028|sp|Q2GEB7|RS11_NEOSM RecName: Full=30S ribosomal protein S11
gi|88600439|gb|ABD45907.1| ribosomal protein S11 [Neorickettsia sennetsu str. Miyayama]
Length = 120
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 70/111 (63%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
RE+K+IVSG AHV+ TFNN I++TD GN W+S VGF G++K++ +AAQ
Sbjct: 2 REKKSIVSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNKKSTAYAAQSVATTL 61
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
K + G+ L V +SG R++ALRA+R G I+S+ D+T + HNG
Sbjct: 62 MTKLKRIGLKILNVHLSGSNPIREAALRAIRNSGIVIISLQDMTPVPHNGV 112
>gi|563204|gb|AAB17599.1| ribosomal protein S11 [Mycobacterium bovis]
gi|1589488|prf||2211287E ribosomal protein S11
Length = 140
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 67/94 (71%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ + R RE+KN+ G AH+ STFNNT +TITDP GN I W+S V F GSRK++PF
Sbjct: 12 ARKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGNVIGWASSGHVVFKGSRKSTPF 71
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDS 95
AAQ+A ++ + KAQ+HG+ ++V V G G+GR++
Sbjct: 72 AAQLAAENPARKAQDHGVRKVDVFVKGPGSGREN 105
>gi|296084888|emb|CBI28297.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 42 MSRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 101
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 102 VKADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALAR 161
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 162 SGMRIGRIEDVTPIP 176
>gi|305662633|ref|YP_003858921.1| SSU ribosomal protein S11P [Ignisphaera aggregans DSM 17230]
gi|304377202|gb|ADM27041.1| SSU ribosomal protein S11P [Ignisphaera aggregans DSM 17230]
Length = 133
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ ++FNNT I ITD G T+A S +V + K SP+AA + +
Sbjct: 6 RELKWGIAHIYASFNNTIIHITDLSGAETVARGSGGMVVRADREKPSPYAAMMVAYRVAQ 65
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
++ G++++ +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 ESMEKGVTAIHIKVRAPGGHGPKIPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 120
>gi|170650663|ref|NP_080774.2| 28S ribosomal protein S11, mitochondrial precursor [Mus musculus]
gi|74207412|dbj|BAE30886.1| unnamed protein product [Mus musculus]
gi|148675144|gb|EDL07091.1| mitochondrial ribosomal protein S11, isoform CRA_b [Mus musculus]
Length = 191
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 64 PGQESSLQWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 123
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 124 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 183
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 184 RPRKARRL 191
>gi|18978020|ref|NP_579377.1| 30S ribosomal protein S11P [Pyrococcus furiosus DSM 3638]
gi|48474887|sp|Q8U0E3|RS11_PYRFU RecName: Full=30S ribosomal protein S11P
gi|18893803|gb|AAL81772.1| SSU ribosomal protein S11P [Pyrococcus furiosus DSM 3638]
Length = 137
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + I+ +E+ G AH+ S+FNNT I ITD G TI+ S +V + + S
Sbjct: 1 MSEEQVNIKKKEK----WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPS 56
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G+ + ++V G G +A+RAL G I +
Sbjct: 57 PYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVE 116
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 117 DVTPIPHDGTRPK 129
>gi|195394344|ref|XP_002055805.1| GJ10570 [Drosophila virilis]
gi|194142514|gb|EDW58917.1| GJ10570 [Drosophila virilis]
Length = 160
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S V GF +RK + AAQ S KA G
Sbjct: 51 ICNIRVSPNNTIISVTDYKGVPRLIRSCGVEGFKNTRKGTNIAAQATAVSISGKAVELGW 110
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 111 KTIRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTPVSWNPPRPRKQR 158
>gi|12833378|dbj|BAB22503.1| unnamed protein product [Mus musculus]
Length = 191
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 64 PGQESSLQWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGI 123
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 124 AAQTAGIAAAAKATGKGVTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 183
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 184 RPRKARRL 191
>gi|57641439|ref|YP_183917.1| 30S ribosomal protein S11P [Thermococcus kodakarensis KOD1]
gi|73917911|sp|Q5JJF3|RS11_PYRKO RecName: Full=30S ribosomal protein S11P
gi|57159763|dbj|BAD85693.1| SSU ribosomal protein S11P [Thermococcus kodakarensis KOD1]
Length = 140
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 1 MPKSPSR---IRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSR 56
M + + I+ +E+ G AH+ S++NNT I ITD G TI+ S +V +
Sbjct: 1 MSEEQTTQVNIKKKEK----WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRD 56
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIV 108
+ SP+AA +A + +A G++ + +KV G G +A+RAL G I
Sbjct: 57 EPSPYAAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIG 116
Query: 109 SICDVTMIAHNGCRPR 124
+ DVT I H+G RP+
Sbjct: 117 RVEDVTPIPHDGTRPK 132
>gi|330506855|ref|YP_004383283.1| 30S ribosomal protein S11 [Methanosaeta concilii GP-6]
gi|328927663|gb|AEB67465.1| ribosomal protein S11 [Methanosaeta concilii GP-6]
Length = 129
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ S+FNNT ITITD G T+A S +V + ++SP+ A + ++
Sbjct: 6 WGIAHIFSSFNNTIITITDQTGAETLAKISGGMVVKAARDESSPYTAMQMAMQVADAVKD 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRP---RK 125
G+ + VKV G G +A+RAL G I I D T I H+G +P ++
Sbjct: 66 KGIVGVHVKVRAPGGNQQRSPGPGAQAAIRALARAGLRIGRIEDATPIPHDGTKPRGGKR 125
Query: 126 RRRI 129
RR+
Sbjct: 126 GRRV 129
>gi|256709248|gb|ACV21003.1| small subunit ribosomal protein 14 [Oigolaimella attenuata]
Length = 144
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ + + G+++L +K+ G G SALRAL G I I DVT I + C
Sbjct: 74 VAERCKQLGINALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCC 133
>gi|194742483|ref|XP_001953732.1| GF17084 [Drosophila ananassae]
gi|190626769|gb|EDV42293.1| GF17084 [Drosophila ananassae]
Length = 199
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ SAKA G
Sbjct: 90 ICNIRVSSNNTIISVTDYKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVSISAKAVELGW 149
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 150 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTPVSFNPPRPRKQR 197
>gi|41152464|ref|NP_956320.1| 40S ribosomal protein S14 [Danio rerio]
gi|37748505|gb|AAH59561.1| Ribosomal protein S14 [Danio rerio]
Length = 151
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + K + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|3097244|emb|CAA69615.1| ribosomal protein S14 [Mus musculus]
Length = 151
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + R ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGREKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|15294039|gb|AAK95196.1|AF402822_1 40S ribosomal protein S14 [Ictalurus punctatus]
Length = 151
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|5032051|ref|NP_005608.1| 40S ribosomal protein S14 [Homo sapiens]
gi|31981100|ref|NP_065625.2| 40S ribosomal protein S14 [Mus musculus]
gi|62859657|ref|NP_001016722.1| hypothetical protein LOC549476 [Xenopus (Silurana) tropicalis]
gi|68160915|ref|NP_001020241.1| 40S ribosomal protein S14 [Homo sapiens]
gi|68160922|ref|NP_001020242.1| 40S ribosomal protein S14 [Homo sapiens]
gi|71895291|ref|NP_001025790.1| 40S ribosomal protein S14 [Gallus gallus]
gi|148222757|ref|NP_001080235.1| ribosomal protein S14 [Xenopus laevis]
gi|317605887|ref|NP_001187077.1| 40S ribosomal protein S14 [Ictalurus punctatus]
gi|57085269|ref|XP_536466.1| PREDICTED: similar to ribosomal protein S14 isoform 1 [Canis
familiaris]
gi|73953666|ref|XP_853559.1| PREDICTED: similar to ribosomal protein S14 isoform 2 [Canis
familiaris]
gi|73953669|ref|XP_867602.1| PREDICTED: similar to ribosomal protein S14 isoform 3 [Canis
familiaris]
gi|73953671|ref|XP_867612.1| PREDICTED: similar to ribosomal protein S14 isoform 4 [Canis
familiaris]
gi|126290594|ref|XP_001369354.1| PREDICTED: similar to 40S ribosomal protein S14 [Monodelphis
domestica]
gi|149567989|ref|XP_001513237.1| PREDICTED: similar to 40S ribosomal protein S14 [Ornithorhynchus
anatinus]
gi|149726729|ref|XP_001503764.1| PREDICTED: similar to ribosomal protein S14 [Equus caballus]
gi|224067701|ref|XP_002198745.1| PREDICTED: similar to 40S ribosomal protein S14 [Taeniopygia
guttata]
gi|291387632|ref|XP_002710354.1| PREDICTED: ribosomal protein S14-like isoform 1 [Oryctolagus
cuniculus]
gi|291387634|ref|XP_002710355.1| PREDICTED: ribosomal protein S14-like isoform 2 [Oryctolagus
cuniculus]
gi|297295462|ref|XP_002804625.1| PREDICTED: 40S ribosomal protein S14-like isoform 2 [Macaca
mulatta]
gi|297295464|ref|XP_001099589.2| PREDICTED: 40S ribosomal protein S14-like isoform 1 [Macaca
mulatta]
gi|297295466|ref|XP_002804626.1| PREDICTED: 40S ribosomal protein S14-like isoform 3 [Macaca
mulatta]
gi|297676413|ref|XP_002816131.1| PREDICTED: 40S ribosomal protein S14-like isoform 1 [Pongo abelii]
gi|297676415|ref|XP_002816132.1| PREDICTED: 40S ribosomal protein S14-like isoform 2 [Pongo abelii]
gi|301765534|ref|XP_002918187.1| PREDICTED: 40S ribosomal protein S14-like isoform 1 [Ailuropoda
melanoleuca]
gi|301765536|ref|XP_002918188.1| PREDICTED: 40S ribosomal protein S14-like isoform 2 [Ailuropoda
melanoleuca]
gi|301765538|ref|XP_002918189.1| PREDICTED: 40S ribosomal protein S14-like isoform 3 [Ailuropoda
melanoleuca]
gi|326928581|ref|XP_003210455.1| PREDICTED: 40S ribosomal protein S14-like isoform 1 [Meleagris
gallopavo]
gi|326928583|ref|XP_003210456.1| PREDICTED: 40S ribosomal protein S14-like isoform 2 [Meleagris
gallopavo]
gi|327265408|ref|XP_003217500.1| PREDICTED: 40S ribosomal protein S14-like [Anolis carolinensis]
gi|50403752|sp|P62263|RS14_HUMAN RecName: Full=40S ribosomal protein S14
gi|50403753|sp|P62264|RS14_MOUSE RecName: Full=40S ribosomal protein S14
gi|50403754|sp|P62265|RS14_CRIGR RecName: Full=40S ribosomal protein S14
gi|187609264|pdb|2ZKQ|KK Chain k, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|7959919|gb|AAF71130.1|AF116721_110 PRO2640 [Homo sapiens]
gi|304525|gb|AAA37016.1| ribosomal protein S14 [Cricetulus griseus]
gi|337499|gb|AAB59505.1| ribosomal protein S14 [Homo sapiens]
gi|387057|gb|AAA37017.1| ribosomal protein S14 [Cricetulus griseus]
gi|12654581|gb|AAH01126.1| Ribosomal protein S14 [Homo sapiens]
gi|12833634|dbj|BAB22604.1| unnamed protein product [Mus musculus]
gi|12847191|dbj|BAB27472.1| unnamed protein product [Mus musculus]
gi|12849159|dbj|BAB28230.1| unnamed protein product [Mus musculus]
gi|12849422|dbj|BAB28334.1| unnamed protein product [Mus musculus]
gi|12859333|dbj|BAB31615.1| unnamed protein product [Mus musculus]
gi|13097294|gb|AAH03401.1| Ribosomal protein S14 [Homo sapiens]
gi|13905004|gb|AAH06784.1| Ribosomal protein S14 [Homo sapiens]
gi|18088991|gb|AAH20515.1| Ribosomal protein S14 [Homo sapiens]
gi|26389553|dbj|BAC25751.1| unnamed protein product [Mus musculus]
gi|27735476|gb|AAH41512.1| Rps14-prov protein [Xenopus laevis]
gi|27781333|gb|AAH42940.1| Ribosomal protein S14 [Mus musculus]
gi|37231722|gb|AAH58472.1| Rps14 protein [Rattus norvegicus]
gi|38571659|gb|AAH62874.1| Ribosomal protein S14 [Mus musculus]
gi|47221346|emb|CAF97264.1| unnamed protein product [Tetraodon nigroviridis]
gi|51980399|gb|AAH81449.1| Ribosomal protein S14 [Mus musculus]
gi|53136692|emb|CAG32675.1| hypothetical protein RCJMB04_32i2 [Gallus gallus]
gi|60417184|emb|CAH57703.1| 40S ribosomal protein S14 [Platichthys flesus]
gi|60688613|gb|AAH91474.1| Ribosomal protein S14 [Homo sapiens]
gi|61358971|gb|AAX41648.1| ribosomal protein S14 [synthetic construct]
gi|74147420|dbj|BAE27580.1| unnamed protein product [Mus musculus]
gi|74212045|dbj|BAE40187.1| unnamed protein product [Mus musculus]
gi|77748236|gb|AAI06305.1| Rps14-prov protein [Xenopus laevis]
gi|119582127|gb|EAW61723.1| ribosomal protein S14, isoform CRA_a [Homo sapiens]
gi|119582128|gb|EAW61724.1| ribosomal protein S14, isoform CRA_a [Homo sapiens]
gi|119582129|gb|EAW61725.1| ribosomal protein S14, isoform CRA_a [Homo sapiens]
gi|119582130|gb|EAW61726.1| ribosomal protein S14, isoform CRA_a [Homo sapiens]
gi|123204259|gb|ABM73530.1| 40S ribosomal protein S14 [Dicentrarchus labrax]
gi|123980122|gb|ABM81890.1| ribosomal protein S14 [synthetic construct]
gi|123994921|gb|ABM85062.1| ribosomal protein S14 [synthetic construct]
gi|134025950|gb|AAI35233.1| hypothetical protein LOC549476 [Xenopus (Silurana) tropicalis]
gi|148677864|gb|EDL09811.1| mCG6028, isoform CRA_a [Mus musculus]
gi|148677865|gb|EDL09812.1| mCG6028, isoform CRA_a [Mus musculus]
gi|148677866|gb|EDL09813.1| mCG6028, isoform CRA_a [Mus musculus]
gi|148677867|gb|EDL09814.1| mCG6028, isoform CRA_a [Mus musculus]
gi|148677868|gb|EDL09815.1| mCG6028, isoform CRA_a [Mus musculus]
gi|149023941|gb|EDL80438.1| rCG63012 [Rattus norvegicus]
gi|149064353|gb|EDM14556.1| rCG46686, isoform CRA_a [Rattus norvegicus]
gi|149064354|gb|EDM14557.1| rCG46686, isoform CRA_a [Rattus norvegicus]
gi|149064355|gb|EDM14558.1| rCG46686, isoform CRA_a [Rattus norvegicus]
gi|149064356|gb|EDM14559.1| rCG46686, isoform CRA_a [Rattus norvegicus]
gi|149064357|gb|EDM14560.1| rCG46686, isoform CRA_a [Rattus norvegicus]
gi|189053306|dbj|BAG35112.1| unnamed protein product [Homo sapiens]
gi|197129122|gb|ACH45620.1| putative ribosomal protein S14 variant 1 [Taeniopygia guttata]
gi|197129124|gb|ACH45622.1| putative ribosomal protein S14 variant 2 [Taeniopygia guttata]
gi|197129125|gb|ACH45623.1| putative ribosomal protein S14 variant 2 [Taeniopygia guttata]
gi|208967326|dbj|BAG73677.1| ribosomal protein S14 [synthetic construct]
gi|302030276|gb|ADK91578.1| ribosomal protein S14 [Ailuropoda melanoleuca]
gi|302030278|gb|ADK91579.1| ribosomal protein S14 [Ailuropoda melanoleuca]
gi|308324387|gb|ADO29328.1| 40S ribosomal protein s14 [Ictalurus punctatus]
gi|328677087|gb|AEB31266.1| 40S ribosomal protein S14 [Epinephelus bruneus]
Length = 151
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|12083607|ref|NP_073163.1| 40S ribosomal protein S14 [Rattus norvegicus]
gi|133785|sp|P13471|RS14_RAT RecName: Full=40S ribosomal protein S14
gi|57129|emb|CAA33143.1| unnamed protein product [Rattus norvegicus]
Length = 151
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + ++++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKDKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|242012371|ref|XP_002426906.1| 40S ribosomal protein S14, putative [Pediculus humanus corporis]
gi|212511135|gb|EEB14168.1| 40S ribosomal protein S14, putative [Pediculus humanus corporis]
Length = 179
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K
Sbjct: 25 EIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 85 CKSLGITALHIKLRATGGNKSKTPGPGAQSALRALARSSMKIGRIEDVTPIP 136
>gi|213511556|ref|NP_001133208.1| ribosomal protein S14-2 [Salmo salar]
gi|213514852|ref|NP_001134254.1| 40S ribosomal protein S14 [Salmo salar]
gi|163658471|gb|ABY28375.1| ribosomal protein S14 [Oncorhynchus masou formosanus]
gi|197632543|gb|ACH70995.1| ribosomal protein S14-1 [Salmo salar]
gi|197632545|gb|ACH70996.1| ribosomal protein S14-2 [Salmo salar]
gi|209731884|gb|ACI66811.1| 40S ribosomal protein S14 [Salmo salar]
gi|223646120|gb|ACN09818.1| 40S ribosomal protein S14 [Salmo salar]
gi|223671967|gb|ACN12165.1| 40S ribosomal protein S14 [Salmo salar]
gi|225704532|gb|ACO08112.1| 40S ribosomal protein S14 [Oncorhynchus mykiss]
gi|225714760|gb|ACO13226.1| 40S ribosomal protein S14 [Esox lucius]
Length = 151
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVIALGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|157820717|ref|NP_001102618.1| 28S ribosomal protein S11, mitochondrial [Rattus norvegicus]
gi|149057230|gb|EDM08553.1| similar to mitochondrial ribosomal protein S11 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 191
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S ++ K AH+ +T+NNT+I + ++A +S GF ++K +
Sbjct: 64 PGQESSLQWAGMKFEEVPIAHIKATYNNTQIQVVSATNTSLARASCGTEGFRNAKKGTGI 123
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +AKA G++ + V V G+G GR SA++ L G ++SI D T + HNGC
Sbjct: 124 AAQTAGIAAAAKATGKGVTHIRVVVKGIGPGRWSAIKGLTMGGLEVISITDNTPVPHNGC 183
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 184 RPRKARRL 191
>gi|61654728|gb|AAX48890.1| S14 [Suberites domuncula]
Length = 150
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M K + R +E +NI V G AH+ ++FN+T + ITD G T+A +
Sbjct: 1 MAK--RKTRQKEEENIQLGPQVAEGELVFGVAHIFASFNDTFVHITDLSGRETVARVTGG 58
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + + + G+++L +K+ G G SALR L
Sbjct: 59 MKVKADRDEASPYAAMLAAQDVAVQCKERGITALHIKLRATGGTRTKTPGPGAQSALRVL 118
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 119 ARAGMKIGRIEDVTPIP 135
>gi|195151601|ref|XP_002016727.1| GL21925 [Drosophila persimilis]
gi|194111784|gb|EDW33827.1| GL21925 [Drosophila persimilis]
Length = 203
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ SAKA G
Sbjct: 94 VCNIRVSPNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAVSISAKAIELGW 153
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 154 KTIRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTPVSWNPPRPRKQR 201
>gi|157109892|ref|XP_001650870.1| mitochondrial ribosomal protein, S11, putative [Aedes aegypti]
gi|108878907|gb|EAT43132.1| mitochondrial ribosomal protein, S11, putative [Aedes aegypti]
Length = 195
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 57/110 (51%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT ITI D G S + GF +RK + AAQ +KA G
Sbjct: 86 ICNIRVSPNNTIITICDAKGTPQFIRSCGIEGFKNTRKGTNIAAQATAISICSKAIERGY 145
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ V V GLG GR SA++ L G IVSI D T ++ N RPRK+R++
Sbjct: 146 KQVRVTVRGLGPGRMSAIKGLEMAGMNIVSITDTTPVSWNPPRPRKQRKL 195
>gi|256709246|gb|ACV21002.1| small subunit ribosomal protein 14 [Myctolaimus sp. RS5442]
Length = 144
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIYASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G++SL +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINSLHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|240047282|ref|YP_002960670.1| 30S ribosomal protein S11 [Mycoplasma conjunctivae HRC/581]
gi|239984854|emb|CAT04844.1| 30S ribosomal protein S11 [Mycoplasma conjunctivae]
Length = 133
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 70/112 (62%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
NI +G H+ S+ NT ++ TD GN I+WSS +GF G++K + +AA +A + + +A
Sbjct: 14 NITTGIVHIHSSHQNTIVSFTDKLGNVISWSSAGHIGFKGTKKKTAYAASLAANAAAERA 73
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ HG+ + V++ G G G+++A + + G I+ + DVT I HNG RP ++
Sbjct: 74 KEHGIKEVIVELKGTGQGKEAAKKQILTAGINIIQVKDVTPIPHNGTRPPRK 125
>gi|328792437|ref|XP_394155.4| PREDICTED: 30S ribosomal protein S11 [Apis mellifera]
Length = 208
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 65/110 (59%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ S+ NNT +++TD G+ I S + GF ++K + AAQ A + NHG+
Sbjct: 99 VINIKSSHNNTIMSLTDFKGSGIILHSAGLEGFKNTKKGTNIAAQQAAITFGTRVLNHGI 158
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++++++ G+G GR A++ L+ IVSI D T ++ N RPRK+RRI
Sbjct: 159 KTVKLRIQGIGPGRMGAIKGLQLTELNIVSITDDTRVSWNPPRPRKQRRI 208
>gi|45358884|ref|NP_988441.1| 30S ribosomal protein S11P [Methanococcus maripaludis S2]
gi|134045317|ref|YP_001096803.1| 30S ribosomal protein S11P [Methanococcus maripaludis C5]
gi|150402491|ref|YP_001329785.1| 30S ribosomal protein S11P [Methanococcus maripaludis C7]
gi|159905735|ref|YP_001549397.1| 30S ribosomal protein S11P [Methanococcus maripaludis C6]
gi|62287443|sp|Q6LXM9|RS11_METMP RecName: Full=30S ribosomal protein S11P
gi|171472891|sp|A6VGQ8|RS11_METM7 RecName: Full=30S ribosomal protein S11P
gi|172044138|sp|A4FWL3|RS11_METM5 RecName: Full=30S ribosomal protein S11P
gi|45047750|emb|CAF30877.1| SSU ribosomal protein S11 [Methanococcus maripaludis S2]
gi|132662942|gb|ABO34588.1| SSU ribosomal protein S11P [Methanococcus maripaludis C5]
gi|150033521|gb|ABR65634.1| ribosomal protein S11 [Methanococcus maripaludis C7]
gi|159887228|gb|ABX02165.1| ribosomal protein S11 [Methanococcus maripaludis C6]
Length = 124
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ +++NNT + +TD G TIA S ++ + ++SP+AA A + ++
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 77 HGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + VKV G G +A+RAL G I I D T I H+G P+++ R
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGTTPKRKNR 124
>gi|254173052|ref|ZP_04879726.1| ribosomal protein S11 [Thermococcus sp. AM4]
gi|214033208|gb|EEB74036.1| ribosomal protein S11 [Thermococcus sp. AM4]
Length = 137
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + ++ +E+ G AH+ S++NNT I ITD G T++ S +V + + S
Sbjct: 1 MTEGQVNLKKKEK----WGVAHIYSSYNNTIIHITDITGAETVSRWSGGMVVKADRDEPS 56
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G + +KV G G +A+RAL G I +
Sbjct: 57 PYAAMIAARRAAEEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVE 116
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 117 DVTPIPHDGTRPK 129
>gi|307106473|gb|EFN54719.1| 40S ribosomal protein S14 [Chlorella variabilis]
Length = 132
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+ +V G AH+ ++FN+T + +TD G T+ + + + ++SP+AA +A D +
Sbjct: 4 KGELVWGVAHIFASFNDTFVHVTDLSGKETLVRVTGGMKVKADRDESSPYAAMLAAQDVA 63
Query: 72 AKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 64 VRCKELGVNALHIKLRATGGNRTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 117
>gi|14520745|ref|NP_126220.1| 30S ribosomal protein S11P [Pyrococcus abyssi GE5]
gi|14591409|ref|NP_143489.1| 30S ribosomal protein S11P [Pyrococcus horikoshii OT3]
gi|48429121|sp|P62010|RS11_PYRAB RecName: Full=30S ribosomal protein S11P
gi|48429122|sp|P62011|RS11_PYRHO RecName: Full=30S ribosomal protein S11P
gi|3258067|dbj|BAA30750.1| 137aa long hypothetical 30S ribosomal protein S11 [Pyrococcus
horikoshii OT3]
gi|5457961|emb|CAB49451.1| rps11P SSU ribosomal protein S11P [Pyrococcus abyssi GE5]
Length = 137
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + I+ +E+ G AH+ S++NNT I ITD G TI+ S +V + + S
Sbjct: 1 MSEEQVNIKKKEK----WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPS 56
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A + +A G+ + ++V G G +A+RAL G I +
Sbjct: 57 PYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVE 116
Query: 112 DVTMIAHNGCRPR 124
DVT I H+G RP+
Sbjct: 117 DVTPIPHDGTRPK 129
>gi|309322229|ref|YP_003934307.1| ribosomal protein S11 [Monsonia speciosa]
gi|197131632|gb|ACH47334.1| ribosomal protein S11 [Monsonia speciosa]
gi|300069322|gb|ADJ66442.1| ribosomal protein S11 [Monsonia speciosa]
Length = 149
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 54/103 (52%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G H+ T NNT +TITD G W+S GF G RK +PFAAQ + G
Sbjct: 34 GIIHIQVTRNNTIVTITDRRGRVAIWASAGACGFKGRRKGTPFAAQTTMEYAIQPLVKRG 93
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
M + V V+G G G+D+A+R + G + D+T + HNGC
Sbjct: 94 MRAANVLVNGSGRGKDAAVRTIFRNGIIPYFVQDMTPLPHNGC 136
>gi|259089456|ref|NP_001158528.1| 40S ribosomal protein S14 [Oncorhynchus mykiss]
gi|225704574|gb|ACO08133.1| 40S ribosomal protein S14 [Oncorhynchus mykiss]
Length = 151
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 1 MPKSPSRIRNRER-----------KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M + + E+ +N+ G H+ ++FN+T + +TD G TI +
Sbjct: 1 MAPREGKEKKEEQVIALGPQVAEGENV-FGVCHIFASFNDTFVHVTDLSGKETICRVTGG 59
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 60 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRAL 119
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 120 ARSGVKIGRIEDVTPIP 136
>gi|198453141|ref|XP_001359085.2| GA18718 [Drosophila pseudoobscura pseudoobscura]
gi|198132228|gb|EAL28228.2| GA18718 [Drosophila pseudoobscura pseudoobscura]
Length = 202
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ SAKA G
Sbjct: 93 VCNIRVSSNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAVSISAKAIELGW 152
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 153 KTIRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTPVSWNPPRPRKQR 200
>gi|324516001|gb|ADY46387.1| 28S ribosomal protein S11 [Ascaris suum]
Length = 210
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ++ NNT +T+TD I ++S ++ GF +RK + A Q + G+
Sbjct: 101 IVYIKASKNNTLVTVTDHKYKIITYTSCRLEGFKNARKKTTIAGQTTGVAAGQRLVRRGI 160
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V+V GLG GR + ++ L G +VSI D T + G RPRK RR+
Sbjct: 161 RTVRVQVKGLGPGRMTCVKGLTVAGVQVVSITDNTPLPELGPRPRKIRRV 210
>gi|304388966|ref|ZP_07371013.1| 30S ribosomal protein S11 [Neisseria meningitidis ATCC 13091]
gi|304337100|gb|EFM03287.1| 30S ribosomal protein S11 [Neisseria meningitidis ATCC 13091]
Length = 88
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 65/88 (73%)
Query: 42 IAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALR 101
++W++ GF GSRK++PFAAQVA + AQ +G+ +LEV++ G G GR+S++RAL
Sbjct: 1 MSWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALN 60
Query: 102 AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+GF I SI DVT + HNGCRP K+RRI
Sbjct: 61 ALGFKITSITDVTPLPHNGCRPPKKRRI 88
>gi|303244309|ref|ZP_07330646.1| ribosomal protein S11P [Methanothermococcus okinawensis IH1]
gi|302485436|gb|EFL48363.1| ribosomal protein S11P [Methanothermococcus okinawensis IH1]
Length = 124
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ +++NNT I +TD G TIA S ++ + ++SP+AA + +
Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIRE 64
Query: 77 HGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + VKV G G +A+RAL G I I D T I H+G P+KR R
Sbjct: 65 KGIEKVHVKVRAQGGNKSKNPGPGAQAAIRALARAGIRIGRIEDATPIPHDGTTPKKRNR 124
>gi|162605868|ref|XP_001713449.1| 40S ribosomal protein S14 [Guillardia theta]
gi|13794381|gb|AAK39758.1|AF083031_115 40S ribosomal protein S14 [Guillardia theta]
Length = 159
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 1 MPKSPSRIRNRERKN--------IVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVG 51
M P I + KN G H+ ++FN+T I +TD G T+ + +
Sbjct: 11 MIFKPKNISQKNLKNQNLKKTTDFNFGVVHIFASFNDTFIHVTDLSGSETLVRRTGGMEV 70
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAI 103
+ ++SP+AA +A + K + G+++L +K+ G G G SA+RAL
Sbjct: 71 KADRDESSPYAAMMAAQKVAEKCRELGINALHIKLRGKGGNSNKSPGPGAQSAIRALARS 130
Query: 104 GFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 131 GIKIGRIEDVTPIP 144
>gi|74226871|dbj|BAE27080.1| unnamed protein product [Mus musculus]
Length = 151
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++ P+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESCPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|116754909|ref|YP_844027.1| 30S ribosomal protein S11P [Methanosaeta thermophila PT]
gi|121694843|sp|A0B9L3|RS11_METTP RecName: Full=30S ribosomal protein S11P
gi|116666360|gb|ABK15387.1| SSU ribosomal protein S11P [Methanosaeta thermophila PT]
Length = 129
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
AH+ S+FNNT ITITD G TIA S +V + ++SP+ A + +A+
Sbjct: 6 WAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQAKA 65
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + VKV G G +A+RAL G I I DVT I H+G +P+ +R
Sbjct: 66 KGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGTKPKGGKR 125
>gi|195107271|ref|XP_001998237.1| GI23856 [Drosophila mojavensis]
gi|193914831|gb|EDW13698.1| GI23856 [Drosophila mojavensis]
Length = 160
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ AKA G
Sbjct: 51 ICNIRVSPNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAVTIGAKAVELGW 110
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVS+ D T ++ N RPRK+R
Sbjct: 111 KTIRVKVRGLGPGRMSAIKGLQMGGLNIVSVTDNTPVSWNPPRPRKQR 158
>gi|116488050|gb|ABJ98607.1| 40S ribosomal protein S14 [Scophthalmus maximus]
Length = 161
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 11 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 68
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 69 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 128
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 129 LARSGMKIGRIEDVTPIP 146
>gi|320163200|gb|EFW40099.1| 40S ribosomal S14 [Capsaspora owczarzaki ATCC 30864]
Length = 157
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 31 ELVFGVAHIYASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVAAR 90
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G + I DVT I
Sbjct: 91 CKELGVTALHIKLRATGGNGTKTPGPGAQSALRALARAGMKLGRIEDVTPIP 142
>gi|194900516|ref|XP_001979803.1| GG21973 [Drosophila erecta]
gi|190651506|gb|EDV48761.1| GG21973 [Drosophila erecta]
Length = 200
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ SAKA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISAKAVELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|148377783|ref|YP_001256659.1| 30S ribosomal protein S11 [Mycoplasma agalactiae PG2]
gi|291320470|ref|YP_003515734.1| 30S ribosomal protein S11 [Mycoplasma agalactiae]
gi|313678391|ref|YP_004056131.1| 30S ribosomal protein S11 [Mycoplasma bovis PG45]
gi|148291829|emb|CAL59219.1| 30S ribosomal protein S11 [Mycoplasma agalactiae PG2]
gi|290752805|emb|CBH40780.1| 30S ribosomal protein S11 [Mycoplasma agalactiae]
gi|312950789|gb|ADR25384.1| ribosomal protein S11 [Mycoplasma bovis PG45]
Length = 133
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 69/108 (63%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G AH+ ST NT +T D GN IAWSS +G+ G++K +P+AA +A S A+ HG
Sbjct: 17 GVAHIHSTNQNTIVTFADELGNVIAWSSSGAIGYKGTKKKTPYAAGLAAQAASEAAKEHG 76
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKR 126
+ S+ V++ G+GAG+D+A + + G T+ I DVT + HNG RP KR
Sbjct: 77 IKSVRVELKGIGAGKDAARKQIEVSGITVTEIKDVTPVPHNGTRPPKR 124
>gi|255565681|ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus communis]
gi|223536918|gb|EEF38556.1| 40S ribosomal protein S14, putative [Ricinus communis]
Length = 150
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKKKTREPKEENVTLGPAIREGEHVFGVAHIYASFNDTFIHVTDLSGRETMVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVTQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|240104024|ref|YP_002960333.1| 30S ribosomal protein S11P [Thermococcus gammatolerans EJ3]
gi|259494637|sp|C5A250|RS11_THEGJ RecName: Full=30S ribosomal protein S11P
gi|239911578|gb|ACS34469.1| SSU ribosomal protein S11P (rps11P) [Thermococcus gammatolerans
EJ3]
Length = 138
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+K G AH+ S++NNT I ITD G T++ S +V + + SP+AA +A +
Sbjct: 10 KKKEKWGVAHIYSSYNNTIIHITDITGAETVSRWSGGMVVKADRDEPSPYAAMIAARRAA 69
Query: 72 AKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
+A G + +KV G G +A+RAL G I + DVT I H+G RP
Sbjct: 70 EEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTRP 129
Query: 124 R 124
+
Sbjct: 130 K 130
>gi|195500111|ref|XP_002097235.1| GE24607 [Drosophila yakuba]
gi|194183336|gb|EDW96947.1| GE24607 [Drosophila yakuba]
Length = 200
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|291393006|ref|XP_002713077.1| PREDICTED: ribosomal protein S14-like [Oryctolagus cuniculus]
Length = 165
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ ++FN+T + +TD G TI + + + ++SP+AA +A D + + +
Sbjct: 41 VFGVCHIFASFNDTFVHVTDRSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 100
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 101 ELGITALHIKLRATGGNRTKTPGPGAQSALRALAHSGMKIGRIEDVTPIP 150
>gi|256709262|gb|ACV21010.1| small subunit ribosomal protein 14 [Tylopharynx sp. WEM-2009]
Length = 144
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G++SL +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINSLHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|195132430|ref|XP_002010646.1| GI21595 [Drosophila mojavensis]
gi|193907434|gb|EDW06301.1| GI21595 [Drosophila mojavensis]
Length = 151
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKLLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|28189929|dbj|BAC56579.1| similar to ribosomal protein S14 [Bos taurus]
Length = 145
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 7 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 64
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 65 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 124
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 125 LARSGMKIGRIEDVTPIP 142
>gi|256709244|gb|ACV21001.1| small subunit ribosomal protein 14 [Neodiplogaster sp. WEM-2009]
Length = 144
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G H+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVVHIYASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|91087153|ref|XP_975332.1| PREDICTED: similar to AGAP003644-PA [Tribolium castaneum]
Length = 204
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
KN+ ++ + NNT IT+TD G S + GF +RK + AAQ K
Sbjct: 91 KNLP--IMNIRVSPNNTIITMTDDKGAVKLLRSCGIEGFKNTRKGTNIAAQATAITIGTK 148
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G+ ++ V+V GLG GR SA++ L+ G IVSI D T ++ N RPRK +++
Sbjct: 149 VLERGIKTVRVRVRGLGPGRMSAIKGLQMSGLEIVSITDSTPVSWNPPRPRKAKKL 204
>gi|145343502|ref|XP_001416360.1| Ribosomal protein S14, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144576585|gb|ABO94653.1| Ribosomal protein S14, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 139
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G T++ + + + ++SP+AA +A D +A+
Sbjct: 13 ELVFGVAHIYASFNDTFVHVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAAR 72
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 73 CKELGITALHIKMRATGGNKTKSPGPGGQSALRALSRSGLKIGRIEDVTPTP 124
>gi|150401522|ref|YP_001325288.1| 30S ribosomal protein S11P [Methanococcus aeolicus Nankai-3]
gi|171460891|sp|A6UW04|RS11_META3 RecName: Full=30S ribosomal protein S11P
gi|150014225|gb|ABR56676.1| ribosomal protein S11 [Methanococcus aeolicus Nankai-3]
Length = 124
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G H+ +++NNT I +TD G TIA S ++ + ++SP+AA + +
Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIRE 64
Query: 77 HGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G+ + +KV G G +A+RAL G I I D T I H+G P+K R
Sbjct: 65 KGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGTTPKKGNR 124
>gi|150984496|gb|ABR87503.1| small subunit ribosomal protein 14 [Pristionchus sp. 15 RS5229]
Length = 144
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G++SL +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINSLHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|316975633|gb|EFV59041.1| ribosomal protein S11 [Trichinella spiralis]
Length = 321
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
+V + NNT+IT TD G ++ + GF +K + A Q KA G+
Sbjct: 86 ICYVKCSKNNTKITFTDSVGRFQVMTTCGLEGFKNCKKKTEVAGQSTGIAAGLKALRRGI 145
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+S V + GLG GR S+++ + G I+SI D T + G RPRK+R
Sbjct: 146 TSARVVLKGLGPGRSSSIKGMALSGLKIISITDDTPLPELGPRPRKQR 193
>gi|307352911|ref|YP_003893962.1| 30S ribosomal protein S11P [Methanoplanus petrolearius DSM 11571]
gi|307156144|gb|ADN35524.1| ribosomal protein S11P [Methanoplanus petrolearius DSM 11571]
Length = 130
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT ITITD G T+ SS +V ++SP+AA + + A++
Sbjct: 7 WGIAHIFASFNNTVITITDLSGAETVTKSSGGMVVKQARNESSPYAAMQMATNVAQAAKD 66
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+ + V+V G G +A+RAL G I I DVT + H+ R +
Sbjct: 67 KGIVGVHVRVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDSIRAK 122
>gi|322800694|gb|EFZ21612.1| hypothetical protein SINV_08953 [Solenopsis invicta]
Length = 214
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 65/110 (59%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ST NNT + TD G +A S + G+ ++K + AAQ A + +G+
Sbjct: 105 VINIKSTPNNTIMNFTDFKGVPLAIHSAGIEGYKNAKKGTNLAAQQAAITFGNRILEYGV 164
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+++ ++V G+GAGR S+++ L+ G IVSI D T ++ N RPRK+RRI
Sbjct: 165 NTVRLRVQGIGAGRMSSIKGLQMTGLNIVSITDDTRVSWNPPRPRKQRRI 214
>gi|77745450|gb|ABB02624.1| ribosomal protein S14-like [Solanum tuberosum]
Length = 150
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRE---------RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E +V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRRTREPKEETVTLGPSVREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|148906184|gb|ABR16248.1| unknown [Picea sitchensis]
gi|224286786|gb|ACN41096.1| unknown [Picea sitchensis]
Length = 151
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G T+A + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGKETMARVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGLKIGRIEDVTPIP 136
>gi|17738009|ref|NP_524382.1| mitochondrial ribosomal protein S11 [Drosophila melanogaster]
gi|7300221|gb|AAF55385.1| mitochondrial ribosomal protein S11 [Drosophila melanogaster]
gi|20177051|gb|AAM12287.1| RE01527p [Drosophila melanogaster]
gi|66803705|gb|AAY56633.1| mitochondrial ribosomal protein S11 [Drosophila melanogaster]
gi|220947756|gb|ACL86421.1| mRpS11-PA [synthetic construct]
Length = 200
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|150984498|gb|ABR87504.1| small subunit ribosomal protein 14 [Koerneria sp. RS1982]
Length = 144
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|17975579|ref|NP_524884.1| ribosomal protein S14a, isoform B [Drosophila melanogaster]
gi|17977696|ref|NP_536352.1| ribosomal protein S14b [Drosophila melanogaster]
gi|24640451|ref|NP_727218.1| ribosomal protein S14a, isoform A [Drosophila melanogaster]
gi|194763635|ref|XP_001963938.1| GF21290 [Drosophila ananassae]
gi|195480294|ref|XP_002101213.1| RpS14a [Drosophila yakuba]
gi|133771|sp|P14130|RS14_DROME RecName: Full=40S ribosomal protein S14
gi|74917201|sp|Q6XI08|RS14A_DROYA RecName: Full=40S ribosomal protein S14a
gi|158297|gb|AAA28852.1| ribosomal protein RSP14A [Drosophila melanogaster]
gi|158298|gb|AAA28853.1| ribosomal protein RSP14B [Drosophila melanogaster]
gi|7290855|gb|AAF46297.1| ribosomal protein S14a, isoform B [Drosophila melanogaster]
gi|7290856|gb|AAF46298.1| ribosomal protein S14a, isoform A [Drosophila melanogaster]
gi|7290857|gb|AAF46299.1| ribosomal protein S14b [Drosophila melanogaster]
gi|17945791|gb|AAL48943.1| RE34379p [Drosophila melanogaster]
gi|38047809|gb|AAR09807.1| similar to Drosophila melanogaster RpS14a [Drosophila yakuba]
gi|38048289|gb|AAR10047.1| similar to Drosophila melanogaster RpS14a [Drosophila yakuba]
gi|190618863|gb|EDV34387.1| GF21290 [Drosophila ananassae]
gi|194188737|gb|EDX02321.1| RpS14a [Drosophila yakuba]
gi|220952120|gb|ACL88603.1| RpS14a-PA [synthetic construct]
Length = 151
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|256709236|gb|ACV20997.1| small subunit ribosomal protein 14 [Mononchoides sp. RS5441]
Length = 144
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G H+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVVHIYASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|264667381|gb|ACY71276.1| ribosomal protein S14 [Chrysomela tremulae]
Length = 151
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKGKVQKEEVQLSLGPQVREGEIVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSNMKIGRIEDVTPIP 136
>gi|91091798|ref|XP_970498.1| PREDICTED: similar to S14e ribosomal protein [Tribolium castaneum]
gi|270000834|gb|EEZ97281.1| hypothetical protein TcasGA2_TC011085 [Tribolium castaneum]
Length = 151
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKGKVQKEEVQVSLGPQVREGEIVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K ++ G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSNMKIGRIEDVTPIP 136
>gi|255710075|gb|ACU30857.1| 40S ribosomal protein S14 [Ochlerotatus triseriatus]
Length = 132
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K
Sbjct: 6 EIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEK 65
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 66 CKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 117
>gi|19528639|gb|AAL90434.1| RH70248p [Drosophila melanogaster]
Length = 178
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 69 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 128
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 129 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 176
>gi|195349201|ref|XP_002041135.1| GM15204 [Drosophila sechellia]
gi|194122740|gb|EDW44783.1| GM15204 [Drosophila sechellia]
Length = 200
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|194897099|ref|XP_001978590.1| GG19671 [Drosophila erecta]
gi|190650239|gb|EDV47517.1| GG19671 [Drosophila erecta]
Length = 151
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|167519138|ref|XP_001743909.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777871|gb|EDQ91487.1| predicted protein [Monosiga brevicollis MX1]
Length = 152
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M + +E++ + V G AH+ ++FN+T + +TD G TI+ +
Sbjct: 1 MAPKKTAAAPKEKEEVTLGPRVADGELVFGVAHIFASFNDTFVHVTDLSGKETISRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + + + G+++L VK+ G G SALRAL
Sbjct: 61 MKVKADRDEASPYAAMLAAQDVAERCKQIGINALHVKLRATGGNRTKTPGPGAQSALRAL 120
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 ARAGMKIGRIEDVTPIP 137
>gi|150984492|gb|ABR87501.1| small subunit ribosomal protein 14 [Pristionchus sp. 13 RS5231]
Length = 144
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G++SL +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINSLHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|291383383|ref|XP_002708285.1| PREDICTED: ribosomal protein S14-like [Oryctolagus cuniculus]
Length = 204
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ ++FN+T + +TD G TI + + + ++SP+AA +A D + + +
Sbjct: 80 VFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 139
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 140 ELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 189
>gi|160948210|emb|CAO94706.1| putative ribosomal protein S14 [Pomphorhynchus laevis]
Length = 140
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 1 MPKSPSRIRNRERKNIV-----------SGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M + +E I G AH+ ++FN+T + +TD G TI +
Sbjct: 1 MGPRKQKGEKKEETVITLGPVIADGENLFGVAHIFASFNDTFVHVTDLSGQETICRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + K + G ++L +K+ G G SALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVAEKCKALGFTALHIKLRATGGNKSKTPGPGAQSALRAL 120
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 ARSGLKIGRIEDVTPIP 137
>gi|195169445|ref|XP_002025532.1| GL15135 [Drosophila persimilis]
gi|198470570|ref|XP_002133506.1| GA22775 [Drosophila pseudoobscura pseudoobscura]
gi|194109011|gb|EDW31054.1| GL15135 [Drosophila persimilis]
gi|198145514|gb|EDY72134.1| GA22775 [Drosophila pseudoobscura pseudoobscura]
Length = 151
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|150984478|gb|ABR87494.1| small subunit ribosomal protein 14 [Pristionchus sp. 6 RS5101]
Length = 144
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|150984464|gb|ABR87487.1| small subunit ribosomal protein 14 [Pristionchus maupasi]
gi|150984472|gb|ABR87491.1| small subunit ribosomal protein 14 [Pristionchus sp. 3 CZ3975]
gi|150984488|gb|ABR87499.1| small subunit ribosomal protein 14 [Pristionchus sp. 11 RS5228]
gi|150984490|gb|ABR87500.1| small subunit ribosomal protein 14 [Pristionchus americanus]
Length = 144
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|307173050|gb|EFN64186.1| 30S ribosomal protein S11, chloroplastic [Camponotus floridanus]
Length = 213
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 63/110 (57%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ S+ NNT + TD G I + + GF ++K + A Q A +++ ++G+
Sbjct: 104 IVNIKSSPNNTIFSFTDSKGLVIMTHTAGIEGFKNAKKGTNIAGQQAAITLASRILDYGV 163
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +++ G+GAGR S+++ + G ++SI D T ++ RPRK+RR+
Sbjct: 164 NMVRIRIQGIGAGRMSSIKGFQMAGLNVISITDATRVSWCPPRPRKQRRV 213
>gi|302851191|ref|XP_002957120.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300257527|gb|EFJ41774.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 153
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 2 PKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
PK ++ + ++ + V G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 3 PKKSAKADDAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 62
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 63 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 122
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 123 RAGMKIGRIEDVTPIP 138
>gi|131772|sp|P19950|RS141_MAIZE RecName: Full=40S ribosomal protein S14; AltName: Full=Clone MCH1
Length = 149
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 1 MPKSPSRIRNRERK--------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVG 51
M + +R E V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVLGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 60
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAI 103
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 120
Query: 104 GFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 GMKIGRIEDVTPVP 134
>gi|156386752|ref|XP_001634075.1| predicted protein [Nematostella vectensis]
gi|156221154|gb|EDO42012.1| predicted protein [Nematostella vectensis]
Length = 153
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M + +E +NI V G AH+ ++FN+T + +TD G TI+ +
Sbjct: 1 MAPRKGKKEVKEEQNISLGPQVVGEGELVFGVAHIFASFNDTFVHVTDLSGRETISRVTG 60
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + SP+AA +A D +A+ + G+++L +K+ G G SALRA
Sbjct: 61 GMKVKADRDEASPYAAMLAAQDVAARCKEIGITALHIKLRATGGNKTKTPGPGAQSALRA 120
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 121 LARSGMKIGRIEDVTPIP 138
>gi|256709240|gb|ACV20999.1| small subunit ribosomal protein 14 [Diplogasteroides sp. 1 RS5444]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 129
>gi|256709234|gb|ACV20996.1| small subunit ribosomal protein 14 [Rhabditidoides sp. RS5443]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|195570225|ref|XP_002103109.1| mRpS11 [Drosophila simulans]
gi|194199036|gb|EDX12612.1| mRpS11 [Drosophila simulans]
Length = 200
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD G S + GF +RK + AAQ S KA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|150984462|gb|ABR87486.1| small subunit ribosomal protein 14 [Pristionchus pacificus]
gi|150984466|gb|ABR87488.1| small subunit ribosomal protein 14 [Pristionchus lheritieri]
gi|150984468|gb|ABR87489.1| small subunit ribosomal protein 14 [Pristionchus entomophagus]
gi|150984470|gb|ABR87490.1| small subunit ribosomal protein 14 [Pristionchus uniformis]
gi|150984474|gb|ABR87492.1| small subunit ribosomal protein 14 [Pristionchus sp. 4 RS5050]
gi|150984480|gb|ABR87495.1| small subunit ribosomal protein 14 [Pristionchus marianneae]
gi|150984484|gb|ABR87497.1| small subunit ribosomal protein 14 [Pristionchus pseudaerivorus]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|50344488|emb|CAH04330.1| S14e ribosomal protein [Dascillus cervinus]
Length = 151
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKGKVQKEEVQVSLGPQVREGEIVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKALGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSNMKIGRIEDVTPIP 136
>gi|150984486|gb|ABR87498.1| small subunit ribosomal protein 14 [Pristionchus sp. 10 RS5133]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|170042978|ref|XP_001849182.1| mitochondrial ribosomal protein S11 [Culex quinquefasciatus]
gi|167866384|gb|EDS29767.1| mitochondrial ribosomal protein S11 [Culex quinquefasciatus]
Length = 201
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 57/110 (51%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT ITI D G S + GF +RK + AAQ KA G
Sbjct: 92 ICNIRVSPNNTIITICDAKGAPQFIRSCGIEGFKNTRKGTNIAAQATAISICTKAIERGY 151
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V V GLG GR SA++ L G IVSI D T ++ N RPRK+R++
Sbjct: 152 KTVRVTVRGLGPGRMSAIKGLEMAGMNIVSITDSTRVSWNPPRPRKQRKL 201
>gi|159478595|ref|XP_001697388.1| ribosomal protein S14, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|1173201|sp|P46295|RS14_CHLRE RecName: Full=40S ribosomal protein S14
gi|463857|gb|AAB60274.1| ribosomal protein S14 [Chlamydomonas reinhardtii]
gi|158274546|gb|EDP00328.1| ribosomal protein S14 [Chlamydomonas reinhardtii]
Length = 153
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI+ + + + ++SP+AA +A D + K +
Sbjct: 29 VFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 88
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 89 ELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 138
>gi|8954380|ref|NP_059369.1| 30S ribosomal protein S11 [Cyanidioschyzon merolae]
gi|4115793|dbj|BAA36531.1| 30S ribosomal protein S11 [Cyanidioschyzon merolae strain 10D]
Length = 113
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
HV + NN +++TD +GN + W+S GFSG +K + A + + +
Sbjct: 5 IHVYLSLNNIIVSLTDSNGNVLGWASGGSTGFSGFKKITNSAINLIVLKMIDLIRKKKIH 64
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V G+G G ++ + L+ + I DVT I HNGCRP+K+RR+
Sbjct: 65 TVSVFFKGIGKGAETLINLLQRNKINVDIIGDVTEIPHNGCRPKKKRRL 113
>gi|256709250|gb|ACV21004.1| small subunit ribosomal protein 14 [Diplogasteroides magnus]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|126697450|gb|ABO26682.1| ribosomal protein S14 [Haliotis discus discus]
Length = 150
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + P+AA +A D
Sbjct: 21 KEGENV-FGVAHIYASFNDTFVHVTDLSGKETITRVTGGMKVKADRDEAPPYAAMLAAQD 79
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ K +N G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 80 VAEKCKNLGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 135
>gi|150984482|gb|ABR87496.1| small subunit ribosomal protein 14 [Pristionchus pauli]
Length = 144
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|307167768|gb|EFN61230.1| 40S ribosomal protein S14 [Camponotus floridanus]
gi|307182077|gb|EFN69455.1| 40S ribosomal protein S14 [Camponotus floridanus]
gi|307208877|gb|EFN86092.1| 40S ribosomal protein S14 [Harpegnathos saltator]
gi|322778874|gb|EFZ09290.1| hypothetical protein SINV_11943 [Solenopsis invicta]
gi|332020511|gb|EGI60926.1| 40S ribosomal protein S14 [Acromyrmex echinatior]
Length = 151
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
MP +++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MPPKRGKVQKEEVQVSLGPQLREGEVVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K ++ G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|157109309|ref|XP_001650616.1| 40S ribosomal protein S14 [Aedes aegypti]
gi|157109311|ref|XP_001650617.1| 40S ribosomal protein S14 [Aedes aegypti]
gi|122127512|sp|Q1HR24|RS14_AEDAE RecName: Full=40S ribosomal protein S14
gi|94468908|gb|ABF18303.1| 40S ribosomal protein S141 [Aedes aegypti]
gi|108879073|gb|EAT43298.1| 40S ribosomal protein S14 [Aedes aegypti]
gi|108879074|gb|EAT43299.1| 40S ribosomal protein S14 [Aedes aegypti]
Length = 151
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKNKTVKEEVQVSLGPQVREGEIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K ++ G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|225466312|ref|XP_002271159.1| PREDICTED: similar to Os04g0237300, partial [Vitis vinifera]
Length = 274
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 55/93 (59%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+ + + G HV ++FNNT +T+TD G ++WSS GF G+R+ +PFAAQ A +
Sbjct: 56 KSARRVPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGNA 115
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI 103
+ GM EV + G G GRD+ALRA+R
Sbjct: 116 IRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRS 148
>gi|195554484|ref|XP_002076899.1| GD24764 [Drosophila simulans]
gi|194202917|gb|EDX16493.1| GD24764 [Drosophila simulans]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVHLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|115444405|ref|NP_001045982.1| Os02g0162500 [Oryza sativa Japonica Group]
gi|313103636|pdb|3IZ6|K Chain K, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|49389256|dbj|BAD25218.1| putative ribosomal protein S14 [Oryza sativa Japonica Group]
gi|113535513|dbj|BAF07896.1| Os02g0162500 [Oryza sativa Japonica Group]
gi|215765139|dbj|BAG86836.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768151|dbj|BAH00380.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190118|gb|EEC72545.1| hypothetical protein OsI_05960 [Oryza sativa Indica Group]
gi|222622226|gb|EEE56358.1| hypothetical protein OsJ_05486 [Oryza sativa Japonica Group]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A+ D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|312375030|gb|EFR22479.1| hypothetical protein AND_15212 [Anopheles darlingi]
Length = 152
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K
Sbjct: 26 EIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEK 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 86 CKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 137
>gi|152060583|sp|A0RWI9|RS11_CENSY RecName: Full=30S ribosomal protein S11P
Length = 198
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ S++NNT I +TD G T++ SS V + ++SPFAA A + A+
Sbjct: 76 GIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAK 135
Query: 78 GMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G + ++V G G +A+RAL GF I I DVT I H+
Sbjct: 136 GFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHD 185
>gi|208657513|gb|ACI30053.1| 40S ribosomal protein S14 [Anopheles darlingi]
gi|312383499|gb|EFR28564.1| hypothetical protein AND_03376 [Anopheles darlingi]
Length = 152
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K
Sbjct: 26 EIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEK 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 86 CKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 137
>gi|256709258|gb|ACV21008.1| small subunit ribosomal protein 14 [Rhabditoides inermis]
Length = 144
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ + + G+++L +K+ G G SALRAL G I I DVT I +
Sbjct: 74 VAERLKQLGINALHIKIRATGGPKTKTPGPGAQSALRALARSGIKIGRIEDVTPIPSDCT 133
Query: 122 RPR---KRRRI 129
R + + RR+
Sbjct: 134 RRKSGHRGRRL 144
>gi|148907993|gb|ABR17116.1| unknown [Picea sitchensis]
gi|224284315|gb|ACN39893.1| unknown [Picea sitchensis]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 ELGLTALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|212721272|ref|NP_001131240.1| hypothetical protein LOC100192550 [Zea mays]
gi|194690964|gb|ACF79566.1| unknown [Zea mays]
gi|195636204|gb|ACG37570.1| 40S ribosomal protein S14 [Zea mays]
gi|224035641|gb|ACN36896.1| unknown [Zea mays]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I ITD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHITDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|195620750|gb|ACG32205.1| 40S ribosomal protein S14 [Zea mays]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERK---------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|160550163|gb|ABX44786.1| putative 40S ribosomal protein RPS14 [Flustra foliacea]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + ITD G TI + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVAHIFASFNDTFVHITDLSGRETIVRITGGMKVKADRDESSPYAAMLAAQDVAERCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 QLGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|150984494|gb|ABR87502.1| small subunit ribosomal protein 14 [Pristionchus sp. 14 RS5230]
Length = 144
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|164655992|ref|XP_001729124.1| hypothetical protein MGL_3591 [Malassezia globosa CBS 7966]
gi|159103014|gb|EDP41910.1| hypothetical protein MGL_3591 [Malassezia globosa CBS 7966]
Length = 148
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A DC+A+
Sbjct: 22 KIVFGVAHIYASFNDTFVHVTDLTGKETIVRVTGGMKVKADRDESSPYAAMLAAQDCAAR 81
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G++++ +++ G G SALRAL G I I DVT I
Sbjct: 82 CKEVGINAVHIRLRATGGVGPKMPGPGGQSALRALARAGMRIGRIEDVTPIP 133
>gi|62362200|gb|AAX81537.1| S14e ribosomal protein-like protein [Philodina sp. NPS-2005]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 29 GVAHIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCRGL 88
Query: 78 GMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L V++ G G SALRAL G I I DVT I
Sbjct: 89 GITALHVRLRATGGNKTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 136
>gi|58381350|ref|XP_311181.2| AGAP000655-PA [Anopheles gambiae str. PEST]
gi|74921409|sp|Q7QEH1|RS14A_ANOGA RecName: Full=40S ribosomal protein S14a
gi|55242989|gb|EAA06897.2| AGAP000655-PA [Anopheles gambiae str. PEST]
Length = 152
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K
Sbjct: 26 EVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEK 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 86 CKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 137
>gi|58383567|ref|XP_312618.2| AGAP002346-PA [Anopheles gambiae str. PEST]
gi|74921309|sp|Q7QBX2|RS14B_ANOGA RecName: Full=40S ribosomal protein S14b
gi|55242445|gb|EAA08220.2| AGAP002346-PA [Anopheles gambiae str. PEST]
Length = 152
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K
Sbjct: 26 EVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEK 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
++ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 86 CKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 137
>gi|297740141|emb|CBI30323.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + G AH+ ++FN+T I +TD G T+ + +
Sbjct: 14 MSRRKVREPKEENVTLGPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 73
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 74 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 133
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 134 SGMRIGRIEDVTPIP 148
>gi|118488611|gb|ABK96118.1| unknown [Populus trichocarpa]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRRTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHLTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|82623419|gb|ABB87124.1| hypothetical protein [Solanum tuberosum]
gi|83284009|gb|ABC01912.1| ribosomal protein S14-like protein [Solanum tuberosum]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRE---------RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E +V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEETVTLGPATREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|256709260|gb|ACV21009.1| small subunit ribosomal protein 14 [Koerneria sudhausi]
Length = 144
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|192913024|gb|ACF06620.1| ribosomal protein S14 [Elaeis guineensis]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|195396959|ref|XP_002057096.1| GJ16536 [Drosophila virilis]
gi|194146863|gb|EDW62582.1| GJ16536 [Drosophila virilis]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|256709238|gb|ACV20998.1| small subunit ribosomal protein 14 [Diplogasteriana schneideri]
Length = 144
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + +
Sbjct: 18 EIVFGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAER 77
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 78 CKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGVKIGRIEDVTPIP 129
>gi|296191916|ref|XP_002743838.1| PREDICTED: 40S ribosomal protein S14-like [Callithrix jacchus]
Length = 214
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 64 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 121
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 122 GMKVKADRDESSPYAALLAAQDVAQRCKELGITALHIKLQATGGNRTKTPGPGTQSALRA 181
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 182 LACSGMKIGQIEDVTPIP 199
>gi|255557317|ref|XP_002519689.1| 40S ribosomal protein S14, putative [Ricinus communis]
gi|223541106|gb|EEF42662.1| 40S ribosomal protein S14, putative [Ricinus communis]
Length = 150
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKKKTREPKEENVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVTQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|195145699|ref|XP_002013829.1| GL23180 [Drosophila persimilis]
gi|195169443|ref|XP_002025531.1| GL15136 [Drosophila persimilis]
gi|198470568|ref|XP_002133505.1| GA22776 [Drosophila pseudoobscura pseudoobscura]
gi|194102772|gb|EDW24815.1| GL23180 [Drosophila persimilis]
gi|194109010|gb|EDW31053.1| GL15136 [Drosophila persimilis]
gi|198145513|gb|EDY72133.1| GA22776 [Drosophila pseudoobscura pseudoobscura]
Length = 151
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKLLGITALNIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|118481419|gb|ABK92652.1| unknown [Populus trichocarpa]
Length = 150
Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRRTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|112253642|gb|ABI14406.1| 40S ribosomal S14 [Prorocentrum minimum]
Length = 149
Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A D +A+ +
Sbjct: 25 VFGVAHIYASFNDTFVHVTDLSGRETIIRVTGGMKVKADRDESSPYAAMLAAQDVAARCK 84
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 85 ELGITALHIKLRATGGTRTRTPGPGAQSALRALARSGMKIGRIEDVTPIP 134
>gi|223993973|ref|XP_002286670.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977985|gb|EED96311.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 138
Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V AH+ ++FN+T + +TD G T+ + + + ++SP+AA +A D +A+ +
Sbjct: 14 VFAVAHLFASFNDTFVHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMLAAQDVAARCK 73
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +KV G G G SALRAL G I I DVT I
Sbjct: 74 ELGVTALHIKVRGTGGSKSRSPGPGAQSALRALARNGMKIGRIEDVTPIP 123
>gi|318083375|gb|ADV38313.1| putative ribosomal protein S14 [Wolffia arrhiza]
Length = 150
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AHV ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHVFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|291224783|ref|XP_002732381.1| PREDICTED: ribosomal protein S14-like isoform 1 [Saccoglossus
kowalevskii]
gi|291224785|ref|XP_002732382.1| PREDICTED: ribosomal protein S14-like isoform 2 [Saccoglossus
kowalevskii]
gi|291224787|ref|XP_002732383.1| PREDICTED: ribosomal protein S14-like isoform 3 [Saccoglossus
kowalevskii]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M + + E++ V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKGKEKKEEQQIALGPQAVEGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVATKCKEIGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 RSGMKIGRIEDVTPIP 136
>gi|297823427|ref|XP_002879596.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
gi|297325435|gb|EFH55855.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ ++FN+T I +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G SALRAL G I I DVT I
Sbjct: 87 ELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|194696114|gb|ACF82141.1| unknown [Zea mays]
Length = 141
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I ITD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHITDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIAHNGCR 122
G I I DVT + + R
Sbjct: 121 SGMKIGRIEDVTPVPTDSTR 140
>gi|194763637|ref|XP_001963939.1| GF21291 [Drosophila ananassae]
gi|190618864|gb|EDV34388.1| GF21291 [Drosophila ananassae]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALNIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|297833934|ref|XP_002884849.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
gi|297330689|gb|EFH61108.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
Length = 150
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K ++ E + V G H+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|194897104|ref|XP_001978591.1| GG19672 [Drosophila erecta]
gi|190650240|gb|EDV47518.1| GG19672 [Drosophila erecta]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALNIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|242247517|ref|NP_001156053.1| 40S ribosomal protein S14 [Acyrthosiphon pisum]
gi|239788359|dbj|BAH70866.1| ACYPI000383 [Acyrthosiphon pisum]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRE----------RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKGKVQKEEPVVQLGPQIQEGELVYGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKLLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|195438894|ref|XP_002067367.1| GK16381 [Drosophila willistoni]
gi|195438896|ref|XP_002067368.1| GK16382 [Drosophila willistoni]
gi|194163452|gb|EDW78353.1| GK16381 [Drosophila willistoni]
gi|194163453|gb|EDW78354.1| GK16382 [Drosophila willistoni]
Length = 151
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKAPKEEVQVQLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|256709252|gb|ACV21005.1| small subunit ribosomal protein 14 [Acrostichus sp. RS5083]
Length = 144
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D + + +
Sbjct: 20 VFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAERCK 79
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 80 QLGINALHIKLRATGGTKTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|221107701|ref|XP_002154189.1| PREDICTED: similar to 40S ribosomal protein S14 [Hydra
magnipapillata]
Length = 151
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 1 MPKSPSRIRNRER-----------KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M +++ E+ +N+ G AH+ ++FN+T + +TD G TI +
Sbjct: 1 MAPRKGKVQKEEQVIALGPQVADGENV-FGVAHIFASFNDTFVHVTDLSGKETIVRVTGG 59
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + + + G+++L VK+ G G SALRAL
Sbjct: 60 MKVKADRDESSPYAAMLAAQDVAVRCKELGITALHVKLRATGGNRTKTPGPGAQSALRAL 119
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 120 ARAGMKIGRIEDVTPIP 136
>gi|149390859|gb|ABR25447.1| 40S ribosomal protein S14 [Oryza sativa Indica Group]
Length = 145
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 21 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 80
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 81 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVP 130
>gi|302811295|ref|XP_002987337.1| hypothetical protein SELMODRAFT_183051 [Selaginella moellendorffii]
gi|302814961|ref|XP_002989163.1| hypothetical protein SELMODRAFT_184401 [Selaginella moellendorffii]
gi|300143063|gb|EFJ09757.1| hypothetical protein SELMODRAFT_184401 [Selaginella moellendorffii]
gi|300144972|gb|EFJ11652.1| hypothetical protein SELMODRAFT_183051 [Selaginella moellendorffii]
Length = 151
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 5 PSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
R + + +N+ V G AH+ ++FN+T + +TD G T+A + +
Sbjct: 4 KKRTKEVKEENVTLGPSVRDGEQVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVK 63
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIG 104
+ + SP+AA +A D +AK ++ G+++L +K+ G G SALRAL G
Sbjct: 64 ADRDEASPYAAMLAAQDVAAKCKDLGINALHIKLRATGGNKTKQPGPGAQSALRALARSG 123
Query: 105 FTIVSICDVTMIA 117
I I DVT I
Sbjct: 124 MKIGRIEDVTPIP 136
>gi|195055432|ref|XP_001994623.1| GH17341 [Drosophila grimshawi]
gi|193892386|gb|EDV91252.1| GH17341 [Drosophila grimshawi]
Length = 151
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + V G AH+ ++FN+T + ++D G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQLQLGPQVLDGENVFGVAHIYASFNDTFVHVSDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L VK+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKMLGITALHVKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSLKIGRIEDVTPIP 136
>gi|148672594|gb|EDL04541.1| mCG8804 [Mus musculus]
Length = 151
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKKTICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
++ + ++S +AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 RMKVKADRDESSLYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|256709242|gb|ACV21000.1| small subunit ribosomal protein 14 [Micoletzkya sp. WEM-2009]
Length = 144
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHIKLRATGGTKTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|213027590|ref|ZP_03342037.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 73
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
K++PFAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I
Sbjct: 1 KSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPI 60
Query: 117 AHNGCRPRKRRRI 129
HNGCRP K+RR+
Sbjct: 61 PHNGCRPPKKRRV 73
>gi|166952365|gb|ABZ04265.1| ribosomal protein rps14 [Lineus viridis]
Length = 150
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M +++ E+ + V G AH+ ++FN+T + +TD G TI + +
Sbjct: 1 MAPRKGKVQKEEQIQLGPQVTEGENVFGVAHIFASFNDTFVHVTDLSGKETIVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ + SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDEASPYAAMLAAQDVAERCKVLGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|156554906|ref|XP_001602758.1| PREDICTED: similar to CG5184-PA [Nasonia vitripennis]
Length = 212
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ T NNT IT+TD G S GF +RK + AAQ S KAQ+ G+
Sbjct: 103 IFNIKVTPNNTIITLTDFKGGVHILKSCGTEGFRTARKGTNIAAQTTAISISTKAQSIGV 162
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ V++ G+G GR +A++ L+ G IVSI D T ++ RPRK+RR+
Sbjct: 163 RTARVRIRGIGPGRLAAIKGLQMGGTNIVSITDNTHVSWCPPRPRKQRRV 212
>gi|15229775|ref|NP_187758.1| 40S ribosomal protein S14 (RPS14B) [Arabidopsis thaliana]
gi|27734448|sp|Q9CAX6|RS142_ARATH RecName: Full=40S ribosomal protein S14-2
gi|12322890|gb|AAG51428.1|AC008153_1 putative 40S ribosomal protein s14; 67401-66292 [Arabidopsis
thaliana]
gi|21595448|gb|AAM66102.1| putative 40S ribosomal protein S14 [Arabidopsis thaliana]
gi|98961087|gb|ABF59027.1| At3g11510 [Arabidopsis thaliana]
Length = 150
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K ++ E + V G H+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|297816550|ref|XP_002876158.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
gi|297321996|gb|EFH52417.1| 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 1 MPKSPSRIRN---------RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K ++ RE +N+ G H+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTKEPKVETSLGPTVREGENV-FGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 59
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 60 VKADRDESSPYAAMLAAQDVAQRCKELGVTAIHVKLRATGGNKTKTPGPGAQSALRALAR 119
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 120 SGMKIGRIEDVTPIP 134
>gi|4588920|gb|AAD26263.1| ribosomal protein S14 [Stomoxys calcitrans]
gi|224924382|gb|ACN69141.1| 40S ribosomal protein S14 [Stomoxys calcitrans]
Length = 151
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ + E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKAQKEEVQVSLGPQVRDGEFVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|156084712|ref|XP_001609839.1| 40S ribosomal subunit protein S14 [Babesia bovis T2Bo]
gi|154797091|gb|EDO06271.1| 40S ribosomal subunit protein S14, putative [Babesia bovis]
Length = 168
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D
Sbjct: 39 QKGGHVFGVAHIFASFNDTFIHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMMAAQDV 98
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+A+ + G++++ +K+ G G SALR+L G I I DVT I
Sbjct: 99 AARLKELGITAVHIKLRATGGTRSKTPGPGAQSALRSLARSGLKIGRIEDVTPIP 153
>gi|224106672|ref|XP_002314245.1| predicted protein [Populus trichocarpa]
gi|118483965|gb|ABK93870.1| unknown [Populus trichocarpa]
gi|222850653|gb|EEE88200.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|256709254|gb|ACV21006.1| small subunit ribosomal protein 14 [Pseudodiplogasteroides sp.
SB257]
Length = 144
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G++SL +K+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINSLHIKLRATGGTRTKSPGPGGQSALRALARAGMKIGRIEDVTPIP 129
>gi|196010349|ref|XP_002115039.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190582422|gb|EDV22495.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 151
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D +AK +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDEASPYAAMLAAQDVAAKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 EVGVTALHIKLRAPGGNKSKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|219852958|ref|YP_002467390.1| 30S ribosomal protein S11P [Methanosphaerula palustris E1-9c]
gi|219547217|gb|ACL17667.1| ribosomal protein S11 [Methanosphaerula palustris E1-9c]
Length = 131
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV ++FNNT IT+TD G T+ SS +V ++SP+AA D + A +
Sbjct: 8 WGVAHVFASFNNTIITVTDMTGAETVTKSSGGMVVKQDRNESSPYAAMKMAGDVAQAAMD 67
Query: 77 HGMSSLEVKVSGLGAGRD--------SALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G L +KV G G+ +A+RAL G I I DVT + H+ R +
Sbjct: 68 KGFVGLHIKVRAPGRGKQRSPGAGAQAAIRALARAGMRIGRIEDVTPVPHDSIRAK 123
>gi|15227588|ref|NP_181158.1| 40S ribosomal protein S14 (RPS14A) [Arabidopsis thaliana]
gi|27734451|sp|Q9SIH0|RS141_ARATH RecName: Full=40S ribosomal protein S14-1
gi|4678226|gb|AAD26971.1| 40S ribosomal protein S14 [Arabidopsis thaliana]
gi|21593698|gb|AAM65665.1| 40S ribosomal protein S14 [Arabidopsis thaliana]
gi|330254117|gb|AEC09211.1| 40S ribosomal protein S14-1 [Arabidopsis thaliana]
Length = 150
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 1 MPKSPSRIRN----------RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M K ++ RE + + G H+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTKEPKVDVVTLGPSVREGEQV-FGVVHIFASFNDTFIHVTDLSGRETLVRITGGM 59
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 60 KVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALA 119
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 120 RSGMKIGRIEDVTPIP 135
>gi|15231260|ref|NP_190826.1| 40S ribosomal protein S14 (RPS14C) [Arabidopsis thaliana]
gi|27735232|sp|P42036|RS143_ARATH RecName: Full=40S ribosomal protein S14-3
gi|4886269|emb|CAB43407.1| putative ribosomal protein S14 [Arabidopsis thaliana]
gi|16209654|gb|AAL14387.1| AT3g52580/F22O6_40 [Arabidopsis thaliana]
gi|21618105|gb|AAM67155.1| putative ribosomal protein S14 [Arabidopsis thaliana]
gi|21700837|gb|AAM70542.1| AT3g52580/F22O6_40 [Arabidopsis thaliana]
Length = 150
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K ++ E + V G HV ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|124506243|ref|XP_001351719.1| 40S ribosomal protein S14, putative [Plasmodium falciparum 3D7]
gi|23504648|emb|CAD51526.1| 40S ribosomal protein S14, putative [Plasmodium falciparum 3D7]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G++++ +K+ G G SALRAL G I I DVT I
Sbjct: 85 LKELGVTAIHIKLRASGGTKSKTPGPGAQSALRALARSGLKIGRIEDVTPIP 136
>gi|195455120|ref|XP_002074567.1| GK23091 [Drosophila willistoni]
gi|194170652|gb|EDW85553.1| GK23091 [Drosophila willistoni]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKAPKEEVQVQLGPQVRDGELVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDFAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|20094909|ref|NP_614756.1| 30S ribosomal protein S11P [Methanopyrus kandleri AV19]
gi|48474514|sp|Q8TVB9|RS11_METKA RecName: Full=30S ribosomal protein S11P
gi|19888145|gb|AAM02686.1| Ribosomal protein S11 [Methanopyrus kandleri AV19]
Length = 137
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ ++FNNT ITITD G T A S +V + ++SP+AA A + +A
Sbjct: 14 WGIAHIYASFNNTIITITDLTGAETFARWSGGMVVDADREESSPYAAMKAARRAAEEAME 73
Query: 77 HGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G++++ VKV G G +A+RAL G I I DVT I H+
Sbjct: 74 KGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHD 124
>gi|195658349|gb|ACG48642.1| 40S ribosomal protein S14 [Zea mays]
Length = 150
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I ITD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHITDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDZSSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|157690746|tpe|CAL69100.1| TPA: putative 40S ribosomal protein S14 [Spadella cephaloptera]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNIVS------------GRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + + +V G AH+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKQKKEVVEQVVQLGPQVEEGVNVFGVAHIFASFNDTFVHVTDVSGRETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRA 99
+ + + SP+AA +A D + + + G+++L +++ G G SALRA
Sbjct: 59 GMKVKADRDEASPYAAMLAAQDVAERCKQLGITALHIRLRATGGVRTRTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT +
Sbjct: 119 LARSGMKIGRIEDVTPVP 136
>gi|195355992|ref|XP_002044467.1| GM11985 [Drosophila sechellia]
gi|194131632|gb|EDW53674.1| GM11985 [Drosophila sechellia]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I D T I
Sbjct: 121 RSSMKIGRIEDATPIP 136
>gi|72015985|ref|XP_780390.1| PREDICTED: similar to putative ribosomal protein S14e
[Strongylocentrotus purpuratus]
gi|115974576|ref|XP_001178816.1| PREDICTED: similar to putative ribosomal protein S14e
[Strongylocentrotus purpuratus]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAIKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 DLGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|195480291|ref|XP_002101212.1| GE15749 [Drosophila yakuba]
gi|194188736|gb|EDX02320.1| GE15749 [Drosophila yakuba]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + +V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVHLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALNIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|188572393|gb|ACD65103.1| putative 40S ribosomal protein RPS14 [Novocrania anomala]
Length = 144
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + + E+ ++ V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKGKTQTEEKVSLGPQVVEGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ + SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDEASPYAAMLAAQDVAERCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIAHNGCRPR 124
G I I DVT I + R +
Sbjct: 121 SGMKIGRIEDVTPIPSDSTRRK 142
>gi|255070819|ref|XP_002507491.1| ribosomal protein S14 [Micromonas sp. RCC299]
gi|226522766|gb|ACO68749.1| ribosomal protein S14 [Micromonas sp. RCC299]
Length = 151
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + + +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKADRDEASPYAAMLAAQDVAVRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 87 ELGLTALHIKMRATGGNKTKSPGPGGQSALRALSRSGLKIGRIEDVTPVP 136
>gi|66803723|gb|AAY56634.1| mitochondrial ribosomal protein S11 [Drosophila simulans]
Length = 200
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ + NNT I++TD S + GF +RK + AAQ S KA G
Sbjct: 91 ICNIRVSPNNTIISVTDHKEVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGW 150
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ VKV GLG GR SA++ L+ G IVSI D T ++ N RPRK+R
Sbjct: 151 KTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
>gi|242076052|ref|XP_002447962.1| hypothetical protein SORBIDRAFT_06g018900 [Sorghum bicolor]
gi|242093700|ref|XP_002437340.1| hypothetical protein SORBIDRAFT_10g025270 [Sorghum bicolor]
gi|242093716|ref|XP_002437348.1| hypothetical protein SORBIDRAFT_10g025340 [Sorghum bicolor]
gi|241915563|gb|EER88707.1| hypothetical protein SORBIDRAFT_10g025270 [Sorghum bicolor]
gi|241915571|gb|EER88715.1| hypothetical protein SORBIDRAFT_10g025340 [Sorghum bicolor]
gi|241939145|gb|EES12290.1| hypothetical protein SORBIDRAFT_06g018900 [Sorghum bicolor]
Length = 150
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A+ D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|195122504|ref|XP_002005751.1| GI18903 [Drosophila mojavensis]
gi|193910819|gb|EDW09686.1| GI18903 [Drosophila mojavensis]
Length = 151
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + ++SP+AA +A D + + +
Sbjct: 27 VFGIAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAERCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL I I DVT I
Sbjct: 87 ALGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 136
>gi|28436071|gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]
Length = 150
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G H+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G++++ VK+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|289741361|gb|ADD19428.1| ribosomal protein S14b [Glossina morsitans morsitans]
Length = 151
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ + E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKAQKEEVQVSLGPQVRDGEYVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|195381475|ref|XP_002049474.1| GJ20727 [Drosophila virilis]
gi|194144271|gb|EDW60667.1| GJ20727 [Drosophila virilis]
Length = 151
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGENVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAERCKALGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|298711478|emb|CBJ26566.1| 40S ribosomal protein S14 [Ectocarpus siliculosus]
Length = 151
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERKNI----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ E + V G AH+ ++FN+T + ITD G T+ + +
Sbjct: 1 MADKKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 RAGMKIGRIEDVTPIP 136
>gi|197129123|gb|ACH45621.1| putative ribosomal protein S14 variant 1 [Taeniopygia guttata]
Length = 151
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G T I DVT I
Sbjct: 119 LARSGMTPPRIEDVTPIP 136
>gi|318086962|gb|ADV40073.1| 40S ribosomal protein S14 [Latrodectus hesperus]
Length = 151
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 LIGITALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|156095522|ref|XP_001613796.1| 40S ribosomal protein S14-2 [Plasmodium vivax SaI-1]
gi|148802670|gb|EDL44069.1| 40S ribosomal protein S14-2, putative [Plasmodium vivax]
Length = 151
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S++ +K+ G G SALRAL G I I DVT I
Sbjct: 85 LKELGVSAIHIKLRASGGTKSKTPGPGAQSALRALARSGLKIGRIEDVTPIP 136
>gi|151579918|gb|ABS18351.1| 40S ribosomal protein S14 [Artemia franciscana]
Length = 140
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V G AH+ ++FN+T + +TD G TI + +
Sbjct: 1 MAPRKGKVQKEEVQVSLGPQVRDGETVFGVAHIFASFNDTFVHVTDLSGRETICRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D S K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDESSPYAAMLAAQDVSEKCKTLGITALHIKLRATGGNRSKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 RSGMKIGRIEDVTPIP 136
>gi|226530079|ref|NP_001152653.1| 40S ribosomal protein S14 [Zea mays]
gi|195658587|gb|ACG48761.1| 40S ribosomal protein S14 [Zea mays]
Length = 150
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERK---------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRKKTREPKEENVTLGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKKLGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|730633|sp|Q08699|RS14_PODCA RecName: Full=40S ribosomal protein S14
gi|396252|emb|CAA50506.1| 40S ribosomal protein S14 [Podocoryna carnea]
Length = 151
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAVRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 87 EIGITALHVKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|195045745|ref|XP_001992030.1| GH24437 [Drosophila grimshawi]
gi|193892871|gb|EDV91737.1| GH24437 [Drosophila grimshawi]
Length = 151
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGENVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKLLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|260802698|ref|XP_002596229.1| hypothetical protein BRAFLDRAFT_113666 [Branchiostoma floridae]
gi|229281483|gb|EEN52241.1| hypothetical protein BRAFLDRAFT_113666 [Branchiostoma floridae]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + + + + V G AH+ ++FN+T +TD G TI +
Sbjct: 1 MA--PRKGKKEKEEQVISLGPQVAEGENVFGVAHIFASFNDTFCHVTDLSGRETIVLVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + SP+AA +A D +A+ + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDEASPYAAMLAAQDVAARCKEIGITALHIKLRATGGNKTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|241836194|ref|XP_002415092.1| 40S ribosomal protein S14, putative [Ixodes scapularis]
gi|51011526|gb|AAT92172.1| ribosomal protein S14 [Ixodes pacificus]
gi|67084041|gb|AAY66955.1| ribosomal protein S14 [Ixodes scapularis]
gi|215509304|gb|EEC18757.1| 40S ribosomal protein S14, putative [Ixodes scapularis]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL I I DVT I
Sbjct: 87 QVGITALHIKLRATGGTRTKTPGPGAQSALRALARSDMKIGRIEDVTPIP 136
>gi|224114333|ref|XP_002316729.1| predicted protein [Populus trichocarpa]
gi|118485080|gb|ABK94403.1| unknown [Populus trichocarpa]
gi|222859794|gb|EEE97341.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRRTREPKEENVTLGPTVREGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|225463474|ref|XP_002276634.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 150
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|150984476|gb|ABR87493.1| small subunit ribosomal protein 14 [Pristionchus aerivorus]
Length = 144
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN T + ITD G TI + + + + SP+AA +A D
Sbjct: 15 KEGENV-FGVAHIFASFNGTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 73
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L VK+ G G SALRAL G I I DVT I
Sbjct: 74 VAERCKQLGINALHVKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 129
>gi|198433118|ref|XP_002126687.1| PREDICTED: similar to 40S ribosomal protein S14 isoform 2 [Ciona
intestinalis]
gi|198433120|ref|XP_002126624.1| PREDICTED: similar to 40S ribosomal protein S14 isoform 1 [Ciona
intestinalis]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D +A+ +
Sbjct: 27 VFGVAHIYASFNDTFVHVTDLSGKETIVRITGGMKVKADRDEASPYAAMLAAQDVAARCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 EIGINALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|168059990|ref|XP_001781982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666555|gb|EDQ53206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 5 PSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
++R + +N+ V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 4 KKKVRAEKEENVTLGPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVK 63
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIG 104
+ + SP+AA +A D + + + G+++L +K+ G G SALRAL G
Sbjct: 64 ADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 123
Query: 105 FTIVSICDVTMIA 117
I I DVT I
Sbjct: 124 MRIGRIEDVTPIP 136
>gi|268553133|ref|XP_002634550.1| C. briggsae CBR-RPS-14 protein [Caenorhabditis briggsae]
gi|187032718|emb|CAP28192.1| CBR-RPS-14 protein [Caenorhabditis briggsae AF16]
Length = 152
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
++ G AH+ ++FN+T + ITD G TI + + + ++SP+AA +A D + +
Sbjct: 26 ELIFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 86 CKQLGINALHIKLRATGGTRSKTPGPGAQSALRALARAGMKIGRIEDVTPIP 137
>gi|256709256|gb|ACV21007.1| small subunit ribosomal protein 14 [Diplogastrellus gracilis]
Length = 144
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D S + +
Sbjct: 20 VFGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVSERCK 79
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 80 QLGINALHIKLRATGGTRTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 129
>gi|303273594|ref|XP_003056157.1| ribosomal protein S14 [Micromonas pusilla CCMP1545]
gi|226462241|gb|EEH59533.1| ribosomal protein S14 [Micromonas pusilla CCMP1545]
Length = 153
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + + +
Sbjct: 29 VFGVAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKADRDEASPYAAMLAAQDVAVRCK 88
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 89 ELGLTALHIKMRATGGNKTKSPGPGGQSALRALSRSGLKIGRIEDVTPVP 138
>gi|47935073|gb|AAT39883.1| ribosomal protein S14 [Branchiostoma belcheri tsingtauense]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + + + + V G AH+ ++FN+T +TD G TI +
Sbjct: 1 MA--PRKGKKEKEEQVISLGPQVAEGENVFGVAHIFASFNDTFCHVTDLSGRETIVLVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVEADRDEASPYAAMLAAQDVATRCKEIGITALHIKLRATGGNKTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|260908409|gb|ACX53925.1| 40S ribosomal protein S14 [Rhipicephalus sanguineus]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNIVS------------GRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + +E + IVS G AH+ ++FN+T + +TD G TIA +
Sbjct: 1 MA--PRKGKQKEEQPIVSLGPQAIGNENVFGVAHIYASFNDTFVHVTDLSGRETIARVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + SP+AA +A D + K + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDEASPYAAMLAAQDVAEKCKQVGITALHIKLRATGGTRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L I I DVT I
Sbjct: 119 LARSDMKIGRIEDVTPIP 136
>gi|124300813|dbj|BAF45902.1| ribosomal protein S14 [Solea senegalensis]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISFGPQVAEGENVFGVCHIFASFNDTFVHVTDLFGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + P+AA +A D + + + G+++L +K+ G G ALRA
Sbjct: 59 GMKVKADRDELFPYAAMLAAQDVAQRCKELGITALHIKLRAPGGNRTKTPGPGAQFALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LARSGMKIGRIEDVTPIP 136
>gi|45190455|ref|NP_984709.1| AEL152Wp [Ashbya gossypii ATCC 10895]
gi|44983397|gb|AAS52533.1| AEL152Wp [Ashbya gossypii ATCC 10895]
Length = 138
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M K ++ R+ + V G A + ++FN+T + +TD G TIA + + + ++S
Sbjct: 1 MAKELAQTRDASQ---VFGVARIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESS 57
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A D +AK + G++++ VK+ G G +ALRAL G I I
Sbjct: 58 PYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTKTKTPGPGGQAALRALARSGLRIGRIE 117
Query: 112 DVTMIA 117
DVT I
Sbjct: 118 DVTPIP 123
>gi|322367327|gb|ADW95785.1| 40s ribosomal S14-like protein [Phragmatopoma lapidosa]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + +
Sbjct: 25 EIVFGTAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKADRDEASPYAAMLAAQDVAVR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 85 CKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 136
>gi|321474831|gb|EFX85795.1| hypothetical protein DAPPUDRAFT_230521 [Daphnia pulex]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G T+A + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGRETLARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 LLGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 136
>gi|149286948|gb|ABR23373.1| 40S ribosomal protein S14 [Ornithodoros parkeri]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNIV------------SGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + +E + +V G AH+ ++FN+T + +TD G TIA +
Sbjct: 1 MA--PRKGKQKEEQPVVALGPQALDGENVFGVAHIYASFNDTFVHVTDLSGRETIARVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + + SP+AA +A D + K + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDEASPYAAMLAAQDVAEKCKAVGITALHIKLRATGGTRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L I I DVT I
Sbjct: 119 LARSDMKIGRIEDVTPIP 136
>gi|221057033|ref|XP_002259654.1| 40S ribosomal subunit protein S14 [Plasmodium knowlesi strain H]
gi|193809726|emb|CAQ40428.1| 40S ribosomal subunit protein S14, putative [Plasmodium knowlesi
strain H]
Length = 151
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D + +
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAVR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S++ +K+ G G SALRAL G I I DVT I
Sbjct: 85 LKELGVSAIHIKLRASGGTKSKTPGPGAQSALRALARSGLKIGRIEDVTPIP 136
>gi|70909537|emb|CAJ17191.1| ribosomal protein S14e [Sphaerius sp. APV-2005]
Length = 152
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI+ + + + + SP+AA +A D + K +
Sbjct: 28 VFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 87
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 88 SLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 137
>gi|17554776|ref|NP_498572.1| Ribosomal Protein, Small subunit family member (rps-14)
[Caenorhabditis elegans]
gi|308502025|ref|XP_003113197.1| CRE-RPS-14 protein [Caenorhabditis remanei]
gi|1350935|sp|P48150|RS14_CAEEL RecName: Full=40S ribosomal protein S14
gi|458981|gb|AAC48301.1| Ribosomal protein, small subunit protein 14, confirmed by
transcript evidence [Caenorhabditis elegans]
gi|308265498|gb|EFP09451.1| CRE-RPS-14 protein [Caenorhabditis remanei]
Length = 152
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
++ G AH+ ++FN+T + ITD G TI + + + ++SP+AA +A D + +
Sbjct: 26 ELIFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 86 CKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIP 137
>gi|195618768|gb|ACG31214.1| 40S ribosomal protein S14 [Zea mays]
Length = 150
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + +R E + V G AH+ ++FN+T I ITD G T+ + +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHITDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SA RAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSAXRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 SGMKIGRIEDVTPVP 135
>gi|156554296|ref|XP_001602465.1| PREDICTED: similar to S14e ribosomal protein [Nasonia vitripennis]
gi|152940797|gb|ABS44863.1| putative ribosomal protein S14 [Oryza sativa Japonica Group]
Length = 151
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 1 MPKSPSRIRN-----------RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M +++ RE +N+ G AH+ ++FN+T + +TD G TIA +
Sbjct: 1 MAPKRGKVQKEEVQVSLGPQVREGENV-FGVAHIFASFNDTFVHVTDLSGRETIARVTGG 59
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + K ++ G+++L +K+ G G SALRAL
Sbjct: 60 MKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 101 RAIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 120 ARSNMKIGRIEDVTPIP 136
>gi|84489669|ref|YP_447901.1| 30S ribosomal protein S11P [Methanosphaera stadtmanae DSM 3091]
gi|121731098|sp|Q2NFZ5|RS11_METST RecName: Full=30S ribosomal protein S11P
gi|84372988|gb|ABC57258.1| 30S ribosomal protein S11P [Methanosphaera stadtmanae DSM 3091]
Length = 130
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AHV S+FNNT IT+TD G TI S V S +++SPFAA A + + +
Sbjct: 7 WGVAHVYSSFNNTIITVTDITGAETITQWSGGKVVRSDRQESSPFAAMEAANRVADDIKE 66
Query: 77 HGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G++ L +KV G G + +RAL G I I DVT I H+
Sbjct: 67 KGIAGLHIKVRASGGNGPRTPGPGAQATIRALARAGIKIGKIEDVTPIPHD 117
>gi|110816068|ref|YP_684400.1| ribosomal protein S11 [Oltmannsiellopsis viridis]
gi|86450279|gb|ABC96358.1| ribosomal protein S11 [Oltmannsiellopsis viridis]
Length = 194
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
H+ T NNT I +T+ G + S +G +G R+ + +A + + + A
Sbjct: 82 ADAVLHLKKTRNNTIIALTNKIGKVKSVLSAGCLGLTGPRRATVYAGERVCEQMAKLALK 141
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G + VK G G GR ++A+ G I+ I +V+ I HNGCR +K RR
Sbjct: 142 MGYKRVIVKTRGTGYGRSQCVKAIAKTGLKILLIEEVSSIPHNGCRAKKARR 193
>gi|100913266|gb|ABF69533.1| ribosomal protein S14 [Strongyloides ratti]
Length = 151
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T + +TD G T+ + + + ++SP+AA +A D S +
Sbjct: 25 EIVFGVAHIYASFNDTFVHVTDLSGKETVIKVTGGMKVKADRDESSPYAAMLAAQDVSER 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 85 CKMVGINALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|225440827|ref|XP_002282061.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 150
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKVREPKEENVTLGPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|70909535|emb|CAJ17190.1| ribosomal protein S14e [Curculio glandium]
Length = 151
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKGKVQKEEVQVSLGPQVREGEIVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA + D + K ++ G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLXAQDVAEKCKSLGITALHIKLRATGGXKTKTPGXGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSNMKIGRIEDVTPIP 136
>gi|160331197|ref|XP_001712306.1| rps14 [Hemiselmis andersenii]
gi|159765753|gb|ABW97981.1| rps14 [Hemiselmis andersenii]
Length = 140
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ G H+ ++FN+T I +TD G T+ + + + ++SP+AA VA + +
Sbjct: 14 ELKFGIVHIFASFNDTFIHVTDLSGSETLIRRTGGMEVKADRDESSPYAAMVAAQKVAER 73
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SA+R+L G I I DVT I
Sbjct: 74 CKEIGINALHIKLRATGGNRSRTPGPGAQSAIRSLARSGIKIGRIEDVTPIP 125
>gi|195048159|ref|XP_001992480.1| GH24178 [Drosophila grimshawi]
gi|195131551|ref|XP_002010214.1| GI15807 [Drosophila mojavensis]
gi|195394059|ref|XP_002055663.1| GJ18661 [Drosophila virilis]
gi|193893321|gb|EDV92187.1| GH24178 [Drosophila grimshawi]
gi|193908664|gb|EDW07531.1| GI15807 [Drosophila mojavensis]
gi|194150173|gb|EDW65864.1| GJ18661 [Drosophila virilis]
Length = 151
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGENVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAERCKVLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|115446513|ref|NP_001047036.1| Os02g0534800 [Oryza sativa Japonica Group]
gi|115458298|ref|NP_001052749.1| Os04g0413600 [Oryza sativa Japonica Group]
gi|38346327|emb|CAE02065.2| OJ000126_13.9 [Oryza sativa Japonica Group]
gi|50251870|dbj|BAD27798.1| 40S ribosomal protein S14 [Oryza sativa Japonica Group]
gi|50253050|dbj|BAD29299.1| 40S ribosomal protein S14 [Oryza sativa Japonica Group]
gi|113536567|dbj|BAF08950.1| Os02g0534800 [Oryza sativa Japonica Group]
gi|113564320|dbj|BAF14663.1| Os04g0413600 [Oryza sativa Japonica Group]
gi|116309395|emb|CAH66472.1| OSIGBa0137L20.1 [Oryza sativa Indica Group]
gi|116310350|emb|CAH67364.1| OSIGBa0134P10.10 [Oryza sativa Indica Group]
gi|125548222|gb|EAY94044.1| hypothetical protein OsI_15822 [Oryza sativa Indica Group]
gi|215715325|dbj|BAG95076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768130|dbj|BAH00359.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190909|gb|EEC73336.1| hypothetical protein OsI_07537 [Oryza sativa Indica Group]
gi|222622994|gb|EEE57126.1| hypothetical protein OsJ_07016 [Oryza sativa Japonica Group]
Length = 151
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 27 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVP 136
>gi|115350031|ref|YP_764430.1| ribosomal protein S11 [Stigeoclonium helveticum]
gi|122165118|sp|Q06SD6|RR11_STIHE RecName: Full=30S ribosomal protein S11, chloroplastic
gi|98990245|gb|ABF60212.1| ribosomal protein S11 [Stigeoclonium helveticum]
Length = 130
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K + + RK I G ++ +T NNT +TIT+ G+ + WSS G RK +
Sbjct: 1 MSKQIRKNVKKPRKKIYRGVVYIQTTQNNTIVTITNIKGDAVCWSSAGSCDLKGRRKATA 60
Query: 61 FAAQVATDDCSAKA-QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AA++A + + KA + + +V ++G GA RD+A+ + G + + + + + HN
Sbjct: 61 YAAKLAAANAAKKARREFVLKEAKVLITGPGAARDTAIHEIHKAGIKLTILREKSGVPHN 120
Query: 120 GCRPRKRRRI 129
GCRP KRRR+
Sbjct: 121 GCRPPKRRRV 130
>gi|290462035|gb|ADD24065.1| 40S ribosomal protein S14 [Lepeophtheirus salmonis]
Length = 152
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G T+ + + + + SP+AA +A D + K +
Sbjct: 28 VFGVAHIFASFNDTFVHVTDLCGRETLCRVTGGMKVKADRDEASPYAAMLAAQDVAEKIK 87
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 88 TLGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMRIGRIEDVTPIP 137
>gi|121543799|gb|ABM55564.1| putative ribosomal protein S14 [Maconellicoccus hirsutus]
Length = 151
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCR 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 AVGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMHIGRIEDVTPIP 136
>gi|225718212|gb|ACO14952.1| 40S ribosomal protein S14 [Caligus clemensi]
Length = 152
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 1 MPKSPSRIRNRERKNI-------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSS 46
M P + + + + + V G AH+ +++N+T + +TD G T+ +
Sbjct: 1 MA--PRKGKKEKTEEVQVQLGPQVREGQDVFGVAHIFASYNDTFVHVTDLCGRETLCRVT 58
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALR 98
+ + + SP+AA +A D + K + G+++L +K+ G G SALR
Sbjct: 59 GGMKVKADRDEASPYAAMLAAQDVAEKIKTLGITALHIKLRATGGNRTKTPGPGAQSALR 118
Query: 99 ALRAIGFTIVSICDVTMIA 117
AL G I I DVT I
Sbjct: 119 ALARSGMKIGRIEDVTPIP 137
>gi|110671466|gb|ABG81984.1| putative ribosomal protein S14e [Diaphorina citri]
Length = 151
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL I I DVT I
Sbjct: 87 TLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIP 136
>gi|62083507|gb|AAX62478.1| ribosomal protein S14 [Lysiphlebus testaceipes]
Length = 151
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + K +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLTGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL I I DVT I
Sbjct: 87 SLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMKIGRIEDVTPIP 136
>gi|315427189|dbj|BAJ48803.1| small subunit ribosomal protein S11 [Candidatus Caldiarchaeum
subterraneum]
gi|315428156|dbj|BAJ49741.1| small subunit ribosomal protein S11 [Candidatus Caldiarchaeum
subterraneum]
Length = 147
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M ++ G H+ S++NN + +TD G TIA +S + +G + +
Sbjct: 7 MSAEQQSAEQTPQQKQKWGVVHIYSSYNNIIVHLTDLTGAETIARASGGMFVDAGRLEPT 66
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSIC 111
P+A A A+ G++++ + V G +A+R + G I I
Sbjct: 67 PYAGMRAASFVMEAAKAAGITAVHILVRAPGGVKSRTPGPATQAAIRTIARSGLMIGRIE 126
Query: 112 DVTMIAHN 119
DVT I H+
Sbjct: 127 DVTPIPHD 134
>gi|164659099|ref|XP_001730674.1| hypothetical protein MGL_2128 [Malassezia globosa CBS 7966]
gi|159104571|gb|EDP43460.1| hypothetical protein MGL_2128 [Malassezia globosa CBS 7966]
Length = 255
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ +R ++I R HV ++ NNT +T+T P G +A S GF ++++ A
Sbjct: 98 QPSTRTWQAVDRSIPH-RMHVKASRNNTIVTLTMPTGEPLATESGGTAGFRKAQRSGYEA 156
Query: 63 AQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRALRAI-----GFTIVSICDV 113
A + H + +EV +G G GR++ RAL+A I ++ D
Sbjct: 157 GYRAAVRIFHQIVAHKSQWDIRHIEVLWNGFGQGREAVFRALQASEGEPVRHLIKAMTDK 216
Query: 114 TMIAHNGCRPRKRR 127
T I G RP+KRR
Sbjct: 217 TPIKIGGVRPKKRR 230
>gi|131773|sp|P19951|RS142_MAIZE RecName: Full=40S ribosomal protein S14; AltName: Full=Clone MCH2
Length = 150
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 26 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 85
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 86 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVP 135
>gi|312151038|gb|ADQ32031.1| similar to ribosomal protein S14 [synthetic construct]
Length = 170
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRA 99
+ + ++SP+AA + T D + + + G+ +L +++ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMIA 117
L G I I DVT I
Sbjct: 119 LACSGMKIGRIEDVTPIP 136
>gi|323445949|gb|EGB02316.1| 40S ribosomal protein S14 [Aureococcus anophagefferens]
Length = 148
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 1 MPKSPSRIR-------NRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
M K I+ V AH+ ++FN+T + +TD G T+ + +
Sbjct: 1 MSKKTEEIKEVTTLGPKVAEGEQVFAVAHIFASFNDTFVHVTDLSGRETLVRVTGGMKVK 60
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIG 104
+ + SP+AA +A D + + + G++++ +K+ G G SALRAL G
Sbjct: 61 ADRDEASPYAAMLAAQDVAERCKELGVTAIHIKIRATGGNKTKTPGPGAQSALRALARAG 120
Query: 105 FTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 MKIGRIEDVTPIP 133
>gi|302768759|ref|XP_002967799.1| hypothetical protein SELMODRAFT_8068 [Selaginella moellendorffii]
gi|302821915|ref|XP_002992618.1| hypothetical protein SELMODRAFT_8065 [Selaginella moellendorffii]
gi|300139582|gb|EFJ06320.1| hypothetical protein SELMODRAFT_8065 [Selaginella moellendorffii]
gi|300164537|gb|EFJ31146.1| hypothetical protein SELMODRAFT_8068 [Selaginella moellendorffii]
Length = 116
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+G AH T N +TITD GN A +S + GF GS ++S FAA + + A
Sbjct: 3 TGIAHSRFTHGNVFVTITDFEGNARAQASAGMCGFKGSHRDSKFAANAVAEQAARGAAQL 62
Query: 78 GMSSLEVKVS-GLGAG-RDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
GM ++EV++ G G G R LR + G T++ I DVT I NGCRP K+RR+
Sbjct: 63 GMKAVEVRLKGGFGVGKRKYLLRGFKQGGLTVLKIRDVTAIPFNGCRPPKKRRV 116
>gi|219362517|ref|NP_001136755.1| hypothetical protein LOC100216896 [Zea mays]
gi|194696926|gb|ACF82547.1| unknown [Zea mays]
Length = 151
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 27 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVP 136
>gi|301091063|ref|XP_002895724.1| 40S ribosomal protein S14 [Phytophthora infestans T30-4]
gi|262097042|gb|EEY55094.1| 40S ribosomal protein S14 [Phytophthora infestans T30-4]
Length = 150
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K P+ E + V G AH+ ++FN+T + +TD G TI + +
Sbjct: 1 MSKKPATKEVEEVVRVGPSLKEGEQVFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ + SP+AA +A D +AK + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDEASPYAAMLAAQDVAAKCKEVGVTALHIKIRATGGNRTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 NGLKIGRIEDVTPIP 135
>gi|253795634|ref|YP_003038730.1| putative 30S ribosomal subunit protein S11 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253739942|gb|ACT34277.1| putative 30S ribosomal subunit protein S11 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 131
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
V NN D GN +AW+S GF G++K SPFA QVA + KA G+
Sbjct: 22 VVRVNVGSNNVVACCADCAGNVLAWASAGERGFKGAQKASPFATQVAVEAILRKAGARGV 81
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++L+V+VSG GA RD L+AL+A G TI + DVT +AHNGCRP K RR+
Sbjct: 82 TALDVEVSGGGANRDVVLKALQASGLTISVVRDVTPVAHNGCRPPKTRRV 131
>gi|50291641|ref|XP_448253.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527565|emb|CAG61214.1| unnamed protein product [Candida glabrata]
Length = 138
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M K + R+ + V G A + ++FN+T + +TD G TI+ + + + ++S
Sbjct: 1 MAKDLVQSRDASQ---VFGVARIYASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESS 57
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A D +AK G++++ VK+ G G +ALRAL G I I
Sbjct: 58 PYAAMLAAQDVAAKCLEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIE 117
Query: 112 DVTMIA 117
DVT +
Sbjct: 118 DVTPVP 123
>gi|126460418|ref|YP_001056696.1| 30S ribosomal protein S11P [Pyrobaculum calidifontis JCM 11548]
gi|152060813|sp|A3MX63|RS11_PYRCJ RecName: Full=30S ribosomal protein S11P
gi|126250139|gb|ABO09230.1| SSU ribosomal protein S11P [Pyrobaculum calidifontis JCM 11548]
Length = 141
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + + + ++++ + G A + S+ NNT ITITD G T+A S +V + K S
Sbjct: 1 MSTAETPQQPQQQQKLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPS 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSIC 111
P+AA A + A G++++ +KV G G G +A+RAL G I I
Sbjct: 61 PWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIE 120
Query: 112 DVTMIAHNGCRPR---KRRRI 129
DVT I H+ RP K RR+
Sbjct: 121 DVTPIPHDTIRPPSGRKGRRV 141
>gi|168056207|ref|XP_001780113.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668516|gb|EDQ55122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 151
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 5 PSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
++R + +N+ V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 4 KKKVRAEKEENVTLGPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVK 63
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIG 104
+ + SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 64 ADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSN 123
Query: 105 FTIVSICDVTMIA 117
I I DVT I
Sbjct: 124 MRIGRIEDVTPIP 136
>gi|15213816|gb|AAK92183.1|AF400211_1 ribosomal protein S14 [Spodoptera frugiperda]
Length = 151
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKNKVQKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT +
Sbjct: 121 RSSMKIGRIEDVTPVP 136
>gi|225464906|ref|XP_002274381.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|147843327|emb|CAN80530.1| hypothetical protein VITISV_018475 [Vitis vinifera]
Length = 150
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|268557568|ref|XP_002636774.1| Hypothetical protein CBG23508 [Caenorhabditis briggsae]
gi|187020953|emb|CAP39534.1| hypothetical protein CBG_23508 [Caenorhabditis briggsae AF16]
Length = 208
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ++ NNT +T+TD I +S ++ GF +RK + A Q + G+
Sbjct: 99 VVYIRASKNNTLVTVTDTKHEVITSTSCRLEGFKNARKKTTIAGQTTGVAAGQRLVRRGI 158
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V+V G+G GR + ++ L G +VSI D T + G RPRK RRI
Sbjct: 159 RTVRVQVKGIGPGRMTCVKGLTVAGVRVVSITDHTPLCELGPRPRKIRRI 208
>gi|170593697|ref|XP_001901600.1| ribosomal protein S11 containing protein [Brugia malayi]
gi|158590544|gb|EDP29159.1| ribosomal protein S11 containing protein [Brugia malayi]
Length = 208
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 59/110 (53%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV ++ NNT +T+TD N I ++S ++ GF +RK + A Q + G+
Sbjct: 99 IVHVKASRNNTLVTVTDHKYNIITYTSCRLEGFKNARKKTNIAGQTTGVAAGQRLIRRGI 158
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V V GLG GR ++++ + G IVSI + + + G RPRK RI
Sbjct: 159 RTVRVLVRGLGPGRMTSIQGMATAGVKIVSITEQSALPELGPRPRKIPRI 208
>gi|222628837|gb|EEE60969.1| hypothetical protein OsJ_14740 [Oryza sativa Japonica Group]
Length = 188
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 64 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 123
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 124 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVP 173
>gi|10580673|gb|AAG19519.1| 30S ribosomal protein S11P [Halobacterium sp. NRC-1]
Length = 107
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 32 ITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
+T+TD G T+A SS V + SP+AA + + + + G+ + V+V G G
Sbjct: 1 MTVTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVLDQGIEKVHVRVRGPG 60
Query: 91 --------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
G +A+RAL G I I DVT I H+G RP K
Sbjct: 61 GNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGTRPPK 103
>gi|239811628|gb|ACS27115.1| ribosomal protein S11 [Heterosigma akashiwo]
Length = 135
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ ++ K G + + NT T+T G S +VG+ S+ + FA
Sbjct: 9 SKIQKLPSKPSKIQQEGIIYGQFSKQNTIFTLTTLTGQVKTSVSNGMVGYKNSKSKTQFA 68
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
Q A + KA+ S+ + G GR ++ + G I I D T I HNGCR
Sbjct: 69 TQAAAERLGQKAKALNFGSITFVIKGKNKGRKKCVKTFQKAGLKINMIYDQTPITHNGCR 128
Query: 123 PRKRRR 128
P K R
Sbjct: 129 PPKEPR 134
>gi|14324778|dbj|BAB59705.1| ribosomal protein small subunit S14 [Thermoplasma volcanium GSS1]
Length = 127
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G AH+ ++ NNT I +TDP G TIA S +V + + SP+AA A D S +
Sbjct: 4 TGIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSETLKE 63
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
H ++ L +KV G G +A+RAL G IV I +VT I H+G
Sbjct: 64 HEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 116
>gi|329766485|ref|ZP_08258029.1| ribosomal protein S11 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137084|gb|EGG41376.1| ribosomal protein S11 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 161
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPF 61
++ SR + G AH+ S++NNT I +TD G T++ SS V + ++SPF
Sbjct: 23 QTKSRPETKTEGPEKWGIAHIYSSYNNTIIHMTDLTGGETVSISSGGVHVNADRYESSPF 82
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDV 113
AA A + A G + ++V G G +A+RAL GF I I DV
Sbjct: 83 AAMKAANAVVEVAHTKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFKIGRIDDV 142
Query: 114 TMIAHN 119
T I H+
Sbjct: 143 TPIPHD 148
>gi|224080033|ref|XP_002305998.1| predicted protein [Populus trichocarpa]
gi|118485417|gb|ABK94565.1| unknown [Populus trichocarpa]
gi|222848962|gb|EEE86509.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D S + +
Sbjct: 27 AFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQSALRALSRSGMRIGRIEDVTPIP 136
>gi|167044282|gb|ABZ08961.1| putative ribosomal protein S11 [uncultured marine crenarchaeote
HF4000_APKG6B14]
Length = 167
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPF 61
K+ + + ++ G AH+ S++NNT I ITD G T+A SS + ++SPF
Sbjct: 31 KAATVTKKETKEK--WGIAHIFSSYNNTIIHITDLTGAETVAISSGGQHVTADRYESSPF 88
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDV 113
AA A++ + AQ+ G ++L +KV G G SA+RAL GF I I D
Sbjct: 89 AAMKASNAVVSAAQSKGFTALHIKVRAVGGTKGRVPGPGAQSAIRALARGGFKIGRIDDC 148
Query: 114 TMIAHN 119
T I H+
Sbjct: 149 TPIPHD 154
>gi|170579365|ref|XP_001894800.1| 40S ribosomal protein S14 [Brugia malayi]
gi|100913234|gb|ABF69510.1| ribosomal protein S14 [Brugia malayi]
gi|158598482|gb|EDP36362.1| 40S ribosomal protein S14, putative [Brugia malayi]
Length = 151
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +NI G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 22 KEGENI-FGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 80
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + +++L +K+ G G SALRAL G I I DVT I
Sbjct: 81 VAERCKALSINALHIKLRATGGTKTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 136
>gi|324538632|gb|ADY49545.1| 40S ribosomal protein S14 [Ascaris suum]
Length = 151
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D + +
Sbjct: 25 ELVFGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAER 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G SALRAL G I I DVT I
Sbjct: 85 CKALSINALHIKLRATGGTKTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 136
>gi|124027414|ref|YP_001012734.1| 30S ribosomal protein S11P [Hyperthermus butylicus DSM 5456]
gi|152060594|sp|A2BK78|RS11_HYPBU RecName: Full=30S ribosomal protein S11P
gi|123978108|gb|ABM80389.1| 30S ribosomal protein S11 [Hyperthermus butylicus DSM 5456]
Length = 133
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ I G AH+ S++NNT I ITD G T+A +S +V + K SP+AA +A +
Sbjct: 6 REIKWGVAHIYSSYNNTIIHITDLTGAETVARTSGGMVVKADREKPSPYAAMLAASRAAQ 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G+ +L +KV G G +A+RAL GF I I DVT + H+
Sbjct: 66 QAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHD 120
>gi|327311736|ref|YP_004338633.1| 30S ribosomal protein S11 [Thermoproteus uzoniensis 768-20]
gi|326948215|gb|AEA13321.1| ribosomal protein S11 [Thermoproteus uzoniensis 768-20]
Length = 141
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M + + + G A + S+ NNT ITITD G T+A S V + K S
Sbjct: 1 MSAGEQPTTEAKPQKLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVKADKDKPS 60
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSIC 111
P+AA A + A G++++ +KV G G G +A+RAL G I I
Sbjct: 61 PWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARAGLVIGRIE 120
Query: 112 DVTMIAHNGCRPR---KRRRI 129
DVT I H+ RP K RR+
Sbjct: 121 DVTPIPHDTIRPPHGRKGRRV 141
>gi|198462293|ref|XP_002132196.1| GA22514 [Drosophila pseudoobscura pseudoobscura]
gi|198140046|gb|EDY70906.1| GA22514 [Drosophila pseudoobscura pseudoobscura]
Length = 151
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGEIVFGVAHIYASFNDTFVYVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVK--------VSGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K G G ALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKLLGITALNIKRRATGGNKTKTPGPGAQPALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|315115391|gb|ADT80668.1| ribosomal protein S14 [Euphydryas aurinia]
Length = 151
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT +
Sbjct: 121 RSNMKIGRIEDVTPVP 136
>gi|330039032|ref|XP_003239768.1| 40S ribosomal protein S14 [Cryptomonas paramecium]
gi|327206693|gb|AEA38870.1| 40S ribosomal protein S14 [Cryptomonas paramecium]
Length = 139
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++FN+T I ITD G T+ + + S ++SP+AA +A S K +
Sbjct: 17 GIAHIFASFNDTFIHITDLSGSETLIRRTGGMEVKSDRDESSPYAAMIAAQKASEKCKEL 76
Query: 78 GMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +++ G G SA+RAL G I I DVT +
Sbjct: 77 GINALHIRLRATGGNRTRTLGPGAQSAIRALARSGIKIGRIEDVTPVP 124
>gi|66802868|ref|XP_635277.1| 40S ribosomal protein S14 [Dictyostelium discoideum AX4]
gi|74896814|sp|Q54EG3|RS14_DICDI RecName: Full=40S ribosomal protein S14
gi|60463562|gb|EAL61747.1| 40S ribosomal protein S14 [Dictyostelium discoideum AX4]
Length = 152
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD TI + + + ++SP+AA +A D + +
Sbjct: 26 ELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKVKTDRDESSPYAATMAAQDVALR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
+ G+++L +K+ G G SALRAL G I I DVT I + R +
Sbjct: 86 CKELGVTALHIKLRATGGNGSKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKS 145
Query: 125 --KRRRI 129
+ RR+
Sbjct: 146 GHRGRRL 152
>gi|13541395|ref|NP_111083.1| 30S ribosomal protein S11P [Thermoplasma volcanium GSS1]
gi|48474934|sp|Q97B94|RS11_THEVO RecName: Full=30S ribosomal protein S11P
Length = 132
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G AH+ ++ NNT I +TDP G TIA S +V + + SP+AA A D S +
Sbjct: 9 TGIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSETLKE 68
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
H ++ L +KV G G +A+RAL G IV I +VT I H+G
Sbjct: 69 HEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 121
>gi|325184044|emb|CCA18503.1| 40S ribosomal protein S14 putative [Albugo laibachii Nc14]
Length = 150
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 5 PSRIRNRERKNIVS------------GRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVG 51
R + +E + + G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 2 SKRGQKKEVEEVTRVGPTLKEGEEVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKV 61
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAI 103
+ + SP+AA +A D +AK + G+++L K+ G G SALRAL
Sbjct: 62 KADRDEASPYAAMLAAQDVAAKCKEVGITALHTKIRATGGNRTKTPGPGAQSALRALARN 121
Query: 104 GFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 122 GMKIGRIEDVTPIP 135
>gi|239811668|gb|ACS27154.1| ribosomal protein S11 [Heterosigma akashiwo]
Length = 135
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ ++ K G + + NT T+T G S +VG+ S+ + FA
Sbjct: 9 SKIQKLPSKPSKIQQEGIIYGQFSKQNTIFTLTTLTGQVKTSVSNGMVGYKNSKSKTQFA 68
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
Q A + KA+ S+ + G GR ++ + G I I D T I HNGCR
Sbjct: 69 TQAAAERLGQKAKALNFGSITFVIKGKNKGRKKCVKTFQKAGLKINMIYDQTPIIHNGCR 128
Query: 123 PRKRRR 128
P K R
Sbjct: 129 PPKEPR 134
>gi|320582350|gb|EFW96567.1| Ribosomal protein 59 of small subunit [Pichia angusta DL-1]
Length = 142
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++ N+T + +TD G TIA ++ + + ++SP+AA +A D + K +
Sbjct: 18 VFGVAHIYASTNDTFVHVTDLSGRETIARATGGMKVKADRDESSPYAAMLAAQDVAVKCR 77
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G SALRAL G I I DVT I
Sbjct: 78 EVGITAVHVKMRATGGTRSKTPGPGGQSALRALARSGLKIGRIEDVTPIP 127
>gi|112982701|ref|NP_001037114.1| 40S ribosomal protein S14 [Bombyx mori]
gi|51863346|gb|AAU11819.1| ribosomal protein S14 [Bombyx mori]
Length = 151
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+G + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKAGRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT +
Sbjct: 121 RSSMKIGRIEDVTPVP 136
>gi|74904844|sp|Q5UAM9|RS14_BOMMO RecName: Full=40S ribosomal protein S14
gi|49532930|dbj|BAD26700.1| ribosomal protein S14 [Plutella xylostella]
gi|54609311|gb|AAV34871.1| ribosomal protein S14 [Bombyx mori]
gi|268306362|gb|ACY95302.1| ribosomal protein S14 [Manduca sexta]
Length = 151
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT +
Sbjct: 121 RSSMKIGRIEDVTPVP 136
>gi|302348807|ref|YP_003816445.1| 30S ribosomal protein S11P [Acidilobus saccharovorans 345-15]
gi|302329219|gb|ADL19414.1| 30S ribosomal protein S11P [Acidilobus saccharovorans 345-15]
Length = 131
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+FNNT I ITD G T A S +V + K SP+AA + +
Sbjct: 4 RELKWGVAHIYSSFNNTIIHITDMSGAETAARISGGMVVKADREKPSPYAAMLGAARAAQ 63
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
A + G++++ +KV G G +A+RAL GF + I DVT I H+
Sbjct: 64 TAMDRGITAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFVVGRIEDVTPIPHD 118
>gi|312092638|ref|XP_003147407.1| ribosomal protein S14 [Loa loa]
gi|307757428|gb|EFO16662.1| ribosomal protein S14 [Loa loa]
Length = 151
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +NI G AH+ ++FN+T + +TD G TI + + + + SP+AA +A D
Sbjct: 22 KEGENI-FGVAHIFASFNDTFVHVTDISGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 80
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + +++L +K+ G G SALRAL G I I DVT I
Sbjct: 81 VAERCKALSINALHIKLRATGGTKTKTPGPGAQSALRALARSGIKIGRIEDVTPIP 136
>gi|308512795|gb|ADO33051.1| ribosomal protein S14 [Biston betularia]
Length = 151
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLAGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ + SP+AA +A D + K + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT +
Sbjct: 121 RSAMKIGRIEDVTPVP 136
>gi|171186073|ref|YP_001794992.1| 30S ribosomal protein S11P [Thermoproteus neutrophilus V24Sta]
gi|170935285|gb|ACB40546.1| ribosomal protein S11 [Thermoproteus neutrophilus V24Sta]
Length = 135
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ G A + S+ NNT ITITD G T+A S +V + K SP+AA A +
Sbjct: 9 KLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPSPWAAMQAAYKAAQL 68
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
A G++++ +KV G G G +A+RAL G I I DVT I H+ RP
Sbjct: 69 ALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDIIRPPS 128
Query: 125 --KRRRI 129
K RR+
Sbjct: 129 GRKGRRV 135
>gi|308504651|ref|XP_003114509.1| hypothetical protein CRE_27425 [Caenorhabditis remanei]
gi|308261894|gb|EFP05847.1| hypothetical protein CRE_27425 [Caenorhabditis remanei]
Length = 208
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ++ NNT +T+ D I +S ++ GF +RK + A Q + G+
Sbjct: 99 LVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTTIAGQTTGVAAGQRLVRRGI 158
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V+V GLG GR + ++ L G +VSI D T + G RPRK RRI
Sbjct: 159 RTVRVQVKGLGPGRMTCVKGLTVAGVRVVSITDHTPLCELGPRPRKIRRI 208
>gi|288871925|dbj|BAI70611.1| ribosomal protein S11 [Heterosigma akashiwo]
Length = 135
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ ++ K G + + NT T+T G S +VG+ S+ + FA
Sbjct: 9 SKIQKLPSKPSKIQQEGIIYGQFSKQNTIFTLTTLTGQVKTSVSNGMVGYKNSKSKTQFA 68
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
Q A + KA+ S+ + G GR ++ + G I I D T I HNGCR
Sbjct: 69 TQAAAERLGQKAKALNFGSITFVIKGKNKGRKKCVKTFQKAGLKINMIFDQTPIIHNGCR 128
Query: 123 PRKRRR 128
P K R
Sbjct: 129 PPKEPR 134
>gi|320101539|ref|YP_004177131.1| 30S ribosomal protein S11P [Desulfurococcus mucosus DSM 2162]
gi|319753891|gb|ADV65649.1| SSU ribosomal protein S11P [Desulfurococcus mucosus DSM 2162]
Length = 133
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+ NNT I ITD G T++ S +V + K SP+AA +A +
Sbjct: 6 RELKWGIAHIYSSPNNTIIHITDVTGAETVSRWSGGMVVKADREKPSPYAAMMAASRAAN 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G+++L +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 EAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARSGFIIGRIEDVTPIPHD 120
>gi|119872054|ref|YP_930061.1| 30S ribosomal protein S11P [Pyrobaculum islandicum DSM 4184]
gi|152060814|sp|A1RRY6|RS11_PYRIL RecName: Full=30S ribosomal protein S11P
gi|119673462|gb|ABL87718.1| SSU ribosomal protein S11P [Pyrobaculum islandicum DSM 4184]
Length = 139
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ G A + S+ NNT ITITD G T+A S +V + K SP+AA A +
Sbjct: 13 KLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPSPWAAMQAAYKAAQL 72
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
A G++++ +KV G G G +A+RAL G I I DVT I H+ RP
Sbjct: 73 ALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLIIGRIEDVTPIPHDTIRPPS 132
Query: 125 --KRRRI 129
K RR+
Sbjct: 133 GRKGRRV 139
>gi|328766765|gb|EGF76818.1| hypothetical protein BATDEDRAFT_6087 [Batrachochytrium
dendrobatidis JAM81]
Length = 113
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ + NNT T+TD G T+ W+S G + + + A A + K ++ +
Sbjct: 1 ILHISANKNNTICTLTDSTGATLCWTSAGTCGLKKAARGTSDAGHQAVLALTEKVESKNI 60
Query: 80 SS---LEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + ++++G G GR+ A RA+RA G++IV I D T H GCRPRK+RR+
Sbjct: 61 TMSNGIHLRIAGFGPGREQAFRAVRAAGWSIVRISDYTSYRHAGCRPRKKRRL 113
>gi|119909180|ref|XP_584177.3| PREDICTED: ribosomal protein S14-like, partial [Bos taurus]
Length = 191
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 1 MPKSPSRIRNRER-----------KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M + + ER +N+ G H+ + FN+T + +TD G TI +
Sbjct: 41 MAPRKGKEKKEERVISLGPQVAEGENV-FGVCHIFAAFNDTFVHVTDLSGKETICRVTGG 99
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + + GM++L +K+ G G SALRAL
Sbjct: 100 MKVKADRDESSPYAAVLAAQDVDQRGKELGMTALHIKLQARGGNRTKTPGPGAQSALRAL 159
Query: 101 RAIGFTIVSICDVTMI 116
G I I DVT I
Sbjct: 160 DCSGMKIGRIEDVTPI 175
>gi|108773409|ref|YP_635928.1| ribosomal protein S11 [Helicosporidium sp. ex Simulium jonesii]
gi|122244868|sp|Q2EEW6|RR11_HELSJ RecName: Full=Plastid 30S ribosomal protein S11
gi|87242984|gb|ABD33976.1| ribosomal protein S11 [Helicosporidium sp. ex Simulium jonesi]
Length = 154
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
+ +++ ++ +++S++NNT I++TD GN + S + G K A++ A
Sbjct: 33 TKFKQKYSLDVAYVYIISSYNNTLISLTDFLGNVLKNESCGSCNYKGRFKRKFIASKQAA 92
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
++ + + + L + + G G G + +R +R I+ I +NGCR +K+R
Sbjct: 93 ENIVSFCKFQRIKRLVIILHGYGKGSEMVIRTIREKELKILDIKIKDKKPYNGCRQKKKR 152
Query: 128 RI 129
RI
Sbjct: 153 RI 154
>gi|18313881|ref|NP_560548.1| 30S ribosomal protein S11P [Pyrobaculum aerophilum str. IM2]
gi|48474578|sp|Q8ZTM9|RS11_PYRAE RecName: Full=30S ribosomal protein S11P
gi|18161447|gb|AAL64730.1| ribosomal protein S11 [Pyrobaculum aerophilum str. IM2]
Length = 133
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E++ + G A + S+ NNT ITITD G T+A S V + K SP+AA A
Sbjct: 4 EQQKLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKA 63
Query: 71 SAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ A G++++ +KV G G G +A+RAL G I I DVT I H+ R
Sbjct: 64 AQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDIIR 123
Query: 123 PR---KRRRI 129
P K RR+
Sbjct: 124 PPSGRKGRRV 133
>gi|260784177|ref|XP_002587145.1| hypothetical protein BRAFLDRAFT_241911 [Branchiostoma floridae]
gi|229272283|gb|EEN43156.1| hypothetical protein BRAFLDRAFT_241911 [Branchiostoma floridae]
Length = 132
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV + +NNT T TD G +A ++ GF ++K + AA+V + KA + G+
Sbjct: 23 VIHVFANWNNTHATCTDSTGKILAQTTCGKEGFKNAKKATSVAAEVTGQSIATKALDLGI 82
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+++ + + G+G GR ++ ++ G IVSI D T + G RPRK RRI
Sbjct: 83 TNVRLVLRGIGPGRQPIVKGVQMGGVNIVSITDGTRFSATGPRPRKARRI 132
>gi|296243120|ref|YP_003650607.1| 30S ribosomal protein S11P [Thermosphaera aggregans DSM 11486]
gi|296095704|gb|ADG91655.1| SSU ribosomal protein S11P [Thermosphaera aggregans DSM 11486]
Length = 133
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+ NNT I ITD G T++ S +V + K SP+AA +A +
Sbjct: 6 RELKWGVAHIYSSLNNTIIHITDLSGAETVSRFSGGMVVKADREKPSPYAAMIAASKAAY 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G++++ +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 EAMDKGVTAIHIKVRAPGGHGSKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 120
>gi|288931229|ref|YP_003435289.1| ribosomal protein S11P [Ferroglobus placidus DSM 10642]
gi|288893477|gb|ADC65014.1| ribosomal protein S11P [Ferroglobus placidus DSM 10642]
Length = 133
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++K + G AH+ S++NNT ITITD G TIA S ++ + + +P+ A A
Sbjct: 4 KKKKEIWGIAHIFSSYNNTIITITDITGSETIARVSGGMIVKADRDEGNPYTAMQAALRA 63
Query: 71 SAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+ A+ G+ + +KV G G +A+RAL G I I DVT I H+G R
Sbjct: 64 AEMAKEKGIVGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTR 123
Query: 123 PRKRRR 128
P +R
Sbjct: 124 PPGGKR 129
>gi|547604|emb|CAA54769.1| ribosomal protein rp59 [Saccharomyces cerevisiae]
Length = 138
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M K + R+ + V G A + ++FN+T + +TD G TIA + + + ++S
Sbjct: 1 MAKDLVQARDNSQ---VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESS 57
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A D +AK + G++++ VK+ G G +ALRAL G I I
Sbjct: 58 PYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIE 117
Query: 112 DVTMIA 117
DVT +
Sbjct: 118 DVTPVP 123
>gi|281500816|pdb|3JYV|K Chain K, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 125
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 5 VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 64
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
G++++ VK+ G G +ALRAL G I I DVT + + R + R
Sbjct: 65 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGR 124
Query: 128 R 128
R
Sbjct: 125 R 125
>gi|255950396|ref|XP_002565965.1| Pc22g20650 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592982|emb|CAP99353.1| Pc22g20650 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D + +
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAVR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|242787237|ref|XP_002480964.1| 40S ribosomal protein S11 [Talaromyces stipitatus ATCC 10500]
gi|218721111|gb|EED20530.1| 40S ribosomal protein S11 [Talaromyces stipitatus ATCC 10500]
Length = 151
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 136
>gi|320587379|gb|EFW99859.1| 40S ribosomal protein s14 [Grosmannia clavigera kw1407]
Length = 150
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
MP P + + ++NI V G A + ++FN+T + +TD G TI +
Sbjct: 1 MP--PKKTQKPAQENISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETICRVTGG 58
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 59 MKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTKTPGPGAQSALRAL 118
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 119 ARSGMKIGRIEDVTPTP 135
>gi|289597071|ref|YP_003483767.1| ribosomal protein S11P [Aciduliprofundum boonei T469]
gi|289534858|gb|ADD09205.1| ribosomal protein S11P [Aciduliprofundum boonei T469]
Length = 128
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 20 RAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ S+ N+T IT TD G T A +S +V + + SP+AA A + + + +
Sbjct: 7 VVHIFSSHNDTIITATDITGAETFAKASGGMVVKADREEASPYAAMKAAEMVAEQLKEKE 66
Query: 79 MSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + VKV G G +A+RAL G I+ I DVT I H+ R +R
Sbjct: 67 IEEIIVKVRAPGGNRSMSPGPGAQAAIRALARAGMKILRIEDVTPIPHDSTRKPGGKR 124
>gi|326534008|dbj|BAJ93777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 3 KSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
S + R + +N+ V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 2 SSKRKTREPKEENVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 61
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A+ D + + + G+++L +K+ G G SALRAL
Sbjct: 62 VKADRDESSPYAAMLASKDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 121
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 122 SGMKIGRIEDVTPVP 136
>gi|313232792|emb|CBY19463.1| unnamed protein product [Oikopleura dioica]
Length = 151
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I ITD G T+ + + + ++SP+AA +A+ D + +A+
Sbjct: 27 VFGVAHIYASFNDTFIHITDLSGKETMVRVTGGMKVKADRDESSPYAAMLASQDVAVRAK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G ALRAL G I I D T +
Sbjct: 87 ELGITALHIKLRAMGGTRTKSPGPGAQQALRALARAGMKIGRIEDCTPVP 136
>gi|212543613|ref|XP_002151961.1| 40S ribosomal protein S11 [Penicillium marneffei ATCC 18224]
gi|210066868|gb|EEA20961.1| 40S ribosomal protein S11 [Penicillium marneffei ATCC 18224]
Length = 151
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D + +
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAVR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 136
>gi|39940004|ref|XP_359539.1| 40S ribosomal protein S14 [Magnaporthe oryzae 70-15]
gi|59802861|gb|AAX07644.1| 40S ribosomal protein S14-like protein [Magnaporthe grisea]
gi|145010486|gb|EDJ95142.1| 40S ribosomal protein S14 [Magnaporthe oryzae 70-15]
gi|291195759|gb|ADD84596.1| ribosomal protein S14.e [Magnaporthe oryzae]
Length = 150
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
MP P + + ++NI V G A + ++FN+T + +TD G TI +
Sbjct: 1 MP--PKKTQRPAQENISLGPQVREGELVFGVARIFASFNDTFVHVTDLSGRETICRVTGG 58
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 59 MKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTKTPGPGAQSALRAL 118
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 119 ARSGMKIGRIEDVTPTP 135
>gi|167957550|ref|ZP_02544624.1| 30S ribosomal protein S11 [candidate division TM7 single-cell
isolate TM7c]
Length = 130
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ + R ++R+++ SG+ H+ +TFNNT IT TD GN + SS GF GS+K +
Sbjct: 1 MAEAKTSARKKQRRSVPSGQLHIQATFNNTTITFTDKKGNALTASSAGACGFRGSKKGTA 60
Query: 61 FAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+AAQVA + + A++ HG+SS++V V G+G GRD+A+RA+ + T+ SI DVT + H
Sbjct: 61 YAAQVAAEKAAEAAKSLHGLSSVDVFVKGVGLGRDAAIRAMSNLDITVDSIKDVTGVPHG 120
Query: 120 GCRPRKRRR 128
G RP+K RR
Sbjct: 121 GVRPKKARR 129
>gi|310789537|gb|EFQ25070.1| ribosomal protein S11 [Glomerella graminicola M1.001]
Length = 151
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D + +
Sbjct: 25 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVATR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 136
>gi|297484712|ref|XP_002694606.1| PREDICTED: ribosomal protein S14-like [Bos taurus]
gi|296478616|gb|DAA20731.1| ribosomal protein S14-like [Bos taurus]
Length = 168
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 1 MPKSPSRIRNRER-----------KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M + + ER +N+ G H+ + FN+T + +TD G TI +
Sbjct: 18 MAPRKGKEKKEERVISLGPQVAEGENV-FGVCHIFAAFNDTFVHVTDLSGKETICRVTGG 76
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + + GM++L +K+ G G SALRAL
Sbjct: 77 MKVKADRDESSPYAAVLAAQDVDQRGKELGMTALHIKLQARGGNRTKTPGPGAQSALRAL 136
Query: 101 RAIGFTIVSICDVTMI 116
G I I DVT I
Sbjct: 137 DCSGMKIGRIEDVTPI 152
>gi|195172530|ref|XP_002027050.1| GL18171 [Drosophila persimilis]
gi|194112828|gb|EDW34871.1| GL18171 [Drosophila persimilis]
Length = 151
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVSLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVK--------VSGLGAGRDSALRALR 101
+ + SP+AA + D + K + G+++L +K G G ALRAL
Sbjct: 61 KVKADRDEASPYAAMLGAQDVAEKCKLLGITALNIKRRATGGNKTKTPGPGAQPALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|171687166|ref|XP_001908524.1| hypothetical protein [Podospora anserina S mat+]
gi|170943544|emb|CAP69197.1| unnamed protein product [Podospora anserina S mat+]
Length = 150
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 135
>gi|16082065|ref|NP_394491.1| 30S ribosomal protein S11P [Thermoplasma acidophilum DSM 1728]
gi|48474652|sp|Q9HJD8|RS11_THEAC RecName: Full=30S ribosomal protein S11P
gi|10640346|emb|CAC12160.1| probable 30S ribosomal protein S11 [Thermoplasma acidophilum]
Length = 130
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G AH+ ++ NNT I +TDP G TIA S +V + + SP+AA A D S +
Sbjct: 7 TGIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSEALKE 66
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
++ L +KV G G +A+RAL G IV I +VT I H+G
Sbjct: 67 KEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 119
>gi|294659789|ref|XP_462215.2| DEHA2G15466p [Debaryomyces hansenii CBS767]
gi|199434230|emb|CAG90709.2| DEHA2G15466p [Debaryomyces hansenii]
Length = 137
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D + K +
Sbjct: 13 VFGVARIFASFNDTFVHVTDLSGQETIARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 72
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G SALRAL G I I DVT +
Sbjct: 73 EVGITAVHVKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVP 122
>gi|68072747|ref|XP_678287.1| 40S ribosomal subunit protein S14 [Plasmodium berghei strain ANKA]
gi|56498705|emb|CAH97256.1| 40S ribosomal subunit protein S14, putative [Plasmodium berghei]
Length = 150
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 21 AHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+ + G+
Sbjct: 30 VHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAARLKELGV 89
Query: 80 SSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+++ +K+ G G SALRAL G I I DVT I
Sbjct: 90 TAIHIKLRASGGTKSKTPGPGAQSALRALARSGLKIGRIEDVTPIP 135
>gi|85109508|ref|XP_962951.1| 40S ribosomal protein S14 [Neurospora crassa OR74A]
gi|28924596|gb|EAA33715.1| 40S ribosomal protein S14 [Neurospora crassa OR74A]
Length = 150
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 135
>gi|295092572|emb|CBK78679.1| Ribosomal protein S11 [Clostridium cf. saccharolyticum K10]
Length = 65
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + + A HG+ S++V V G G+GR++A+RAL+A G + SI DVT + HNGCRP
Sbjct: 1 MAAETATKAALIHGLKSVDVMVKGPGSGREAAIRALQACGLEVTSIRDVTPVPHNGCRPP 60
Query: 125 KRRRI 129
KRRR+
Sbjct: 61 KRRRV 65
>gi|114554382|ref|XP_001159406.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
gi|114554384|ref|XP_001159463.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
gi|114554386|ref|XP_001159510.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
Length = 170
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRA 99
+ + ++SP+AA + T D + + + G+ +L +++ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRA 118
Query: 100 LRAIGFTIVSICDVTMI 116
L +G I I DVT I
Sbjct: 119 LACLGMKIGRIEDVTPI 135
>gi|195355994|ref|XP_002044468.1| GM11986 [Drosophila sechellia]
gi|194131633|gb|EDW53675.1| GM11986 [Drosophila sechellia]
Length = 151
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + +V G AH+ +FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVPLGPQVRDGEVVFGVAHIYPSFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALR 101
+ + SP+AA +A D + K + G+++L + + G G SALRAL
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHINLRATGGNKTKTRRPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 RSSMKIGRIEDVTPIP 136
>gi|326504050|dbj|BAK02811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M + + E+ + V AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPKRGQAKKEEQVVQLGPQVGAGDKVFCTAHIYASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D S ++ G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDESSPYAAMLAAQDVSEICKSFGINALHIKLRATGGNKSKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 RSGMKIGRIEDVTPTP 136
>gi|268324994|emb|CBH38582.1| 30S ribosomal protein S11P [uncultured archaeon]
Length = 129
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
I AH+ S+FNNT ITITD G TIA +S +V S ++SP+ A + K
Sbjct: 3 EIRWAVAHIYSSFNNTIITITDLPGAETIARASGGMVAKSDRDESSPYTAMQMATQLADK 62
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+ + L VKV G +A+RA G I I DVT + H+G +
Sbjct: 63 LKEREIRGLHVKVKAASGRKSRTTAPGAQAAIRAFGRAGIRIGKIEDVTPMPHDGTKRPG 122
Query: 126 RRR 128
+R
Sbjct: 123 GKR 125
>gi|302891971|ref|XP_003044867.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725792|gb|EEU39154.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 150
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPTP 135
>gi|115384692|ref|XP_001208893.1| 40S ribosomal protein S14 [Aspergillus terreus NIH2624]
gi|114196585|gb|EAU38285.1| 40S ribosomal protein S14 [Aspergillus terreus NIH2624]
Length = 149
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 23 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 82
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 83 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 134
>gi|226476062|emb|CAX72121.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226476064|emb|CAX72122.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226476066|emb|CAX72123.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226476068|emb|CAX72124.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480972|emb|CAX78951.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480974|emb|CAX78952.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480976|emb|CAX78953.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480978|emb|CAX78954.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480980|emb|CAX78955.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480982|emb|CAX78956.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480984|emb|CAX78957.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480986|emb|CAX78958.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480988|emb|CAX78959.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480990|emb|CAX78960.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480992|emb|CAX78961.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480994|emb|CAX78962.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480996|emb|CAX78963.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226480998|emb|CAX78964.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481000|emb|CAX78965.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481002|emb|CAX78966.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481004|emb|CAX78967.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481006|emb|CAX78968.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481008|emb|CAX78969.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481010|emb|CAX78970.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481012|emb|CAX78971.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481014|emb|CAX78972.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481016|emb|CAX78973.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481018|emb|CAX78974.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481020|emb|CAX78975.1| ribosomal protein S14 [Schistosoma japonicum]
gi|226481022|emb|CAX78976.1| ribosomal protein S14 [Schistosoma japonicum]
Length = 152
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 20/137 (14%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPK 48
M + + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MAAKRKGAKKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRAL 100
+ + ++SP+AA +A D + K + G+++L +++ G SALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVAEKCKALGINALHIRIRATGGTKVRTPSPAAQSALRAL 120
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 ARSGMRIGRIEDVTPIP 137
>gi|121715466|ref|XP_001275342.1| 40S ribosomal protein S11 [Aspergillus clavatus NRRL 1]
gi|119403499|gb|EAW13916.1| 40S ribosomal protein S11 [Aspergillus clavatus NRRL 1]
Length = 150
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERK---------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
MP + +E +V G A + ++FN+T + +TD G TI + +
Sbjct: 1 MPPKKTTTAAKENVSLGPLAGDGKLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D + + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVATRCKELGINALHIKIRATGGNGTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 SGMRIGRIEDVTPTP 135
>gi|116191629|ref|XP_001221627.1| 40S ribosomal protein S14 [Chaetomium globosum CBS 148.51]
gi|88181445|gb|EAQ88913.1| 40S ribosomal protein S14 [Chaetomium globosum CBS 148.51]
Length = 151
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPTP 136
>gi|119188601|ref|XP_001244907.1| 40S ribosomal protein S14 [Coccidioides immitis RS]
gi|303323707|ref|XP_003071845.1| 40S ribosomal protein S14, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111547|gb|EER29700.1| 40S ribosomal protein S14, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320031789|gb|EFW13747.1| 40S ribosomal protein S14 [Coccidioides posadasii str. Silveira]
Length = 151
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
++V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 SLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|296821354|ref|XP_002850097.1| 40S ribosomal protein S14 [Arthroderma otae CBS 113480]
gi|302508843|ref|XP_003016382.1| hypothetical protein ARB_05781 [Arthroderma benhamiae CBS 112371]
gi|315054621|ref|XP_003176685.1| 40S ribosomal protein S14 [Arthroderma gypseum CBS 118893]
gi|327307906|ref|XP_003238644.1| 40S ribosomal protein S14 [Trichophyton rubrum CBS 118892]
gi|238837651|gb|EEQ27313.1| 40S ribosomal protein S14 [Arthroderma otae CBS 113480]
gi|291179951|gb|EFE35737.1| hypothetical protein ARB_05781 [Arthroderma benhamiae CBS 112371]
gi|311338531|gb|EFQ97733.1| 40S ribosomal protein S14 [Arthroderma gypseum CBS 118893]
gi|326458900|gb|EGD84353.1| 40S ribosomal protein S14 [Trichophyton rubrum CBS 118892]
gi|326470637|gb|EGD94646.1| 40S ribosomal protein S14 [Trichophyton tonsurans CBS 112818]
gi|326479554|gb|EGE03564.1| 40S ribosomal protein S14 [Trichophyton equinum CBS 127.97]
Length = 152
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M +N+ V G A + ++FN+T + +TD G TI +
Sbjct: 1 MAPKKKTDAKPANENVSLGPLTGDGENVFGVARIFASFNDTFVHVTDLSGRETICRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVAARCKELGINALHIKIRATGGNGTKTPGPGAQSALRAL 120
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 ARSGMRIGRIEDVTPTP 137
>gi|227828306|ref|YP_002830086.1| 30S ribosomal protein S11P [Sulfolobus islandicus M.14.25]
gi|227831064|ref|YP_002832844.1| 30S ribosomal protein S11P [Sulfolobus islandicus L.S.2.15]
gi|229579945|ref|YP_002838344.1| 30S ribosomal protein S11P [Sulfolobus islandicus Y.G.57.14]
gi|229581394|ref|YP_002839793.1| 30S ribosomal protein S11P [Sulfolobus islandicus Y.N.15.51]
gi|229585536|ref|YP_002844038.1| 30S ribosomal protein S11P [Sulfolobus islandicus M.16.27]
gi|238620498|ref|YP_002915324.1| 30S ribosomal protein S11P [Sulfolobus islandicus M.16.4]
gi|284998560|ref|YP_003420328.1| ribosomal protein S11 [Sulfolobus islandicus L.D.8.5]
gi|227457512|gb|ACP36199.1| ribosomal protein S11 [Sulfolobus islandicus L.S.2.15]
gi|227460102|gb|ACP38788.1| ribosomal protein S11 [Sulfolobus islandicus M.14.25]
gi|228010660|gb|ACP46422.1| ribosomal protein S11 [Sulfolobus islandicus Y.G.57.14]
gi|228012110|gb|ACP47871.1| ribosomal protein S11 [Sulfolobus islandicus Y.N.15.51]
gi|228020586|gb|ACP55993.1| ribosomal protein S11 [Sulfolobus islandicus M.16.27]
gi|238381568|gb|ACR42656.1| ribosomal protein S11 [Sulfolobus islandicus M.16.4]
gi|284446456|gb|ADB87958.1| ribosomal protein S11 [Sulfolobus islandicus L.D.8.5]
gi|323475376|gb|ADX85982.1| ribosomal protein S11 [Sulfolobus islandicus REY15A]
gi|323478101|gb|ADX83339.1| ribosomal protein S11 [Sulfolobus islandicus HVE10/4]
Length = 132
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G AH+ ++ NNT ITI+D G I+ +S +V + K+SP+AA +A +
Sbjct: 3 SRREIRWGIAHIYASQNNTLITISDLTGAEIISRASGGMVVKADREKSSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
++ A G+ +L +KV G G A+RAL GF I I DVT I H+
Sbjct: 63 ASDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHD 119
>gi|71001392|ref|XP_755377.1| 40S ribosomal protein S11 [Aspergillus fumigatus Af293]
gi|119480991|ref|XP_001260524.1| 40S ribosomal protein S11 [Neosartorya fischeri NRRL 181]
gi|66853015|gb|EAL93339.1| 40S ribosomal protein S11 [Aspergillus fumigatus Af293]
gi|119408678|gb|EAW18627.1| 40S ribosomal protein S11 [Neosartorya fischeri NRRL 181]
gi|159129451|gb|EDP54565.1| 40S ribosomal protein S11 [Aspergillus fumigatus A1163]
Length = 150
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERK---------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
MP + +E +V G A + ++FN+T + +TD G TI + +
Sbjct: 1 MPPKKTTTAAKENVSLGPLAGDGKLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAARCKELGINALHIKIRATGGNGTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 SGMRIGRIEDVTPTP 135
>gi|302411023|ref|XP_003003345.1| 40S ribosomal protein S14 [Verticillium albo-atrum VaMs.102]
gi|261358369|gb|EEY20797.1| 40S ribosomal protein S14 [Verticillium albo-atrum VaMs.102]
Length = 151
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D + +
Sbjct: 25 ELVFGVARIFASFNDTFVHVTDLTGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAVR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDVTPTP 136
>gi|145232619|ref|XP_001399749.1| 40S ribosomal protein S14 [Aspergillus niger CBS 513.88]
gi|134056668|emb|CAK37661.1| unnamed protein product [Aspergillus niger]
Length = 150
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 135
>gi|169783484|ref|XP_001826204.1| 40S ribosomal protein S14 [Aspergillus oryzae RIB40]
gi|238493285|ref|XP_002377879.1| 40S ribosomal protein S11 [Aspergillus flavus NRRL3357]
gi|83774948|dbj|BAE65071.1| unnamed protein product [Aspergillus oryzae]
gi|220696373|gb|EED52715.1| 40S ribosomal protein S11 [Aspergillus flavus NRRL3357]
Length = 150
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 135
>gi|17369862|sp|Q9XEK6|RS14_TORRU RecName: Full=40S ribosomal protein S14
gi|4574240|gb|AAD23964.1|AF108724_1 ribosomal protein S14 [Syntrichia ruralis]
Length = 134
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWS-SPKVVGFSGSRKNSPFAAQVATDD 69
R + V G AH+ ++FN+T + +TD G + + + + + SP+AA +A D
Sbjct: 5 RRKVRAVFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQD 64
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ + + G+++L + V G G S LRAL G I I DVT I
Sbjct: 65 VAQRCKELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRIEDVTPIP 119
>gi|256080820|ref|XP_002576674.1| 40S ribosomal protein S14 [Schistosoma mansoni]
gi|238661953|emb|CAZ32911.1| 40S ribosomal protein S14, putative [Schistosoma mansoni]
Length = 152
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 20/137 (14%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPK 48
M R + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MAAKRKGARKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRAL 100
+ + ++SP+AA +A D + K + G+++L +++ G SALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVAEKCKTLGINALHIRIRATGGTKVRTPSPAAQSALRAL 120
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 ARSGMRIGRIEDVTPIP 137
>gi|145591857|ref|YP_001153859.1| 30S ribosomal protein S11P [Pyrobaculum arsenaticum DSM 13514]
gi|152060812|sp|A4WLE0|RS11_PYRAR RecName: Full=30S ribosomal protein S11P
gi|145283625|gb|ABP51207.1| SSU ribosomal protein S11P [Pyrobaculum arsenaticum DSM 13514]
Length = 138
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+ G A + S+ NNT ITITD G T+A S V + K SP+AA A +
Sbjct: 12 KLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQL 71
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
A G++++ +KV G G G +A+RAL G I I DVT I H+ RP
Sbjct: 72 AMARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDIIRPPS 131
Query: 125 --KRRRI 129
K RR+
Sbjct: 132 GRKGRRV 138
>gi|189204456|ref|XP_001938563.1| 40S ribosomal protein S14 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985662|gb|EDU51150.1| 40S ribosomal protein S14 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 148
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 1 MPKSPSRIRNRERKNI--------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVG 51
MP +++ ++NI V G A + ++FN+T + ITD G TI+ + +
Sbjct: 1 MP-PKAKVARAPQENIQLGPQGELVFGVARIFASFNDTFVHITDLSGRETISRVTGGMKV 59
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAI 103
+ ++SP+AA +A D +A+ + G+++L VK+ G G SALRAL
Sbjct: 60 KADRDESSPYAAMLAAQDVAARCKELGITALHVKIRATGGNGTKTPGPGAQSALRALARA 119
Query: 104 GFTIVSICDVTMIA 117
G I I DVT
Sbjct: 120 GMRIGRIEDVTPTP 133
>gi|48478293|ref|YP_023999.1| 30S ribosomal protein S11P [Picrophilus torridus DSM 9790]
gi|59798720|sp|Q6KZP6|RS11_PICTO RecName: Full=30S ribosomal protein S11P
gi|48430941|gb|AAT43806.1| small subunit ribosomal protein S11P [Picrophilus torridus DSM
9790]
Length = 127
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+G AH+ ++ NNT I +TDP G TIA SS +V + + SP+AA A D S K +
Sbjct: 4 TGIAHIYASQNNTIILVTDPTGAETIAKSSGGMVVKNDRDEASPYAAMRAADMVSEKLRE 63
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
++ L ++V G G SA+RAL GF I+ I +VT I H+G
Sbjct: 64 REITDLIIRVRAPGGSKSKIPGPGAQSAIRALSRAGFKILRIEEVTPIPHDGT 116
>gi|118431574|ref|NP_148136.2| 30S ribosomal protein S11P [Aeropyrum pernix K1]
gi|150421657|sp|Q9YB55|RS11_AERPE RecName: Full=30S ribosomal protein S11P
gi|116062899|dbj|BAA80743.2| 30S ribosomal protein S11P [Aeropyrum pernix K1]
Length = 133
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+FNNT + ITD G T+A + +V + K SP+AA +A +
Sbjct: 6 RELKWGVAHIYSSFNNTHVHITDLTGAETVARVTGGMVVKADREKPSPYAAMIAASRAAQ 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
KA G++++ +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 KAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 120
>gi|1350937|sp|P48855|RS14_PROCL RecName: Full=40S ribosomal protein S14
gi|434787|dbj|BAA03461.1| ribosomal protein [Procambarus clarkii]
Length = 151
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + V H+ +++N+T + +TD G TI +
Sbjct: 1 MAPRKGKVQKEEVQVQLGPQVLDGEKVFAVCHIYASYNDTFVHVTDLSGRETIVRITGGQ 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D + K ++ G++ L +K+ G G SALRAL
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 RAGMKIGRIEDVTPVP 136
>gi|258575795|ref|XP_002542079.1| 40S ribosomal protein S14 [Uncinocarpus reesii 1704]
gi|237902345|gb|EEP76746.1| 40S ribosomal protein S14 [Uncinocarpus reesii 1704]
Length = 151
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|255625645|gb|ACU13167.1| unknown [Glycine max]
gi|255641829|gb|ACU21183.1| unknown [Glycine max]
Length = 150
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G A + ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|67539580|ref|XP_663564.1| RS14_NEUCR 40S ribosomal protein S14 (CRP2) [Aspergillus nidulans
FGSC A4]
gi|40738633|gb|EAA57823.1| RS14_NEUCR 40S ribosomal protein S14 (CRP2) [Aspergillus nidulans
FGSC A4]
gi|259479864|tpe|CBF70478.1| TPA: 40S ribosomal protein S14 (Broad) [Aspergillus nidulans FGSC
A4]
Length = 149
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 23 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 82
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 83 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 134
>gi|154272227|ref|XP_001536966.1| 40S ribosomal protein S14 [Ajellomyces capsulatus NAm1]
gi|150408953|gb|EDN04409.1| 40S ribosomal protein S14 [Ajellomyces capsulatus NAm1]
gi|225556194|gb|EEH04483.1| 40S ribosomal protein S14 [Ajellomyces capsulatus G186AR]
gi|240276724|gb|EER40235.1| 40S ribosomal protein S14 [Ajellomyces capsulatus H143]
gi|325095243|gb|EGC48553.1| 40S ribosomal protein S14 [Ajellomyces capsulatus H88]
Length = 151
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|261192356|ref|XP_002622585.1| 40S ribosomal protein S14 [Ajellomyces dermatitidis SLH14081]
gi|239589460|gb|EEQ72103.1| 40S ribosomal protein S14 [Ajellomyces dermatitidis SLH14081]
gi|239615174|gb|EEQ92161.1| 40S ribosomal protein S14 [Ajellomyces dermatitidis ER-3]
gi|327349701|gb|EGE78558.1| 40S ribosomal protein S14 [Ajellomyces dermatitidis ATCC 18188]
Length = 151
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|17565042|ref|NP_506131.1| hypothetical protein W04D2.5 [Caenorhabditis elegans]
gi|3880459|emb|CAA99938.1| C. elegans protein W04D2.5, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 208
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ ++ NNT +T+ D I +S ++ GF +RK + A Q + G+
Sbjct: 99 LVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTTIAGQTTGVAAGQRLVRRGI 158
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V+V GLG GR + ++ L G +VSI D T + G RPRK RRI
Sbjct: 159 RTVRVQVKGLGPGRMTCVKGLTVAGVHVVSISDHTPLCELGPRPRKIRRI 208
>gi|154312364|ref|XP_001555510.1| 40S ribosomal protein S14 [Botryotinia fuckeliana B05.10]
gi|150850178|gb|EDN25371.1| 40S ribosomal protein S14 [Botryotinia fuckeliana B05.10]
Length = 150
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D + +
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVATR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L VK+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHVKIRATGGNGTKTPGPGAQSALRALARTGMKIGRIEDVTPTP 135
>gi|295671757|ref|XP_002796425.1| 40S ribosomal protein S14 [Paracoccidioides brasiliensis Pb01]
gi|225681410|gb|EEH19694.1| 30S ribosomal protein S11P [Paracoccidioides brasiliensis Pb03]
gi|226283405|gb|EEH38971.1| 40S ribosomal protein S14 [Paracoccidioides brasiliensis Pb01]
gi|226288534|gb|EEH44046.1| 40S ribosomal protein S14 [Paracoccidioides brasiliensis Pb18]
Length = 151
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 KLVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 136
>gi|156064165|ref|XP_001598004.1| 40S ribosomal protein S14 [Sclerotinia sclerotiorum 1980]
gi|154690952|gb|EDN90690.1| 40S ribosomal protein S14 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 150
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHIKIRATGGNGTKTPGPGAQSALRALARTGMKIGRIEDVTPTP 135
>gi|126465714|ref|YP_001040823.1| 30S ribosomal protein S11P [Staphylothermus marinus F1]
gi|152060823|sp|A3DMQ5|RS11_STAMF RecName: Full=30S ribosomal protein S11P
gi|126014537|gb|ABN69915.1| SSU ribosomal protein S11P [Staphylothermus marinus F1]
Length = 133
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+ NNT I ITD G T++ S +V + K SP+AA +A +A
Sbjct: 6 RELKWGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAA 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G+++L +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 EAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 120
>gi|195159942|ref|XP_002020835.1| GL16027 [Drosophila persimilis]
gi|194117785|gb|EDW39828.1| GL16027 [Drosophila persimilis]
Length = 151
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ S+FN+T + +TD G T+ + + + + SP+A +A D + K +
Sbjct: 27 VFGVVHIFSSFNDTFVHVTDLSGRETMVRVTGGMKVKADRDEVSPYADMLAAQDVAEKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L+V + G G SALRAL G I I D+T I
Sbjct: 87 ILGITALKVNLRATGGNKNKTPGPGGQSALRALARSGMKIGRIEDLTPIP 136
>gi|330917083|ref|XP_003297670.1| hypothetical protein PTT_08160 [Pyrenophora teres f. teres 0-1]
gi|311329506|gb|EFQ94228.1| hypothetical protein PTT_08160 [Pyrenophora teres f. teres 0-1]
Length = 151
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + ITD G TI+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVARIFASFNDTFVHITDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L VK+ G G SALRAL G I I DVT
Sbjct: 85 CKELGITALHVKIRATGGNGTKTPGPGAQSALRALARAGMRIGRIEDVTPTP 136
>gi|46111319|ref|XP_382717.1| RS14_NEUCR 40S ribosomal protein S14 (CRP2) [Gibberella zeae PH-1]
Length = 151
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVARIFASFNDTFVHVTDLSGRETITRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPTP 136
>gi|322694141|gb|EFY85979.1| 40S ribosomal protein S14 (CRP2) [Metarhizium acridum CQMa 102]
gi|322710753|gb|EFZ02327.1| 40S ribosomal protein S14 (CRP2) [Metarhizium anisopliae ARSEF 23]
Length = 150
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETITRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPTP 135
>gi|284162137|ref|YP_003400760.1| ribosomal protein S11 [Archaeoglobus profundus DSM 5631]
gi|284012134|gb|ADB58087.1| ribosomal protein S11 [Archaeoglobus profundus DSM 5631]
Length = 131
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+K G AH+ S++NNT ITITD G TIA S ++ + + +P+ A A +
Sbjct: 3 KKGGKWGIAHIFSSYNNTIITITDITGSETIARVSGGMIVKADRDEGNPYTAMQAALRAA 62
Query: 72 AKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
A+ G+ + +KV G G +A+RAL G I I DVT I H+G RP
Sbjct: 63 EIAKEKGIEGVHIKVRAPGGNKHITPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTRP 122
Query: 124 RKRRR 128
+R
Sbjct: 123 PGGKR 127
>gi|255628901|gb|ACU14795.1| unknown [Glycine max]
Length = 150
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M + R E + V G A + ++FN+T I +TD G T+ + +
Sbjct: 1 MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D +A+ + G+++L +++ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAARCKELGITALHIRLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMKIGRIEDVTPIP 135
>gi|6322270|ref|NP_012344.1| Rps14bp [Saccharomyces cerevisiae S288c]
gi|730453|sp|P39516|RS14B_YEAST RecName: Full=40S ribosomal protein S14-B; AltName: Full=RP59B
gi|295650|gb|AAA17764.1| ribosomal protein 59 [Saccharomyces cerevisiae]
gi|1008402|emb|CAA89486.1| CRY2 [Saccharomyces cerevisiae]
gi|151944942|gb|EDN63197.1| ribosomal protein S14B [Saccharomyces cerevisiae YJM789]
gi|190409324|gb|EDV12589.1| ribosomal protein S14B [Saccharomyces cerevisiae RM11-1a]
gi|285812718|tpg|DAA08616.1| TPA: Rps14bp [Saccharomyces cerevisiae S288c]
gi|290771046|emb|CBK33715.1| Rps14bp [Saccharomyces cerevisiae EC1118]
Length = 138
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 14 VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 73
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 74 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVP 123
>gi|297527613|ref|YP_003669637.1| ribosomal protein S11P [Staphylothermus hellenicus DSM 12710]
gi|297256529|gb|ADI32738.1| ribosomal protein S11P [Staphylothermus hellenicus DSM 12710]
Length = 130
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+ NNT I ITD G T++ S +V + K SP+AA +A +A
Sbjct: 3 RELKWGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAA 62
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G+++L +KV G G +A+RAL GF I I DVT I H+
Sbjct: 63 EAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 117
>gi|222446777|gb|ACM51433.1| ribosomal protein S11 [Caulerpa filiformis]
Length = 120
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN--HG 78
++ + NNT I +T+ GN + W + GF G+RK +PFAAQ D K +
Sbjct: 11 IYIRAPLNNTGIILTNFRGNVLNWVTAGSCGFKGARKATPFAAQTVVDMFRTKTIDPREK 70
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ + +SG+G GR++ALR L+ + I I D+T + HNGCR K+RR
Sbjct: 71 CREIHLYISGIGPGRETALRGLKKLK-KITVIRDITPLPHNGCRLXKKRR 119
>gi|146317754|ref|YP_001197466.1| 30S ribosomal protein S11 [Streptococcus suis 05ZYH33]
gi|145688560|gb|ABP89066.1| 30S ribosomal protein S11 [Streptococcus suis 05ZYH33]
Length = 86
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 40 NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRA 99
I+W S F SRK++PFAAQ+A++ + AQ HG+ ++EV V G G+GR+SA+RA
Sbjct: 1 MVISWCSW----FQRSRKSTPFAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRA 56
Query: 100 LRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
L A G + +I DVT + HNG RP KRRR+
Sbjct: 57 LAAAGLEVTAIRDVTPVPHNGARPPKRRRV 86
>gi|15897039|ref|NP_341644.1| 30S ribosomal protein S11P [Sulfolobus solfataricus P2]
gi|284173383|ref|ZP_06387352.1| 30S ribosomal protein S11P [Sulfolobus solfataricus 98/2]
gi|2500441|sp|P95988|RS11_SULSO RecName: Full=30S ribosomal protein S11P
gi|1707822|emb|CAA69530.1| ribosomal protein S14 [Sulfolobus solfataricus P2]
gi|13813204|gb|AAK40434.1| SSU ribosomal protein S11AB (rps11AB) [Sulfolobus solfataricus P2]
gi|261601693|gb|ACX91296.1| ribosomal protein S11P [Sulfolobus solfataricus 98/2]
Length = 132
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G AH+ ++ NNT +TI+D G I+ +S +V + K+SP+AA +A +
Sbjct: 3 SRREIRWGIAHIYASQNNTLLTISDLTGAEIISRASGGMVVKADREKSSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
++ A G+ +L +KV G G A+RAL GF I I DVT I H+
Sbjct: 63 ASDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHD 119
>gi|241250524|ref|XP_002403273.1| ribosomal protein S11, putative [Ixodes scapularis]
gi|215496465|gb|EEC06105.1| ribosomal protein S11, putative [Ixodes scapularis]
Length = 219
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWS------SPKVVGFSGSRKNSPFAAQVATDDCSAK 73
H+ + NNT + +TD G W G+ +RK + AAQ A S+
Sbjct: 105 ICHIKCSLNNTILALTDRTG-PCCWVLILPSLKQGTEGYKNARKGTTVAAQAAALSFSSV 163
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+ + ++ V V GLG GR ++++ L+ G +VSI D T RPRK +R+
Sbjct: 164 AELRAIKNIRVIVKGLGPGRLASIKGLQMGGLNVVSITDRTPAPEKCPRPRKAKRL 219
>gi|327400271|ref|YP_004341110.1| 30S ribosomal protein S11P [Archaeoglobus veneficus SNP6]
gi|327315779|gb|AEA46395.1| ribosomal protein S11P [Archaeoglobus veneficus SNP6]
Length = 134
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ G AH+ S++NNT ITITD G TIA S ++ + + +P+ A A
Sbjct: 4 KKKGKGRWGIAHIFSSYNNTIITITDITGSETIARISGGMIVKADRDEGNPYTAMQAALR 63
Query: 70 CSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ A+ G+ + +KV G G +A+RAL G I I DVT I H+G
Sbjct: 64 VAEMAKEKGIEGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 123
Query: 122 RPRKRRR 128
RP +R
Sbjct: 124 RPPGGKR 130
>gi|50293435|ref|XP_449129.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528442|emb|CAG62099.1| unnamed protein product [Candida glabrata]
Length = 135
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK
Sbjct: 11 VFGVARIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCL 70
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 71 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVP 120
>gi|51702131|sp|Q96W53|RS14_CANAL RecName: Full=40S ribosomal protein S14
gi|14326104|gb|AAK60142.1|AF365406_4 ribosomal protein S14 [Candida albicans]
Length = 134
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
++ V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +A
Sbjct: 7 RSQVFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAA 66
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
K + G++++ +K+ G G SALRAL G I I DVT +
Sbjct: 67 KCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVP 119
>gi|242212528|ref|XP_002472097.1| 40S ribosomal protein S14 [Postia placenta Mad-698-R]
gi|242219641|ref|XP_002475598.1| 40S ribosomal protein S14 [Postia placenta Mad-698-R]
gi|220725215|gb|EED79212.1| 40S ribosomal protein S14 [Postia placenta Mad-698-R]
gi|220728827|gb|EED82713.1| 40S ribosomal protein S14 [Postia placenta Mad-698-R]
Length = 150
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRE---------RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M ++ E +V G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPKKTKAPKEEAVSLGPQVAEGELVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG--------RDSALRALRA 102
+ ++SP+AA +A D + + + G+++L VK+ G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVATRCREVGITALHVKLRATGGTGTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 121 SGMRIGRIEDVTPIP 135
>gi|50881465|gb|AAT85310.1| small subunit ribosomal protein, putative [Oryza sativa Japonica
Group]
Length = 366
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 4 SPSRIRNRERKNIVSGR---AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNS 59
+PSRI + ++++V G+ HV+ N T +T+TD GN +S + G + S
Sbjct: 227 TPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLS 286
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSG---LGAGRDSALRALRAIGFT-------IVS 109
+AA+ + A+ G+ S+ +KV G + L +V
Sbjct: 287 KYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGFRGERVREQSPVVL 346
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCR K+RR+
Sbjct: 347 IHDVTQLPHNGCRLPKQRRV 366
>gi|254580373|ref|XP_002496172.1| ZYRO0C12144p [Zygosaccharomyces rouxii]
gi|186703638|emb|CAQ43250.1| 40S ribosomal protein S14-A and 40S ribosomal protein S14-B
[Zygosaccharomyces rouxii]
gi|186703853|emb|CAQ43540.1| 40S ribosomal protein S14-A and 40S ribosomal protein S14-B
[Zygosaccharomyces rouxii]
gi|238939063|emb|CAR27239.1| ZYRO0C12144p [Zygosaccharomyces rouxii]
Length = 139
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M K + V G A + ++FN+T + +TD G T+ + + + +++
Sbjct: 1 MAKDSVVQARDASQ--VFGVARIFASFNDTFVHVTDLSGQETVCRVTGGMKVKADRDEST 58
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A D + + + G++++ VK+ G G +ALRAL G I I
Sbjct: 59 PYAAMLAAQDVAVRCKEVGITAVHVKIRATGGTKTKTPGPGGQAALRALARSGLRIGRIE 118
Query: 112 DVTMIA 117
DVT +
Sbjct: 119 DVTPVP 124
>gi|312082038|ref|XP_003143279.1| ribosomal protein S11 containing protein [Loa loa]
gi|307761557|gb|EFO20791.1| ribosomal protein S11 containing protein [Loa loa]
Length = 205
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV ++ NNT IT+TD N I ++S ++ GF +RK + A Q + G+
Sbjct: 96 IVHVKASRNNTLITVTDHKYNIITYTSCRLEGFKNARKKTNIAGQTTGVAAGQRLIRRGI 155
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V + GLG GR ++++ + G IVSI + + + G RP+K RI
Sbjct: 156 RTVRVLIRGLGPGRMTSIQGMATAGVKIVSITEQSALPELGPRPKKIPRI 205
>gi|241949083|ref|XP_002417264.1| 40S ribosomal protein S14, fragment pseudogene, putative; 40S
ribosomal protein S14, pseudogene, putative [Candida
dubliniensis CD36]
gi|223640602|emb|CAX44876.1| 40S ribosomal protein S14, fragment pseudogene, putative [Candida
dubliniensis CD36]
Length = 135
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
++ V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +A
Sbjct: 8 RSQVFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAA 67
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
K + G++++ +K+ G G SALRAL G I I DVT +
Sbjct: 68 KCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVP 120
>gi|198475586|ref|XP_002132960.1| GA26109 [Drosophila pseudoobscura pseudoobscura]
gi|198138889|gb|EDY70362.1| GA26109 [Drosophila pseudoobscura pseudoobscura]
Length = 151
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ S+FN+T + +TD G T+A + + + + SP+AA +A D +AK +
Sbjct: 27 VFGVVHIFSSFNDTFVHVTDLSGRETMARVTGGMKVKADRDEASPYAAMLAAQDVAAKCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L+V + G G SALRAL G I I D+T I
Sbjct: 87 ILGITALKVNLRATGGNKNKTPGPGGQSALRALARSGMKIGRIEDLTPIP 136
>gi|186703627|emb|CAQ43240.1| 40S ribosomal protein S14-A and 40S ribosomal protein S14-B
[Zygosaccharomyces rouxii]
Length = 139
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M K + V G A + ++FN+T + +TD G T+A + + + +++
Sbjct: 1 MAKDSVVQARDASQ--VFGVARIFASFNDTFVHVTDLSGQETVARVTGGMKVKADRDEST 58
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
P+AA +A D +A+ + G++++ VK+ G G +ALRAL G I I
Sbjct: 59 PYAAMLAAQDVAARCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIE 118
Query: 112 DVTMIA 117
DVT +
Sbjct: 119 DVTPVP 124
>gi|254568562|ref|XP_002491391.1| Ribosomal protein 59 of small subunit, required for ribosome
assembly and 20S pre-rRNA processing [Pichia pastoris
GS115]
gi|238031188|emb|CAY69111.1| Ribosomal protein 59 of small subunit, required for ribosome
assembly and 20S pre-rRNA processing [Pichia pastoris
GS115]
gi|328352097|emb|CCA38496.1| 40S ribosomal protein S14 [Pichia pastoris CBS 7435]
Length = 144
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 20 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 79
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G SALRAL G I I DVT +
Sbjct: 80 EVGITAVHVKLRATGGTSTKTPGPGGQSALRALARSGLRIGRIEDVTPVP 129
>gi|169598564|ref|XP_001792705.1| hypothetical protein SNOG_02088 [Phaeosphaeria nodorum SN15]
gi|160704422|gb|EAT90300.2| hypothetical protein SNOG_02088 [Phaeosphaeria nodorum SN15]
Length = 151
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + ITD G TI+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVARIFASFNDTFVHITDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S+L VK+ G G SALRAL G I I DVT
Sbjct: 85 CKELGISALHVKIRATGGNGTKTPGPGAQSALRALARAGMRIGRIEDVTPTP 136
>gi|10383793|ref|NP_009960.2| Rps14ap [Saccharomyces cerevisiae S288c]
gi|46397814|sp|P06367|RS14A_YEAST RecName: Full=40S ribosomal protein S14-A; AltName: Full=RP59A
gi|313103674|pdb|3IZB|K Chain K, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113455|pdb|3O2Z|H Chain H, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113483|pdb|3O30|H Chain H, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|14588942|emb|CAC42981.1| 40S Ribosomal protein S14.e [Saccharomyces cerevisiae]
gi|151943851|gb|EDN62151.1| ribosomal protein S14A [Saccharomyces cerevisiae YJM789]
gi|190406466|gb|EDV09733.1| ribosomal protein S14A [Saccharomyces cerevisiae RM11-1a]
gi|259144972|emb|CAY78237.1| Rps14ap [Saccharomyces cerevisiae EC1118]
gi|285810726|tpg|DAA07510.1| TPA: Rps14ap [Saccharomyces cerevisiae S288c]
Length = 137
Score = 99.9 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 13 VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 73 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVP 122
>gi|330798166|ref|XP_003287126.1| 40S ribosomal protein S14 [Dictyostelium purpureum]
gi|325082904|gb|EGC36372.1| 40S ribosomal protein S14 [Dictyostelium purpureum]
Length = 152
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD TI + + + ++SP+AA +A D +A+
Sbjct: 26 ELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKVKTDRDESSPYAATMAAQDVAAR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR- 124
+ G+++L +K+ G G SALRAL G I I DVT I + R +
Sbjct: 86 CKEIGITALHIKLRATGGNGSKTPGPGAQSALRALARSGMRIGRIEDVTGIPTDSTRRKS 145
Query: 125 --KRRRI 129
+ RR+
Sbjct: 146 GHRGRRL 152
>gi|312219819|emb|CBX99761.1| similar to 40S ribosomal protein S14 [Leptosphaeria maculans]
Length = 151
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + ITD G TI+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVARIFASFNDTFVHITDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S+L VK+ G G SALRAL G I I DVT
Sbjct: 85 CKELGISALHVKIRATGGNGTKTPGPGAQSALRALARAGMRIGRIEDVTPTP 136
>gi|3122785|sp|O22584|RS14_LUPLU RecName: Full=40S ribosomal protein S14
gi|2565340|gb|AAB81972.1| ribosomal protein S14 [Lupinus luteus]
Length = 150
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T I +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 26 VFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK 85
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 86 ELGITALHIKLRATGGNKTKTPGRGAQSALRALARSGMKIGRIEDVTPIP 135
>gi|255716192|ref|XP_002554377.1| KLTH0F03850p [Lachancea thermotolerans]
gi|238935760|emb|CAR23940.1| KLTH0F03850p [Lachancea thermotolerans]
Length = 137
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TI+ + + + ++SP+AA +A D +AK +
Sbjct: 13 VFGVARIYASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L VK+ G G +ALRAL G I I DVT +
Sbjct: 73 EVGITALHVKIRATGGTKTKTPGPGGQAALRALARSGMRIGRIEDVTPVP 122
>gi|49258830|pdb|1S1H|K Chain K, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 136
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 12 VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCR 71
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 72 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVP 121
>gi|171322|gb|AAA34530.1| small ribosomal protein 59 [Saccharomyces cerevisiae]
Length = 137
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 13 VFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCR 72
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 73 EVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVP 122
>gi|237832345|ref|XP_002365470.1| 40s ribosomal protein S14, putative [Toxoplasma gondii ME49]
gi|211963134|gb|EEA98329.1| 40s ribosomal protein S14, putative [Toxoplasma gondii ME49]
gi|221481730|gb|EEE20106.1| 40S ribosomal protein S14, putative [Toxoplasma gondii GT1]
Length = 156
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 30 EIVFGVAHIYASFNDTFIHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMMAAADVAAR 89
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S++ VKV G G SALRAL G I I DVT I
Sbjct: 90 CKELGISAVHVKVRAAGGTRSKTPGPGAQSALRALARSGLRIGRIEDVTPIP 141
>gi|296423581|ref|XP_002841332.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637569|emb|CAZ85523.1| unnamed protein product [Tuber melanosporum]
Length = 151
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++ +E +V G A + ++FN+T + +TD G TI + +
Sbjct: 1 MAPKGRKVERKEENISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETIVRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALR 101
+ ++SP+AA +A D +A+ + G+++L +K+ G G SALRAL
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAARCKEVGVTALHIKIRATGGNGTKTPGPGAQSALRALA 120
Query: 102 AIGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 RAGMRIGRIEDVTPTP 136
>gi|289619962|emb|CBI53406.1| unnamed protein product [Sordaria macrospora]
Length = 150
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETICRVTGGMKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHIKIRATGGNGTKTPRPGAQSALRALARSGMKIGRIEDVTPTP 135
>gi|71024103|ref|XP_762281.1| hypothetical protein UM06134.1 [Ustilago maydis 521]
gi|46101783|gb|EAK87016.1| hypothetical protein UM06134.1 [Ustilago maydis 521]
Length = 294
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
+ S+ NNT +T+T P G+ +A +S VGF S ++ A A K
Sbjct: 177 LFINSSRNNTILTLTSPSGDPLASASGGSVGFKKSARSGYEAGYRAAFAMFGKINEFKDA 236
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
M +EV +G G GR++ RAL +A I + D T I G RP+KRR
Sbjct: 237 WRMQHVEVLWNGFGQGREAVFRALLAGEGQATKELISKMTDKTPIKIGGVRPKKRR 292
>gi|146182837|ref|XP_001025389.2| ribosomal protein S11 containing protein [Tetrahymena thermophila]
gi|319443366|pdb|2XZM|K Chain K, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443401|pdb|2XZN|K Chain K, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|146143699|gb|EAS05144.2| ribosomal protein S11 containing protein [Tetrahymena thermophila
SB210]
gi|315570319|tpg|DAA33978.1| TPA_exp: 40S ribosomal protein rpS14e [Tetrahymena thermophila]
Length = 151
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+++T+N+T I +TD G T+ + + + ++SP+AA A D + +
Sbjct: 27 VFGVCHIMATWNDTFIHVTDLSGRETLVRVTGGMKVKADREESSPYAAMQAAIDVVNRCK 86
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+++L +K+ G G SALRAL G I I DVT I
Sbjct: 87 ELKINALHIKLRAKGGVETKQPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|156847920|ref|XP_001646843.1| hypothetical protein Kpol_2002p56 [Vanderwaltozyma polyspora DSM
70294]
gi|156117524|gb|EDO18985.1| hypothetical protein Kpol_2002p56 [Vanderwaltozyma polyspora DSM
70294]
Length = 134
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D + K +
Sbjct: 10 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAVKCK 69
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ VK+ G G +ALRAL G I I DVT +
Sbjct: 70 EVGITAVHVKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVP 119
>gi|50303845|ref|XP_451869.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|133777|sp|P27069|RS14_KLULA RecName: Full=40S ribosomal protein S14; AltName: Full=RP59
gi|320169|pir||S30002 ribosomal protein S14.e, cytosolic - yeast (Kluyveromyces
marxianus)
gi|2897|emb|CAA42520.1| ribosomal protein 59 [Kluyveromyces lactis]
gi|263483|gb|AAB24899.1| RP59 [Kluyveromyces marxianus]
gi|49641001|emb|CAH02262.1| KLLA0B07623p [Kluyveromyces lactis]
Length = 137
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 13 VFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ +K+ G G +ALRAL G I I DVT +
Sbjct: 73 EVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVP 122
>gi|281209138|gb|EFA83313.1| 40S ribosomal protein S14 [Polysphondylium pallidum PN500]
Length = 152
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V AH+ ++FN+T + ITD TI + + + ++SP+AA +A D +A+ +
Sbjct: 28 VFAVAHIFASFNDTFVHITDISSKETIVRVTGGMKVKTDRDESSPYAATMAAQDVAARCK 87
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT +
Sbjct: 88 EIGITALHIKLRATGGQGSKTPGPGAQSALRALARSGMKIGRIEDVTPVP 137
>gi|126132392|ref|XP_001382721.1| 40S ribosomal protein S14-B (RP59B) [Scheffersomyces stipitis CBS
6054]
gi|126094546|gb|ABN64692.1| 40S ribosomal protein S14-B (RP59B) [Scheffersomyces stipitis CBS
6054]
Length = 136
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T + +TD G TIA + + + ++SP+AA +A D +AK +
Sbjct: 12 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 71
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G++++ +K+ G G SALRAL G I I DVT +
Sbjct: 72 EVGITAVHIKIRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVP 121
>gi|115453305|ref|NP_001050253.1| Os03g0385900 [Oryza sativa Japonica Group]
gi|108708513|gb|ABF96308.1| ribosomal protein S11 containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548724|dbj|BAF12167.1| Os03g0385900 [Oryza sativa Japonica Group]
gi|215706382|dbj|BAG93238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 332
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 4 SPSRIRNRERKNIVSGR---AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNS 59
+PSRI + ++++V G+ HV+ N T +T+TD GN +S + G + S
Sbjct: 193 TPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLS 252
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSG---LGAGRDSALRALRAIGFT-------IVS 109
+AA+ + A+ G+ S+ +KV G + L +V
Sbjct: 253 KYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGFRGERVREQSPVVL 312
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCR K+RR+
Sbjct: 313 IHDVTQLPHNGCRLPKQRRV 332
>gi|218884675|ref|YP_002429057.1| 30S ribosomal protein S11P [Desulfurococcus kamchatkensis 1221n]
gi|218766291|gb|ACL11690.1| 30S ribosomal protein S11P [Desulfurococcus kamchatkensis 1221n]
Length = 133
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G AH+ S+ NNT I ITD G T++ S +V + K SP+AA +A +
Sbjct: 6 RELKWGVAHIYSSPNNTIIHITDISGAETVSRISGGMVVKADREKPSPYAAMMAAARAAT 65
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A + G+++L +KV G G +A+RAL GF I I DVT I H+
Sbjct: 66 QAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHD 120
>gi|308072477|dbj|BAJ22100.1| ribosomal protein S11 [Cycas taitungensis]
Length = 193
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG--FSGSRKNSP 60
R R + + + H NNT +T+TD GN +S + GSR+++
Sbjct: 65 SERQRDREKNKDFVHFLLIH-----NNTFVTVTDDKGNKKTGASAGCLEEIQGGSRRSTK 119
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG---LGAGRDSALRALRAIGFT--IVSICDVTM 115
+AA+ + A+N GM S+ V+V G G + L + +G I+ I DVT
Sbjct: 120 YAAEATAEHVGRSAKNLGMKSVVVEVKGSTYFGKKKAVILSFRKGVGRKSLIMHIHDVTQ 179
Query: 116 IAHNGCRPRKRRRI 129
++HNGCR ++RR+
Sbjct: 180 LSHNGCRLPRKRRV 193
>gi|113170477|ref|YP_717268.1| Rps11 [Ostreococcus tauri]
gi|112806884|emb|CAL36390.1| unnamed protein product [Ostreococcus tauri]
Length = 121
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 66/119 (55%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
+++ + + +T NNT + +TD GNT+ S +GF GS+K+S +AAQ T+
Sbjct: 3 KKKPMNQTAILCISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSKKSSSYAAQSTTEKV 62
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ L +K+ G+G +D++L+ + F IV I + T A NGCR +K+RRI
Sbjct: 63 LQFCAQQSIEKLMIKLRGVGYAKDASLKTVLNQNFKIVHIQETTQRAFNGCRQKKKRRI 121
>gi|17221659|dbj|BAB78484.1| ribosome like protein [Marsupenaeus japonicus]
Length = 151
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 1 MPKSPSRIRN-----------RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPK 48
M +++ RE +N+ H+ +++N+T + +TD G TI +
Sbjct: 1 MAPRKGKVQKEEVHVSLGPQVREGENV-FAVCHIYASYNDTFVHVTDLSGRETIVRITGG 59
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ ++SP+AA +A D S K ++ G+++L VK+ G G SALRAL
Sbjct: 60 QKVKADRDESSPYAAMLAAQDVSEKCKSLGINALHVKIRATGGNKTKTPGPGGQSALRAL 119
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 120 ARSGMKIGRIEDVTPVP 136
>gi|297818906|ref|XP_002877336.1| hypothetical protein ARALYDRAFT_905550 [Arabidopsis lyrata subsp.
lyrata]
gi|297323174|gb|EFH53595.1| hypothetical protein ARALYDRAFT_905550 [Arabidopsis lyrata subsp.
lyrata]
Length = 312
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWS-SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ NNT +T+TD GN + S + G RK + + A ++ +A+ G
Sbjct: 193 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 252
Query: 79 MSSLEVKVSGL---GAGRDSALR---ALRAIGF---TIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ VKV+G G + + + IV I D T AHNGCR K+RR+
Sbjct: 253 LKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPKKRRV 312
>gi|210075665|ref|XP_502457.2| YALI0D05753p [Yarrowia lipolytica]
gi|199425771|emb|CAG80645.2| YALI0D05753p [Yarrowia lipolytica]
Length = 144
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + ITD G TI+ + + + +N+P+AA +A D K
Sbjct: 18 ELVFGVARIFASFNDTFVHITDLTGRETISRVTGGMKVKADRDENTPYAAMLAAQDAVEK 77
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ G+++L +++ G G SA+RAL G I I DVT +
Sbjct: 78 AKEVGINALHIRIRATGGTSTKTPGPGCQSAVRALARAGMRIGRIEDVTPVP 129
>gi|297851618|ref|XP_002893690.1| hypothetical protein ARALYDRAFT_890737 [Arabidopsis lyrata subsp.
lyrata]
gi|297339532|gb|EFH69949.1| hypothetical protein ARALYDRAFT_890737 [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWS-SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ NNT +T+TD GN + S + G RK + + A ++ +A+ G
Sbjct: 194 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 253
Query: 79 MSSLEVKVSGL---GAGRDSALR---ALRAIGF---TIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ VKV+G G + + + IV I D T AHNGCR K+RR+
Sbjct: 254 LKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPKKRRV 313
>gi|289065167|ref|YP_003434219.1| ribosomal protein S11 [Chattonella marina]
gi|288871879|dbj|BAI70566.1| ribosomal protein S11 [Chattonella marina]
Length = 159
Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 55/121 (45%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
++ + G + T NT T+TD G S +VG+ S+ + F Q A
Sbjct: 30 TNKKKPLIKLDGILYGQFTNQNTIFTLTDLKGKVKTTLSNGMVGYKNSKSKTRFGTQAAA 89
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ S KA+ G + + G GR + L+ G TI +I D T HNGCRP+K +
Sbjct: 90 ERISQKAKALGFYFITFIMKGKNKGRRKCVLTLQKSGLTIKNIFDQTPTIHNGCRPKKEK 149
Query: 128 R 128
R
Sbjct: 150 R 150
>gi|326435278|gb|EGD80848.1| ribosomal protein S14 [Salpingoeca sp. ATCC 50818]
Length = 142
Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 1 MPKSPSRIRNRERK-NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKN 58
M K ++ + +V G AH+ +++N+T + +TD G T+ + + + ++
Sbjct: 1 MSKETPQLGPDVKDGELVFGVAHIFASYNDTFVHVTDLSGKETMVRVTGGMKVKADRDES 60
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSI 110
SP+AA +A D +A+ + G+++L +K+ G G SALRAL G I I
Sbjct: 61 SPYAAMLAAQDAAARCKELGITALHIKLRATGGVRSKTPGPGAQSALRALARSGLRIGRI 120
Query: 111 CDVTMIA 117
DVT I
Sbjct: 121 EDVTPIP 127
>gi|325117085|emb|CBZ52637.1| hypothetical protein NCLIV_024250 [Neospora caninum Liverpool]
Length = 158
Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
IV G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 32 EIVFGVAHIYASFNDTFIHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMMAAADVAAR 91
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+S++ VKV G G SALRAL G I I DVT I
Sbjct: 92 CKELGISAVHVKVRAAGGTRSKTPGPGAQSALRALARSGMRIGRIEDVTPIP 143
>gi|255638431|gb|ACU19525.1| unknown [Glycine max]
Length = 329
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 21 AHVVSTFNNTRITITDPHGNTI-AWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ NNT +T+TD GN + S+ + +K S +AA+ + KA+ G+
Sbjct: 210 VHIKMLRNNTFVTVTDSKGNIKLSGSAGPLKDLKSGQKLSRYAAEATAEVVGRKARGLGL 269
Query: 80 SSLEVKVSGLGAGRD--SALRALR--------AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S+ +KV+G R +A+ + + IV I D T HNGCR K+RRI
Sbjct: 270 KSVVMKVNGFTHFRRKRNAIMSWKEGFTAGSRGDRNPIVYIEDTTRKPHNGCRLPKKRRI 329
>gi|44888985|sp|P19115|RS14_NEUCR RecName: Full=40S ribosomal protein S14; AltName: Full=CRP2
gi|14140107|emb|CAA37766.2| ribosomal protein crp-2 [Neurospora crassa]
Length = 150
Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIA-WSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + +TD G + + ++SP+AA +A D +A+
Sbjct: 24 ELVFGVARIFASFNDTFVHVTDLSGRETTDRVIGGIKVKADRDESSPYAAMLAAQDVAAR 83
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT
Sbjct: 84 CKELGITALHIKIRATGGNGTRTPGPGAQSALRALARSGMKIGRIEDVTPTP 135
>gi|321461549|gb|EFX72580.1| hypothetical protein DAPPUDRAFT_326134 [Daphnia pulex]
Length = 159
Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
+ +T NNT +T+++ G S GF +R+ + AAQ + + GM
Sbjct: 49 ICDINATPNNTIMTLSNSAGCVKIIHSCGREGFKNTREGTNIAAQATGITLATRGIGIGM 108
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG-CRPRKRRRI 129
++ V V+GLG GR +A++ L G +VSI D T + RP+KRR++
Sbjct: 109 KTVRVTVAGLGPGRMAAIKGLTMGGMNVVSITDKTPVPWVAYPRPKKRRKL 159
>gi|300120857|emb|CBK21099.2| unnamed protein product [Blastocystis hominis]
Length = 162
Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 2 PKSPSRIRNRER---KNIVSG-----RAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
PK + + + + +N+ G H+ ++FN+T I +TD G T+ + +
Sbjct: 15 PKKERQEKEQIKLGPQNVREGEEVFAVTHIYASFNDTFIHVTDMSGRETLVRVTGGMKVK 74
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIG 104
+ ++SP+AA +A D +A+ + G++++ +K+ G G +ALRAL G
Sbjct: 75 ADRDESSPYAAMLAAQDVAARCKELGITAMHIKLRATGGNGTTSPGPGAQAALRALARAG 134
Query: 105 FTIVSICDVTMIAHNGCRPRKRRR 128
I I DVT I + R + RR
Sbjct: 135 MKIGRIEDVTPIPTDSTRKPQGRR 158
>gi|300175009|emb|CBK20320.2| unnamed protein product [Blastocystis hominis]
Length = 162
Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 2 PKSPSRIRNRER---KNIVSG-----RAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
PK + + + + +N+ G H+ ++FN+T I +TD G T+ + +
Sbjct: 15 PKKERQEKEQIKLGPQNVREGEEVFAVTHIYASFNDTFIHVTDMSGRETLVRVTGGMKVK 74
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIG 104
+ ++SP+AA +A D +A+ + G++++ +K+ G G +ALRAL G
Sbjct: 75 ADRDESSPYAAMLAAQDVAARCKELGITAMHIKLRATGGNGTTSPGPGAQAALRALARAG 134
Query: 105 FTIVSICDVTMIAHNGCRPRKRRR 128
I I DVT I + R + RR
Sbjct: 135 MKIGRIEDVTPIPTDSTRKPQGRR 158
>gi|1841357|dbj|BAA12798.1| mitochondrial ribosomal protein S11 [Oryza sativa Japonica Group]
gi|125586487|gb|EAZ27151.1| hypothetical protein OsJ_11086 [Oryza sativa Japonica Group]
Length = 254
Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 4 SPSRIRNRERKNIVSGR---AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNS 59
+PSRI + ++++V G+ HV+ N T +T+TD GN +S + G + S
Sbjct: 115 TPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLS 174
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSG---LGAGRDSALRALRAIGFT-------IVS 109
+AA+ + A+ G+ S+ +KV G + L +V
Sbjct: 175 KYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGFRGERVREQSPVVL 234
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCR K+RR+
Sbjct: 235 IHDVTQLPHNGCRLPKQRRV 254
>gi|156936977|ref|YP_001434773.1| 30S ribosomal protein S11P [Ignicoccus hospitalis KIN4/I]
gi|172044460|sp|A8A8W4|RS11_IGNH4 RecName: Full=30S ribosomal protein S11P
gi|156565961|gb|ABU81366.1| SSU ribosomal protein S11P [Ignicoccus hospitalis KIN4/I]
Length = 130
Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
K I G AH+ S+ NNT + ITD G T + + +V + K SP+AA +A +
Sbjct: 3 KEIRWGVAHIFSSPNNTFVHITDITGSETASRVTGGMVVKADHEKPSPYAAMIAAARAAQ 62
Query: 73 KAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A G++++ +KV G G +A+RAL GF I I DVT + H+
Sbjct: 63 QAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHD 117
>gi|170086994|ref|XP_001874720.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649920|gb|EDR14161.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 118
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H ST NNT T+T G + W S GF +++ A + + +
Sbjct: 1 LHCHSTRNNTITTLTKETGEPMIWFSGGSCGFKKGNRSTYEAGYQCAVRMFKWIEEYQRT 60
Query: 81 ----SLEVKVSGLGAGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
+++ G G GR++ AL A +VSI D T I G R +K RR+
Sbjct: 61 VPSLEIDLFFKGFGQGREALKGALLAAEGERVRQLVVSITDRTPIKIGGTRAKKTRRL 118
>gi|302682007|ref|XP_003030685.1| 40S ribosomal protein S14 [Schizophyllum commune H4-8]
gi|300104376|gb|EFI95782.1| 40S ribosomal protein S14 [Schizophyllum commune H4-8]
Length = 151
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFVHVTDLSGKETISRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKVSGLGAG--------RDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G SALRAL G I I DVT +
Sbjct: 85 CREVGITALHIKLRATGGTGTKTPGPGAQSALRALARAGMRIGRIEDVTPVP 136
>gi|170096182|ref|XP_001879311.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645679|gb|EDR09926.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 151
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI+ + + + ++SP+AA +A D + +
Sbjct: 25 ELVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDESSPYAAMLAAQDVATR 84
Query: 74 AQNHGMSSLEVKVSGLGAG--------RDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G SALRAL G I I DVT +
Sbjct: 85 CREVGVTALHIKLRATGGTGTKTPGPGAQSALRALARAGMRIGRIEDVTPVP 136
>gi|112799403|gb|ABI23027.1| 30S ribosomal protein S11 [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
gi|255513947|gb|EET90212.1| ribosomal protein S11 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 169
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 3 KSPSRIRNRERKNIV-----------------SGRAHVVSTFNNTRITITDPHG-NTIAW 44
++ S+ + +E++N+ AHV S+ N+T IT+TD G TIA
Sbjct: 14 EAESQTKKKEKENVSYEAKAMEEAKTKPKPERWAVAHVYSSKNDTIITLTDLSGSETIAV 73
Query: 45 SSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA--------GRDSA 96
S ++ + S++ SP+AA A +A+A+ G++++ +++ G G +
Sbjct: 74 GSGGMMVNADSQEGSPYAAMQAAYKVAAEAKEKGITNINIEIRAPGGHGSKTPGHGAQAV 133
Query: 97 LRALRAIGFTIVSICDVTMIA 117
+R L G + I DVT I
Sbjct: 134 VRVLARSGLRVNRIEDVTPIP 154
>gi|71028538|ref|XP_763912.1| 40S ribosomal protein S14 [Theileria parva strain Muguga]
gi|68350866|gb|EAN31629.1| 40S ribosomal protein S14, putative [Theileria parva]
Length = 151
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSP 60
+ P+ + + + V G AHV ++FN+T I ITD G T+ + + + ++SP
Sbjct: 12 AEVPTTLGPQVKGEHVFGVAHVFASFNDTFIHITDLSGRETLVRVTGGMKVKADRDESSP 71
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICD 112
+AA +A D +A+A+ G++++ VK+ G G SALR+L G I I D
Sbjct: 72 YAAMMAAQDAAARAKELGITAVHVKLRATGGTRSKTPGPGAQSALRSLARSGLKIGRIED 131
Query: 113 VTMIA 117
VT I
Sbjct: 132 VTPIP 136
>gi|169856964|ref|XP_001835135.1| 40S ribosomal protein S14 [Coprinopsis cinerea okayama7#130]
gi|116503724|gb|EAU86619.1| 40S ribosomal protein S14 [Coprinopsis cinerea okayama7#130]
Length = 151
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFVHVTDLSGRETITRVTGGMKVKADRDESSPYAAMLAAQDVAAR 84
Query: 74 AQNHGMSSLEVKVSGLGAG--------RDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G SALRAL G I I DVT +
Sbjct: 85 CREVGITALHIKLRATGGTGTKTPGPGAQSALRALARAGMRIGRIEDVTPVP 136
>gi|298253053|ref|ZP_06976845.1| ribosomal protein S11 [Gardnerella vaginalis 5-1]
gi|297532448|gb|EFH71334.1| ribosomal protein S11 [Gardnerella vaginalis 5-1]
Length = 65
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+A + + KA HG+ ++V V G G+GR++A+R+L++ G + SI DVT AHNG RP
Sbjct: 1 MAAESAARKAMEHGLKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVRPP 60
Query: 125 KRRRI 129
KRRR+
Sbjct: 61 KRRRV 65
>gi|18398140|ref|NP_564385.1| NFD3 (NUCLEAR FUSION DEFECTIVE 3); structural constituent of
ribosome [Arabidopsis thaliana]
gi|17380742|gb|AAL36201.1| putative 30S ribosomal protein S11 [Arabidopsis thaliana]
gi|21436389|gb|AAM51364.1| putative 30S ribosomal protein S11 [Arabidopsis thaliana]
gi|332193277|gb|AEE31398.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
Length = 314
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWS-SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ NNT +T+TD GN + S + G RK + + A ++ +A+ G
Sbjct: 195 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 254
Query: 79 MSSLEVKVSGL---GAGRDSALR---ALRAIGF---TIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ VKV+G G + + + IV I D T AHNGCR ++RR+
Sbjct: 255 LKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314
>gi|312212632|emb|CBX92715.1| similar to mitochondrial ribosomal protein subunit S18
[Leptosphaeria maculans]
Length = 217
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P +R ++ + H+ +T +NT IT++ P+ + + S +GF + + +
Sbjct: 80 PSEAWNLRTKDWDEDTKHKLHIYATKHNTHITLSKPNRDALISVSCGNIGFRKAGRGTYD 139
Query: 62 AAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICD 112
A ++ Q+ G + LE+ G G GR++ +A+ + I IV + D
Sbjct: 140 AGYQLAAFVMSRIQDKGLLPQIQKLELIYRGFGPGREAVTKAILGAEGKRIRPLIVKLSD 199
Query: 113 VTMIAHNGCRPRKRRRI 129
T + G R +K RR+
Sbjct: 200 STRLKFGGVRSKKPRRL 216
>gi|51873216|gb|AAU12568.1| ribosomal protein S14 [Felis catus]
Length = 120
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G H+ ++FN+T + +TD G TI + + + ++SP+AA +A D + + +
Sbjct: 17 VFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 76
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSIC 111
G+++L +K+ G G SALRAL G I I
Sbjct: 77 ELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIE 120
>gi|84996447|ref|XP_952945.1| 40S ribosomal protein S11 [Theileria annulata strain Ankara]
gi|65303942|emb|CAI76321.1| 40S ribosomal protein S11, putative [Theileria annulata]
Length = 151
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPF 61
++P+ + + + V G AHV ++FN+T I ITD G T+ + + + ++SP+
Sbjct: 13 EAPTTLGPQVKGEHVFGVAHVFASFNDTFIHITDLSGRETLVRVTGGMKVKADRDESSPY 72
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
AA +A D +A+A+ G++++ VK+ G G SALR+L G I I DV
Sbjct: 73 AAMMAAQDAAARAKELGITAVHVKLRATGGTRSKTPGPGAQSALRSLARSGLKIGRIEDV 132
Query: 114 TMIA 117
T I
Sbjct: 133 TPIP 136
>gi|300521592|gb|ADK26007.1| r-protein S11p [Candidatus Nitrososphaera gargensis]
Length = 136
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ S++NNT + ITD G TI++SS + ++SP+AA + + A+
Sbjct: 13 WGVAHIFSSYNNTLVHITDLSGSETISFSSGGRHVTADRYESSPYAAMKSAVAAAEVAKA 72
Query: 77 HGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+++L ++V G G +A+RAL GF I I DVT I H+ R
Sbjct: 73 KGINALHIRVRAVGGVGPRIPGPGAQAAIRALARAGFRIGRIDDVTPIPHDTTRKP 128
>gi|240276405|gb|EER39917.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 1456
Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 46 PPHHLHVYSHKHNTHITLTRPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 105
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRK 125
G M LEV + G G GR++ + L + I + + D T + GCR ++
Sbjct: 106 EGHLLTMKRLEVVLRGFGPGREAFTKVLLGSEGKNIRNMVCRVTDATRLKFGGCRSKR 163
>gi|325089733|gb|EGC43043.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1456
Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 46 PPHHLHVYSHKHNTHITLTRPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 105
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRK 125
G M LEV + G G GR++ + L + I + + D T + GCR ++
Sbjct: 106 EGHLLTMKRLEVVLRGFGPGREAFTKVLLGSEGKNIRNMVCRVTDATRLKFGGCRSKR 163
>gi|225030996|gb|ACN79505.1| mitochondrial ribosomal protein S11 [Nilaparvata lugens]
Length = 202
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 20 RAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
++ S+ NNT +T+TDP G S V GF + K + AAQ S+ G
Sbjct: 92 ICNIRSSRNNTIMTLTDPKTGMPKIIRSCGVEGFKNTGKGTNVAAQATALTFSSLVLGKG 151
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ ++ V V G G GR SA++ L+ G I+S+ D T ++ N
Sbjct: 152 VKTVRVVVRGTGPGRMSAIKGLQLGGLNIISVSDTTPVSFN 192
>gi|48474601|sp|Q96YV9|RS11_SULTO RecName: Full=30S ribosomal protein S11P
Length = 132
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G A V ++ NNT ITITD G I+ +S +V + K SP+AA +A +
Sbjct: 3 SRREIRWGIARVYASQNNTLITITDITGAEIISRASGGMVVKADREKPSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ +A + G+S++ +KV G G A+RAL GF I I DVT I H+
Sbjct: 63 ATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHD 119
>gi|294886265|ref|XP_002771639.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|294937182|ref|XP_002781999.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|294950767|ref|XP_002786763.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|294953619|ref|XP_002787854.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|239875345|gb|EER03455.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|239893212|gb|EER13794.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|239901117|gb|EER18559.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
gi|239902878|gb|EER19650.1| 40S ribosomal protein S14, putative [Perkinsus marinus ATCC 50983]
Length = 149
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D + +
Sbjct: 23 ELVFGVAHIYASFNDTFIHVTDVSGRETLVRVTGGMKVKADRDESSPYAAMLAAQDVAVR 82
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G +ALRAL G I I DVT I
Sbjct: 83 CKELGVNALHIKLRATGGTKTKTPGPGAQAALRALARAGMKIGRIEDVTPIP 134
>gi|296193242|ref|XP_002744442.1| PREDICTED: 40S ribosomal protein S14-like [Callithrix jacchus]
Length = 178
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSI-------CDVTMIAHNGCRPR 124
L G I I D T GC
Sbjct: 119 LARSGMKIGRIGKRHSIPSDSTRRK-GGCNQP 149
>gi|281345658|gb|EFB21242.1| hypothetical protein PANDA_006589 [Ailuropoda melanoleuca]
Length = 137
Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSI 110
L G I I
Sbjct: 119 LARSGMKIGRI 129
>gi|72390641|ref|XP_845615.1| 40S ribosomal protein S14 [Trypanosoma brucei TREU927]
gi|133789|sp|P19800|RS14_TRYBB RecName: Full=40S ribosomal protein S14
gi|162240|gb|AAA30237.1| ribosomal protein S14 [Trypanosoma brucei]
gi|62359856|gb|AAX80284.1| 40S ribosomal protein S14 [Trypanosoma brucei]
gi|70802150|gb|AAZ12056.1| 40S ribosomal protein S14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70908053|emb|CAJ17004.1| 40s ribosomal protein S14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70908063|emb|CAJ17014.1| 40s ribosomal protein S14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261329022|emb|CBH12000.1| 40S ribosomal protein S14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 144
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+ +V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 16 KDQLVYGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRDESSPYAAMMAAQDVV 75
Query: 72 AKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT +
Sbjct: 76 ARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRIEDVTPVP 129
>gi|153816225|ref|ZP_01968893.1| hypothetical protein RUMTOR_02474 [Ruminococcus torques ATCC 27756]
gi|145846408|gb|EDK23326.1| hypothetical protein RUMTOR_02474 [Ruminococcus torques ATCC 27756]
Length = 65
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 77 HGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
HG+ S++V V G G+GR++A+RAL+A G +VSI DVT + HNGCRP KRRR+
Sbjct: 13 HGLKSVDVFVKGPGSGREAAIRALQACGIDVVSIKDVTPVPHNGCRPPKRRRV 65
>gi|157093619|gb|ABV22464.1| 40S ribosomal protein S14 [Oxyrrhis marina]
Length = 150
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M R+ E + V AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MAPKKVRVEKEEEVRLGPQVREGEDVFAVAHIYASFNDTFIHVTDVSGRETMVRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG--------RDSALRALRA 102
+ ++SP+AA +A D +A+ + G++++ +K+ G SALR L
Sbjct: 61 VKADRDESSPYAAMLAAQDVAARLKELGITAIHIKLRATGGTGTKTPGPGAQSALRGLAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT
Sbjct: 121 AGLKIGRIEDVTPTP 135
>gi|225710004|gb|ACO10848.1| 28S ribosomal protein S11, mitochondrial precursor [Caligus
rogercresseyi]
Length = 194
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ NNT++ D + +SSPK+ GF + K + A + +N G+
Sbjct: 85 VHITCKKNNTKMYAYDAKDKFMFYSSPKMYGFPNASKRTEVANVTTGINMGQSLRNTGIK 144
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
+ V+V G +GR A++ L G I S+ DVT + R +KRRR+
Sbjct: 145 FIRVEVEGFNSGRTPAVKGLTQAGIQIASVSDVTRVDWGWSQRAKKRRRV 194
>gi|12321311|gb|AAG50732.1|AC079041_25 30S ribosomal protein S11, putative [Arabidopsis thaliana]
Length = 235
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWS-SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ NNT +T+TD GN + S + G RK + + A ++ +A+ G
Sbjct: 116 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 175
Query: 79 MSSLEVKVSGL---GAGRDSALR---ALRAIGF---TIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ VKV+G G + + + IV I D T AHNGCR ++RR+
Sbjct: 176 LKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 235
>gi|71400062|ref|XP_802938.1| 40S ribosomal protein S14 [Trypanosoma cruzi strain CL Brener]
gi|71415861|ref|XP_809982.1| 40S ribosomal protein S14 [Trypanosoma cruzi strain CL Brener]
gi|71664001|ref|XP_818986.1| 40S ribosomal protein S14 [Trypanosoma cruzi strain CL Brener]
gi|70865363|gb|EAN81492.1| 40S ribosomal protein S14, putative [Trypanosoma cruzi]
gi|70874447|gb|EAN88131.1| 40S ribosomal protein S14, putative [Trypanosoma cruzi]
gi|70884267|gb|EAN97135.1| 40S ribosomal protein S14, putative [Trypanosoma cruzi]
gi|322823193|gb|EFZ28998.1| 40S ribosomal protein S14, putative [Trypanosoma cruzi]
gi|322824485|gb|EFZ29881.1| 40S ribosomal protein S14, putative [Trypanosoma cruzi]
Length = 144
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+ +V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 16 KDELVYGVVHIYASFNDTFVHVTDMSGRETFCKITGGMKVKADRDESSPYAAMMAAQDVV 75
Query: 72 AKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT I
Sbjct: 76 ARCKECGINALHVKMRATGGVGTRSPGPGAQAALRALARAGMKIGRIEDVTPIP 129
>gi|154287200|ref|XP_001544395.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408036|gb|EDN03577.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 168
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 46 PPHHLHVYSHKHNTHITLTQPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 105
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G M LEV + G G GR++ + L + I + + D T + GCR ++ R
Sbjct: 106 EGHLLTMKRLEVVLRGFGPGREAFTKVLLGPEGKNIRNMVCRVTDATRLKFGGCRSKRVR 165
Query: 128 RI 129
R+
Sbjct: 166 RL 167
>gi|297697369|ref|XP_002825831.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like isoform 2
[Pongo abelii]
Length = 161
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ +++ + + +H + T I + +A +S GF ++K +
Sbjct: 37 ARQLQDAAAKQKVEVKAAPSHTKFS---TLIQVVSASNEPLALASCGTEGFRNAKKGTGV 93
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 94 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 153
Query: 122 RPRKRRRI 129
RPRK RR+
Sbjct: 154 RPRKARRL 161
>gi|328873709|gb|EGG22076.1| 40S ribosomal protein S14 [Dictyostelium fasciculatum]
Length = 246
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 1 MPKSPSRIRN-----------RERKNIVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPK 48
M K + + + + AH+ ++FN+T + ITD TI +
Sbjct: 1 MSKKEVKAPKVVELLSAKIGAKPNEEV-FAVAHIFASFNDTFVHITDLSSKETIIRITGG 59
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
++ + ++SP+AA +A +A+ + G+++L VK+ G G SALR+L
Sbjct: 60 MMVKTDRDESSPYAATMAAQAVAARCKEVGVTALHVKLRATGGTGSKTPGPGAQSALRSL 119
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 120 ARSGMKIGRIEDVTPIP 136
>gi|257076682|ref|ZP_05571043.1| 30S ribosomal protein S11P [Ferroplasma acidarmanus fer1]
Length = 127
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++ NNT I ITD G TIA S+ +V + ++SP+AA A+D + K +
Sbjct: 5 GIAHIYASQNNTIILITDQTGSETIAKSTGGMVVKNDREESSPYAAMKASDIITEKLREK 64
Query: 78 GMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
++ L ++V G G SA+R L GF I+ I +VT H+G
Sbjct: 65 EITDLIIRVRAPGGSRSRIPGPGAQSAIRTLSRAGFKILRIEEVTPTPHDGT 116
>gi|213406395|ref|XP_002173969.1| ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
gi|212002016|gb|EEB07676.1| ribosomal protein S11 [Schizosaccharomyces japonicus yFS275]
Length = 179
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + R+ + + HV + NNT +T I +S VG+ ++
Sbjct: 45 MKSKTHQTNSELREQLPY-KLHVKCSNNNTHVTFCGTDNLIIHTASGGTVGYKKVKRGEY 103
Query: 61 FAAQVATDDCSAKAQNHGMS--SLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDV 113
AA A + + + LEV SG G GR++ + L I IV + D
Sbjct: 104 DAAYAACSEVLKNIKEMELKVSRLEVIFSGFGKGREAVQKCLLGKEGFWIRDKIVRVRDA 163
Query: 114 TMIAHNGCRPRKRRRI 129
T I G R RK RR+
Sbjct: 164 TPIKFGGNRARKARRL 179
>gi|15922389|ref|NP_378058.1| 30S ribosomal protein S11P [Sulfolobus tokodaii str. 7]
gi|15623178|dbj|BAB67167.1| 135aa long hypothetical 30S ribosomal protein S11 [Sulfolobus
tokodaii str. 7]
Length = 135
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G A V ++ NNT ITITD G I+ +S +V + K SP+AA +A +
Sbjct: 6 SRREIRWGIARVYASQNNTLITITDITGAEIISRASGGMVVKADREKPSPYAAMLAANKA 65
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ +A + G+S++ +KV G G A+RAL GF I I DVT I H+
Sbjct: 66 ATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHD 122
>gi|225709206|gb|ACO10449.1| 28S ribosomal protein S11, mitochondrial precursor [Caligus
rogercresseyi]
Length = 194
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ NNT++ D + +SSPK+ GF + K + A + +N G+
Sbjct: 85 VHITCKKNNTKMYAYDAKDKFMFYSSPKMYGFLNASKRTEVANVTTGINMGQSLRNTGIK 144
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
+ V+V G +GR A++ L G I S+ DVT + R +KRRR+
Sbjct: 145 FIRVEVEGFNSGRTPAVKGLTQAGIQIASVSDVTRVDWGWSQRAKKRRRV 194
>gi|269986617|gb|EEZ92899.1| ribosomal protein S11 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 129
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ +T NNT I +TD T + S + +SP AA A + +
Sbjct: 7 GIAHIYATMNNTIIHVTDLSNAYTFSIKSGGSQVKADRLGSSPRAAMDAAKKVAEEITAK 66
Query: 78 GMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
G+ + VKV G G A++AL G I++I +VT + H+GC
Sbjct: 67 GIRDVYVKVRAVGGIGSKTTGPGARPAIKALERSGVNILNIENVTPVPHDGC 118
>gi|270056483|gb|ACZ59467.1| ribosomal protein S11 [Flammulina velutipes]
Length = 230
Score = 93.3 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA-- 74
R + S+ NNT IT TD G IAWSS GF G+R +P AA A+ +
Sbjct: 104 PHYRIYCKSSNNNTIITFTDDKGMPIAWSSAGRCGFKGTRGATPEAAYAASVAIIQEVPK 163
Query: 75 -------QNHGMSSLEVKVSGLGAGRDSALRALRA-IGFTIVS----ICDVTMIAHNGCR 122
+ M L+V ++G G GR + ++ L + G I S I D T I G R
Sbjct: 164 RKNGSGKKEGEMFLLDVYLTGFGIGRGTLIQTLASPEGEEINSLLSIIRDNTPIKVGGVR 223
Query: 123 PRKRRRI 129
+K RRI
Sbjct: 224 AKKARRI 230
>gi|85117800|ref|XP_965330.1| hypothetical protein NCU03230 [Neurospora crassa OR74A]
gi|28927137|gb|EAA36094.1| predicted protein [Neurospora crassa OR74A]
Length = 376
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV----ATDDCSAKAQNH 77
H+ S +NT IT+T P+ + + S +GF S + +A D ++
Sbjct: 259 HIYSHKHNTHITVTKPNRDALISLSCGNLGFKKSNRKHYDSAYQLGAYVVDKMHQMNLHN 318
Query: 78 GMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +EV + G G GR++ ++ L R + +IV + D T + G R +K RR+
Sbjct: 319 KIKKMEVVLRGFGPGREAVIKVLLGNEGRMLRSSIVRVSDATRLKFGGTRSKKPRRL 375
>gi|123487441|ref|XP_001324949.1| ribosomal protein S14 [Trichomonas vaginalis G3]
gi|42491229|dbj|BAD10931.1| ribosomal protein S14 [Trichomonas vaginalis]
gi|121907840|gb|EAY12726.1| ribosomal protein S14 [Trichomonas vaginalis G3]
Length = 159
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ IV G AH+ ++ N+T + +TD G T+A + + + + +P+AA +A
Sbjct: 29 KRDGEIVMGVAHIYASKNDTFVHVTDLSGSETLARCTGGIAVRAQRDEATPYAAMLAAQA 88
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+ + G+ + +K G G SALRAL G I I DVT + H+
Sbjct: 89 VAARLKELGVDGVHIKFRGEGGSSRRLPAQGAQSALRALARAGVKIGRIEDVTPLPHD 146
>gi|288560164|ref|YP_003423650.1| ribosomal protein S11P Rps11p [Methanobrevibacter ruminantium M1]
gi|288542874|gb|ADC46758.1| ribosomal protein S11P Rps11p [Methanobrevibacter ruminantium M1]
Length = 130
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
K+ G A++ S+FNNT +T+TD G TI S V + +++SPFAA A + +
Sbjct: 3 KDEKWGIANIYSSFNNTILTVTDITGAETICQWSGGRVVRADRQQSSPFAAMEAANRAAE 62
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
A+ G L ++V G G + +RAL G I I D+T I H+
Sbjct: 63 DAKEKGFVGLHIRVRAPGGNGPRSPGPGAQATIRALARAGIKIGKIEDITPIPHD 117
>gi|123455508|ref|XP_001315498.1| ribosomal protein S14 [Trichomonas vaginalis G3]
gi|121898176|gb|EAY03275.1| ribosomal protein S14, putative [Trichomonas vaginalis G3]
Length = 161
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ IV G AH+ ++ N+T + +TD G T+A + + + + +P+AA +A
Sbjct: 31 KRDGEIVMGVAHIYASKNDTFVHVTDLSGSETLARCTGGIAVRAQRDEATPYAAMLAAQA 90
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+ + G+ + +K G G SALRAL G I I DVT + H+
Sbjct: 91 VAARLKELGVDGVHIKFRGEGGSSRRLPAQGAQSALRALARAGVKIGRIEDVTPLPHD 148
>gi|261194713|ref|XP_002623761.1| 37S ribosomal protein S11 [Ajellomyces dermatitidis SLH14081]
gi|239588299|gb|EEQ70942.1| 37S ribosomal protein S11 [Ajellomyces dermatitidis SLH14081]
gi|239613423|gb|EEQ90410.1| 37S ribosomal protein S11 [Ajellomyces dermatitidis ER-3]
gi|327351926|gb|EGE80783.1| 37S ribosomal protein S11 [Ajellomyces dermatitidis ATCC 18188]
Length = 211
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 89 PPHHLHVYSHKHNTHITLTRPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 148
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G M LEV + G G GR++ + L + I + + D T + GCR ++ R
Sbjct: 149 EGHLLTMKRLEVVLRGFGPGREAFTKVLLGSEGKNIRNMVCRVTDATRVKFGGCRSKRVR 208
Query: 128 RI 129
R+
Sbjct: 209 RL 210
>gi|123489921|ref|XP_001325501.1| ribosomal protein S14 [Trichomonas vaginalis G3]
gi|121908401|gb|EAY13278.1| ribosomal protein S14, putative [Trichomonas vaginalis G3]
Length = 162
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ IV G AH+ ++ N+T + +TD G T+A + + + + +P+AA +A
Sbjct: 32 KRDGEIVMGVAHIYASKNDTFVHVTDLSGSETLARCTGGIAVRAQRDEATPYAAMLAAQA 91
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+ + G+ + +K G G SALRAL G I I DVT + H+
Sbjct: 92 VAARLKELGVDGVHIKFRGEGGSSRRLPAQGAQSALRALARAGVKIGRIEDVTPLPHD 149
>gi|169607709|ref|XP_001797274.1| hypothetical protein SNOG_06913 [Phaeosphaeria nodorum SN15]
gi|111064444|gb|EAT85564.1| hypothetical protein SNOG_06913 [Phaeosphaeria nodorum SN15]
Length = 219
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+ H+ ST +NT IT++ P+ + + S +GF + + + A ++ Q+
Sbjct: 98 KHKLHIYSTKHNTHITLSKPNRDALISVSCGNIGFRKAGRGTYDAGYQLAAFVMSRIQDK 157
Query: 78 G----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G + LE+ G G GR++ +A+ R I IV + D T + G R +K RR
Sbjct: 158 GLLPQIKKLELVYRGFGQGREAVTKAILGSEGRKIRNLIVKLSDSTRLKFGGVRSKKPRR 217
Query: 129 I 129
+
Sbjct: 218 L 218
>gi|147834319|emb|CAN63246.1| hypothetical protein VITISV_018830 [Vitis vinifera]
Length = 224
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 92 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCK 151
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSI 110
G+++L +K+ G G SALRAL G I I
Sbjct: 152 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRI 194
>gi|123472295|ref|XP_001319342.1| ribosomal protein S14 [Trichomonas vaginalis G3]
gi|121902123|gb|EAY07119.1| ribosomal protein S14, putative [Trichomonas vaginalis G3]
Length = 160
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ IV G AH+ ++ N+T + +TD G T+A + + + + +P+AA +A
Sbjct: 30 KRDGEIVMGVAHIYASKNDTFVHVTDLSGSETLARCTGGIAVRAQRDEATPYAAMLAAQA 89
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+ + G+ + +K G G SALRAL G I I DVT + H+
Sbjct: 90 VAARLKELGVDGVHIKFRGEGGSSRRLPAQGAQSALRALARAGVKIGRIEDVTPLPHD 147
>gi|123410181|ref|XP_001303635.1| 40S ribosomal protein S14 [Trichomonas vaginalis G3]
gi|121885029|gb|EAX90705.1| 40S ribosomal protein S14, putative [Trichomonas vaginalis G3]
Length = 161
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ IV G AH+ ++ N+T + +TD G T+A + + + + +P+AA +A
Sbjct: 31 KRDGEIVMGVAHIYASKNDTFVHVTDLSGSETLARCTGGIAVRAQRDEATPYAAMLAAQA 90
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+ + G+ + +K G G SALRAL G I I DVT + H+
Sbjct: 91 VAARLKELGVDGVHIKFRGEGGSSRRLPAQGAQSALRALARAGVKIGRIEDVTPLPHD 148
>gi|11497467|ref|NP_042257.1| ribosomal protein S11 [Prototheca wickerhamii]
gi|1173312|sp|P46746|RT11_PROWI RecName: Full=Ribosomal protein S11, mitochondrial
gi|467858|gb|AAD12645.1| ribosomal protein S11 [Prototheca wickerhamii]
Length = 128
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 1 MPKSPSRIRNR--ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M S+I + E+K SG H+ ST NNT IT+TD GNT + S +GF SRK+
Sbjct: 1 MLVKKSQISRKFIEKK---SGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSRKS 57
Query: 59 SPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH 118
+ +A+ A + ++KA N G ++ VK+ GLG G+ SA+R L+ I I +VT IAH
Sbjct: 58 TVYASGAAAEALASKAFNEGYRTIIVKIKGLGYGKKSAIRGLQKSNLVIKQIQEVTPIAH 117
Query: 119 NGCRPRKRRRI 129
NGCRP K+RR+
Sbjct: 118 NGCRPPKKRRV 128
>gi|148643487|ref|YP_001274000.1| 30S ribosomal protein S11P [Methanobrevibacter smithii ATCC 35061]
gi|222445014|ref|ZP_03607529.1| hypothetical protein METSMIALI_00630 [Methanobrevibacter smithii
DSM 2375]
gi|261350416|ref|ZP_05975833.1| ribosomal protein S11 [Methanobrevibacter smithii DSM 2374]
gi|172048098|sp|A5UN54|RS11_METS3 RecName: Full=30S ribosomal protein S11P
gi|148552504|gb|ABQ87632.1| ribosomal protein S11p [Methanobrevibacter smithii ATCC 35061]
gi|222434579|gb|EEE41744.1| hypothetical protein METSMIALI_00630 [Methanobrevibacter smithii
DSM 2375]
gi|288861199|gb|EFC93497.1| ribosomal protein S11 [Methanobrevibacter smithii DSM 2374]
Length = 130
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
K+ G A++ S++NNT IT+TD G TI+ S V + ++ SPFAA A +
Sbjct: 3 KDEKWGIANIYSSYNNTIITVTDITGAETISQWSGGKVVRADRQQASPFAAMAAATRIAD 62
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
A+ G L ++V G G + +RAL G I I D+T I H+
Sbjct: 63 DAKEKGFVGLHIRVRAPGGNGHRSPGPGAQATIRALARAGIKIGKIEDITPIPHD 117
>gi|328859211|gb|EGG08321.1| hypothetical protein MELLADRAFT_71507 [Melampsora larici-populina
98AG31]
Length = 152
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G T++ + + + ++SP+AA +A D +A+
Sbjct: 26 ELVFGVAHIFASFNDTFVHVTDLSGRETVSRVTGGMKVKADRDESSPYAAMLAAQDVAAR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G +ALRAL G I I DVT +
Sbjct: 86 CKEVGITALHIKLRATGGTHTKTPGPGGQAALRALARAGMRIGRIEDVTPVP 137
>gi|255555499|ref|XP_002518786.1| Mitochondrial ribosomal protein S11, putative [Ricinus communis]
gi|223542167|gb|EEF43711.1| Mitochondrial ribosomal protein S11, putative [Ricinus communis]
Length = 226
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
+ NNT I + D GNT ++ G K + +AA+ A + +A+ G+
Sbjct: 108 IVLINLKRNNTFINVLDSKGNTKFKATSGAKAVGGGGKVTRYAAEAAAEFVGRRAREMGL 167
Query: 80 SSLEVKVSGLG--AGRDSALRAL-------RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S+ ++V G + A+ + R+ IV I DVT HNGCR K+RRI
Sbjct: 168 KSVVMRVKGFTYFKKKRQAIMSFREGFSNSRSDQNPIVYIEDVTQRPHNGCRLPKKRRI 226
>gi|316964793|gb|EFV49739.1| 40S ribosomal protein S14 [Trichinella spiralis]
gi|316974576|gb|EFV58061.1| 40S ribosomal protein S14 [Trichinella spiralis]
Length = 151
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D + + +
Sbjct: 29 GVAHIFASFNDTFVHITDLSGRETICRVTGGMKVKADRDEASPYAAMLAAQDAAERCKAL 88
Query: 78 GMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 89 GITALHIKLRATGGTKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 136
>gi|331216261|ref|XP_003320810.1| 40S ribosomal protein S11 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299800|gb|EFP76391.1| 40S ribosomal protein S11 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 152
Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G T++ + + + ++SP+AA +A D +A+
Sbjct: 26 ELVFGVAHIFASFNDTFVHVTDLSGRETVSRVTGGMKVKADRDESSPYAAMLAAQDVAAR 85
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G +ALRAL G I I DVT +
Sbjct: 86 CKEVGITALHIKLRATGGTHTKTPGPGGQAALRALARAGMRIGRIEDVTPVP 137
>gi|303388653|ref|XP_003072560.1| 40S ribosomal protein S14 [Encephalitozoon intestinalis ATCC 50506]
gi|303301701|gb|ADM11200.1| 40S ribosomal protein S14 [Encephalitozoon intestinalis ATCC 50506]
Length = 136
Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 20 RAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
AH+ +T N+T + ITD G TIA + + + + SP+AA +A D + K G
Sbjct: 15 VAHIKATKNDTFVHITDMTGSETIAKITGGMRVKAQRDEGSPYAAMLAAQDVAEKILGRG 74
Query: 79 MSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMI 116
+ L K+ G LG G +A+R L G + I DVT +
Sbjct: 75 VKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLKVGRIEDVTPV 120
>gi|225559725|gb|EEH08007.1| mitochondrial ribosomal protein subunit S18 [Ajellomyces capsulatus
G186AR]
Length = 168
Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 46 PPHHLHVYSHKHNTHITLTRPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 105
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G M LEV + G G GR++ + L + I + + D T + GCR ++ R
Sbjct: 106 EGHLLTMKRLEVVLRGFGPGREAFTKVLLGSEGKNIRNMVCRVTDATRLKFGGCRSKRVR 165
Query: 128 RI 129
R+
Sbjct: 166 RL 167
>gi|225433654|ref|XP_002265167.1| PREDICTED: similar to 30S ribosomal protein S11, putative [Vitis
vinifera]
Length = 198
Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHG 78
H+ NN +T+TD GN +S + G K S +AA + A+N G
Sbjct: 79 IVHIKLIRNNAFVTVTDSKGNKKIGASSGCLSEMKGGPKLSRYAADATAEHVGRLARNLG 138
Query: 79 MSSLEVKVSGLG--AGRDSALRALR-------AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ +KV G + A+ + + I+ I D T HNGCR ++RR+
Sbjct: 139 LKSVVMKVKGFTYFKKKKQAIMSWKEGFNSSRGDENPIMYIEDTTRRPHNGCRLPRKRRV 198
>gi|146094216|ref|XP_001467219.1| 40S ribosomal protein S14 [Leishmania infantum JPCM5]
gi|134071583|emb|CAM70272.1| 40S ribosomal protein S14 [Leishmania infantum JPCM5]
gi|322501307|emb|CBZ36386.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 144
Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ ++V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 15 KKGDLVYGVVHIYASFNDTFVHVTDTSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDV 74
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT I
Sbjct: 75 VARCKECGINALHVKMRAVGGVRTKSPGPGAQAALRALARAGMKIGRIEDVTPIP 129
>gi|829328|emb|CAA30669.1| rps11 protein (1 is 2nd base in codon) [Zea mays]
Length = 81
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVS 109
GF SRK SP+A Q D G+ EV V G G+GRD+ALRA+ G +
Sbjct: 5 CGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRLSC 61
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCRP K+RR+
Sbjct: 62 IRDVTPMPHNGCRPPKKRRL 81
>gi|149690757|ref|XP_001503234.1| PREDICTED: similar to mitochondrial ribosomal protein S11 isoform 2
[Equus caballus]
Length = 162
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + +A +S GF ++K + AAQ A +AKA G++ + V V GL
Sbjct: 63 TQIQVMSAANQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKAAGKGVTHIRVVVKGL 122
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA++ L G ++SI D T I HNGCRPRK RR+
Sbjct: 123 GPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL 162
>gi|330827905|ref|YP_004390857.1| 30S ribosomal protein S11 [Aeromonas veronii B565]
gi|328803041|gb|AEB48240.1| 30S ribosomal protein S11 [Aeromonas veronii B565]
Length = 57
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
A+ +G+ +LEV V G G GR+S++RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 1 MAKEYGVKNLEVMVKGPGPGRESSIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 57
>gi|290561851|gb|ADD38323.1| 28S ribosomal protein S11, mitochondrial [Lepeophtheirus salmonis]
Length = 193
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ NNT+I+ D + +SSPK+ GF + K + A + +N G+
Sbjct: 84 VHLTCKKNNTKISAYDSKNKFLFYSSPKMYGFLNASKRTEVANVTTGINMGQSLRNVGIK 143
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
+ V++ G GR +A++ + G I S+ DVT + R +KRRR+
Sbjct: 144 YVRVEIDGFNIGRLAAVKGIAQTGIQIASVSDVTHVDWGWSKRAKKRRRV 193
>gi|325958564|ref|YP_004290030.1| 30S ribosomal protein S11P [Methanobacterium sp. AL-21]
gi|325329996|gb|ADZ09058.1| ribosomal protein S11P [Methanobacterium sp. AL-21]
Length = 130
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ G A+V S+FNNT IT+TD G TI S V + +++SPFAA A +
Sbjct: 3 EKEKWGVANVYSSFNNTIITVTDITGAETITQWSGGKVVRADRQESSPFAAMEAATRAAE 62
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ G+ L +KV G G + +RAL G I I DVT I H+
Sbjct: 63 DVKEKGIIGLHIKVRAPGGNGPRTPGPGAQATIRALARAGIRIGKIEDVTPIPHD 117
>gi|290462169|gb|ADD24132.1| 28S ribosomal protein S11, mitochondrial [Lepeophtheirus salmonis]
Length = 193
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ NNT+I+ D + +SSPK+ GF + K + A + +N G+
Sbjct: 84 VHLTCKKNNTKISAYDSKNKFLFYSSPKMYGFLNASKRTEVANVTTGINMGQSLRNVGIK 143
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
+ V++ G GR +A++ + G I S+ DVT + R +KRRR+
Sbjct: 144 YVRVEIDGFNIGRLAAVKGIAQTGIQIASVSDVTHVDWGWSKRAKKRRRV 193
>gi|159042206|ref|YP_001541458.1| 30S ribosomal protein S11P [Caldivirga maquilingensis IC-167]
gi|189040405|sp|A8M9Z7|RS11_CALMQ RecName: Full=30S ribosomal protein S11P
gi|157921041|gb|ABW02468.1| ribosomal protein S11 [Caldivirga maquilingensis IC-167]
Length = 132
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G A++ ++ NNT I ITD G T+A S V + K SP+AA +A +
Sbjct: 5 RKLRWGIAYIYASSNNTMIIITDLTGSETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQ 64
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
A G++++ VKV G G G +A+RAL G I I DVT I H+
Sbjct: 65 IAMARGINAVHVKVRGPGGYGLKVPGPGAVAAIRALARAGMIIGRIEDVTPIPHD 119
>gi|224059234|ref|XP_002299781.1| predicted protein [Populus trichocarpa]
gi|222847039|gb|EEE84586.1| predicted protein [Populus trichocarpa]
Length = 170
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M K +R E + V G AH+ ++FN+T I +TD G T+ + +
Sbjct: 1 MSKRRTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRA 102
+ ++SP+AA +A D S + + G+++L +K+ G G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSI 110
G I I
Sbjct: 121 SGMKIGRI 128
>gi|145239277|ref|XP_001392285.1| 37S ribosomal protein S11 [Aspergillus niger CBS 513.88]
gi|134076791|emb|CAK39846.1| unnamed protein product [Aspergillus niger]
Length = 235
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV +NT +T+T P+G+ + S +GF S+++ AA + Q G
Sbjct: 117 LHVYCHKHNTILTLTRPNGDPMLAKSCGHLGFRKSKRSGYEAAHQLASHVFGQIQERGFL 176
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LE+ G GR++ + L + I + + D T + G R + RR+
Sbjct: 177 LEIKRLEIIFRDFGQGREAFTKVLLGNEGKNIRGLVCRVTDSTRLKFGGSRSPRVRRL 234
>gi|226290220|gb|EEH45704.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 221
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T +G + S +GF ++++ AA K Q
Sbjct: 99 PPHHLHVYSHKHNTHITLTRSNGEPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 158
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G M LEV + G G GR++ + L + I + + D + + GCR + R
Sbjct: 159 EGHLLKMKRLEVVLRGFGPGREAFTKVLLGPEGKNIRNLVCRVTDASRLKFGGCRSKNVR 218
Query: 128 RI 129
R+
Sbjct: 219 RL 220
>gi|41614865|ref|NP_963363.1| 30S ribosomal protein S11P [Nanoarchaeum equitans Kin4-M]
gi|74579987|sp|Q74N73|RS11_NANEQ RecName: Full=30S ribosomal protein S11P
gi|40068589|gb|AAR38924.1| NEQ069 [Nanoarchaeum equitans Kin4-M]
Length = 130
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
G AH+ S+ NNT I ITD G TIA S +V + + SP AA +A +A A+
Sbjct: 6 WGVAHIYSSENNTIIHITDITGAETIAVGSGGMVVNADRLEGSPTAAILAAKRAAALAKE 65
Query: 77 HGMSSLEVKVSGLG---------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
G++ L +KV G G +A++ L G I I DVT H+GC
Sbjct: 66 RGITGLHIKVRAPGGHNGPWIPGPGASAAIKTLAREGLKIGIIEDVTPTPHDGC 119
>gi|2350992|dbj|BAA22022.1| ribosomal protein S14 [Entamoeba histolytica]
Length = 140
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G AH+ +TFN+T + +TD G TI + + + ++SP+AA A D + + +
Sbjct: 19 AFGVAHIYATFNDTFVHVTDISGKETIIRITGGMRVKADRDESSPYAAMTAAQDVAKRCK 78
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ G++SL +K+ G G G +ALRAL I I DVT I + KRR
Sbjct: 79 DLGVTSLHIKMRGEGGVYSKTPGTGAQAALRALARANMKIGRIEDVTPIPTDWT---KRR 135
>gi|58268170|ref|XP_571241.1| structural constituent of ribosome [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113392|ref|XP_774721.1| hypothetical protein CNBF4000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321260354|ref|XP_003194897.1| 40S ribosomal protein S14 [Cryptococcus gattii WM276]
gi|50257365|gb|EAL20074.1| hypothetical protein CNBF4000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227476|gb|AAW43934.1| structural constituent of ribosome, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|317461369|gb|ADV23110.1| 40S ribosomal protein S14, putative [Cryptococcus gattii WM276]
Length = 150
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TI+ + + + ++SP+AA +A D +AK +
Sbjct: 26 VFGVAHIFASFNDTFVHVTDLTGKETISRVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 85
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L VK+ G G +ALRAL G I I DVT
Sbjct: 86 EVGITALHVKLRATGGTGTKQPGPGGQAALRALARAGMRIGRIEDVTPTP 135
>gi|154340355|ref|XP_001566134.1| 40S ribosomal protein S14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|154342067|ref|XP_001566985.1| 40S ribosomal protein S14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063453|emb|CAM39633.1| 40S ribosomal protein S14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064310|emb|CAM40511.1| 40S ribosomal protein S14 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 144
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ +V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 15 KKGELVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDV 74
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT I
Sbjct: 75 VARCKECGINALHVKMRAVGGVRTKSPGPGAQAALRALARAGMKIGRIEDVTPIP 129
>gi|110225717|ref|YP_665722.1| ribosomal protein S11 [Mesostigma viride]
gi|17222588|gb|AAL36761.1|AF353999_41 ribosomal protein S11 [Mesostigma viride]
Length = 128
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
K+ N+ + G HV +T NNT +T+TD GNTI S ++GF GSRK + FA
Sbjct: 2 KTTGNRSNKTAVALPIGILHVQTTLNNTIMTLTDRKGNTIFGFSSGMLGFGGSRKKTRFA 61
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFT--IVSICDVTMIAHNG 120
++ + + + L + + G + L +L G IV I D T HNG
Sbjct: 62 SRSVAQHMVLRCKQLRIQRLILAIK--GRMNLNFLTSLIKKGRKISIVQIIDKTPKVHNG 119
Query: 121 CRPRKRRR 128
CRP K R
Sbjct: 120 CRPPKMPR 127
>gi|146091837|ref|XP_001470135.1| 40S ribosomal protein S14 [Leishmania infantum]
gi|134084929|emb|CAM69327.1| 40S ribosomal protein S14 [Leishmania infantum JPCM5]
gi|322500433|emb|CBZ35510.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 144
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 1 MPKS---PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSR 56
M K + N ++ ++V G H+ ++FN+T + +TD G T + + +
Sbjct: 1 MSKKQEVKTYGPNVKKGDLVYGVVHIFASFNDTFVHVTDTSGRETYVKVTGGMKVKADRD 60
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIV 108
++SP+AA +A D A+ + G+++L VK+ G G +ALRAL G I
Sbjct: 61 ESSPYAAMMAAQDVVARCKECGINALHVKMRAVGGVRTKSPGPGAQAALRALARAGMKIG 120
Query: 109 SICDVTMIA 117
I DVT I
Sbjct: 121 RIEDVTPIP 129
>gi|322493178|emb|CBZ28463.1| 40S ribosomal protein S14 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493749|emb|CBZ29039.1| 40S ribosomal protein S14 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 144
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ ++V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 15 KKGDLVYGVVHIFASFNDTFVHVTDTSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDV 74
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT I
Sbjct: 75 VARCKECGINALHVKMRAVGGVRTKSPGPGAQAALRALARAGMKIGRIEDVTPIP 129
>gi|157871656|ref|XP_001684377.1| 40S ribosomal protein S14 [Leishmania major]
gi|68127446|emb|CAJ05231.1| 40S ribosomal protein S14 [Leishmania major strain Friedlin]
Length = 144
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ ++V G H+ ++FN+T + +TD G T + + + ++SP+AA +A D
Sbjct: 15 KKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDESSPYAAMMAAQDV 74
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
A+ + G+++L VK+ G G +ALRAL G I I DVT I
Sbjct: 75 VARCKECGINALHVKMRAVGGVRTKSPGPGAQAALRALARAGMKIGRIEDVTPIP 129
>gi|119719175|ref|YP_919670.1| 30S ribosomal protein S11P [Thermofilum pendens Hrk 5]
gi|152060829|sp|A1RWT7|RS11_THEPD RecName: Full=30S ribosomal protein S11P
gi|119524295|gb|ABL77667.1| SSU ribosomal protein S11P [Thermofilum pendens Hrk 5]
Length = 156
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSP 60
+ R ++ + V G A + +++NNT I ITD G TIA++S +V + K SP
Sbjct: 18 AEERRETREKQVRGDV-GIAWIYASYNNTIIHITDLSGAETIAFASGGMVAKADRDKPSP 76
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICD 112
+AA A + A + G+ + VK+ G G A+RAL G + I D
Sbjct: 77 WAAMQAAARAAKIALDKGIRVVHVKIKAPGGYGPKTPGPGAGPAIRALVRAGLMVDRIED 136
Query: 113 VTMIAHNGCRPR 124
VT + + R
Sbjct: 137 VTPLPTDSIRKP 148
>gi|118150778|ref|NP_001071298.1| ribosomal protein S14 [Bos taurus]
gi|74268249|gb|AAI02537.1| Ribosomal protein S14 [Bos taurus]
gi|296485154|gb|DAA27269.1| ribosomal protein S14 [Bos taurus]
Length = 157
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRA 99
+ + ++SP+AA +A D + + + G+++L +K+ G G SALRA
Sbjct: 59 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 118
Query: 100 LRAIGFTIVSI 110
L G I I
Sbjct: 119 LARSGMKIGRI 129
>gi|67475755|ref|XP_653549.1| 40S ribosomal protein S14 [Entamoeba histolytica HM-1:IMSS]
gi|183230114|ref|XP_001913399.1| ribosomal protein S14 [Entamoeba histolytica HM-1:IMSS]
gi|56470526|gb|EAL48173.1| 40S ribosomal protein S14, putative [Entamoeba histolytica
HM-1:IMSS]
gi|169803056|gb|EDS89824.1| ribosomal protein S14, putative [Entamoeba histolytica HM-1:IMSS]
Length = 146
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G AH+ +TFN+T + +TD G TI + + + ++SP+AA A D + + +
Sbjct: 22 AFGVAHIYATFNDTFVHVTDISGKETIIRITGGMRVKADRDESSPYAAMTAAQDVAKRCK 81
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G++SL +K+ G G G +ALRAL I I DVT I
Sbjct: 82 DLGVTSLHIKMRGEGGVYSKTPGPGAQAALRALARANMKIGRIEDVTPIP 131
>gi|307697301|gb|ADN86105.1| ribosomal protein S11 [Chasmanthium latifolium]
Length = 79
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTI 107
GF SRK SP+A Q D G+ EV V G G+GRD+ALRA+ G +
Sbjct: 1 GTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALRAIAKSGVRL 57
Query: 108 VSICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCRP K+RR+
Sbjct: 58 SCIRDVTPMPHNGCRPPKKRRL 79
>gi|171694972|ref|XP_001912410.1| hypothetical protein [Podospora anserina S mat+]
gi|170947728|emb|CAP59891.1| unnamed protein product [Podospora anserina S mat+]
Length = 218
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS- 80
H+ S +NT +T+T P+ + + S +GF + + +A K G++
Sbjct: 101 HIYSHKHNTHVTLTKPNRDALISLSCGNLGFKHAGRKHYDSAYQLGAYVIDKMNQKGLTK 160
Query: 81 ---SLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
LEV + G G+GR++ ++ L + + IV + D T I G R +K RR+
Sbjct: 161 KIHKLEVILRGFGSGREAVVKVLMGNEGKGLRDKIVKVSDSTRIKFGGTRSKKPRRL 217
>gi|167393430|ref|XP_001740570.1| 40S ribosomal protein S14 [Entamoeba dispar SAW760]
gi|165895262|gb|EDR22994.1| 40S ribosomal protein S14, putative [Entamoeba dispar SAW760]
Length = 146
Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
G AH+ +TFN+T + +TD G TI + + + ++SP+AA A D + + +
Sbjct: 22 AFGVAHIYATFNDTFVHVTDISGKETIIRITGGMRVKADRDESSPYAAMTAAQDVAKRCK 81
Query: 76 NHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G++SL +K+ G G G +ALRAL I I DVT I
Sbjct: 82 DLGVTSLHIKMRGEGGVYSKTPGPGAQAALRALARANMKIGRIEDVTPIP 131
>gi|303324401|ref|XP_003072188.1| hypothetical protein CPC735_013610 [Coccidioides posadasii C735
delta SOWgp]
gi|240111898|gb|EER30043.1| hypothetical protein CPC735_013610 [Coccidioides posadasii C735
delta SOWgp]
gi|320037224|gb|EFW19162.1| 37S ribosomal protein S11 [Coccidioides posadasii str. Silveira]
Length = 213
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV + +NT +T+T P+ + + S +GF S + A AK Q G
Sbjct: 95 LHVYAHKHNTHLTLTRPNRDPMMSISCGTIGFRKSHRGGYDPAHQLCSYMMAKIQERGFL 154
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LEV + G G GR++ + L + I +V + D T + G R + RR+
Sbjct: 155 MDIRQLEVVLRGFGPGREAFTKVLLGPEGKKIREKVVRVTDATRLKFGGTRSPRVRRL 212
>gi|146454918|gb|ABQ42125.1| 40S ribosomal protein S14 [Sonneratia caseolaris]
gi|146454920|gb|ABQ42126.1| 40S ribosomal protein S14 [Sonneratia ovata]
gi|146454922|gb|ABQ42127.1| 40S ribosomal protein S14 [Sonneratia apetala]
Length = 116
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D S + +
Sbjct: 14 VFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCK 73
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSI 110
G+++L +K+ G G SALRAL G I I
Sbjct: 74 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 116
>gi|209881329|ref|XP_002142103.1| 40s ribosomal protein S14 [Cryptosporidium muris RN66]
gi|209557709|gb|EEA07754.1| 40s ribosomal protein S14, putative [Cryptosporidium muris RN66]
Length = 148
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
AH+ ++FN+T I +TD G TI + + + ++SP+AA +A D + K + G
Sbjct: 27 VAHIYASFNDTFIHVTDLSGRETIVRVTGGMKVKADRDESSPYAAMMAAVDVAQKCKEFG 86
Query: 79 MSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +L +K+ +G G SALRAL G I I DVT I
Sbjct: 87 IHALHIKLRSVGGVKSKSMGPGAQSALRALARAGMKIGRIEDVTPIP 133
>gi|330932136|ref|XP_003303663.1| hypothetical protein PTT_15974 [Pyrenophora teres f. teres 0-1]
gi|311320192|gb|EFQ88246.1| hypothetical protein PTT_15974 [Pyrenophora teres f. teres 0-1]
Length = 217
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
RE + + HV +T +NT + +T P+ + + S +GF + + + AA
Sbjct: 88 RREWEEDDKHKLHVYATKHNTHLCLTKPNRDPLISVSCGNIGFRKAGRGTYDAAYQLAAF 147
Query: 70 CSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNG 120
++ Q+ G + LE+ G G+GR++ +A+ + + IV + D T + G
Sbjct: 148 LMSRIQDKGLLPQIQKLELTYRGFGSGREAVTKAILGAEGKKVRPLIVKLSDSTRLKFGG 207
Query: 121 CRPRKRRRI 129
R +K RR+
Sbjct: 208 TRSKKPRRL 216
>gi|119173703|ref|XP_001239256.1| hypothetical protein CIMG_10278 [Coccidioides immitis RS]
Length = 213
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV + +NT +T+T P+ + + S +GF S + A AK Q G
Sbjct: 95 LHVYAHKHNTHLTLTRPNRDPMMSISCGTIGFRKSHRGGYDPAHQLCSYMMAKIQERGFL 154
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LEV + G G GR++ + L + I +V + D T + G R + RR+
Sbjct: 155 MDIRQLEVVLRGFGPGREAFTKVLLGPEGKKIREKVVRVTDATRLKFGGTRSPRVRRL 212
>gi|70995175|ref|XP_752352.1| 37S ribosomal protein S11 [Aspergillus fumigatus Af293]
gi|66849987|gb|EAL90314.1| 37S ribosomal protein S11, putative [Aspergillus fumigatus Af293]
Length = 198
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV + +NT +T+T P+GN + S +GF ++ A T + Q
Sbjct: 76 PPHHLHVYAHKHNTLLTLTQPNGNPMLSMSCGHLGFRKGGRSGYDPAYQLTSHVFGQIQE 135
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G + LE+ G G GR++ + L + I + + D T I G R RK R
Sbjct: 136 RGFLMDIKRLEIVFQGFGQGREAFTKVLLGSEGKNIRGLVSRVTDSTRIKFGGTRSRKVR 195
Query: 128 RI 129
R+
Sbjct: 196 RL 197
>gi|166895625|ref|YP_001661419.1| ribosomal protein S11 [Cycas taitungensis]
gi|166706957|dbj|BAF98421.1| ribosomal protein S11 [Cycas taitungensis]
Length = 193
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG--FSGSRKNSP 60
R R + + + S H NNT +T+TD GN + + GSR+++
Sbjct: 65 SERQRDREKNKDFVHSPLIH-----NNTSVTVTDDKGNKKTGAPAGRLEEIQGGSRRSTK 119
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG-LGAGRDSAL----RALRAIGFTIVSICDVTM 115
+AA+ + A+N GM S+ V+ G +G+ A+ R I+ I DVT
Sbjct: 120 YAAEATAEHVGRSAKNLGMKSVVVEAKGSTYSGKKKAVIPSPRKGVGRKSLIMHIHDVTQ 179
Query: 116 IAHNGCRPRKRRRI 129
++HNGCR ++RR+
Sbjct: 180 LSHNGCRLPRKRRV 193
>gi|289807369|ref|ZP_06537998.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 56
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 1 MKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 56
>gi|159131109|gb|EDP56222.1| 37S ribosomal protein S11, putative [Aspergillus fumigatus A1163]
Length = 205
Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV + +NT +T+T P+GN + S +GF ++ A T + Q
Sbjct: 83 PPHHLHVYAHKHNTLLTLTQPNGNPMLSMSCGHLGFRKGGRSGYDPAYQLTSHVFGQIQE 142
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G + LE+ G G GR++ + L + I + + D T I G R RK R
Sbjct: 143 RGFLMDIKRLEIVFQGFGQGREAFTKVLLGSEGKNIRGLVSRVTDSTRIKFGGTRSRKVR 202
Query: 128 RI 129
R+
Sbjct: 203 RL 204
>gi|328768635|gb|EGF78681.1| hypothetical protein BATDEDRAFT_90434 [Batrachochytrium
dendrobatidis JAM81]
Length = 150
Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVV 50
M +++ +E + V G A + ++FN+T + +TD G TI + +
Sbjct: 1 MAPKVKKVQQQENVQLGPKALEGENVFGVARIFASFNDTFVHVTDLTGRETIVRVTGGMK 60
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG--------RDSALRALRA 102
+ ++SP+AA +A D + K + G+++L +K+ G SALRAL
Sbjct: 61 VKADRDESSPYAAMLAAQDVAVKCKEVGITALHIKLRATGGTGTKTPGPGAQSALRALAR 120
Query: 103 IGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 121 AGMRIGRIEDVTPVP 135
>gi|290559363|gb|EFD92696.1| ribosomal protein S11 [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 128
Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G H+ +T NNT I +TD T + S + +SP AA A + +
Sbjct: 6 GVVHIYATLNNTIIHVTDISNAYTFSIKSGGSQVKADRLGSSPRAAMDAAKKIAEEISAK 65
Query: 78 GMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
G+ + VK+ G G A++AL G I+++ +VT + H+GC
Sbjct: 66 GIREVYVKIRAAGGISSKTTGPGARPAIKALERSGVRILNVENVTPVPHDGC 117
>gi|19173025|ref|NP_597576.1| 40S RIBOSOMAL PROTEIN S14 [Encephalitozoon cuniculi GB-M1]
gi|74630165|sp|Q8SSA6|RS14_ENCCU RecName: Full=40S ribosomal protein S14
gi|19168692|emb|CAD26211.1| 40S RIBOSOMAL PROTEIN S14 [Encephalitozoon cuniculi GB-M1]
Length = 134
Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 20 RAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
AH+ +T N+T + ITD G TIA + + + + SP+AA +A D + K G
Sbjct: 13 VAHIKATKNDTFVHITDMTGSETIAKITGGMRVKAQRDEGSPYAAMLAAQDVATKILGRG 72
Query: 79 MSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMI 116
+ L K+ G LG G +A+R L G + I DVT +
Sbjct: 73 VKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPV 118
>gi|295669602|ref|XP_002795349.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226285283|gb|EEH40849.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 168
Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T P+ + S +GF ++++ AA K Q
Sbjct: 46 PPHHLHVYSHKHNTHITLTRPNREPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 105
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G M LEV + G G GR++ + L + I + + D + + GCR + R
Sbjct: 106 EGHLLNMKRLEVVLRGFGPGREAFTKVLLGPEGKNIRNLVCRVTDASRLKFGGCRSKNVR 165
Query: 128 RI 129
R+
Sbjct: 166 RL 167
>gi|255098789|gb|ACU00735.1| 40S ribosomal protein S14 [Nosema bombycis]
gi|326559152|gb|ADZ95615.1| 40S ribosomal protein S14 [Nosema bombycis]
Length = 135
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
E K+ + H+ +T NNT I +TD G TI + S + SP+AA +A D
Sbjct: 6 ENKDAYTAVVHIKATKNNTMIHVTDVTGAETIYRKYGGMTVRSKRDEGSPYAAMMAAQDV 65
Query: 71 SAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMI 116
+ + G+ + + + G LG G A+R+L G + I DVT I
Sbjct: 66 AEAIKARGVKIIHILLRGAGGVKPKALGPGAQVAVRSLIRAGLQLGRIEDVTPI 119
>gi|11499864|ref|NP_071108.1| 30S ribosomal protein S11P [Archaeoglobus fulgidus DSM 4304]
gi|6226053|sp|O28001|RS11_ARCFU RecName: Full=30S ribosomal protein S11P
gi|2648247|gb|AAB88982.1| SSU ribosomal protein S11P (rps11P) [Archaeoglobus fulgidus DSM
4304]
Length = 133
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++K G AH+ S++NNT ITITD G IA S ++ + + +P+ A A
Sbjct: 4 KKKGGRWGIAHIYSSYNNTIITITDITGAEIIARVSGGMIVKADRDEGNPYTAMQAALRA 63
Query: 71 SAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
+A A+ G+ + +KV G G +A+RAL G I I DVT I H+G R
Sbjct: 64 AAIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTR 123
Query: 123 PRKRRR 128
P +R
Sbjct: 124 PPGGKR 129
>gi|115438498|ref|NP_001043554.1| Os01g0612100 [Oryza sativa Japonica Group]
gi|21104682|dbj|BAB93272.1| putative small subunit ribosomal protein [Oryza sativa Japonica
Group]
gi|113533085|dbj|BAF05468.1| Os01g0612100 [Oryza sativa Japonica Group]
Length = 257
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 4 SPSRIRNRERKNIVSGR---AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNS 59
+PS I + ++++V G+ +V+ N T +T+TD GN +S + G + S
Sbjct: 118 TPSHIFDEHKQSLVKGKRDFVYVLLKRNKTFVTVTDVRGNRKTGASAGCLEDKKGRSRLS 177
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEVKVSG---LGAGRDSALRALRAIGFT-------IVS 109
+A + + A+ G+ S+ +KV G + L +V
Sbjct: 178 KYATEATAEHVGRAARKMGLKSVVMKVKGTVFFNKKKKVILSFREGFRGERVREQSPVVF 237
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
I DVT + HNGCR K+R +
Sbjct: 238 IHDVTQLPHNGCRLPKQRLV 257
>gi|296204128|ref|XP_002749194.1| PREDICTED: 28S ribosomal protein S11, mitochondrial-like isoform 3
[Callithrix jacchus]
Length = 165
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + +A +S GF +RK + AAQ A +AKA G++ + V V GL
Sbjct: 66 TQIQVLSASNQPLAHASCGTEGFRNARKGTGIAAQTAGIAAAAKAIQKGVTHIRVVVKGL 125
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA+ L G ++SI D T I HNGCRPRK RR+
Sbjct: 126 GPGRLSAINGLTMGGLEVISITDNTPIPHNGCRPRKARRL 165
>gi|289618006|emb|CBI55583.1| unnamed protein product [Sordaria macrospora]
Length = 372
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQV----ATDDCSAKAQNH 77
H+ + +N IT+T P+ + I S +GF S + +A D ++
Sbjct: 255 HIYAHKHNCHITVTKPNRDAIISLSCGNLGFKKSNRKHYDSAYQLGAYVVDKMHQMNLHN 314
Query: 78 GMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ +EV + G G GR++ ++ L R + +IV + D T + G R +K RR+
Sbjct: 315 KIKKMEVVLRGFGPGREAVIKVLLGNEGRMLRNSIVRVADATRLKFGGTRSKKPRRL 371
>gi|156052643|ref|XP_001592248.1| hypothetical protein SS1G_06488 [Sclerotinia sclerotiorum 1980]
gi|154704267|gb|EDO04006.1| hypothetical protein SS1G_06488 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 255
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGS-RKNSPFAAQVAT---DDCSAKAQNH 77
HV +T +NT IT+T P+ I S +GF S RK+ A Q+A +A
Sbjct: 138 HVYATRHNTHITLTRPNREPIISVSCGNIGFRHSGRKHYDSAFQLAAFVMSRIHERAIGR 197
Query: 78 GMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LE+ + G GAGR++ +AL R + +V + D T + G R +K RR+
Sbjct: 198 DIQKLELVLRGFGAGREAVTKALLGTEGRWLRGKVVKVTDATRLKFGGTRSKKPRRL 254
>gi|323509143|dbj|BAJ77464.1| cgd7_130 [Cryptosporidium parvum]
gi|323510395|dbj|BAJ78091.1| cgd7_130 [Cryptosporidium parvum]
Length = 148
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 1 MP--KSPSRIRNRERKNIVSG-----RAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGF 52
M K +++ + + + G AH+ ++FN+T I +TD G TI + +
Sbjct: 1 MAPKKKETQVADVPFQQVREGQTNFAVAHIFASFNDTFIHVTDLSGRETIVRVTGGMKVK 60
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIG 104
+ +NSP+AA +A D + K + G+ +L +K+ +G G SALRAL G
Sbjct: 61 ADRDENSPYAAMMAAVDVAQKCKEFGIHALHIKLRAVGGVKSKTMGPGAQSALRALARAG 120
Query: 105 FTIVSICDVTMIA 117
I I DVT I
Sbjct: 121 MKIGRIEDVTPIP 133
>gi|320586975|gb|EFW99638.1| 37S ribosomal protein [Grosmannia clavigera kw1407]
Length = 272
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
R++ N+ + S +NT +T++ P+ + I S +GF +++ S AA
Sbjct: 140 RMKREVDDNMEEYHFSIYSHKHNTHVTVSKPNRDVIVSMSCGNLGFLKAQRGSYDAAYQL 199
Query: 67 TDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRALRAI-----GFTIVSICDVTMIA 117
G + LEV + G G GR++ + L I + D T +
Sbjct: 200 GAYVCDWLYQRGWHKTIQRLEVTLRGFGPGREAVSKILLGNEGRLLRRKITRVADATRLK 259
Query: 118 HNGCRPRKRRRI 129
G R +K RR+
Sbjct: 260 FGGTRSKKPRRL 271
>gi|121702019|ref|XP_001269274.1| hypothetical protein ACLA_025650 [Aspergillus clavatus NRRL 1]
gi|119397417|gb|EAW07848.1| hypothetical protein ACLA_025650 [Aspergillus clavatus NRRL 1]
Length = 233
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV + +NT +T+T P+GN + S +GF ++ A + Q
Sbjct: 111 PPHHLHVYAHKHNTLLTLTQPNGNPMLSMSCGHLGFRKGGRSGYDPAYQLASHVFGQIQE 170
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G + LEV G G GR++ + L R I + + D T I G R RK R
Sbjct: 171 RGYLMNIKRLEVVFQGFGLGREAFTKVLLGNEGRNIRGLVCRVTDSTRIKFGGTRSRKVR 230
Query: 128 RI 129
R+
Sbjct: 231 RL 232
>gi|189189054|ref|XP_001930866.1| mitochondrial ribosomal protein subunit S18 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972472|gb|EDU39971.1| mitochondrial ribosomal protein subunit S18 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 216
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+ HV +T +NT + +T P+ + + S +GF + + + AA ++ Q+
Sbjct: 95 KHKLHVYATKHNTHLCLTKPNRDPLISVSCGNIGFRKAGRGTYDAAYQLAAFLMSRIQDK 154
Query: 78 G----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G + LE+ G GAGR++ +A+ R + IV + D T + G R +K RR
Sbjct: 155 GLLPQIQKLELTYRGFGAGREAVTKAILGAEGRKVRPLIVKLSDSTRLKFGGTRSKKPRR 214
Query: 129 I 129
+
Sbjct: 215 L 215
>gi|258570271|ref|XP_002543939.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904209|gb|EEP78610.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 213
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV + +NT +T+T P+ + + S +GF S ++ A + AK Q G
Sbjct: 95 LHVYAHKHNTHLTLTRPNRDPMMSISCGSIGFRKSHRSGFDPAHQLSSYMMAKIQERGFL 154
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LEV + G G GR++ + L + I +V + D T + G R RR+
Sbjct: 155 MDIKQLEVVMRGFGPGREAFTKVLLGPEGKKIRDKVVRVTDATRLKFGGTRSPTVRRL 212
>gi|66362484|ref|XP_628208.1| 40S ribosomal protein S14 [Cryptosporidium parvum Iowa II]
gi|46229846|gb|EAK90664.1| 40S ribosomal protein S14 [Cryptosporidium parvum Iowa II]
Length = 131
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 20 RAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
AH+ ++FN+T I +TD G TI + + + +NSP+AA +A D + K + G
Sbjct: 10 VAHIFASFNDTFIHVTDLSGRETIVRVTGGMKVKADRDENSPYAAMMAAVDVAQKCKEFG 69
Query: 79 MSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +L +K+ +G G SALRAL G I I DVT I
Sbjct: 70 IHALHIKLRAVGGVKSKTMGPGAQSALRALARAGMKIGRIEDVTPIP 116
>gi|312137108|ref|YP_004004445.1| ssu ribosomal protein s11p [Methanothermus fervidus DSM 2088]
gi|311224827|gb|ADP77683.1| SSU ribosomal protein S11P [Methanothermus fervidus DSM 2088]
Length = 134
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++K G AH+ S+FNNT ITITD G TI S V + ++ +PFAA A
Sbjct: 4 KKKKREKWGIAHIYSSFNNTIITITDITGAETITQWSGGRVVRADRQEGTPFAAMEAATR 63
Query: 70 CSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNG- 120
+ A+ G+ + +KV G G +++RAL G I I DVT I H+G
Sbjct: 64 AAEDAKEKGIVGVHIKVRAPGGNGPRTPGPGAQASIRALARAGLKIGRIEDVTPIPHDGT 123
Query: 121 CRP--RKRRRI 129
RP RK RR+
Sbjct: 124 TRPGGRKGRRV 134
>gi|217071120|gb|ACJ83920.1| unknown [Medicago truncatula]
Length = 151
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T I +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G +ALRAL G I I DVT I
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQAALRALARSGMKIGRIEDVTPIP 136
>gi|260428527|ref|ZP_05782506.1| ribosomal protein S11 [Citreicella sp. SE45]
gi|260423019|gb|EEX16270.1| ribosomal protein S11 [Citreicella sp. SE45]
Length = 51
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
M +LEV+V G G+GR+SALRAL A+GF I SI DVT IAHNGCRP KRRR+
Sbjct: 1 MKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNGCRPPKRRRV 51
>gi|291334096|gb|ADD93768.1| putative ribosomal protein S11 [uncultured marine bacterium
MedDCM-OCT-S05-C222]
Length = 127
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
++ S++NN +T TD G TI S V S FAA A + + ++
Sbjct: 4 RAIVNIFSSYNNILMTATDLTGAETITTCSGGQVVKSSKDSGGQFAATRAAEKMADDLKD 63
Query: 77 HGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ L +K G G +A+RAL G TI I DVT IAH+G
Sbjct: 64 KEFTQLIIKYRAPGGNLSNNTGPGAQAAIRALTRAGMTITRIEDVTPIAHDGT 116
>gi|167042558|gb|ABZ07282.1| putative ribosomal protein S11 [uncultured marine microorganism
HF4000_ANIW133F6]
gi|167043057|gb|ABZ07768.1| putative ribosomal protein S11 [uncultured marine microorganism
HF4000_ANIW141C7]
Length = 126
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 18 SGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
H+ ST+NN IT TD G T+A S +V GS FAA A + +
Sbjct: 4 KAILHIFSTYNNVLITATDLTGAETLAKVSGGMVTKKGSDAGGQFAATRAAERIAEMLAE 63
Query: 77 HGMSSLEVKVSGLG-------AGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ VK G G G +A+RAL G +I I DVT I +G
Sbjct: 64 KEFDQVIVKYRGAGGNRSHSAPGATAAIRALTRAGVSITRIEDVTPIPTDGT 115
>gi|238498642|ref|XP_002380556.1| 37S ribosomal protein S11, putative [Aspergillus flavus NRRL3357]
gi|220693830|gb|EED50175.1| 37S ribosomal protein S11, putative [Aspergillus flavus NRRL3357]
Length = 235
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R HV S +NT +T+T P+GN + S +GF ++
Sbjct: 103 MIKQPYADR------APPHHLHVFSHKHNTILTLTRPNGNPLLSMSCGHLGFRKGHRSGY 156
Query: 61 FAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSIC 111
A T + Q G ++ LE+ G G GR++ + L + + + +
Sbjct: 157 DPAYQLTSHVFGQMQERGYLLDINRLEIVFRGFGLGREAFTKVLLGNEGKNVRGLVSRVT 216
Query: 112 DVTMIAHNGCRPRKRRRI 129
D T I G R RK RR+
Sbjct: 217 DSTRIKFGGTRSRKVRRL 234
>gi|114658730|ref|XP_001164587.1| PREDICTED: mitochondrial ribosomal protein S11 isoform 2 [Pan
troglodytes]
Length = 161
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
+ +++ + +H + T+I + +A++S GF ++K +
Sbjct: 37 ARQLQDAAAKQKVEQNAAPSHTKFS---TQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 93
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
AAQ A +A+A+ G+ + V V GLG GR SA+ L G ++SI D T I HNGC
Sbjct: 94 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGC 153
Query: 122 RPRKRRRI 129
RPRK R++
Sbjct: 154 RPRKARKL 161
>gi|217070962|gb|ACJ83841.1| unknown [Medicago truncatula]
Length = 151
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G A + ++FN+T I +TD G T+ + + + ++SP+AA +A D + + +
Sbjct: 27 VFGVARIFASFNDTFIHVTDLSGGETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK 86
Query: 76 NHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G+++L +K+ G G +ALRAL G + I DVT I
Sbjct: 87 ELGITALHIKLRATGGNKTKTPGPGAQAALRALARSGMKVGRIEDVTPIP 136
>gi|11466638|ref|NP_066321.1| ribosomal protein S11 [Malawimonas jakobiformis]
gi|10178676|gb|AAG13688.1|AF295546_14 ribosomal protein S11 [Malawimonas jakobiformis]
Length = 134
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
V T NNT +T+T+ GNT+ + S +GF G+++++ A+++ + G+
Sbjct: 26 LFVKKTQNNTFVTLTNIKGNTLVYYSTGKLGFKGAKRSTAHASEIIFQQIVKYCVSLGIK 85
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + +G+G + ++ L I SI + I +NGCR K RRI
Sbjct: 86 KIMLSFNGIGYNFKTYIKQLSLNKIRISSIRNNNPITYNGCRKPKVRRI 134
>gi|148675145|gb|EDL07092.1| mitochondrial ribosomal protein S11, isoform CRA_c [Mus musculus]
Length = 158
Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 58/100 (58%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + ++A +S GF ++K + AAQ A +AKA G++ + V V G+
Sbjct: 59 TQIQVVSATNASLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHIRVVVKGM 118
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA++ L G ++SI D T + HNGCRPRK RR+
Sbjct: 119 GPGRWSAIKGLTMGGLEVISITDNTPVPHNGCRPRKARRL 158
>gi|115391697|ref|XP_001213353.1| predicted protein [Aspergillus terreus NIH2624]
gi|114194277|gb|EAU35977.1| predicted protein [Aspergillus terreus NIH2624]
Length = 235
Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R HV + +NT +T+T P+GN + S +GF ++
Sbjct: 103 MIKQPYADR------APPHHLHVYAHKHNTILTLTRPNGNPLLSMSCGHLGFRKGGRSGY 156
Query: 61 FAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSIC 111
A T + Q G ++ LEV G GAGR++ + L R + + +
Sbjct: 157 DPAYQLTAHVFGQMQERGYLLDINRLEVVFRGFGAGREAFTKVLLGNEGRNVRGLVSRVA 216
Query: 112 DVTMIAHNGCRPRKRRRI 129
D T I G R RK RR+
Sbjct: 217 DSTRIKFGGTRSRKVRRL 234
>gi|212542913|ref|XP_002151611.1| 37S ribosomal protein S11, putative [Penicillium marneffei ATCC
18224]
gi|210066518|gb|EEA20611.1| 37S ribosomal protein S11, putative [Penicillium marneffei ATCC
18224]
Length = 241
Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV + +NT IT+T P+GN + +GF S ++ A + A+ Q G
Sbjct: 123 LHVYAHKHNTIITLTRPNGNPLMSLGCGNIGFRKSHRSGYDPAYQLSSHVFAQIQEKGLL 182
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + + + G G GR++ ++ L R + + + D T I G R R RR+
Sbjct: 183 HEIKGITLVLRGFGMGREAFIKVLLGNEGRNVRPLVTRVTDNTTIKFGGTRSRHVRRL 240
>gi|119496015|ref|XP_001264781.1| hypothetical protein NFIA_015770 [Neosartorya fischeri NRRL 181]
gi|119412943|gb|EAW22884.1| hypothetical protein NFIA_015770 [Neosartorya fischeri NRRL 181]
Length = 205
Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV + +NT +T+T P+GN + S +GF ++ A T + Q
Sbjct: 83 PPHHLHVYAHKHNTLLTLTQPNGNPMLSMSCGHLGFRKGGRSGYDPAYQLTSHVFGQIQE 142
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G + LE+ G G GR++ + L R I + + D T I G R RK R
Sbjct: 143 RGYLMNIQRLEIVFQGFGQGREAFTKVLLGSEGRNIRGLVSRVTDSTRIKFGGTRSRKVR 202
Query: 128 RI 129
R+
Sbjct: 203 RL 204
>gi|242015093|ref|XP_002428208.1| mitochondrial 28S ribosomal protein S11, putative [Pediculus
humanus corporis]
gi|212512769|gb|EEB15470.1| mitochondrial 28S ribosomal protein S11, putative [Pediculus
humanus corporis]
Length = 217
Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
V +T NNT + ++ N S + G+ +RK + AAQ + +A G+
Sbjct: 110 VISVRATRNNTIMNVSVKDMNKFFRSCG-MEGYKNTRKGTNVAAQATGYSVAMRAAKLGI 168
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
V +SG+G GR SAL+ L+ G IVSI D T G RP+K+RRI
Sbjct: 169 KIARVTISGIGPGRSSALKGLQLGGMKIVSITDQTKDTTAG-RPKKQRRI 217
>gi|196001257|ref|XP_002110496.1| hypothetical protein TRIADDRAFT_54565 [Trichoplax adhaerens]
gi|190586447|gb|EDV26500.1| hypothetical protein TRIADDRAFT_54565 [Trichoplax adhaerens]
Length = 138
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
E KN+ AHV +++NNT ITITD G TI W+S GF +++++ +A Q A + +
Sbjct: 55 EFKNLP--IAHVKASYNNTIITITDMKGKTINWASGGTEGFKNAKRSTTYAGQSAGEAAA 112
Query: 72 AKAQNHGMSSLEVKVSGLGAGRD 94
KA G++ + VKV G+G GR+
Sbjct: 113 KKAIRKGINKVRVKVKGMGPGRE 135
>gi|154314869|ref|XP_001556758.1| hypothetical protein BC1G_04776 [Botryotinia fuckeliana B05.10]
gi|150848314|gb|EDN23507.1| hypothetical protein BC1G_04776 [Botryotinia fuckeliana B05.10]
Length = 260
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD----DCSAKAQNH 77
HV +T +NT IT+T P+ I S +GF S + +A +A
Sbjct: 143 HVYATRHNTHITLTRPNREPIISLSCGNIGFRHSGRKHYDSAFQLASLVMTQIHERAIGR 202
Query: 78 GMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LE+ + G GAGR++ +AL R + +V + D T + G R +K RR+
Sbjct: 203 DIHKLELVLRGFGAGREAVTKALLGTEGRWLRGKVVKVTDATRLKFGGTRSKKPRRL 259
>gi|149057231|gb|EDM08554.1| similar to mitochondrial ribosomal protein S11 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 158
Score = 87.6 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 58/100 (58%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + ++A +S GF ++K + AAQ A +AKA G++ + V V G+
Sbjct: 59 TQIQVVSATNTSLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHIRVVVKGI 118
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA++ L G ++SI D T + HNGCRPRK RR+
Sbjct: 119 GPGRWSAIKGLTMGGLEVISITDNTPVPHNGCRPRKARRL 158
>gi|225719796|gb|ACO15744.1| 28S ribosomal protein S11, mitochondrial precursor [Caligus
clemensi]
Length = 193
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 23 VVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSL 82
V NNT+++ D + +SSP++ GF + K + A + +N G+ +
Sbjct: 86 VTCKKNNTKVSAYDAKDKFLFYSSPRMYGFLNASKRTEVANVTTGINMGQYLRNVGIKFI 145
Query: 83 EVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
++V+G GR ++ + G +VSI DVT + R +K+RRI
Sbjct: 146 RLEVNGFSTGRLPVVKGITQAGIQVVSISDVTHVDWGWSKRAKKQRRI 193
>gi|14495681|gb|AAH09451.1|AAH09451 Unknown (protein for IMAGE:3531918) [Homo sapiens]
Length = 160
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 57/100 (57%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + +A++S GF ++K + AAQ A +A+A+ G+ + V V GL
Sbjct: 61 TQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGL 120
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA+ L G ++SI D T I HNGCRPRK R++
Sbjct: 121 GPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 160
>gi|225719722|gb|ACO15707.1| 28S ribosomal protein S11, mitochondrial precursor [Caligus
clemensi]
Length = 193
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 23 VVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSL 82
V NNT+++ D + +SSP++ GF + K + A+ + +N G+ +
Sbjct: 86 VTCKRNNTKVSAYDAKDKFLFYSSPRMYGFLNASKRTEVASVTTGINMGQNLRNVGIKFI 145
Query: 83 EVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC-RPRKRRRI 129
++V+G GR ++ + G +VSI DVT + R +K+RR+
Sbjct: 146 RLEVNGFSTGRLPVVKGITQAGIQVVSISDVTHVDWGWSKRAKKQRRV 193
>gi|28872740|ref|NP_789775.1| 28S ribosomal protein S11, mitochondrial isoform b [Homo sapiens]
gi|119622406|gb|EAX02001.1| mitochondrial ribosomal protein S11, isoform CRA_c [Homo sapiens]
Length = 161
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 57/100 (57%)
Query: 30 TRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGL 89
T+I + +A++S GF ++K + AAQ A +A+A+ G+ + V V GL
Sbjct: 62 TQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGL 121
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
G GR SA+ L G ++SI D T I HNGCRPRK R++
Sbjct: 122 GPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 161
>gi|118586177|ref|ZP_01543651.1| ribosomal protein S11 [Oenococcus oeni ATCC BAA-1163]
gi|118433385|gb|EAV40077.1| ribosomal protein S11 [Oenococcus oeni ATCC BAA-1163]
Length = 113
Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 1 MPKSPSRI---RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M SR + R +KNI G AH+ STFNNT + ITD GN ++WSS +GF GSRK
Sbjct: 1 MASRTSRTSGHKRRAKKNIEKGVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSRK 60
Query: 58 NSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
++PFAAQ+A + + A M S+ + V G G
Sbjct: 61 STPFAAQLAGEAAAKAAMEQNMHSVAISVKGPG 93
>gi|46111761|ref|XP_382938.1| hypothetical protein FG02762.1 [Gibberella zeae PH-1]
Length = 230
Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
+ R + ++ H+ S +NT IT T P+ + I S +GF SR+ + +
Sbjct: 94 RKTHRKVQTKEDDLEPYHFHIYSHKHNTHITCTKPNRDPIISLSAGNIGFRKSRRGTFDS 153
Query: 63 AQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDV 113
A T + + G M+ LEV + G G GR++AL+ L + + IV + D
Sbjct: 154 AYSLTKYVLERLIHTGWPVKMNRLEVVMRGFGQGREAALKVLMSPEGKVLRDKIVRVADS 213
Query: 114 TMIAHNGCRPRKRRRI 129
T I G R K RR+
Sbjct: 214 TRIKFGGTRSEKPRRL 229
>gi|226495221|ref|NP_001148535.1| ribosomal protein S11 containing protein [Zea mays]
gi|195620090|gb|ACG31875.1| ribosomal protein S11 containing protein [Zea mays]
gi|223973845|gb|ACN31110.1| unknown [Zea mays]
Length = 252
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV+ T +T+TD GN +S + G + S +A++ + A+ G+
Sbjct: 133 VHVLLKRKKTFVTVTDSSGNKKTGASAGCLEDRKGRSRLSRYASEAVAEQVGRSARKMGL 192
Query: 80 SSLEVKVSG--LGAGRDSALRALR--------AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
SS+ +KV G + + + R I+ I DVT + HNGCR K+RR+
Sbjct: 193 SSIVMKVKGASFFKKKKKVILSFREGFRGERVRDQSPIMYIHDVTQLPHNGCRLPKQRRV 252
>gi|315042570|ref|XP_003170661.1| hypothetical protein MGYG_06648 [Arthroderma gypseum CBS 118893]
gi|311344450|gb|EFR03653.1| hypothetical protein MGYG_06648 [Arthroderma gypseum CBS 118893]
Length = 1511
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
H+ S N T+T P+G + S +GF S + AA K Q G
Sbjct: 117 LHIYSHRRNVHATLTKPNGEVLMSLSTGNIGFRKSHRGDFDAAHQLAVYTMGKIQERGFL 176
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPR 124
+++LEV + G G GR++ + L + + IV + D T + G R
Sbjct: 177 MQINALEVILRGFGPGREAFTKVLLGKEGKVLRERIVRVSDATRLKFGGTRSP 229
>gi|299747294|ref|XP_001836940.2| mitochondrial ribosomal protein subunit S18 [Coprinopsis cinerea
okayama7#130]
gi|298407453|gb|EAU84557.2| mitochondrial ribosomal protein subunit S18 [Coprinopsis cinerea
okayama7#130]
Length = 207
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 23/145 (15%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P+ R +E + H S+ NNT T+T G+TIAW S GF + +
Sbjct: 69 PQQQETTRKKEEVRLR---LHCHSSPNNTITTLTKQDGSTIAWFSGGSCGFKKGNRATYE 125
Query: 62 AAQVATDDCSAKAQNHGMSS-----------LEVKVSGLGAGRDSALRA------LRAIG 104
A K + + + +++ G G GRD ALR I
Sbjct: 126 AGYQCAVRSFRKIEE--IKNQIVSESKKNVVVDLFFKGFGQGRD-ALRGALLATEGEQIR 182
Query: 105 FTIVSICDVTMIAHNGCRPRKRRRI 129
+ +I D T I G R +K R+
Sbjct: 183 PLVATITDRTPIKIGGTRAKKMPRL 207
>gi|256072988|ref|XP_002572815.1| 28S ribosomal protein S11 [Schistosoma mansoni]
gi|238657980|emb|CAZ29047.1| 28S ribosomal protein S11, putative [Schistosoma mansoni]
Length = 194
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+++ + H++S NN T+TD +G + +S GF +RK S A Q
Sbjct: 76 DKQYYETPILHLLSRRNNVVATLTDCNGRVLNGTSCGAEGFRNARKMSTVAFQTVGISIG 135
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN-GCRPRKRRRI 129
KA+ G+ ++ V +GLG+ R L L G ++S+ D T + + G RP+K+RRI
Sbjct: 136 LKAKKLGIGAVRVVFNGLGSCRLPVLSGLNISGLKMISLTDDTKVHYGHGRRPKKQRRI 194
>gi|296807831|ref|XP_002844254.1| mitochondrial ribosomal protein subunit S18 [Arthroderma otae CBS
113480]
gi|238843737|gb|EEQ33399.1| mitochondrial ribosomal protein subunit S18 [Arthroderma otae CBS
113480]
Length = 243
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
+ + + I+N ++ H+ + N+ +T+T P+G + S +GF +
Sbjct: 95 LARVSNLIKNPQQTAEPPHHLHIYAHKRNSHVTLTKPNGEVLLSLSTGNIGFRKGHRKDY 154
Query: 61 FAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSIC 111
A+ K Q G ++ LEV G G GR++ + L + + IV +
Sbjct: 155 DASHQLAVYSMGKIQERGFLMDINCLEVIFRGFGPGREAFTKVLLGKEGKVLRERIVRVS 214
Query: 112 DVTMIAHNGCRPR 124
D T + G R
Sbjct: 215 DATRLKFGGTRSP 227
>gi|170291192|ref|YP_001738008.1| ribosomal protein S11 [Candidatus Korarchaeum cryptofilum OPF8]
gi|224493243|sp|B1L796|RS11_KORCO RecName: Full=30S ribosomal protein S11P
gi|170175272|gb|ACB08325.1| ribosomal protein S11 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 132
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 19 GRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+ S+FN+T + ITD G T+A S + + + SP+AA A + +AQ
Sbjct: 10 GVAHIYSSFNDTIVHITDITGAETLARYSGGMFVDADRLEGSPYAALKAAMAAAKEAQRK 69
Query: 78 GMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
G++ L VKV G G +A+R L T++ + DVT I H+
Sbjct: 70 GITHLIVKVRAPGGIKSRIPGPGATAAIRGLSRSQLTLIRVEDVTPIPHD 119
>gi|11466591|ref|NP_066481.1| ribosomal protein S11 [Rhodomonas salina]
gi|10444178|gb|AAG17752.1|AF288090_28 ribosomal protein S11 [Rhodomonas salina]
Length = 118
Score = 86.0 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG 78
G H+ + NNT I+ + S V+G +++++ FA+Q KA G
Sbjct: 8 GIVHINNNTNNTLISFLTIEKKVLFTSGTGVLGLKKAKRSTSFASQNLAFSLGVKAYKLG 67
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++V G R S+L+ + ++ I D T I NGC+ RK+RRI
Sbjct: 68 IRFVQVYFKGFSKNRKSSLKGILLANLKVILIKDFTRIPFNGCKQRKKRRI 118
>gi|145502717|ref|XP_001437336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404486|emb|CAK69939.1| unnamed protein product [Paramecium tetraurelia]
Length = 263
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 137 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 196
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 197 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 248
>gi|256072986|ref|XP_002572814.1| ribosomal protein S11 [Schistosoma mansoni]
gi|238657979|emb|CAZ29046.1| ribosomal protein S11, putative [Schistosoma mansoni]
Length = 185
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+++ + H++S NN T+TD +G + +S GF +RK S A Q
Sbjct: 67 DKQYYETPILHLLSRRNNVVATLTDCNGRVLNGTSCGAEGFRNARKMSTVAFQTVGISIG 126
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN-GCRPRKRRRI 129
KA+ G+ ++ V +GLG+ R L L G ++S+ D T + + G RP+K+RRI
Sbjct: 127 LKAKKLGIGAVRVVFNGLGSCRLPVLSGLNISGLKMISLTDDTKVHYGHGRRPKKQRRI 185
>gi|302884350|ref|XP_003041071.1| hypothetical protein NECHADRAFT_94184 [Nectria haematococca mpVI
77-13-4]
gi|256721967|gb|EEU35358.1| hypothetical protein NECHADRAFT_94184 [Nectria haematococca mpVI
77-13-4]
Length = 245
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG--- 78
H+ S +NT IT T P+ I S +GF R+ + +A T + + G
Sbjct: 129 HIYSHKHNTHITCTKPNREPIISLSAGNIGFRKFRRGTFDSAYSLTKYVLERLIHTGWPM 188
Query: 79 -MSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
M+ LEV + G G GR++AL+ L + + IV + D T I G R K RR+
Sbjct: 189 KMNRLEVVLRGFGQGREAALKVLMSPEGKVLRDKIVRVADSTRIKFAGTRSEKPRRL 245
>gi|56756334|gb|AAW26340.1| SJCHGC02467 protein [Schistosoma japonicum]
gi|226485817|emb|CAX75328.1| hypotherical protein [Schistosoma japonicum]
gi|226485819|emb|CAX75329.1| hypotherical protein [Schistosoma japonicum]
gi|226485821|emb|CAX75330.1| hypotherical protein [Schistosoma japonicum]
gi|226485823|emb|CAX75331.1| hypotherical protein [Schistosoma japonicum]
Length = 185
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H++S NN T+TD +G + +S GF +RK S AAQ KA+ G+
Sbjct: 75 ILHLISRKNNLIATLTDCNGRVLNGTSCGAEGFRNARKKSTVAAQTVGISVGLKAKKLGI 134
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN-GCRPRKRRRI 129
++ V + G G+ + SAL L G IVS+ D T + + G RPRK RR+
Sbjct: 135 GAVRVILRGKGSDKLSALSGLNISGLKIVSLTDDTNVHYGHGKRPRKPRRL 185
>gi|58699349|ref|ZP_00374122.1| ribosomal protein S11 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534135|gb|EAL58361.1| ribosomal protein S11 [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 95
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALRALRAIGFT 106
GFSGSRK++P+AA A + + A GM + V + G G G ++A++AL++ G T
Sbjct: 13 GACGFSGSRKSTPYAAGKAAEAAAKNAIERFGMKVVSVIIRGPGFGTEAAVKALQSCGLT 72
Query: 107 IVSICDVTMIAHNGCRPRKRRRI 129
+ SI D T I HNGCR RK+RR+
Sbjct: 73 VTSIADKTAIPHNGCRLRKKRRV 95
>gi|226470440|emb|CAX70500.1| hypotherical protein [Schistosoma japonicum]
Length = 185
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H++S NN T+TD +G + +S GF +RK S AAQ KA+ G+
Sbjct: 75 ILHLISRKNNLIATLTDCNGRVLNGTSCGAEGFRNARKKSTVAAQTVGISVGLKAKKLGI 134
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHN-GCRPRKRRRI 129
++ V + G G+ + SAL L G IVS+ D T + + G RPRK RR+
Sbjct: 135 GAVRVILRGKGSDKLSALSGLNISGLKIVSLTDDTNVHYGHGKRPRKPRRL 185
>gi|404594|gb|AAD10543.1| uncertain [Mycoplasma genitalium]
Length = 82
Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+++ N+ SG HV + NNT ++ TDP GN + W+S VGF G RK +P++A VA D
Sbjct: 3 KKKKINVPSGLIHVSCSPNNTIVSATDPSGNVLCWASSGTVGFKGFRKKTPYSAGVAADK 62
Query: 70 CSAKAQNHGMSSLEVKVSGL 89
+ + GM S+++ + G
Sbjct: 63 VAKTVKEMGMGSVKMYLKGT 82
>gi|322693818|gb|EFY85666.1| 37S ribosomal protein S11 [Metarhizium acridum CQMa 102]
Length = 161
Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG--- 78
HV S +NT IT T P+ I S +G+ SR+ + +A T + + G
Sbjct: 45 HVYSHKHNTHITCTKPNREPIISMSCGNIGYRKSRRGTFDSAYSLTKYVLERLIHTGWPM 104
Query: 79 -MSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LE+ + G G GR++A++ L + + IV + D T I G R K RR+
Sbjct: 105 KIQRLELVLRGFGQGREAAVKVLMSPEGKVLREKIVRVADSTRIKFGGTRSEKPRRL 161
>gi|322711641|gb|EFZ03214.1| 37S ribosomal protein S11 [Metarhizium anisopliae ARSEF 23]
Length = 161
Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG--- 78
HV S +NT IT T P+ I S +G+ SR+ + +A T + + G
Sbjct: 45 HVYSHKHNTHITCTKPNREPIISMSCGNIGYRKSRRGTFDSAYSLTKYVLERLIHTGWPI 104
Query: 79 -MSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ LE+ + G G GR++A++ L + + IV + D T I G R K RR+
Sbjct: 105 KIQRLELVLRGFGQGREAAVKVLMSPEGKVLREKIVRVADSTRIKFGGTRSEKPRRL 161
>gi|253745178|gb|EET01261.1| Ribosomal protein S14 [Giardia intestinalis ATCC 50581]
Length = 145
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSP 60
+P + + + H+ + N+T I +TD G TI S + + S
Sbjct: 6 AYAPENLPAKNNNSEAFAVCHIYAGKNDTFIHVTDLSGRETIGRVSGGMKVKRHCDEPSA 65
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICD 112
+AA AT D + G++++ +K+ G G +A+RAL G I I D
Sbjct: 66 YAAMQATQDLIEIITDRGITAVHIKIRADGGTGKRVYGQGGSAAIRALVRGGIKIGRIED 125
Query: 113 VTMIA 117
T I
Sbjct: 126 STPIP 130
>gi|145485845|ref|XP_001428930.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396019|emb|CAK61532.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 62 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 121
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 122 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 173
>gi|327292845|ref|XP_003231120.1| mitochondrial ribosomal protein subunit S18 [Trichophyton rubrum
CBS 118892]
gi|326466750|gb|EGD92203.1| mitochondrial ribosomal protein subunit S18 [Trichophyton rubrum
CBS 118892]
Length = 235
Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
H+ S N T+T P+ + S +GF + AA K Q G
Sbjct: 117 LHIYSHRRNVHATLTKPNNEVLMSVSTGNIGFRKGHRGDYDAAHQLAVYTMGKIQERGFL 176
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ LEV + G G GR++ + L + + IV + D T + G R RR+
Sbjct: 177 MQINGLEVILRGFGPGREAFTKVLLGKEGKVLRERIVRVSDSTRLKFGGTRSPAVRRL 234
>gi|58427777|gb|AAW76814.1| 30S ribosomal protein S11 [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 51
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
M SLEV++ G G GR+SA+R+L +G+ I +I DVT I HNGCRP K+RR+
Sbjct: 1 MKSLEVRIKGPGPGRESAVRSLNNVGYKITNIIDVTPIPHNGCRPPKKRRV 51
>gi|159111843|ref|XP_001706152.1| Ribosomal protein S14 [Giardia lamblia ATCC 50803]
gi|42491239|dbj|BAD10936.1| ribosomal protein S14 [Giardia intestinalis]
gi|157434245|gb|EDO78478.1| Ribosomal protein S14 [Giardia lamblia ATCC 50803]
gi|308160737|gb|EFO63211.1| Ribosomal protein S14 [Giardia lamblia P15]
Length = 145
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ + H+ + N+T I +TD G TI S + + S +AA AT D
Sbjct: 15 KNNNSEAFAVCHIYAGKNDTFIHVTDLSGRETIGRVSGGMKVKRHCDEPSAYAAMQATQD 74
Query: 70 CSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G++++ +K+ G G +A+RAL G I I D T I
Sbjct: 75 LIEIITDRGITAVHIKIRADGGTGKRVYGQGGSAAIRALVRGGIKIGRIEDSTPIP 130
>gi|302502670|ref|XP_003013296.1| 37S ribosomal protein S11, putative [Arthroderma benhamiae CBS
112371]
gi|291176859|gb|EFE32656.1| 37S ribosomal protein S11, putative [Arthroderma benhamiae CBS
112371]
Length = 235
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
H+ S N T+T P+ + + S +GF + AA K Q G
Sbjct: 117 LHIYSHRRNVHATLTKPNNDVLMSVSTGNIGFRKGHRGDYDAAHQLAVYTMGKIQERGFL 176
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ LEV + G G GR++ + L + + IV + D T + G R RR+
Sbjct: 177 MQINGLEVILRGFGPGREAFTKVLLGKEGKVLRERIVRVSDSTRLKFGGTRSPAVRRL 234
>gi|145476241|ref|XP_001424143.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145511411|ref|XP_001441632.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391206|emb|CAK56745.1| unnamed protein product [Paramecium tetraurelia]
gi|124408884|emb|CAK74235.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 48 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 107
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 108 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 159
>gi|145524914|ref|XP_001448279.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415823|emb|CAK80882.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 48 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 107
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 108 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 159
>gi|145517969|ref|XP_001444862.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412295|emb|CAK77465.1| unnamed protein product [Paramecium tetraurelia]
Length = 176
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 48 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 107
Query: 74 AQNHGMSSLEVKVSG----------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 108 LKTLKINALHIKLRARGGIYLNHFNPGPGAQAALRALARLGLKIGRIEDVTPIP 161
>gi|310795796|gb|EFQ31257.1| hypothetical protein GLRG_06401 [Glomerella graminicola M1.001]
Length = 234
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGF-SGSRKNSPFAAQVATDDCSAKAQ---NH 77
H+ S +NT +T+T P I S +GF G R+ A Q+ +
Sbjct: 118 HIYSHKHNTHVTVTKPDRGAIVSLSTGNIGFKKGKRRGYDPAYQLTAYVLEKLVYGGWHK 177
Query: 78 GMSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ LE+ + G G GRD+A+R L A +V + D T + G + + RRI
Sbjct: 178 KINKLEIVLRGFGPGRDAAVRVLMAPEGKVWRSKVVRVADSTRLKFGGTKSKNPRRI 234
>gi|145523347|ref|XP_001447512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415023|emb|CAK80115.1| unnamed protein product [Paramecium tetraurelia]
Length = 397
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 271 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 330
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 331 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 382
>gi|308800774|ref|XP_003075168.1| 40S ribosomal protein S14 (ISS) [Ostreococcus tauri]
gi|116061722|emb|CAL52440.1| 40S ribosomal protein S14 (ISS) [Ostreococcus tauri]
Length = 243
Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 54/157 (34%)
Query: 15 NIVSGRAHVVSTFNNTRI------------------------------------------ 32
+V G AH+ ++FN+T +
Sbjct: 27 ELVFGVAHIFASFNDTFVVRESPSERMIALCTTVDVRATSTVCIKGRVRPETDLARVRTP 86
Query: 33 ---TITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV-- 86
+TD G T++ + + + ++SP+AA +A D +A+ + G+++L +K+
Sbjct: 87 KSQHVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRA 146
Query: 87 ------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G G SALRAL G I I DVT
Sbjct: 147 KGGNKTKSPGPGGQSALRALSRSGIKIGRIEDVTPTP 183
>gi|11465649|ref|NP_049320.1| ribosomal protein S11 [Porphyra purpurea]
gi|4106956|gb|AAD03123.1| ribosomal protein S11 [Porphyra purpurea]
Length = 118
Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
+G + + NNT +TD G AW++ G +KN + +A N
Sbjct: 7 TGILFLSFSSNNTHFLLTDHAGQVKAWTTAGRSKIKGVKKNLSLSIFETIRFLEQEANNL 66
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
S V++ G G + + + L+ +S+ D+T +NGCR ++R++
Sbjct: 67 NYSYFHVRIKGWGKNKKNIFKILKQSKLKFISVIDITSCPYNGCRIPRKRKL 118
>gi|302665280|ref|XP_003024252.1| 37S ribosomal protein S11, putative [Trichophyton verrucosum HKI
0517]
gi|291188299|gb|EFE43641.1| 37S ribosomal protein S11, putative [Trichophyton verrucosum HKI
0517]
Length = 312
Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
H+ S N T+T P+ + + S +GF + AA K Q G
Sbjct: 117 LHIYSHRRNVHATLTKPNNDVLMSVSTGNIGFRKGHRGDYDAAHQLAVYTMGKIQERGFL 176
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPR 124
++ LEV + G G GR++ + L + + IV + D T + G R
Sbjct: 177 MQINGLEVILRGFGPGREAFTKVLLGKEGKVLRERIVRVSDSTRLKFGGTRSP 229
>gi|226510173|ref|NP_001152443.1| 40S ribosomal protein S14 [Zea mays]
gi|195656349|gb|ACG47642.1| 40S ribosomal protein S14 [Zea mays]
Length = 160
Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
Query: 1 MPKSPSRIRNRERKNI---------VSGRAHVVSTFNNTRITITDPHGNTIA--WSSPKV 49
M + +R E + V G AH+ ++FN+T I GNT + W +
Sbjct: 1 MSRRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFI-----EGNTGSDHWYYRAM 55
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVK--------VSGLGAGRDSALRALR 101
+ ++ P+AA +A D + + + G+++L +K + G G SALRAL
Sbjct: 56 KVKADRDESLPYAAMLAAQDAAQRCKELGITALNIKLRAIGGNKIKTPGPGAQSALRALA 115
Query: 102 AIGFTIVSICDVTMIAHNGCRPRKRR 127
G I I +VT + + R + R
Sbjct: 116 RSGMKIGRIENVTPVPTDSIRRKGGR 141
>gi|161899265|ref|XP_001712859.1| ribosomal protein S14 [Bigelowiella natans]
gi|75756353|gb|ABA27247.1| ribosomal protein S14 [Bigelowiella natans]
Length = 145
Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVA 66
I N+ K + G H++ST N+T I +TD G TI+ S +V +G K S + A +A
Sbjct: 2 INNKYIKKYLFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLA 61
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGA--------GRDSALRALRAIGFTIVSICDVTMIAH 118
T S + G+++L +K+ G G + + L +GF I I D T
Sbjct: 62 TQKVSNVCKVLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPTPT 121
Query: 119 NGCRPR 124
NG R +
Sbjct: 122 NGTRRK 127
>gi|213407600|ref|XP_002174571.1| 40S ribosomal protein S14 [Schizosaccharomyces japonicus yFS275]
gi|212002618|gb|EEB08278.1| 40S ribosomal protein S14 [Schizosaccharomyces japonicus yFS275]
Length = 139
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A D +AK
Sbjct: 13 ELVFGVAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDVAAK 72
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAI--------GFTIVSICDVTMIA 117
+ G+++L +K+ G G I I DVT I
Sbjct: 73 CKEVGITALHIKIRATGGTGTKTPGPGAQAALRALARAGMRIGRIEDVTPIP 124
>gi|323398664|ref|YP_004222739.1| ribosomal protein S11 [Glaucocystis nostochinearum]
gi|321401357|gb|ADW83111.1| ribosomal protein S11 [Glaucocystis nostochinearum]
Length = 121
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
+ + ++ T +NT +T+T+ +GN S VG ++++ + AQ+ D K
Sbjct: 7 KFIDAKLYIKITSSNTILTLTNMNGNVFVTISAGSVGAKKTKRSLEYFAQLTIDKILKKL 66
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ L + ++G+G + ++ L+ I I D T I H GCR +K RR+
Sbjct: 67 NQLNITRLILFLNGVGKNKFVCIKRLKEANIQIFKIIDTTQIPHGGCRKKKLRRL 121
>gi|213404056|ref|XP_002172800.1| 40S ribosomal protein S14 [Schizosaccharomyces japonicus yFS275]
gi|212000847|gb|EEB06507.1| 40S ribosomal protein S14 [Schizosaccharomyces japonicus yFS275]
Length = 139
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + +TD G TI + + + ++SP+AA +A D +AK
Sbjct: 13 ELVFGVAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDVAAK 72
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAI--------GFTIVSICDVTMIA 117
+ G+++L +K+ G G I I DVT I
Sbjct: 73 CKEVGITALHIKIRATGGTGTKTPGPGAQAALRALARAGMRIGRIEDVTPIP 124
>gi|321268738|gb|ADW79187.1| ribosomal protein S11 [Cyanophora paradoxa]
Length = 151
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSS 81
++ T NN TITD ++ S +VGF S+++S +A ++ TD K + +
Sbjct: 43 YIKITSNNILFTITDKRNKVLSIISSGMVGFKKSKRSSLYAVELTTDYVIKKIIQYNLYK 102
Query: 82 LEVKVSGLG-AGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ G+ R + + LR + I D T IAH GCR +K RR+
Sbjct: 103 FYLYFKGINRKKRRTCIALLRKAKLFFLKIKDNTPIAHGGCRQKKSRRL 151
>gi|145506869|ref|XP_001439395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406579|emb|CAK71998.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 48 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 107
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 108 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 159
>gi|307596610|ref|YP_003902927.1| 30S ribosomal protein S11P [Vulcanisaeta distributa DSM 14429]
gi|307551811|gb|ADN51876.1| ribosomal protein S11P [Vulcanisaeta distributa DSM 14429]
Length = 169
Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G A+V S++NNT I ITD G T+A S V + K SP+AA +A +
Sbjct: 42 RKLRWGVAYVYSSYNNTIIIITDLTGAETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQ 101
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIA 117
A + G++++ +KV G G +A+RAL G I I DVT I
Sbjct: 102 IAMSRGINAVHIKVKAPGGYGPKTPGPGAAAAIRALARAGLIIGRIEDVTPIP 154
>gi|100913253|gb|ABF69524.1| ribosomal protein S14 [Pristionchus pacificus]
Length = 120
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + ITD G TI + + + + SP+AA +A D
Sbjct: 23 KEGENV-FGVAHIFASFNDTFVHITDFSGRETIVRVTGGMKVKADRDEASPYAAMLAAQD 81
Query: 70 CSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + G+++L +K+ G G SALRAL
Sbjct: 82 VAERCKQLGINALHIKLRATGGTRTKTPGPGAQSALRAL 120
>gi|325968378|ref|YP_004244570.1| 30S ribosomal protein S11P [Vulcanisaeta moutnovskia 768-28]
gi|323707581|gb|ADY01068.1| 30S ribosomal protein S11P [Vulcanisaeta moutnovskia 768-28]
Length = 165
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ + G A+V S++NNT I ITD G T+A S V + K SP+AA +A +
Sbjct: 38 RKLRWGVAYVYSSYNNTIIIITDLTGAETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQ 97
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIA 117
A + G++++ +KV G G +A+RAL G I I DVT I
Sbjct: 98 IAMSRGINAVHIKVKAPGGYGPKTPGPGAAAAIRALARAGLIIGRIEDVTPIP 150
>gi|45187706|ref|NP_983929.1| ADL167Wp [Ashbya gossypii ATCC 10895]
gi|44982467|gb|AAS51753.1| ADL167Wp [Ashbya gossypii ATCC 10895]
Length = 199
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 32/157 (20%)
Query: 5 PSRIRNRERKNIVSGRAHVVSTFNNTRITIT----DPH---------------------G 39
P + + +V + + T NNT T + D +
Sbjct: 43 PRSANRKPDEQVVKYVLNCLFTKNNTHFTYSAVVEDRNFLANNAHLSYNDKFLYYLQLPQ 102
Query: 40 NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSAL 97
S +GF + + A + + +E+ + G GR++ +
Sbjct: 103 RVRLHLSTGQLGFRKAARGEYEATFQTAAKLFQTLRERQLLDKGVEIIMKDFGKGREAFI 162
Query: 98 -----RALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + + + D T + G R +RRR+
Sbjct: 163 AALNGKEGNQVRPAVTRVSDATPLKFGGVRAPRRRRL 199
>gi|6324023|ref|NP_014093.1| Mrps18p [Saccharomyces cerevisiae S288c]
gi|1353100|sp|P42847|RT18_YEAST RecName: Full=37S ribosomal protein S18, mitochondrial; AltName:
Full=YmS18; Flags: Precursor
gi|1050854|gb|AAC49092.1| Ynl0397p [Saccharomyces cerevisiae]
gi|1302405|emb|CAA96234.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270154|gb|AAS56458.1| YNL306W [Saccharomyces cerevisiae]
gi|259149066|emb|CAY82307.1| Mrps18p [Saccharomyces cerevisiae EC1118]
gi|285814361|tpg|DAA10255.1| TPA: Mrps18p [Saccharomyces cerevisiae S288c]
Length = 217
Score = 80.2 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|151944243|gb|EDN62522.1| YmS18 [Saccharomyces cerevisiae YJM789]
Length = 217
Score = 80.2 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|190409270|gb|EDV12535.1| 40S ribosomal protein MRP18, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|256269467|gb|EEU04758.1| Mrps18p [Saccharomyces cerevisiae JAY291]
gi|323303292|gb|EGA57088.1| Mrps18p [Saccharomyces cerevisiae FostersB]
gi|323331828|gb|EGA73240.1| Mrps18p [Saccharomyces cerevisiae AWRI796]
gi|323352819|gb|EGA85121.1| Mrps18p [Saccharomyces cerevisiae VL3]
Length = 217
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|323346948|gb|EGA81226.1| Mrps18p [Saccharomyces cerevisiae Lalvin QA23]
Length = 217
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|301500975|ref|YP_003795440.1| ribosomal protein S11 [Alveolata sp. CCMP3155]
gi|300069521|gb|ADJ66628.1| ribosomal protein S11 [Chromerida sp. RM11]
Length = 143
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 20 RAHVVSTFNNTRITITDPHGN----------------TIAWSSPKVVGFSGSRKNSPFAA 63
+V T N +T+ D T+A S GF G RK +PFA
Sbjct: 13 VVYVYVTRQNVILTLVDLKSRKGWLDTIDRKRSFLVRTVACVSSGQCGFRGKRKTAPFAI 72
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAH 118
+ T A + G + L + + G G R++ L+ + I+S+ DVT+ H
Sbjct: 73 NLTTKKLLKSASDLGYTHLRLVLRGNGYNRETILKTFLRAKTKQHRIPILSVTDVTLAPH 132
Query: 119 NGCRPRKRRR 128
NGCRP+ R+R
Sbjct: 133 NGCRPKNRKR 142
>gi|254574308|ref|XP_002494263.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|238034062|emb|CAY72084.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|328353916|emb|CCA40313.1| 30S ribosomal protein S11 [Pichia pastoris CBS 7435]
Length = 213
Score = 79.9 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 48/160 (30%), Gaps = 33/160 (20%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITIT----DPH-------------------- 38
+ + R + +V H T NNT +T+T D +
Sbjct: 54 EELKQQRRVPNEQVVKYVLHCSFTKNNTHLTLTEVVEDKNFLKNNEQLSSNEQALYYLQL 113
Query: 39 -GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---SSLEVKVSGLGAGRD 94
S VGF +++ A + G LEV G GR
Sbjct: 114 PQRVKVSLSTGCVGFRKAQRGEYEAGYQTAAKMFETIETRGYLRNKPLEVVFKDFGKGRQ 173
Query: 95 SALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ AL I I + D T + G R + RR+
Sbjct: 174 GFVSALTGKEGTNIRGKISRLTDKTNLKFGGVRMPRPRRL 213
>gi|145523966|ref|XP_001447816.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415338|emb|CAK80419.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH++ST+N+T I ITD G T+A + + S ++SP+AA A D K
Sbjct: 48 ELVFGVAHILSTWNDTFIHITDLTGRETLARVTGGMKVKSDREESSPYAAMQAAKDVYEK 107
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ +++L +K+ G G +ALRAL +G I I DVT I
Sbjct: 108 LKTLKINALHIKLRARGGVDTRQPGPGAQAALRALARLGLKIGRIEDVTPIP 159
>gi|323335970|gb|EGA77247.1| Mrps18p [Saccharomyces cerevisiae Vin13]
Length = 217
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYIJHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|255940338|ref|XP_002560938.1| Pc16g06010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585561|emb|CAP93271.1| Pc16g06010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 233
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV +NT +T+T P+G+ + +GF + ++ A + + Q
Sbjct: 111 PPHHLHVYCHKHNTILTLTRPNGSPLLSIGCGQIGFRKAGRSGFDPAYQLSAHVMNQIQE 170
Query: 77 HG----MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRR 127
G + LEV G G GRD+ + L R + + + D T + G R R R
Sbjct: 171 KGFLMEIERLEVVYRGFGKGRDAFTKVLLGHEGRHLRGLVARVTDSTRLKFGGTRSRHVR 230
Query: 128 RI 129
R+
Sbjct: 231 RL 232
>gi|170064413|ref|XP_001867515.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167881805|gb|EDS45188.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 152
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
IVSG AH+ ++FN+T + +TD + + SR+ P+A D + K
Sbjct: 50 IVSGLAHIYASFNDTFVNVTDLSDKKTDLR--RHLSQGQSRRVLPYA----AQDVAEKFY 103
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
G+++L + + + ALRA+ I I DVT I + RP
Sbjct: 104 LLGITALRINL----PKEEMALRAMACSSMKIGRIEDVTSIPSDSTRP 147
>gi|83273504|ref|XP_729428.1| ribosomal protein S11 [Plasmodium yoelii yoelii str. 17XNL]
gi|23487184|gb|EAA20993.1| ribosomal protein S11, putative [Plasmodium yoelii yoelii]
Length = 117
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAAR 84
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALR 98
+ G++++ +K+ G G SALR
Sbjct: 85 LKELGVTAIHIKLRASGGTKSKTPGPGAQSALR 117
>gi|84508610|ref|YP_448657.1| ribosomal protein S11 [Desmarestia viridis]
gi|45925642|gb|AAS79043.1| ribosomal protein S11 [Desmarestia viridis]
Length = 163
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSRKNSPFAAQVAT 67
E+K G ++ T N T+ +P+ + S V R N A +
Sbjct: 32 EQKMNKLGSIYIKCTKRNIFCTLINPNNKKVETSCSLRVPAYDNKHNERDNLYTRAVLLG 91
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
+ K G L + ++G+ G+ + +R+ + I SI +T HNGCRP K R
Sbjct: 92 RLLAQKTIALGYKELIIYLTGMNKGQLAIIRSFSKVEIDIDSIVLLTRNPHNGCRPAKVR 151
Query: 128 R 128
R
Sbjct: 152 R 152
>gi|19112529|ref|NP_595737.1| 40S ribosomal protein S14 [Schizosaccharomyces pombe 972h-]
gi|19115099|ref|NP_594187.1| 40S ribosomal protein S14 [Schizosaccharomyces pombe 972h-]
gi|6094155|sp|O14150|RS14_SCHPO RecName: Full=40S ribosomal protein S14
gi|2414647|emb|CAB16591.1| 40S ribosomal protein S14 [Schizosaccharomyces pombe]
gi|3006190|emb|CAA18410.1| 40S ribosomal protein S14 [Schizosaccharomyces pombe]
Length = 139
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + ITD G TI + + + ++SP+AA +A D +AK
Sbjct: 13 ELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAK 72
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G +ALRAL G I I DVT I
Sbjct: 73 CKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIP 124
>gi|84508532|ref|YP_448696.1| ribosomal protein S11 [Dictyota dichotoma]
gi|45925700|gb|AAS79081.1| ribosomal protein S11 [Dictyota dichotoma]
Length = 138
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 16 IVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVA-TDDCSAK 73
I G V +T N I++ D + SS + +G K + +A+ A ++ + K
Sbjct: 5 IKKGLICVRTTKRNVLISLIDINEKKVKLSSSLGCLKGTGFDKRANYASVRAFSEIFTRK 64
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
Q G + + + + GLG R + + +R + I D T+ +HNGCRP K+RR
Sbjct: 65 IQELGYTDVSLMLRGLGVSRVALIHVIRDYNLKLNRITDETLSSHNGCRPSKQRR 119
>gi|207341973|gb|EDZ69881.1| YNL306Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 217
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKKKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ +V I D T + G R K RR+
Sbjct: 188 GASVVKKVVKISDATKLKFGGVRSPKMRRL 217
>gi|296424581|ref|XP_002841826.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638075|emb|CAZ86017.1| unnamed protein product [Tuber melanosporum]
Length = 214
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV S +N I T P+G+ I S VG G+ + S AA + G
Sbjct: 99 LHVYSPPHNCHIAYTRPNGDCIISKSTGNVGIKGAARGSFDAAFQLASHVLGEIAEMGAV 158
Query: 79 MSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ E+ + G GRD+ L+AL + +I + D T I G R R RR+
Sbjct: 159 PRNFELLLRDYGPGRDAFLKALMGREGQFLRGSIRMVIDSTRIKFGGTRSRALRRL 214
>gi|145640899|ref|ZP_01796481.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
gi|148827989|ref|YP_001292742.1| 30S ribosomal protein S11 [Haemophilus influenzae PittGG]
gi|262045156|ref|ZP_06018183.1| 30S ribosomal protein S11 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|145274413|gb|EDK14277.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.4-21]
gi|148719231|gb|ABR00359.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG]
gi|259037476|gb|EEW38720.1| 30S ribosomal protein S11 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 45
Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 85 KVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
V G G GR+S +RAL A GF I +I DVT I HNGCRP K+RR+
Sbjct: 1 MVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV 45
>gi|197129608|gb|ACH46106.1| putative mitochondrial ribosomal protein S11 variant 1 [Taeniopygia
guttata]
Length = 208
Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFA 62
++ R + + + AH+ +T+NNT I + + +S GF ++K + A
Sbjct: 60 RNSMRWDGKVYEEVP--IAHIKATYNNTHIQVVSFDNQPFSRTSCGTEGFQNAKKGTAIA 117
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGF 105
AQ A + KA+ G+ + V V GLG GR +A++ L GF
Sbjct: 118 AQTAAMAAAVKARGKGVLHVRVIVKGLGPGRKAAIKGLTMGGF 160
>gi|242767722|ref|XP_002341424.1| 37S ribosomal protein S11, putative [Talaromyces stipitatus ATCC
10500]
gi|218724620|gb|EED24037.1| 37S ribosomal protein S11, putative [Talaromyces stipitatus ATCC
10500]
Length = 257
Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG-- 78
HV + +NT IT+T P+GN + +GF S ++ A + A+ Q G
Sbjct: 122 LHVYAHKHNTIITLTRPNGNPLMSLGCGNIGFRKSHRSGYDPAYQLSSHVFAQIQEKGLL 181
Query: 79 --MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHN 119
++ + + G G GRD+ ++ L R + + + D T I
Sbjct: 182 PEITGISLVFRGFGMGRDAFIKVLLGNEGRNVRPLVTRVTDSTRIKFG 229
>gi|310771884|emb|CBH28883.1| 40S RIBOSOMAL PROTEIN S14 [Anncaliia algerae]
Length = 137
Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 19 GRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNH 77
G AH+++T N+T + ITD G TIA + + S ++SP AA +A D + KA +
Sbjct: 14 GVAHILATRNDTFVHITDLTGSETIAKITGGMKVKSHRDESSPXAAMLAATDAAEKAMSK 73
Query: 78 GMSSLEVKVSG--------LGAGRDSALRALRAI-GFTIVSICDVTMIA 117
G+++L +K+ G G G +A+RAL G + + DVT
Sbjct: 74 GINALHIKLRGRGGVKSPLPGPGAQAAIRALIRYPGMRLCRVEDVTPEP 122
>gi|226476060|emb|CAX72120.1| ribosomal protein S14 [Schistosoma japonicum]
Length = 117
Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 1 MPKSPSRIRNRERKNI-----------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPK 48
M + + + V G H+ ++FN+T + +TD G TI +
Sbjct: 1 MAAKRKGAKKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGG 60
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
+ + ++SP+AA +A D + K + G+++L +++ G
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVAEKCKALGINALHIRIRATG 102
>gi|50344490|emb|CAH04331.1| S14e ribosomal protein [Curculio glandium]
Length = 117
Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M +++ E + IV G AH+ ++FN+T + +TD G TI+ + +
Sbjct: 1 MAPRKGKVQKEEVQVSLGPQVREGEIVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALR 98
+ + SP+AA + D + K ++ G+++L +K+ GAG SALR
Sbjct: 61 KVKADRDEASPYAAMLHAQDVAEKCKSLGITALXIKLRATGGXKTKTPGAGAQSALR 117
>gi|170033070|ref|XP_001844402.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167873516|gb|EDS36899.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 152
Score = 77.2 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
IVSG AH+ ++FN+T + +TD G + + SR+ P+A D + K
Sbjct: 50 IVSGLAHIYASFNDTFVNVTDLSGKKTDLR--RHLSQGQSRRVLPYA----AQDVAEKFY 103
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCR 122
G+++L + + + + ALRA+ I I DVT I + R
Sbjct: 104 LLGITALRINL----SKEEMALRAMACSSMKIGRIEDVTSIPSDSTR 146
>gi|145932362|ref|YP_001165411.1| ribosomal protein S11 [Phytophthora sojae]
gi|110169605|gb|ABG54071.1| ribosomal protein S11 [Phytophthora sojae]
Length = 138
Score = 77.2 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ ++ NT I++T +GN + S K + + +KN+P+ Q+ + Q +
Sbjct: 30 IHITASLKNTIISLTKHNGNLLKQWSTKSLKKTRFKKNTPYNVQLIVYKINKYLQLKKIK 89
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
L++ + G G GR + L+ L+ F + + D T NGCR +K++R
Sbjct: 90 KLKIFLHGTGLGRYNVLKNLKQKNFKVKYLLDKTTKPFNGCRLKKQKR 137
>gi|14326099|gb|AAK60138.1|AF365405_1 ribosomal protein S14 [Schizosaccharomyces pombe]
Length = 139
Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T + ITD G TI + + + ++SP+AA +A D +AK
Sbjct: 13 ELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAK 72
Query: 74 AQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G +ALRAL G I I DVT I
Sbjct: 73 CKEVGITALHIKIRATGGTATKTPGPVSQAALRALARAGMRIGRIEDVTPIP 124
>gi|145932452|ref|YP_001165364.1| ribosomal protein S11 [Phytophthora ramorum]
gi|110169650|gb|ABG54115.1| ribosomal protein S11 [Phytophthora ramorum]
gi|188038013|gb|ACD46631.1| ribosomal protein S11 [Phytophthora ramorum]
Length = 139
Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ ++ NT I++T GN + S K + + +KN+P+ Q+ + Q +
Sbjct: 31 LHITASLKNTIISLTTHEGNLLKQWSTKALKKTRFKKNTPYNVQLIVYKINKYLQLKKIK 90
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
L++ + G G GR + L+ L+ F + + D T NGCR +K++R
Sbjct: 91 KLKIFLHGTGLGRYNVLKNLKQKNFKVKYLLDKTTKPFNGCRLKKQKR 138
>gi|238586962|ref|XP_002391331.1| hypothetical protein MPER_09260 [Moniliophthora perniciosa FA553]
gi|215455846|gb|EEB92261.1| hypothetical protein MPER_09260 [Moniliophthora perniciosa FA553]
Length = 129
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA---- 72
R H S +T +T T P+G+T+ W+S VG+ + S A
Sbjct: 8 PRYRLHCSSQRTSTIVTFTKPNGDTMTWNSGGSVGYKKHNRESFEAGYQCAVRTFKVIEE 67
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAI-----GFTIVSICDVTMIAHNGCRPRKRR 127
A+ G +E+ + G G GRD+ +AL+ I++I D T I G R +K +
Sbjct: 68 VAKKEGPFYIELYLKGFGMGRDAMEKALQLSEGEYVRPLIIAITDRTPIKIGGTRSQKPK 127
>gi|170033828|ref|XP_001844778.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167874855|gb|EDS38238.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 186
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
IVSG AH+ ++FN+T + ITD G + + SR+ P+A D + K
Sbjct: 42 IVSGLAHIYASFNDTFVNITDLSGKKTDLR--RHLSQGQSRRVLPYA----AQDVAEKFY 95
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI 116
G+++L + + + ALRA+ I I DVT +
Sbjct: 96 LLGITALRINL----PKEEMALRAMACSSMKIGRIEDVTGV 132
>gi|304314286|ref|YP_003849433.1| 30S ribosomal protein S11 [Methanothermobacter marburgensis str.
Marburg]
gi|302587745|gb|ADL58120.1| 30S ribosomal protein S11 [Methanothermobacter marburgensis str.
Marburg]
Length = 130
Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ G A++ S+FNNT ITITD G TI S V + +++SPFAA A +
Sbjct: 3 EKEKWGIANIYSSFNNTIITITDITGAETITQWSGGKVVRADRQESSPFAAMEAATRAAD 62
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
A+ G+ L +KV G G +A+RAL G I I DVT I H+
Sbjct: 63 DAKEKGIVGLHIKVRAPGGNGPRTPGPGAQAAIRALARAGMKIGKIEDVTPIPHD 117
>gi|242093936|ref|XP_002437458.1| hypothetical protein SORBIDRAFT_10g027450 [Sorghum bicolor]
gi|241915681|gb|EER88825.1| hypothetical protein SORBIDRAFT_10g027450 [Sorghum bicolor]
Length = 175
Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 31 RITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV---- 86
I++ G S + + ++SP+AA +A D + + G+++L +K+
Sbjct: 29 FISLICLGGKLWYHPSG-MKVKADRDESSPYAAMLAAQDVAQGCKELGITALHIKLRATG 87
Query: 87 ----SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G G SALRAL G I I DVT +
Sbjct: 88 GNKTKTPGPGAQSALRAL--SGMKIGRIEDVTPVP 120
>gi|302898258|ref|XP_003047811.1| hypothetical protein NECHADRAFT_85993 [Nectria haematococca mpVI
77-13-4]
gi|256728742|gb|EEU42098.1| hypothetical protein NECHADRAFT_85993 [Nectria haematococca mpVI
77-13-4]
Length = 152
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G A + ++FN+T + ITD G TIA + + + ++SP+AA +A D +AK
Sbjct: 26 ELVFGVARIFASFNDTFVHITDMSGRETIARVTGGMKVKADRDESSPYAAMLAAQDAAAK 85
Query: 74 AQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G G +ALRAL G I I DVT
Sbjct: 86 CKEKGINALHIKLRGTGGNGRMTPGPGGQAALRALARAGMKIGRIEDVTPTP 137
>gi|50553040|ref|XP_503930.1| YALI0E14124p [Yarrowia lipolytica]
gi|49649799|emb|CAG79523.1| YALI0E14124p [Yarrowia lipolytica]
Length = 206
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 46/144 (31%), Gaps = 28/144 (19%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPH---------------------GNTIAWSSPKVVGF 52
K +V HV +T NN I TD S +G
Sbjct: 63 KEVVRHYVHVTATKNNLHICATDEFVDKSFIPESIDEKLLQKVRAPQEVRFHISCGHLGI 122
Query: 53 SGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRD---SALRALRAIGF-- 105
+ A + + GM +EV V G G GR+ +AL A
Sbjct: 123 KKKERGEYDGAFQTSVRAFELLEKKGMLTRPVEVVVRGFGRGREGFFAALTAPEGEKVAS 182
Query: 106 TIVSICDVTMIAHNGCRPRKRRRI 129
+ + D T + G RP RRR+
Sbjct: 183 KVDRLSDRTKLNQGGTRPPGRRRV 206
>gi|157872891|ref|XP_001684969.1| 40S ribosomal protein S14 [Leishmania major]
gi|68128039|emb|CAJ06879.1| 40S ribosomal protein S14 [Leishmania major strain Friedlin]
Length = 203
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 1 MPKS---PSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSR 56
M K + N ++ ++V G H+ ++FN+T + +TD G T + + +
Sbjct: 10 MSKKQEVKAYGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRD 69
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGR 93
++SP+AA +A D A+ + G+++L VK+ +G R
Sbjct: 70 ESSPYAAMMAAQDVVARCKECGINALHVKMRAVGGVR 106
>gi|170062863|ref|XP_001866854.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167880619|gb|EDS44002.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 230
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
IVSG AH+ ++FN+T + +TD G + + SR+ P+A D + K
Sbjct: 112 IVSGLAHIYASFNDTFVNVTDLSGKKTDLR--RHLSQGQSRRVLPYA----AQDVAEKFY 165
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+++L + + + ALRA+ I I DVT I + R +
Sbjct: 166 LLGITALRINL----PKEEMALRAMACSWMKIGRIEDVTSIPSDSTRRK 210
>gi|146417857|ref|XP_001484896.1| hypothetical protein PGUG_02625 [Meyerozyma guilliermondii ATCC
6260]
Length = 228
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---- 79
T+N + + S +GF +++ AA + + + G+
Sbjct: 114 HLTYNEKVLYYMQLPHHVKLHVSAGQLGFRKAQRAEYEAAYQVSSRMFKQIEEKGLLGPN 173
Query: 80 SSLEVKVSGLGAGRDSALRALR-----AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+E+ + G GR++ L AL+ I IV I D T + G RP+K RR+
Sbjct: 174 DKVELVLKDFGRGREAFLAALQGKEGSRIRPNIVRISDNTKLRFGGSRPKKLRRL 228
>gi|190346439|gb|EDK38527.2| hypothetical protein PGUG_02625 [Meyerozyma guilliermondii ATCC
6260]
Length = 228
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---- 79
T+N + + S +GF +++ AA + + + G+
Sbjct: 114 HLTYNEKVLYYMQLPHHVKLHVSAGQLGFRKAQRAEYEAAYQVSSRMFKQIEEKGLLGPN 173
Query: 80 SSLEVKVSGLGAGRDSALRALR-----AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+E+ + G GR++ L AL+ I IV I D T + G RP+K RR+
Sbjct: 174 DKVELVLKDFGRGREAFLAALQGKEGSRIRPNIVRISDNTKLRFGGSRPKKLRRL 228
>gi|255717454|ref|XP_002555008.1| KLTH0F18920p [Lachancea thermotolerans]
gi|238936391|emb|CAR24571.1| KLTH0F18920p [Lachancea thermotolerans]
Length = 207
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 32/156 (20%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITIT----DPHG---------------------N 40
S+ + ++ V + + T NNT T + D +
Sbjct: 52 SKSSKKRGEHTVKYILNCLFTKNNTHFTYSAVVEDLNYLKNNADASYNDKFLYYLKLPQK 111
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSAL- 97
S +GF + + AA + + ++E+ + G GR++
Sbjct: 112 VKFRVSTGNLGFRKAARGEYEAAFQTSARLFQMIHQKKLLDRNIEIVLKDFGKGREAFTA 171
Query: 98 ----RALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ A+ +V + D T I G R ++RR+
Sbjct: 172 ALNGKEGTAVRRNVVRVSDATPIKFGGVRAPRQRRL 207
>gi|15678066|ref|NP_275180.1| 30S ribosomal protein S11P [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122790|sp|O26143|RS11_METTH RecName: Full=30S ribosomal protein S11P
gi|2621072|gb|AAB84544.1| ribosomal protein S14 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 130
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ G A++ S+FNNT ITITD G TI S V + +++SPFAA A +
Sbjct: 3 EKEKWGIANIYSSFNNTIITITDITGAETITQWSGGKVVRADRQESSPFAAMEAATRAAD 62
Query: 73 KAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTMIAHN 119
A+ G+ L +KV G G +A+RAL G I I DVT I H+
Sbjct: 63 DAKEKGIVGLHIKVRAPGGNGPRTPGPGAQAAIRALARAGMRIGKIEDVTPIPHD 117
>gi|260891351|ref|ZP_05902614.1| ribosomal protein S11 [Leptotrichia hofstadii F0254]
gi|260858734|gb|EEX73234.1| ribosomal protein S11 [Leptotrichia hofstadii F0254]
Length = 51
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
M +E+K+ G G+GR++++R+++A G + I D+T + HNG RP K+RR
Sbjct: 1 MKQIEIKIKGPGSGREASIRSIQATGLEVTRIVDITPVPHNGARPPKKRR 50
>gi|146304893|ref|YP_001192209.1| 30S ribosomal protein S11P [Metallosphaera sedula DSM 5348]
gi|172046963|sp|A4YIN3|RS11_METS5 RecName: Full=30S ribosomal protein S11P
gi|145703143|gb|ABP96285.1| SSU ribosomal protein S11P [Metallosphaera sedula DSM 5348]
Length = 132
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ I G A + ++ NNT ITITD G I+ +S ++ + K SP+AA +A +
Sbjct: 3 SKREIRWGLARIYASQNNTIITITDITGAEVISKASGGMMVKADREKPSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
++ A + G+ ++ +KV G G A+R+L GF I I DVT I H+
Sbjct: 63 ASDALDKGLMAIHIKVRAPGGAGPKTPGPGAQPAIRSLARSGFIIGRIEDVTPIPHD 119
>gi|170051217|ref|XP_001861665.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167872542|gb|EDS35925.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 232
Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 16 IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
IVSG AH+ ++FN+T + +TD + + SR+ P+A D + K
Sbjct: 114 IVSGLAHIYASFNDTFVNVTDLSDKKTDLR--RHLSQGQSRRVLPYA----AQDVAEKFY 167
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
G+++L + + + ALRA+ I I DVT I + R +
Sbjct: 168 LLGITALRINL----PKEEMALRAMACSSMKICRIEDVTSIPSDSTRRK 212
>gi|84508570|ref|YP_448618.1| ribosomal protein S11 [Fucus vesiculosus]
gi|39653293|gb|AAR29312.1| ribosomal protein S11 [Fucus vesiculosus]
Length = 179
Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 19 GRAHVVSTFNNTRITITDP-HGNTIAWSSPKVVGFSGS---RKNSPFAAQVATDDCSAKA 74
G ++ T N T+TD + S +V + R+N V +K
Sbjct: 56 GSIYINCTKRNIFCTLTDTLSKKVKSSCSLRVPNYKNEFNERENLYTRGLVLGKFFGSKV 115
Query: 75 QNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+ G + + +G GR LR+L G I S +T AHNGCRP K RR
Sbjct: 116 VSLGYKKILLYFTGSNKGRSGVLRSLSKTGIKIYSTVLITQKAHNGCRPAKNRR 169
>gi|225682774|gb|EEH21058.1| mitochondrial ribosomal protein subunit S18 [Paracoccidioides
brasiliensis Pb03]
Length = 1550
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
HV S +NT IT+T +G + S +GF ++++ AA K Q
Sbjct: 87 PPHHLHVYSHKHNTHITLTRSNGEPLLSMSCGNIGFRKAQRSKFDAAHQLASFMMGKIQE 146
Query: 77 HG----MSSLEVKVSGLGAGRDSALR 98
G M LEV + G G GR++ +
Sbjct: 147 EGHLLKMKRLEVVLRGFGPGREAFTK 172
>gi|269812145|gb|ACZ44443.1| ribosomal protein S11 [Pythium ultimum]
gi|269812174|gb|ACZ44472.1| ribosomal protein S11 [Pythium ultimum]
Length = 127
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
HV ++ NT I++T G + S K + + +KN+P+ Q+ + Q +
Sbjct: 19 LHVKASLKNTIISLTKNTGAVLKQWSTKSLKKTKFKKNTPYNVQLIIYKINQYIQLKKIK 78
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
L + ++G G GR + L+ ++ I I D T NGCR +K +R+
Sbjct: 79 KLNIHLNGTGLGRFNVLKNIKKKNIKIGYIFDKTSRPFNGCRIKKMKRL 127
>gi|299830455|ref|YP_003734826.1| ribosomal protein S11 [Pythium ultimum]
gi|299830484|ref|YP_003734855.1| ribosomal protein S11 [Pythium ultimum]
gi|269810832|gb|ACZ43861.1| ribosomal protein S11 [Pythium ultimum]
gi|269810861|gb|ACZ43890.1| ribosomal protein S11 [Pythium ultimum]
Length = 127
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
HV ++ NT I++T G + S K + + +KN+P+ Q+ + Q +
Sbjct: 19 LHVKASLKNTIISLTKNTGAVLKQWSTKSLKKTKFKKNTPYNVQLIIYKINQYIQLKKIK 78
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
L + ++G G GR + L+ ++ I I D T NGCR +K +R+
Sbjct: 79 KLNIHLNGTGLGRFNVLKNIKKKNIKIGYIFDKTSRPFNGCRIKKMKRL 127
>gi|9695399|ref|NP_037621.1| ribosomal protein S11 [Phytophthora infestans]
gi|6692651|gb|AAF24794.1|U17009_27 ribosomal protein S11 [Phytophthora infestans]
gi|58012157|gb|AAW62565.1| ribosomal protein S11 [Phytophthora infestans]
gi|58201996|gb|AAW67051.1| ribosomal protein S11 [Phytophthora infestans]
gi|58202043|gb|AAW67097.1| ribosomal protein S11 [Phytophthora infestans]
Length = 138
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ ++ NT I++T+ +GN + S K + + +KN+P+ Q+ + Q +
Sbjct: 31 LHITASLKNTIISLTNYNGNLLKQWSTKSLKKTRFKKNTPYNVQLIVYKINKYLQIKKIK 90
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
L+V + G G GR + L+ L+ F I + D T NGCR +K++R
Sbjct: 91 KLKVYLHGTGLGRYNVLKNLKK-NFKIRYLLDKTTKPFNGCRLKKKKR 137
>gi|45268983|gb|AAS55904.1| mitochondrial ribosomal protein S11 [Sus scrofa]
Length = 69
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 79 MSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ + V V GLG GR SA++ L G ++SI D T I HNGCRPRK RR+
Sbjct: 19 VTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL 69
>gi|82623421|gb|ABB87125.1| hypothetical protein [Solanum tuberosum]
Length = 99
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 42 IAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGR 93
+ + + + ++SP+AA +A D S + + G+++L +K+ G G
Sbjct: 1 MVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGA 60
Query: 94 DSALRALRAIGFTIVSICDVTMIA 117
SALRAL G I I DVT I
Sbjct: 61 QSALRALARSGMKIGRIEDVTPIP 84
>gi|21450007|ref|NP_659269.1| ribosomal protein S11 [Laminaria digitata]
gi|21425332|emb|CAC87965.1| ribosomal protein S11 [Laminaria digitata]
Length = 169
Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 9/125 (7%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSRKNSPFAAQ 64
+N+++K G + ST N T+ D + + S V R+N
Sbjct: 38 KNKDKK----GVILIKSTKRNVFCTLLDTNEKKVKTSCSLRVPAYENDYNERENLYTRGL 93
Query: 65 VATDDCSAKAQNHGMSSLEVKV-SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRP 123
+ + K G + + + SG+ GR +R L G I+ + T HNGCRP
Sbjct: 94 LLGNLFGDKVIELGYTEFTIYLGSGINKGRRGVVRGLSKKGVKIIFLHLGTRYPHNGCRP 153
Query: 124 RKRRR 128
K RR
Sbjct: 154 VKVRR 158
>gi|170585453|ref|XP_001897498.1| 30S ribosomal protein S11 [Brugia malayi]
gi|158595084|gb|EDP33658.1| 30S ribosomal protein S11, putative [Brugia malayi]
Length = 104
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 40 NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN-HGMSSLEVKVSGLGAGRDSALR 98
NT + GF GSRK++ + A A + G+ + + G G G ++A++
Sbjct: 14 NTRYQTFVGTHGFPGSRKSTTYGASKALQAAAKAGIEKFGVEVVSGIIRGPGFGTETAVK 73
Query: 99 ALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
AL++ G T+ SI + T I+HNG R RK+RR+
Sbjct: 74 ALQSCGLTVTSIANKTTISHNGSRLRKKRRV 104
>gi|517289|emb|CAA56479.1| ribosomal protein S11 [Sulfolobus acidocaldarius]
Length = 132
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G A + ++ NNT ITITD G I+ +S +V + K SP+AA +A +
Sbjct: 3 SRREIRWGNARIYASQNNTIITITDITGAEIISKASGGMVVKADREKPSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ A + G+S++ +KV G G A+RAL GF I I DVT + H+
Sbjct: 63 ANDAFDKGISAIHIKVRAQGGYGFQTPGPGAQPAIRALARAGFIIGRIEDVTPLPHD 119
>gi|255965775|gb|ACU45181.1| 40s ribosomal protein s14 [Prorocentrum minimum]
Length = 104
Score = 73.7 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAG 92
TI + + + ++SP+AA +A D +A+ + G+++L +K+ G G
Sbjct: 5 TIIRVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGTRTRTPGPG 64
Query: 93 RDSALRALRAIGFTIVSICDVTMIA 117
SALRAL G I I DVT I
Sbjct: 65 AQSALRALARSGMKIGRIEDVTPIP 89
>gi|313768498|ref|YP_004062174.1| ribosomal protein S11 [Gracilariophila oryzoides]
gi|312844625|gb|ADR03190.1| ribosomal protein S11 [Gracilariophila oryzoides]
Length = 119
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
+ NI S ++ T NN T+T+ G + W+S + G++K + + A
Sbjct: 3 KNNIKSVILVIIFTSNNILYTLTNIEGEVLFWTSAGLKRTRGTKKITLTTIVSSIKIILA 62
Query: 73 KAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
N + + +K G + L+ L+ I+SI + +M+ HNGC+ KRR I
Sbjct: 63 YLNNVKIKYIHLKFKGFDKNKKIVLKYLKQSTLNILSITNNSMLPHNGCKKTKRRCI 119
>gi|161528958|ref|YP_001582784.1| 30S ribosomal protein S11 [Nitrosopumilus maritimus SCM1]
gi|160340259|gb|ABX13346.1| ribosomal protein S11 [Nitrosopumilus maritimus SCM1]
Length = 108
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 34 ITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG---- 88
+TD G T++ SS + + ++SPFAA A + A+ G + ++V
Sbjct: 1 MTDLTGGETVSISSGGIHVNADRYESSPFAAMKAANQVVESAKTKGFTGFHIRVRAVGGV 60
Query: 89 ----LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G G +A+RAL GF I I DVT I H+
Sbjct: 61 GSRVPGPGAQAAIRALARGGFKIGRIDDVTPIPHD 95
>gi|70605932|ref|YP_254802.1| 30S ribosomal protein S11P [Sulfolobus acidocaldarius DSM 639]
gi|73920770|sp|P39469|RS11_SULAC RecName: Full=30S ribosomal protein S11P
gi|68566580|gb|AAY79509.1| 30S ribosomal protein S11P [Sulfolobus acidocaldarius DSM 639]
Length = 132
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
R+ I G A + ++ NNT ITITD G I+ +S +V + K SP+AA +A +
Sbjct: 3 SRREIRWGNARIYASQNNTIITITDITGAEIISKASGGMVVKADREKPSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+ A + G+S++ +KV G G A+RAL GF I I DVT + H+
Sbjct: 63 ANDAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPLPHD 119
>gi|9653245|ref|NP_062491.1| ribosomal protein S11 [Chondrus crispus]
gi|1351021|sp|P48941|RT11_CHOCR RecName: Full=Ribosomal protein S11, mitochondrial
gi|1334493|emb|CAA87615.1| ribosomal protein S11 [Chondrus crispus]
Length = 116
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ T NN T +GN I W+S V ++K + + + K+ N+
Sbjct: 9 VLSILFTPNNILYYATQLNGNIIFWTSSGVHKQKNTKKVTLISITTVINYIKYKSVNY-- 66
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++ G + ++ L+ I+SI D HNGC+ RK RRI
Sbjct: 67 KGIHIRTKGFSKNKKLVIKQLKQSTLNILSISDKISWPHNGCKKRKIRRI 116
>gi|330834008|ref|YP_004408736.1| 30S ribosomal protein S11P [Metallosphaera cuprina Ar-4]
gi|329566147|gb|AEB94252.1| 30S ribosomal protein S11P [Metallosphaera cuprina Ar-4]
Length = 132
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ I G A + ++ NNT ITITD G ++ +S ++ + K SP+AA +A +
Sbjct: 3 SKREIRWGLARIYASQNNTIITITDITGAEVVSKASGGMMVKADREKPSPYAAMLAANKA 62
Query: 71 SAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
+A+A + G+ ++ +KV G G A+R+L GF I I DVT I H+
Sbjct: 63 AAEALDKGLMAIHIKVRAPGGAGPKTPGPGAQPAIRSLARSGFIIGRIEDVTPIPHD 119
>gi|50421961|ref|XP_459541.1| DEHA2E05082p [Debaryomyces hansenii CBS767]
gi|49655209|emb|CAG87768.1| DEHA2E05082p [Debaryomyces hansenii]
Length = 218
Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---- 79
T+N+ + +T S +GF ++++ A + + +
Sbjct: 104 HLTYNDKVLYYLQLPHHTKVHVSAGQLGFRKAQRSEYEAGYQVSSRMFKLIEERNLLGPN 163
Query: 80 SSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
+E+ + G GR++ L AL+ + I+ I D T + G RP+K RR+
Sbjct: 164 DKIELILKDFGKGREAFLAALQGKEGSKVKPNIIRISDNTKLQFGGSRPKKLRRL 218
>gi|326507998|dbj|BAJ86742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAK 73
+ HV T +T+TD GN A +S + G + + +A + +
Sbjct: 148 RVKRDVLHVTLKGKKTFVTVTDVKGNRKAGASAGCLEDRKGRSRLARYAGEATGEHMGRV 207
Query: 74 AQNHGMSSLEVKVSG--LGAGRDSALRALR--------AIGFTIVSICDVTMIAHNGCRP 123
A G+ S+ VKV G + + I+ + DVT +AHNGCR
Sbjct: 208 ANKIGLKSVVVKVKGYSFFRKKKKVIMGFADGFRGERVRTPSPIMYVHDVTQLAHNGCRL 267
Query: 124 RKRRR 128
K+ R
Sbjct: 268 PKKVR 272
>gi|49147178|ref|YP_025771.1| ribosomal protein S11 [Pseudendoclonium akinetum]
gi|33439193|gb|AAQ18730.1| ribosomal protein S11 [Pseudendoclonium akinetum]
Length = 213
Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 4 SPSRIRNRERKNIVSG-----RAHVVSTFNNTRITITDPHG-NTIAWS-SPKVVGFSGSR 56
R++N+ + + + T NNT I++ G N WS S G R
Sbjct: 82 KAGRVKNKSVEALPKNTNLFCLISINRTKNNTHAIISNLFGENKTKWSISAGQFKLPGGR 141
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIG--FTIVSICDVT 114
+ + + ++ C KA + G + G R S +R R G +++ I D T
Sbjct: 142 RKTRLSQRMVYKSCLEKALSFGYKFTVIHCRGT---RGSKVRIFRFFGDSLSVLLIKDTT 198
Query: 115 MIAHNGCRPRKRRRI 129
AHNGCRP K RR+
Sbjct: 199 GAAHNGCRPPKVRRV 213
>gi|118576267|ref|YP_876010.1| ribosomal protein S11 [Cenarchaeum symbiosum A]
gi|118194788|gb|ABK77706.1| ribosomal protein S11 [Cenarchaeum symbiosum A]
Length = 108
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 34 ITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG---- 88
+TD G T++ SS V + ++SPFAA A + A+ G + ++V
Sbjct: 1 MTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAKGFTGFHIRVRAVGGV 60
Query: 89 ----LGAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G G +A+RAL GF I I DVT I H+
Sbjct: 61 GSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHD 95
>gi|321262042|ref|XP_003195740.1| hypothetical protein CGB_H3180W [Cryptococcus gattii WM276]
gi|317462214|gb|ADV23953.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 298
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV-VGFSGSRKNSPFAAQVAT----DDCS 71
+ H+ ST NN +T+TD G + F +++++ AA A + +
Sbjct: 170 PTHTLHIRSTRNNVLLTLTDGLGPLFGTVTGGTDRTFKNAQRSTYEAAAQAAIKMFERVA 229
Query: 72 AKAQNHGMS-----SLEVKVSG-LGAGRDSALRALRA-----IGFTIVSICDVTMIAHNG 120
++ M+ L + +G G+ R++ L I IV + D T + G
Sbjct: 230 EWSRETKMNKKHEPKLRISYNGLFGSAREAVTTTLAGPQGSDIRRLIVRVEDRTKVKIGG 289
Query: 121 CRPRKRRRI 129
R RK RR+
Sbjct: 290 VRARKPRRL 298
>gi|318087286|gb|ADV40235.1| putative mitochondrial ribosomal protein, S11 [Latrodectus
hesperus]
Length = 83
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTI 107
V GF ++K + AAQ S++ G + V + GLG GR ++++ L G I
Sbjct: 2 GVEGFKNTKKGTNIAAQATAITFSSRCLKKGYDQVRVVIKGLGPGRMASIKGLEMGGLNI 61
Query: 108 VSICDVTMIAHNGCRPRKRRRI 129
VSI D T G R RK+RR+
Sbjct: 62 VSITDSTPYVLGGPRARKQRRV 83
>gi|208318|gb|AAA72517.1| ribosomal protein S11 (rpsK) [synthetic construct]
Length = 56
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSR
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSR 56
>gi|255022692|ref|ZP_05294678.1| 30S ribosomal protein S11 [Listeria monocytogenes FSL J1-208]
Length = 72
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M + + + R +KNI SG AH+ STFNNT + ITD HGN +AWSS +GF GSRK++P
Sbjct: 1 MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAWSSAGSLGFKGSRKSTP 60
Query: 61 F 61
F
Sbjct: 61 F 61
>gi|326495540|dbj|BAJ85866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAK 73
+ HV T +T+TD GN A +S + G + + +A + +
Sbjct: 124 RVKRDVLHVTLKGKKTFVTVTDVKGNRKAGASAGCLEDRKGRSRLARYAGEATGEHMGRV 183
Query: 74 AQNHGMSSLEVKVSG--LGAGRDSALRALR--------AIGFTIVSICDVTMIAHNGCRP 123
A G+ S+ VKV G + + I+ + DVT +AHNGCR
Sbjct: 184 ASKIGLKSVVVKVKGYSFFRKKKKVIMGFADGFRGERVRTPSPIMYVHDVTQLAHNGCRL 243
Query: 124 RKRRR 128
K+ R
Sbjct: 244 PKKVR 248
>gi|302696999|ref|XP_003038178.1| hypothetical protein SCHCODRAFT_48921 [Schizophyllum commune H4-8]
gi|300111875|gb|EFJ03276.1| hypothetical protein SCHCODRAFT_48921 [Schizophyllum commune H4-8]
Length = 121
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 12/121 (9%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
H +F NT +T+T +G I + VGF S + + A +
Sbjct: 2 PRYILHCR-SFRNTIVTLTRENGEPIGSWTGGSVGFKRSGRKTYEAGYQCAVQSFKMMEA 60
Query: 77 H-----GMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKR 126
G+ +E+ ++G G GR + A I + + D T + G R +K
Sbjct: 61 QSQGHSGI-HIELNLAGFGKGRQAVQTAFLTAEGEKIRPHVKYVIDSTPLKIGGTRGKKP 119
Query: 127 R 127
R
Sbjct: 120 R 120
>gi|297516785|ref|ZP_06935171.1| 30S ribosomal protein S11 [Escherichia coli OP50]
Length = 52
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGF 52
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGF 52
>gi|268164053|ref|YP_003288818.1| ribosomal protein S11 [Saccharina angustata]
gi|262318363|dbj|BAI48683.1| ribosomal protein S11 [Saccharina angustata]
Length = 169
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSRKNSPFAAQVATDDCSAK 73
G + ST N T+ D + S V R+N + + K
Sbjct: 43 KGIIIIKSTKRNVFCTLLDIAEKKVKTSCSLRVPSYENEYNERENLYTRGLLLGNLFGDK 102
Query: 74 AQNHGMSSLEVKV-SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A G + + + SG+ GR +R L G I + T HNGCRP K RR
Sbjct: 103 AIRLGYTEFAIYLGSGINKGRRGVVRGLSKKGVKITFLHLGTRAPHNGCRPVKVRR 158
>gi|217035901|gb|ACJ74466.1| 40S ribosomal protein S14 [Ochlerotatus taeniorhynchus]
Length = 92
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + K ++ G+++L +K+ G G SALRAL
Sbjct: 1 MKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
+ I I DVT I
Sbjct: 61 ARLSMKIGRIEDVTPIP 77
>gi|145614778|ref|XP_366161.2| hypothetical protein MGG_10381 [Magnaporthe oryzae 70-15]
gi|145021663|gb|EDK05792.1| hypothetical protein MGG_10381 [Magnaporthe oryzae 70-15]
Length = 625
Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 26 TFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG----MSS 81
+NT +T+TDP+ + I S +GF S + +A K Q G ++
Sbjct: 28 HKHNTHVTVTDPNRDAIVSLSTGNLGFKKSGRKHYDSAYQLGALVIDKLQEKGLHNKINK 87
Query: 82 LEVKVSGLGAGRDSALRALRAI-----GFTIVSICDVTMIAHN 119
LEV + G GAGR++ + L IVS+ D T +
Sbjct: 88 LEVVLRGFGAGREAVTKVLMGNEGRLFRPKIVSVADSTRLKFG 130
>gi|260947546|ref|XP_002618070.1| hypothetical protein CLUG_01529 [Clavispora lusitaniae ATCC 42720]
gi|238847942|gb|EEQ37406.1| hypothetical protein CLUG_01529 [Clavispora lusitaniae ATCC 42720]
Length = 203
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS--- 80
++N + S ++GF + + A + + +
Sbjct: 89 HLSYNEKVLYYMQLPHQVKLHVSAGMLGFRKAHRAEYEAGYQVSSRLFKMIEEKKLFGPN 148
Query: 81 -SLEVKVSGLGAGRDSALRALR-----AIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+E+ + G GR++ AL+ + IV + D T + G R +K RR+
Sbjct: 149 DKVELILRDFGKGREAFTSALQGKEGANVRPHIVRVTDNTKLKFGGSRSKKLRRL 203
>gi|194755505|ref|XP_001960032.1| GF13166 [Drosophila ananassae]
gi|190621330|gb|EDV36854.1| GF13166 [Drosophila ananassae]
Length = 122
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRAL 100
+ + + SP+AA +A D + K + G+++L + + G G SALRAL
Sbjct: 1 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHITLRATGGNKTKTPEPGLQSALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
I I DVT I
Sbjct: 61 TRSSMKIGRIEDVTPIP 77
>gi|324531193|gb|ADY49140.1| 40S ribosomal protein S14 [Ascaris suum]
Length = 92
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + + + +++L +K+ G G SALRAL
Sbjct: 1 MKVKADRDEASPYAAMLAAQDVAERCKALSINALHIKLRATGGTKTKTPGPGAQSALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 61 ARSGIKIGRIEDVTPIP 77
>gi|268164092|ref|YP_003288869.1| ribosomal protein S11 [Saccharina coriacea]
gi|262318402|dbj|BAI48721.1| ribosomal protein S11 [Saccharina coriacea]
Length = 169
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSRKNSPFAAQVATDDCSAK 73
G + ST N T+ D + S V R+N + + K
Sbjct: 43 KGIIIIKSTKRNVFCTLMDTAEKKVKTSCSLRVPSYENEYNERENLYTRGLLLGNLFGDK 102
Query: 74 AQNHGMSSLEVKV-SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A G + + + SG+ GR +R L G I + T HNGCRP K RR
Sbjct: 103 AIRLGYTEFAIFLGSGINKGRRGVVRGLSKKGVKITFLHLGTRAPHNGCRPVKVRR 158
>gi|149246922|ref|XP_001527886.1| 40S ribosomal protein S14 [Lodderomyces elongisporus NRRL YB-4239]
gi|255730042|ref|XP_002549946.1| 40S ribosomal protein S14 [Candida tropicalis MYA-3404]
gi|146447840|gb|EDK42228.1| 40S ribosomal protein S14 [Lodderomyces elongisporus NRRL YB-4239]
gi|238878914|gb|EEQ42552.1| 40S ribosomal protein S14 [Candida albicans WO-1]
gi|240133015|gb|EER32572.1| 40S ribosomal protein S14 [Candida tropicalis MYA-3404]
Length = 92
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D +AK + G++++ +K+ G G SALRAL
Sbjct: 1 MKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 61 ARSGLRIGRIEDVTPVP 77
>gi|268053548|ref|YP_003288907.1| ribosomal protein S11 [Saccharina japonica]
gi|268053587|ref|YP_003288945.1| ribosomal protein S11 [Saccharina religiosa]
gi|268053626|ref|YP_003288983.1| ribosomal protein S11 [Saccharina ochotensis]
gi|268053665|ref|YP_003289060.1| ribosomal protein S11 [Saccharina diabolica]
gi|268053704|ref|YP_003289111.1| ribosomal protein S11 [Saccharina longipedalis]
gi|262318168|dbj|BAI48493.1| ribosomal protein S11 [Saccharina japonica]
gi|262318207|dbj|BAI48531.1| ribosomal protein S11 [Saccharina religiosa]
gi|262318246|dbj|BAI48569.1| ribosomal protein S11 [Saccharina ochotensis]
gi|262318285|dbj|BAI48607.1| ribosomal protein S11 [Saccharina diabolica]
gi|262318324|dbj|BAI48645.1| ribosomal protein S11 [Saccharina longipedalis]
Length = 169
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 18 SGRAHVVSTFNNTRITITDPHGNTIAWSSP----KVVGFSGSRKNSPFAAQVATDDCSAK 73
G + ST N T+ D + S V R+N + + K
Sbjct: 43 KGIIIIKSTKRNVFCTLMDTAEKKVKTSCSLRVPSYVNEYNERENLYTRGLLLGNLFGDK 102
Query: 74 AQNHGMSSLEVKV-SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
A G + + + SG+ GR +R L G I + T HNGCRP K RR
Sbjct: 103 AIRLGYTEFAIYLGSGINKGRRGVVRGLSKKGVKITFLYLGTRAPHNGCRPVKVRR 158
>gi|254579577|ref|XP_002495774.1| ZYRO0C02750p [Zygosaccharomyces rouxii]
gi|238938665|emb|CAR26841.1| ZYRO0C02750p [Zygosaccharomyces rouxii]
Length = 211
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)
Query: 26 TFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLE 83
++N + S +GF + + AA + Q+ + +E
Sbjct: 101 SYNEKFFYYLNLPRRVKFSLSTGCLGFRKAARGEYEAAFQTSAKVFQLIQDKKLMDKDIE 160
Query: 84 VKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + G GR + + AL + +V I D T + G R + RR+
Sbjct: 161 IVMKDFGKGRAAFISALNGKEGTQLRKNVVRISDKTALKFGGVRAPRVRRL 211
>gi|297810709|ref|XP_002873238.1| hypothetical protein ARALYDRAFT_325233 [Arabidopsis lyrata subsp.
lyrata]
gi|297319075|gb|EFH49497.1| hypothetical protein ARALYDRAFT_325233 [Arabidopsis lyrata subsp.
lyrata]
Length = 124
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 31 RITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
+ +TD G V + ++SP+AA +A D + + + G++++ VK+ G
Sbjct: 29 FLHVTDLSGRE--TLVRITVVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATG 86
Query: 91 AGRDSALRALRAIGFTIVSICDVTMIA 117
+ R+ +IG I DVT I
Sbjct: 87 GNKTKTPRSWCSIG----RIEDVTPIP 109
>gi|326559150|gb|ADZ95614.1| 40S ribosomal protein S14 [Nosema bombycis]
Length = 111
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 31 RITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG- 88
I +TD G TI + S + SP+AA +A D + + G+ + + + G
Sbjct: 1 MIHVTDVTGAETIYRKYGGMTVRSKRDEGSPYAAMMAAQDVAEAIKARGVKIIHILLRGA 60
Query: 89 -------LGAGRDSALRALRAIGFTIVSICDVTMI 116
LG G A+R+L G + I DVT I
Sbjct: 61 GGVKPKALGPGAQVAVRSLIRAGLQLGRIEDVTPI 95
>gi|313768553|ref|YP_004062227.1| ribosomal protein S11 [Plocamiocolax pulvinata]
gi|312844680|gb|ADR03243.1| ribosomal protein S11 [Plocamiocolax pulvinata]
Length = 115
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 14 KNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
K + S ++ N +TD GN + W+S ++ +RK P
Sbjct: 2 KKLKSIILIILFKPTNFFCIVTDLKGNVLFWTSSGILNSKSTRKFIPSTIVYTLKYIINL 61
Query: 74 AQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
H L +K+ G + S L+ + I+SICD+ HNGC+ RKR+RI
Sbjct: 62 L--HKYKYLRIKIKGFNKNQKSILKIFKNTFLNILSICDLKSFPHNGCKKRKRKRI 115
>gi|50261288|ref|YP_052896.1| ribosomal protein S11 [Saprolegnia ferax]
gi|48237601|gb|AAT40650.1| ribosomal protein S11 [Saprolegnia ferax]
Length = 125
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIA-WSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
++ NT +++T+ G WSS + S +KNSP+ + + +
Sbjct: 16 LYINCALKNTILSLTNEKGQLYKQWSSKSLKKTSNLKKNSPYNIHFISYKAKKFLISKKI 75
Query: 80 SSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
L++ + G G GR + ++ L + I+ I D T + NGCR K++R
Sbjct: 76 YCLKIFIKGRGPGRYNVIKNLISKKIKIIFIQDKTNLPFNGCRSPKQKR 124
>gi|170037629|ref|XP_001846659.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880870|gb|EDS44253.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 131
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 29/125 (23%)
Query: 7 RIRNRERKN----------IVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSR 56
+ + ++RKN IV G A+V ++FN+T + +TD G + + +
Sbjct: 17 KEKKQKRKNRLEEVQVPDDIVFGVAYVYASFNDTFVHVTDLFGKSRLIVTRLAL------ 70
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIV 108
VA K ++ G++SL +K+ G G S LRAL IV
Sbjct: 71 -----RCYVAALYVGGKCKSLGITSLHMKLRAAGGTCTKTPGPGAQSVLRALARSSMNIV 125
Query: 109 SICDV 113
I ++
Sbjct: 126 KIINI 130
>gi|156847033|ref|XP_001646402.1| hypothetical protein Kpol_2001p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156117078|gb|EDO18544.1| hypothetical protein Kpol_2001p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 92
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + ++SP+AA +A D + K + G++++ VK+ G G +ALRAL
Sbjct: 1 MKVKADRDESSPYAAMLAAQDVAVKCKEVGITAVHVKIRATGGTRSKTPGPGGQAALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT +
Sbjct: 61 ARSGLRIGRIEDVTPVP 77
>gi|58271386|ref|XP_572849.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114904|ref|XP_773750.1| hypothetical protein CNBH2030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256378|gb|EAL19103.1| hypothetical protein CNBH2030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229108|gb|AAW45542.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 298
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 16/129 (12%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKV-VGFSGSRKNSPFAAQVATDDCSAKAQ 75
+ H+ ST NN +T+TD G + F +++++ AA A +
Sbjct: 170 PTHTLHIRSTRNNVLLTLTDGLGPLFGTVTGGTDRTFKNAQRSTYEAAAQAAIKMFERVA 229
Query: 76 NHGMS---------SLEVKVSG-LGAGRDSALRALRA-----IGFTIVSICDVTMIAHNG 120
L + +G G+ R++ L I IV + D T + G
Sbjct: 230 EWSRETKTSKKHEPKLRISYNGLFGSAREAVTTTLAGPQGSDIRRLIVRVEDRTKVKIGG 289
Query: 121 CRPRKRRRI 129
R RK RR+
Sbjct: 290 VRARKPRRL 298
>gi|170040391|ref|XP_001847984.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
gi|167863942|gb|EDS27325.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
Length = 125
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +TD G T + + + + + S
Sbjct: 21 MASCKNKTRKEE--------FSLYASFNDTFVHVTDLSGKETTSRVTGNMNAKADRDEAS 72
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEV----KVSGLGAGRDSALRALRAIGFTIV 108
P+AA +A D + K ++ G++ L + G G S RAL V
Sbjct: 73 PYAALLAAQDVADKCKSLGIT-LRATGGNRTKTPGPGAQSTHRALSCSSKNFV 124
>gi|296089604|emb|CBI39423.3| unnamed protein product [Vitis vinifera]
Length = 155
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 52 FSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--AGRDSALRALR-------A 102
G K S +AA + A+N G+ S+ +KV G + A+ + +
Sbjct: 69 MKGGPKLSRYAADATAEHVGRLARNLGLKSVVMKVKGFTYFKKKKQAIMSWKEGFNSSRG 128
Query: 103 IGFTIVSICDVTMIAHNGCRPRKRRRI 129
I+ I D T HNGCR ++RR+
Sbjct: 129 DENPIMYIEDTTRRPHNGCRLPRKRRV 155
>gi|292559460|ref|YP_003540828.1| ribosomal protein S11 [Hartmannella vermiformis]
gi|290775713|gb|ADD62212.1| ribosomal protein S11 [Hartmannella vermiformis]
Length = 149
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
++ + T+T+ G + S +VGF GS++ A + + A+ +
Sbjct: 40 IYIRNNSKTLFFTLTNKSGQVLCAFSSGMVGFKGSKRLGTPAVDSLSRKVALFAKQLNLK 99
Query: 81 SLEVKVSGLGA-GRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
++ V + +A++ G + I + ++HNG R +K RRI
Sbjct: 100 TISVVIKVTNNLFNITAMKIFFDHGLRVAKIIERIPLSHNGQRFKKTRRI 149
>gi|67521646|ref|XP_658884.1| hypothetical protein AN1280.2 [Aspergillus nidulans FGSC A4]
gi|40746717|gb|EAA65873.1| hypothetical protein AN1280.2 [Aspergillus nidulans FGSC A4]
Length = 1453
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 1 MPKSPSRI--RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKN 58
M + R HV S +NT +T+T P+G+ + V+GF+ SR+
Sbjct: 1 MASELESVILRRPYSDQTPPHHIHVYSHRHNTILTLTRPNGSPLMSFGTGVLGFTKSRRG 60
Query: 59 SPFAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL 100
A T A+ Q G + ++E+ G GR + +AL
Sbjct: 61 GYDPAYQLTSHLFAQIQERGLLMDIKAIEIIFRGFHQGRTAFTKAL 106
>gi|159145764|gb|ABW90419.1| putative ribosomal protein S14 [Barentsia elongata]
Length = 100
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG--------AG 92
TIA + + + ++SP+A+ +A+ D + + + G+++L +K+ G G
Sbjct: 1 TIARVTGGMKVKADRDQSSPYASMLASQDVAERCKKIGITALHIKLRATGGTRTKTAGPG 60
Query: 93 RDSALRALRAIGFTIVSICDVTMIA 117
SA+RAL G I I DVT +
Sbjct: 61 AQSAIRALARSGMKIGRIEDVTPLP 85
>gi|317155792|ref|XP_001825375.2| VPS9 domain protein [Aspergillus oryzae RIB40]
Length = 1532
Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K P R HV S +NT +T+T P+GN + S +GF ++
Sbjct: 103 MIKQPYADR------APPHHLHVFSHKHNTILTLTRPNGNPLLSMSCGHLGFRKGHRSGY 156
Query: 61 FAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALR 98
A T + Q G ++ LE+ G G GR++ +
Sbjct: 157 DPAYQLTSHVFGQMQERGYLLDINRLEIVFRGFGLGREAFTK 198
>gi|324105265|gb|ADY18395.1| ribosomal protein rps14 [Glycera tridactyla]
Length = 87
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D + K +
Sbjct: 23 VFGVAHIFASFNDTFLHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKVK 82
Query: 76 NHGMS 80
G++
Sbjct: 83 TLGIT 87
>gi|32348716|gb|AAP76332.1| small subunit ribosomal protein [Ranunculus sp. Qiu 95024]
Length = 127
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
K +++ ++R + H++ NT +T+TD GN +S +GF G + S +
Sbjct: 15 SKEDKQLKRKKRYFV-----HLLLKKKNTFVTVTDARGNKKTGASAGCLGFKGRSRRSRY 69
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
AAQ + A+N GM S+ +KV G R
Sbjct: 70 AAQATAEHVGRSARNLGMKSVVIKVKGSTYFRK 102
>gi|170033880|ref|XP_001844804.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
gi|167874881|gb|EDS38264.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
Length = 105
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +TD G T + + + + + S
Sbjct: 1 MASCKNKTRKEE--------FSLYASFNDTFVHVTDLSGKETTSRVTGNMNAKADRDEAS 52
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEV---KVSGLGAGRDSALRALRAIGFTIV 108
P+AA +A D + K ++ G+ + G G S RAL V
Sbjct: 53 PYAALLAAQDVADKCKSLGIRLRATGGNRTKTPGPGAQSTHRALSCSSKNFV 104
>gi|170068332|ref|XP_001868825.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
gi|167864393|gb|EDS27776.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
Length = 125
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +TD G T + + + + + S
Sbjct: 21 MASCKNKTRKEE--------FSLYASFNDTFVHVTDLSGKETSSRVTGNMNAKADQDEAS 72
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEV----KVSGLGAGRDSALRALRAIGFTIV 108
P+AA +A D + K ++ G++ L + G G S RAL V
Sbjct: 73 PYAALLAAQDVADKCKSLGIT-LRATGGNRTKTPGPGAQSTHRALSCSSKNFV 124
>gi|50308565|ref|XP_454285.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643420|emb|CAG99372.1| KLLA0E07459p [Kluyveromyces lactis]
Length = 205
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 32/156 (20%)
Query: 6 SRIRNRERKNIVSGRAHVVSTFNNTRITIT----DPH---------------------GN 40
S + R + ++ + T NNT T + D +
Sbjct: 50 SNKKGRVDEAVIKYILNCRFTKNNTHFTYSAVMEDRNFLANNPQLSYNEKYLYYLKLPQQ 109
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALR 98
S +GF + + A+ + ++E+ + G GRD+ +
Sbjct: 110 VKFHLSTGHLGFRKAARGEYEASFQTATKLFETLYQKKLLDKNIEIVMRDFGKGRDAFIS 169
Query: 99 ALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
AL I I + D T + G + + RR+
Sbjct: 170 ALNGKEGNLIRRHISRVADATELKFGGVKAPRPRRL 205
>gi|50294207|ref|XP_449515.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528829|emb|CAG62491.1| unnamed protein product [Candida glabrata]
Length = 207
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALR 98
S +GF + + AA T + G+ +E+ + G GR + +
Sbjct: 112 VKFAISTGCLGFRKALRGEYEAAFQTTTKVFQMIKEKGLMDKDIEIIMDDFGKGRTAFIA 171
Query: 99 ALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
AL I + I D T + G R + RR+
Sbjct: 172 ALNGKEGNEIRRKVTRISDKTALKFGGVRSPRMRRL 207
>gi|200004037|ref|YP_002221372.1| ribosomal protein L11 [Blastocystis sp. DMP/02-328]
gi|198385461|gb|ACH86055.1| ribosomal protein S11 [Blastocystis sp. DMP/02-328]
Length = 178
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
++K ++ + ++ +T NN IT P I+ + GF G K + +A ++ ++
Sbjct: 46 QQKQLLVIKLYIKTTLNNMFITTVTPTQ--ISTKTLSAFGFKGKSKQTLYAYKMFAENNI 103
Query: 72 AKAQNHGMSS-----LEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
Q +++ + + L + L+ + I I D+T I +NGC
Sbjct: 104 QNLQQI-LNNYPNILINIYAKPLNTKLKTFLKLYKLHSIQISKIYDLTPIPYNGC 157
>gi|32487326|emb|CAE05901.1| OSJNBa0061C08.8 [Oryza sativa Japonica Group]
gi|57834095|emb|CAE04760.3| OSJNBa0079C19.1 [Oryza sativa Japonica Group]
Length = 446
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 36 DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDS 95
DP G + WSS GF SRK SP+A Q D G+ EV V G G+GRD+
Sbjct: 48 DPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDA 104
Query: 96 ALRALRAIG 104
ALRA+ G
Sbjct: 105 ALRAIAKSG 113
>gi|18767372|gb|AAL79338.1|AC099402_2 Putative RNA polymerase alpha subunit [Oryza sativa]
gi|21327372|gb|AAM48277.1|AC122148_30 Putative RNA polymerase alpha subunit [Oryza sativa Japonica Group]
gi|110288947|gb|ABB47310.2| DNA-directed RNA polymerase alpha chain, putative, expressed [Oryza
sativa Japonica Group]
Length = 446
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 36 DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDS 95
DP G + WSS GF SRK SP+A Q D G+ EV V G G+GRD+
Sbjct: 48 DPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDA 104
Query: 96 ALRALRAIG 104
ALRA+ G
Sbjct: 105 ALRAIAKSG 113
>gi|170035988|ref|XP_001845848.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
gi|167878447|gb|EDS41830.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
Length = 116
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+T + +TD G + + + VA K
Sbjct: 20 EIVFGVAYVYASFNDTFVHVTDLLGKSRLIVTRLAL-----------RCYVAALYVGGKC 68
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S LRAL IV I ++
Sbjct: 69 KSLGITSLHMKLRAAGGTCTKTPGPGAQSVLRALARSSMNIVKIINI 115
>gi|167527171|ref|XP_001747918.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773667|gb|EDQ87305.1| predicted protein [Monosiga brevicollis MX1]
Length = 249
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1 MPKSPSRIRNRE---RKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRK 57
M + R R + +++ S AHV T NNT +TI+ GN++ W+S GF G+R+
Sbjct: 136 MRQVSLRQRRKSAEREEDLESCLAHVKMTANNTIVTISRRDGNSLNWASAGSCGFKGARR 195
Query: 58 NSPFAAQVATDDCSA 72
++ +AAQVA+ +
Sbjct: 196 STTYAAQVASQRAAE 210
>gi|31442376|ref|NP_852633.1| ribosomal protein S11 [Eimeria tenella strain Penn State]
gi|31322468|gb|AAO40234.1| ribosomal protein S11 [Eimeria tenella]
Length = 132
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 22 HVVSTFNNTRITI-----------TDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDC 70
++ ST +NT I+I P+ I S GF +K +PFA + +
Sbjct: 17 YIKSTGHNTFISIFKETILIKNNKVKPNQKLIKIFSCGSFGFKNRKKETPFACSILANKS 76
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRA-----LRAIGFTIVSICDVTMIAHNG 120
S A +G + + G+ + L + I I+SI DVT HNG
Sbjct: 77 SLYALQNGAKYIHIIFKGINIFKKIILTTIIKTKYKNINLQILSITDVTQYPHNG 131
>gi|170058452|ref|XP_001864928.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167877560|gb|EDS40943.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 124
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+T + +TD G + + + VA K
Sbjct: 28 EIVFGVAYVYASFNDTFVHVTDFLGKSRLIVTRLAL-----------RCYVAALYVGGKC 76
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S LRAL IV I ++
Sbjct: 77 KSLGITSLHMKLRAAGGTCTKTPGPGAQSVLRALARSSMNIVKIINI 123
>gi|170029234|ref|XP_001842498.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
gi|167881601|gb|EDS44984.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
Length = 125
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +TD G T + + + + + S
Sbjct: 21 MASCKNKTRKEE--------FSLYASFNDTFVHVTDLSGKETTSRVTGNMNAKADRDEAS 72
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEV----KVSGLGAGRDSALRALRAIGFTIV 108
P+AA +A D + K ++ G++ L + G G S R L V
Sbjct: 73 PYAALLAAQDVADKCKSLGIT-LRATGGNRTKNPGPGAQSTHRDLSCSSKNFV 124
>gi|156837257|ref|XP_001642658.1| hypothetical protein Kpol_1076p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156113214|gb|EDO14800.1| hypothetical protein Kpol_1076p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 219
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 7/112 (6%)
Query: 25 STFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSL 82
S +N + S +GF + + AA + Q + ++
Sbjct: 108 SKYNEAFLYYMKLPQKVKFNISTGCLGFRKAARGEYEAAFQTSAKAFQMIQEKNLLDKNI 167
Query: 83 EVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
E+ + G GR + + AL + + I D T + G R + RR+
Sbjct: 168 EIVMKDFGKGRAAFIAALTGKEGNGVRSNVTRISDKTALKFGGVRSPRVRRL 219
>gi|27363138|gb|AAO11522.1| ribosomal protein S14 [Chlamys farreri]
Length = 70
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+E +N+ G AH+ ++FN+T + +TD G TIA + + + + SP+AA +A D
Sbjct: 6 KEGENV-FGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQD 64
Query: 70 CSAKAQ 75
+ + +
Sbjct: 65 VAERCK 70
>gi|170056617|ref|XP_001864110.1| 40S ribosomal protein [Culex quinquefasciatus]
gi|167876207|gb|EDS39590.1| 40S ribosomal protein [Culex quinquefasciatus]
Length = 112
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+T + +TD G + + + VA K
Sbjct: 16 EIVFGVAYVYASFNDTFVHVTDLLGKSRLIVTRLAL-----------RCYVAALYVGGKC 64
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S LRAL IV I ++
Sbjct: 65 KSLGITSLHMKLRAAGGTCTKTPGPGAQSVLRALARSSMNIVKIINI 111
>gi|114658732|ref|XP_001164547.1| PREDICTED: mitochondrial ribosomal protein S11 isoform 1 [Pan
troglodytes]
Length = 171
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
P S +R +K AH+ ++ NNT+I + +A++S GF ++K +
Sbjct: 67 PGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGI 126
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGR 93
AAQ A +A+A+ G+ + V V GLG GR
Sbjct: 127 AAQTAGIAAAARAKQKGVIHIRVVVKGLGPGR 158
>gi|19115715|ref|NP_594803.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
pombe 972h-]
gi|3183366|sp|O13882|YE1I_SCHPO RecName: Full=Uncharacterized protein C1B3.18c
gi|2330752|emb|CAB11244.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
pombe]
Length = 223
Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA--KAQNHG 78
H NNT IT+ P I +S GF ++ AA + + G
Sbjct: 108 LHAKCLKNNTHITLCSPERKIIFRASGGTCGFRKGKRRGYDAAYTICSKVLEQIQVKRLG 167
Query: 79 MSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAH 118
+ +L V G R++ L I IV + D T I
Sbjct: 168 IENLHVIFHGFSQAREAVQNCLLGQEGAVIRDKIVKVMDRTPIKF 212
>gi|302659393|ref|XP_003021387.1| hypothetical protein TRV_04461 [Trichophyton verrucosum HKI 0517]
gi|291185284|gb|EFE40769.1| hypothetical protein TRV_04461 [Trichophyton verrucosum HKI 0517]
Length = 114
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 30/99 (30%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV---------------------- 86
+ + ++SP+AA +A D +A+ + G+++L +K+
Sbjct: 1 MKVKADRDESSPYAAMLAAQDVAARCKELGINALHIKIRATGGTYSNISTQSWQADVQIL 60
Query: 87 --------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G G SALRAL G I I DVT
Sbjct: 61 TLFTGNGTKTPGPGAQSALRALARSGMRIGRIEDVTPTP 99
>gi|300702157|ref|XP_002995118.1| hypothetical protein NCER_102114 [Nosema ceranae BRL01]
gi|239603923|gb|EEQ81447.1| hypothetical protein NCER_102114 [Nosema ceranae BRL01]
Length = 105
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAG 92
TI S + S + SP+AA +A + +A G+ ++ + G LGAG
Sbjct: 6 TICRISGGMRVKSKRDEGSPYAAMIAAQEVAAIIAKKGVKTVHFMLRGAGGVKPKALGAG 65
Query: 93 RDSALRALRAIGFTIVSICDVTMIAHNGCRPR---KRRRI 129
A+R++ G + I DVT I + R + + RR+
Sbjct: 66 AQVAVRSIIRSGINMGRIEDVTPIPTDRVRMKGGHRGRRV 105
>gi|331250007|ref|XP_003337616.1| hypothetical protein PGTG_19436 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316606|gb|EFP93197.1| hypothetical protein PGTG_19436 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 271
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 44/151 (29%)
Query: 23 VVSTFNNTRITIT---------------------DPHGNTIAWSSPKVVGFSGSRKNSPF 61
V ST NNTR+T+T G +A + VGF R+
Sbjct: 121 VHSTPNNTRLTLTHTPVAYLPGSSPGHAGFKNAYPLAGAVVARVTAGSVGFKRGRRQEYE 180
Query: 62 AAQVA-----------------TDDCSAKAQNHGM-SSLEVKVSGLGAGRDSALRALRAI 103
AA A + A G+ LE+ +G G GRD+ L +L
Sbjct: 181 AATQACLAMFAKIRELIKLPTVARVNANPAVREGVPRELELVFNGFGIGRDAFLASLLNS 240
Query: 104 -----GFTIVSICDVTMIAHNGCRPRKRRRI 129
+ S+ D T++ G RP+KRRR+
Sbjct: 241 QATDLRELVRSLRDSTVVKIGGPRPKKRRRV 271
>gi|238683721|gb|ACR54139.1| ribosomal protein S14 [Palaemonetes varians]
Length = 82
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 42 IAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGR 93
I + + ++SP+AA +A D + K + G+++L VK+ G G
Sbjct: 1 IIRVTGGQKVKADRDESSPYAAMLAAQDVAEKCKTLGINALHVKIRATGGNKTKTPGPGG 60
Query: 94 DSALRALRAIGFTIVSICDVTM 115
SALRAL G I I DVT
Sbjct: 61 QSALRALARAGMKIGRIEDVTP 82
>gi|126137145|ref|XP_001385096.1| hypothetical protein PICST_60529 [Scheffersomyces stipitis CBS
6054]
gi|126092318|gb|ABN67067.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 154
Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---- 79
++N + +T + +GF S+++ AA + +
Sbjct: 40 HLSYNEKVLYYLQLPHHTKLHITAGQLGFRKSQRSEYEAAFQVATKMFKTIEEKNLLGPN 99
Query: 80 SSLEVKVSGLGAGR---DSALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
+E+ ++ G GR +AL IV + D T + G RP+K RR+
Sbjct: 100 DKIELIMTDYGKGRDAFQAALMGKEGQHIKPHIVRVSDATKLRFGGPRPKKLRRL 154
>gi|15150735|ref|NP_150401.1| ribosomal protein S11 [Pylaiella littoralis]
gi|15147741|emb|CAC50842.1| ribosomal protein S11 [Pylaiella littoralis]
Length = 154
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 5/115 (4%)
Query: 19 GRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSRKNSPFAAQVATDDCSAKA 74
G V ST N T+ D + S V R + + K
Sbjct: 31 GNVFVKSTNKNIFCTLLDFKDKKVKTSCSLRVPEYKNEFNERVSLFKRGVLLGQLFGDKI 90
Query: 75 QNHGMSSLEVKVS-GLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
G + + + + G+ R ++ + I I + HNGCRP K RR
Sbjct: 91 IELGYTEVYIYLDYGINKARKGVVKGIGEKKIKISFIRLIKGYPHNGCRPAKLRR 145
>gi|70938201|ref|XP_739806.1| 40S ribosomal subunit protein S14 [Plasmodium chabaudi chabaudi]
gi|56517074|emb|CAH76792.1| 40S ribosomal subunit protein S14, putative [Plasmodium chabaudi
chabaudi]
Length = 87
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAK 73
+V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A D +A+
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMAAQDVAAR 84
Query: 74 AQN 76
+
Sbjct: 85 LKE 87
>gi|170043631|ref|XP_001849483.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
gi|167866984|gb|EDS30367.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
Length = 111
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 24 VSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSL 82
++FN+T + +TD G T + + + + + SP+AA +A D + K ++ G++ L
Sbjct: 22 YASFNDTFVHVTDFSGKETTSRVTGNMNAKADRDEASPYAALLAAQDVADKCKSLGIT-L 80
Query: 83 EV----KVSGLGAGRDSALRALRAIGFTIV 108
+ G G S RAL V
Sbjct: 81 RATGGNRTKTPGPGAQSTHRALSCSSKNFV 110
>gi|326482395|gb|EGE06405.1| VPS9 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1411
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 46 SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHG----MSSLEVKVSGLGAGRDSALRAL- 100
+ +GF + AA K Q G ++ LEV + G G GR++ + L
Sbjct: 58 TTGNIGFRKGHRGDYDAAHQLAVYVMGKIQERGFLMQINGLEVILRGFGPGREAFTKVLL 117
Query: 101 ----RAIGFTIVSICDVTMIAHNGCRPR 124
+ + IV + D T + G R
Sbjct: 118 GKEGKVLRERIVRVSDSTRLKFGGTRSP 145
>gi|241956508|ref|XP_002420974.1| conserved hypothetical protein; ribosomal protein, small subunit,
mitochondrial precursor, putative [Candida dubliniensis
CD36]
gi|223644317|emb|CAX41130.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 215
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 35/164 (21%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITIT------------------------ 35
M + ++ +N+ + +V + + +NTR T+
Sbjct: 52 MSQLAQKLNKNKTNEKVVYWKLYATFNRHNTRCTLVAVVEDLDFMEKNKDLPYNDKVLYY 111
Query: 36 -DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM----SSLEVKVSGLG 90
+ +GF S++ A + + +E+ + G
Sbjct: 112 LQLPHKVKYSVTAGQLGFRKSQRQEYEAGFQVSSKMFKTIEERNYIGPHDKIELILKNFG 171
Query: 91 AGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
GR++ AL IV + D T++ G RP+K RR+
Sbjct: 172 KGREAFQAALLGKEGSKIKNNIVRVSDATVLKFGGDRPKKLRRL 215
>gi|530485|emb|CAA83834.1| 30S ribosomal protein [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 80
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
AH+ STFNNT +T++D GN ++WSS +GF GS+K++P+A + A
Sbjct: 13 AHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKKSTPYATPINFRSSXKGA 66
>gi|5441523|emb|CAB46816.1| Ribosomal protein S14 [Canis lupus familiaris]
Length = 79
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
AA +A D + + + G+++L +K+ G G SALRAL G I I DV
Sbjct: 1 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDV 60
Query: 114 TMIA 117
T I
Sbjct: 61 TPIP 64
>gi|32348724|gb|AAP76336.1| small subunit ribosomal protein [Achlys triphylla]
Length = 134
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ +++ + RK H+ NNT +T+TD GN +S + F G + S
Sbjct: 15 SEEDEQLKRKRRK---KDLVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSR 71
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 72 YAAEATAEHVGRSARNLGMKSVVMKVKGYTYFRK 105
>gi|32348722|gb|AAP76335.1| small subunit ribosomal protein [Caulophyllum thalictroides]
Length = 134
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVAT 67
R +++K+ H+ NNT +T+TD GN +S + F G + S +AA+
Sbjct: 23 RKKKKKDF----VHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEATA 78
Query: 68 DDCSAKAQNHGMSSLEVKVSG--LGAGRDSALRALR 101
+ A+N GM S+ +KV G + + + + R
Sbjct: 79 EHVGRSARNLGMKSVVMKVKGSTYFKKKKAVILSWR 114
>gi|32348738|gb|AAP76343.1| small subunit ribosomal protein [Ranzania japonica]
Length = 134
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 4 SPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFA 62
+++ +++ + H++ NNT +T+TD GN +S + F G + S +A
Sbjct: 19 EQLKLKRKKKYFV-----HLLPIHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYA 73
Query: 63 AQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
A+ + A+N GM S+ +KV G R
Sbjct: 74 AEATAEHVGRSARNLGMKSVVMKVKGSTYFRK 105
>gi|170059261|ref|XP_001865286.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
gi|167878114|gb|EDS41497.1| 40S ribosomal protein S14-B [Culex quinquefasciatus]
Length = 122
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+T + +TD G + + + VA K
Sbjct: 26 EIVFGVAYVYASFNDTFVHVTDLLGKSRLIVTRLAL-----------RCYVAALYVGGKC 74
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S L AL IV I ++
Sbjct: 75 KSLGITSLHMKLRAAGGTCTKTPGPGAQSGLGALARSSMNIVKIINI 121
>gi|238883165|gb|EEQ46803.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 215
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 35/164 (21%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITIT------------------------ 35
M + ++ +N+ + +V + + +NTR T+
Sbjct: 52 MSQLAQKLNKNKTNEKVVYWKLYATFNRHNTRCTLVAVVEDLDFMEKNKDLPYNDKVLYY 111
Query: 36 -DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM----SSLEVKVSGLG 90
+ +GF S++ A + + +E+ + G
Sbjct: 112 LQLPHKVKYSVTAGQLGFRKSQRQEYEAGFQVSSKMFKTIEERNYIGPHDKIELILKNFG 171
Query: 91 AGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
GR++ AL IV +CD T++ G RP+K RR+
Sbjct: 172 KGREAFQAALLGKEGSKIKNNIVRVCDATVLKFGGDRPKKLRRL 215
>gi|260426261|ref|ZP_05780240.1| ribosomal protein S11 [Citreicella sp. SE45]
gi|260420753|gb|EEX14004.1| ribosomal protein S11 [Citreicella sp. SE45]
Length = 93
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNS 59
M + R + + KNI +G AHV S+FNNT+I I+D GN I+WSS +GF GSR
Sbjct: 1 MARDTRRGGKKKVSKNIAAGVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSRNRP 60
Query: 60 P 60
P
Sbjct: 61 P 61
>gi|68484503|ref|XP_713862.1| likely mitochondrial ribosome protein S18 (E. coli S11) [Candida
albicans SC5314]
gi|46435378|gb|EAK94761.1| likely mitochondrial ribosome protein S18 (E. coli S11) [Candida
albicans SC5314]
Length = 215
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 35/164 (21%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITIT------------------------ 35
M + ++ +N+ + +V + + +NTR T+
Sbjct: 52 MSQLAQKLNKNKTNEKVVYWKLYATFNRHNTRCTLVAVVEDLDFMEKNKDLPYNDKVLYY 111
Query: 36 -DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM----SSLEVKVSGLG 90
+ +GF S++ A + + +E+ + G
Sbjct: 112 LQLPHKVKYSVTAGQLGFRKSQRQEYEAGFQVSSKMFKTIEERNYIGPHDKIELILKNFG 171
Query: 91 AGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
GR++ AL IV +CD T++ G RP+K RR+
Sbjct: 172 KGREAFQAALLGKEGSKIKNNIVRVCDATVLKFGGDRPKKLRRL 215
>gi|68484580|ref|XP_713821.1| likely mitochondrial ribosome protein S18 (E. coli S11) [Candida
albicans SC5314]
gi|46435335|gb|EAK94719.1| likely mitochondrial ribosome protein S18 (E. coli S11) [Candida
albicans SC5314]
Length = 215
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 35/164 (21%)
Query: 1 MPKSPSRI-RNRERKNIVSGRAHVVSTFNNTRITIT------------------------ 35
M + ++ +N+ + +V + + +NTR T+
Sbjct: 52 MSQLAQKLNKNKTNEKVVYWKLYATFNRHNTRCTLVAVVEDLDFMEKNKDLPYNDKVLYY 111
Query: 36 -DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM----SSLEVKVSGLG 90
+ +GF S++ A + + +E+ + G
Sbjct: 112 LQLPHKVKYSVTAGQLGFRKSQRQEYEAGFQVSSKMFKTIEERNYIGPHDKIELILKNFG 171
Query: 91 AGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
GR++ AL IV +CD T++ G RP+K RR+
Sbjct: 172 KGREAFQAALLGKEGSKIKNNIVRVCDATVLKFGGDRPKKLRRL 215
>gi|170035822|ref|XP_001845766.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167878203|gb|EDS41586.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 114
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 24 VSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSL 82
++FN+T + TD G T + + + + + SP+AA +A D + K ++ G++ L
Sbjct: 25 YASFNDTFVHATDLSGKETTSRVTGNMNAKADRDEASPYAALLAAQDVADKCKSLGIT-L 83
Query: 83 EV----KVSGLGAGRDSALRALRAIGFTIV 108
+ G G S RAL V
Sbjct: 84 RATGGNRTKTPGPGAQSTHRALSCSSKNFV 113
>gi|170060548|ref|XP_001865852.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
gi|167878966|gb|EDS42349.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
Length = 125
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +T T + + + + + S
Sbjct: 21 MASCKNKTRKEE--------FSLYASFNDTFVHVTGLSSKETTSRVTGNMNTKADRDEAS 72
Query: 60 PFAAQVATDDCSAKAQNHGMSSLEV---KVSGLGAGRDSALRALRAIGFTIV 108
P+AA +A D + K ++ G++ + G G S RAL V
Sbjct: 73 PYAAWLAAQDVADKCKSLGITLRATGGNRTKTPGPGVQSTHRALSCSSKNFV 124
>gi|32348754|gb|AAP76351.1| small subunit ribosomal protein [Cocculus carolinus]
Length = 148
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ ++ + + + H NNT +T+TD GN +S + F G + S
Sbjct: 31 SEEDEQLERKNKDFVHLPPIH-----NNTFVTVTDARGNQKTGASAGCLEEFKGGSRLSR 85
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+ GM S+ +KV G R
Sbjct: 86 YAAEATAEHVGRSARKMGMKSVVMKVKGSTYFRK 119
>gi|301500893|ref|YP_003795305.1| ribosomal protein S11 [Chromera velia]
gi|300069439|gb|ADJ66547.1| ribosomal protein S11 [Chromera velia]
Length = 563
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 46 SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALR-----AL 100
+ ++ G R+++PFAA+ T + H + V G+ A R +R +
Sbjct: 475 TAGMLRLVGKRRSTPFAAREITSKAIRYIRKHDFVYVRVFFRGVSANRTYIIRTLFSTSY 534
Query: 101 RAIGFTIVSICDVTMIAHNGCRPRKRRR 128
I+S+ D+T +NGCRP+K RR
Sbjct: 535 FGSALKILSLADITSAPYNGCRPKKYRR 562
>gi|238013020|gb|ACR37545.1| unknown [Zea mays]
Length = 100
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQ 75
V G AH+ ++FN+T I +TD G T+ + + + ++SP+AA +A+ D + + +
Sbjct: 27 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCK 86
>gi|32348766|gb|AAP76357.1| small subunit ribosomal protein [Hydrastis canadensis]
Length = 132
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H++ NNT +T+TD GN +S + F G + S +AA+ + A+N GM
Sbjct: 29 VHLLPIHNNTFVTVTDAKGNKKTGASAGCLEEFKGGSRLSRYAAEATAEHVGRSARNLGM 88
Query: 80 SSLEVKVSGLGAGRD 94
S+ +KV G R
Sbjct: 89 KSVVMKVKGSTYFRK 103
>gi|32348726|gb|AAP76337.1| small subunit ribosomal protein [Diphylleia grayi]
Length = 134
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVAT 67
+ ERK I H+ NNT +T+TD GN +S + F + S +AA+
Sbjct: 19 KQLERKRIKKDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKRGSRLSRYAAEATA 78
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+ A N GM S+ +KV G R
Sbjct: 79 EHVGRSAINMGMKSVVMKVKGSTYFRK 105
>gi|32348736|gb|AAP76342.1| small subunit ribosomal protein [Lonicera sp. Bergthorsson 0301]
Length = 147
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVAT 67
R R+RK+ H+ N T +T+TD GN +S +G F G + S +AA+
Sbjct: 36 RKRKRKDF----VHLPPIHNKTFVTVTDARGNQKTGASAGCLGEFKGGSRLSRYAAEATA 91
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+ A N GM + +KV G R
Sbjct: 92 EHVGRSAINLGMKPVVMKVKGSTYFRK 118
>gi|255727340|ref|XP_002548596.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134520|gb|EER34075.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 218
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 27 FNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM----SSL 82
+N+ + + +GF S++ AA + + + +
Sbjct: 107 YNDQVLYYLQLPHKVKYSITAGNLGFRKSQRQEYEAAFQVSSKMFKTIEERNLIGPHDKI 166
Query: 83 EVKVSGLGAGRDS---ALRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
E+ + G GR++ AL IV I D T++ G RP+K RR+
Sbjct: 167 ELVLKNFGKGREAFQAALLGKEGSKIKNNIVRISDATVLRFGGNRPKKLRRL 218
>gi|32348742|gb|AAP76345.1| small subunit ribosomal protein [Akebia quinata]
Length = 148
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ ++ +++ + H NNT +T+TD GN +S + F G + S
Sbjct: 31 SEEDEQLERKKKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEFKGGSRLSR 85
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 86 YAAKATAEHVGRSARNLGMKSVVMKVKGSTYFRK 119
>gi|32348752|gb|AAP76350.1| small subunit ribosomal protein [Cissampelos pareira]
Length = 148
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
++ ++ + + + H NNT +T+TD GN +S + F G + S
Sbjct: 31 SENDEQLERKNKDFVHLPPIH-----NNTFVTVTDARGNQKTGASAGCLEEFKGGSRLSR 85
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+ GM S+ +KV G R
Sbjct: 86 YAAEATAEHVGRSARKMGMKSVVMKVKGSTYFRK 119
>gi|170062872|ref|XP_001866858.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
gi|167880623|gb|EDS44006.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
Length = 116
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+T + +TD G + + + VA K
Sbjct: 20 EIVFGVAYVYASFNDTFVHVTDLLGKSRLIVTRLAL-----------RCYVAALYVGGKC 68
Query: 75 QNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S LRAL +IV I ++
Sbjct: 69 KSLGITSLHMKLRAAGGTCTKTPRPGAQSVLRALARSSMSIVKIINI 115
>gi|170055883|ref|XP_001863781.1| 40S ribosomal protein S14-2 [Culex quinquefasciatus]
gi|167875749|gb|EDS39132.1| 40S ribosomal protein S14-2 [Culex quinquefasciatus]
Length = 120
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G +V ++FN+T + +TD G + V + VA K
Sbjct: 20 EIVCGVTYVYASFNDTFVHVTDLLGKQLVEHRLIVTRLALR-------CYVAALYVGGKC 72
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSI 110
++ G+++L +K+ G G SALRAL IV I
Sbjct: 73 KSLGITALHMKLRAAGENCTKTPGPGAQSALRALARSSMNIVKI 116
>gi|32348740|gb|AAP76344.1| small subunit ribosomal protein [Berberis thunbergii]
Length = 150
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H++ NNT +T+TD GN +S + F G + S +AA+ + A+N GM
Sbjct: 47 VHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLGM 106
Query: 80 SSLEVKVSG--LGAGRDSALRALR 101
S+ +KV G + + + + R
Sbjct: 107 KSVVMKVKGSTYFKKKKAVILSWR 130
>gi|32348744|gb|AAP76346.1| small subunit ribosomal protein [Stylophorum diphyllum]
Length = 132
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
K ++ + + + H NNT +T+TD GN +S + G + S
Sbjct: 15 SKEDEQLERKNKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 70 YAAEATAEHVGRSARNLGMKSVVMKVKGSTYFRK 103
>gi|32348728|gb|AAP76338.1| small subunit ribosomal protein [Symphoricarpos albus]
Length = 131
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERK + H+ N T +T+TD GN +S +G F G + S +AA+ +
Sbjct: 19 ERKRKIKDFVHLPPIHNKTFVTVTDARGNKKTGASAGCLGEFKGGSRLSRYAAEATAEHV 78
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A N GM S+ +KV G R
Sbjct: 79 GRSAINLGMKSVVMKVKGSTYFRK 102
>gi|17944494|gb|AAL48136.1| RH04612p [Drosophila melanogaster]
Length = 123
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MPKSPSRIRNRERK----------NIVSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M ++++ E + IV G AH+ ++FN+T + +TD G TIA + +
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 50 VGFSGSRKNSPFAAQ 64
+ + SP+AA
Sbjct: 61 KVKADRDEASPYAAM 75
>gi|32348748|gb|AAP76348.1| small subunit ribosomal protein [Bocconia frutescens]
gi|32348780|gb|AAP76363.1| small subunit ribosomal protein [Tetracentron sinense]
Length = 148
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ ++ + + + H NNT +T+TD GN +S + G + S
Sbjct: 31 SEEDEQLERKNKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSR 85
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 86 YAAEATAEHVGRSARNLGMKSVVMKVKGSTYFRK 119
>gi|32348750|gb|AAP76349.1| small subunit ribosomal protein [Sanguinaria canadensis]
Length = 142
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERKN H++ NNT +T+TD GN +S + G + S +AA+ +
Sbjct: 38 ERKN--KDFVHLLLIHNNTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATAEHV 95
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A+ G+ S+ +KV G R
Sbjct: 96 GRSARKMGLKSVVMKVKGSSYFRK 119
>gi|319738237|emb|CBJ18013.1| ribosomal protein S11 [Ectocarpus siliculosus]
Length = 158
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 7/133 (5%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV----GFSGSR 56
M K + N+ G ++ ST N + D + S V R
Sbjct: 18 MSKILQHNKKEA--NVKRGNVYIKSTNKNIFCILLDAQDKKVKTSCSLRVPEYENEFNER 75
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKVS-GLGAGRDSALRALRAIGFTIVSICDVTM 115
+N + + K +N G + + V + + R + L I I +
Sbjct: 76 ENVFKRGILLGELFGDKVENLGYTEIVVYLDFNINKARKGVMVGLSKKKVKISLIELLKN 135
Query: 116 IAHNGCRPRKRRR 128
HNGCRP K RR
Sbjct: 136 YPHNGCRPSKTRR 148
>gi|224032965|gb|ACN35558.1| unknown [Zea mays]
Length = 125
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVK--------VSGLGAGRDSALR 98
+ + ++ P+AA +A D + + + G+++L +K + G G SALR
Sbjct: 18 GAMKVKADRDESLPYAAMLAAQDAAQRCKELGITALNIKLRAIGGNKIKTPGPGAQSALR 77
Query: 99 ALRAIGFTIVSICDVTMIAHNGCRPRKRR 127
AL G I I +VT + + R + R
Sbjct: 78 ALARSGMKIGRIENVTPVPTDSIRRKGGR 106
>gi|320581428|gb|EFW95649.1| Mitochondrial ribosomal protein of the small subunit [Pichia
angusta DL-1]
Length = 202
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 34/155 (21%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNT-------------------------IA 43
+ + +V H + NN+ +T+T +T +
Sbjct: 48 KKAPQMKLVKFVLHGLFRKNNSHLTLTKVEYDTNFEQNNPQLSFNEKVLYYLTLPEKTVY 107
Query: 44 WSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS----SLEVKVSGLGAGRDS---A 96
+ +GF G+++ AA + + +LEV V G GR + A
Sbjct: 108 TLNTGTIGFRGAQRGEYEAAYQLSSAFFRTIRERKYFKGDVNLEVVVKDFGKGRRAFFDA 167
Query: 97 LRALRAIGFT--IVSICDVTMIAHNGCRPRKRRRI 129
L+ +G + + D+T I G + RR+
Sbjct: 168 LKGKEGLGVREHVCKLTDMTPIKFGGVQGPTPRRL 202
>gi|32348746|gb|AAP76347.1| small subunit ribosomal protein [Eschscholzia californica]
Length = 132
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERKN H++ NNT +T+TD GN +S + G + S +AA+ +
Sbjct: 22 ERKN--KDFVHLLPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEATAEHV 79
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A+N GM S+ +KV G R
Sbjct: 80 GRSARNLGMKSVVMKVKGSTYFRK 103
>gi|149236183|ref|XP_001523969.1| hypothetical protein LELG_04782 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452345|gb|EDK46601.1| hypothetical protein LELG_04782 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 258
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 24 VSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM---- 79
++N+ I + ++GF +++ A Q
Sbjct: 144 HLSYNDKVIYYMQLPHKVKYDVTAGMLGFRKTQRQEYEAGFQVAAKMFKTIQERNYIGPN 203
Query: 80 SSLEVKVSGLGAGR---DSALRALRAI--GFTIVSICDVTMIAHNGCRPRKRRRI 129
+E+ + G GR ++AL IV I + T + G R +K RR+
Sbjct: 204 DKVELVFTNFGKGRQAFEAALLGKEGSFLRNNIVRIVENTTLKFGGHRSKKVRRL 258
>gi|328849283|gb|EGF98466.1| hypothetical protein MELLADRAFT_113483 [Melampsora larici-populina
98AG31]
Length = 273
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 60/188 (31%), Gaps = 67/188 (35%)
Query: 8 IRNRERKNIVSGRAHVVSTFNNTRITIT---------------------DPHGNTIAWSS 46
IR R + + ST NNTR+T+T G IA +
Sbjct: 87 IRRRSGERTSYSLI-IKSTSNNTRLTLTHTPISNLPGSWSGHAEYQKAFPMAGAIIARVT 145
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNH----------GM----------------- 79
VGF ++ AA AT + G+
Sbjct: 146 AGSVGFKRGKRQEYEAATQATLAMFKTIKELISQGADSNLSGIGSLINPNEILTKNAVSS 205
Query: 80 -------------SSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGC 121
+E+ G G GRD+ + +L I I S+ D T++ G
Sbjct: 206 IDLNKRSIKEGLPREIEIVFDGFGNGRDAFVSSLMGAQGIGIRELIRSVRDKTILKIGGP 265
Query: 122 RPRKRRRI 129
RP+KRRR+
Sbjct: 266 RPKKRRRV 273
>gi|32348772|gb|AAP76359.1| small subunit ribosomal protein [Nelumbo nucifera]
Length = 148
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ + +++ + H NNT +T+TD GN +S + G + S
Sbjct: 31 SEEDEQFFRKKKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSR 85
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG--LGAGRDSALRALR 101
+AA+ + A+N GM S+ +KV G + + + + R
Sbjct: 86 YAAEATAEHVGRSARNLGMKSVVMKVKGSTFFKKKKAVILSWR 128
>gi|200004065|ref|YP_002221399.1| ribosomal protein L11 [Blastocystis sp. NandII]
gi|198385487|gb|ACH86080.1| ribosomal protein S11 [Blastocystis sp. NandII]
Length = 202
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 5/105 (4%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
+ ++ T NN +T N I S +GF G K + +A + + QN
Sbjct: 79 QIYIKVTLNNIFVTY--FINNKIYTKSIASLGFKGKSKQTIYAYKTFAESILKDLQNLSP 136
Query: 80 SS---LEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+ + + + L + I I D T + NGC
Sbjct: 137 NQSIIVNLYIKSLSKKLKPLYHIFKVNNIKINKIYDTTSQSFNGC 181
>gi|87240802|gb|ABD32660.1| Ribosomal protein S11 [Medicago truncatula]
Length = 77
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 46 SPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGF 105
+ GF G+R+ +PFAAQ A + + GM V + G G GRD+ALRA+ G
Sbjct: 5 TKTSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGI 64
Query: 106 TIVSICDVT 114
+ I DVT
Sbjct: 65 LLRFIRDVT 73
>gi|32348768|gb|AAP76358.1| small subunit ribosomal protein [Betula nigra]
Length = 128
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ ++ + + + H NNT +T+TD GN +S + G + S
Sbjct: 15 SEEDEQLERKNKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEIKGRSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG--LGAGRDSALRALR 101
+AA+ + A N GM S+ +KV G + + + + R
Sbjct: 70 YAAEATAEHVGRSAINLGMKSVVMKVKGATFLRKKKAVILSWR 112
>gi|32348778|gb|AAP76362.1| small subunit ribosomal protein [Trochodendron aralioides]
Length = 148
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ NNT +T+TD GN +S + G + S +AA+ + A+N GM
Sbjct: 45 VHLPPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEATAEHVGRSARNLGM 104
Query: 80 SSLEVKVSGLGAGRD 94
S+ +KV G R
Sbjct: 105 KSVVMKVKGSTYFRK 119
>gi|32348760|gb|AAP76354.1| small subunit ribosomal protein [Cabomba sp. Qiu 97027]
Length = 130
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERKN H+ NNT +T+TD GN +S + G + S +AA+ +
Sbjct: 20 ERKN--KDFVHLSPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSQYAAEATAEHV 77
Query: 71 SAKAQNHGMSSLEVKVSG--LGAGRDSALRALR 101
A+ GM S+ +KV G + + + + R
Sbjct: 78 GRSARKMGMKSVVMKVKGSTFFRKKKAVILSWR 110
>gi|32348720|gb|AAP76334.1| small subunit ribosomal protein [Anemone quinquefolia]
Length = 134
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
K ++ + +K H+ NNT +T+TD GN +S + F G + S
Sbjct: 15 SKEDKQLGLKNKK---KDFVHLPPIHNNTFVTVTDARGNKKTGASAGCLEEFKGRSRLSR 71
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 72 YAAKATAEHVGRSARNLGMKSVVMKVKGSTYFRK 105
>gi|32348734|gb|AAP76341.1| small subunit ribosomal protein [Weigela hortensis]
Length = 147
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERK + H+ N T +T+TD GN +S + F G + S +AA+ +
Sbjct: 35 ERKRKIKDFVHLPPIHNKTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEATAEHV 94
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A+N GM S+ +KV G R
Sbjct: 95 GRSARNLGMKSVVMKVKGSTYFRK 118
>gi|331243311|ref|XP_003334299.1| hypothetical protein PGTG_15836 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313289|gb|EFP89880.1| hypothetical protein PGTG_15836 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 271
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 39 GNTIAWSSPKVVGFSGSRKNSPFAAQVA-----------------TDDCSAKAQNHGM-S 80
G +A + VGF R+ AA A + A G+
Sbjct: 158 GAVVARVTAGSVGFKRGRRQEYEAATQACLAMFAKIRELIKLPTVARVNANPAVREGVPR 217
Query: 81 SLEVKVSGLGAGRDSALRALRAI-----GFTIVSICDVTMIAHNGCRPRKRRRI 129
LEV +G G GRD+ L +L + S+ D T++ G RP+KRRR+
Sbjct: 218 ELEVVFNGFGIGRDAFLASLLNSQATDLRELVRSLRDSTVVKIGGPRPKKRRRV 271
>gi|1524339|emb|CAA63079.1| ribosomal protein S11 [Streptomyces coelicolor A3(2)]
Length = 30
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 100 LRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
L+A G + SI DVT HNGCRP KRRR+
Sbjct: 1 LQATGLEVGSIQDVTPTPHNGCRPPKRRRV 30
>gi|197107541|gb|ACH42350.1| ribosomal protein S11 [Nymphaea tetragona]
Length = 116
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H NNT +T+TD GN +S + G + S +AA+ + A+ GM
Sbjct: 29 VHFSPIHNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEATAEHVGRSARKMGM 88
Query: 80 SSLEVKVSGLGAGRD 94
S+ +KV G R
Sbjct: 89 KSVVMKVKGSTYFRK 103
>gi|32348800|gb|AAP76373.1| small subunit ribosomal protein [Dendrocalamus strictus]
Length = 126
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ + +++++ HV+ N T +T+TD GN +S + G + S
Sbjct: 14 SEEYKQCSRKKKRDF----IHVLLMKNKTFVTVTDARGNKKTGASAGCLEERKGRSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSG--LGAGRDSALRALRAIGFTIVSICDVTMI 116
+AA+ + A+ G+ S+ +KV G + + + GF + D + I
Sbjct: 70 YAAEATAEHVGRSARKMGLKSVVMKVKGSTYFKKKKKVILSW-REGFRGERVRDRSPI 126
>gi|32348774|gb|AAP76360.1| small subunit ribosomal protein [Grevillea robusta]
Length = 148
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERKN H+ NNT +T+TD GN +S + G + S +AA+ +
Sbjct: 38 ERKN--KDFVHLPPKNNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEATAEHV 95
Query: 71 SAKAQNHGMSSLEVKVSG--LGAGRDSALRALR 101
A+N GM S+ +KV G + + + + R
Sbjct: 96 GRSARNLGMKSVVMKVKGSTFFRKKKAVILSWR 128
>gi|32348730|gb|AAP76339.1| small subunit ribosomal protein [Abelia x grandiflora]
gi|32348732|gb|AAP76340.1| small subunit ribosomal protein [Kolkwitzia amabilis]
Length = 131
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERK + H+ N T +T+TD GN +S + F G + S +AA+ +
Sbjct: 19 ERKRKIKDFVHLPPIHNKTFVTVTDARGNKKTGASAGCLEEFKGGSRLSRYAAEATAEHV 78
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A N GM S+ +KV G R
Sbjct: 79 GRSAINLGMKSVVMKVKGSTYFRK 102
>gi|159145684|gb|ABW90379.1| putative ribosomal protein S14 [Sipunculus nudus]
Length = 65
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
V G AH+ ++FN+T + +TD +TI + + + + SP+AA +A +
Sbjct: 10 VFGVAHIYASFNDTFVHVTDLSDKDTIVRVTGDMNVKADPDEASPYAAMLAAHYSA 65
>gi|291510264|gb|ADE10088.1| ribosomal protein S11 [Tremella fuciformis]
Length = 92
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRAL 100
+ + ++SP+AA +A D +AK + G+++L VK+ G G +ALRAL
Sbjct: 1 MKVKADRDESSPYAAMLAAQDVAAKCKEVGITALHVKLRATGGTGTKQPGPGGQAALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 61 ARAGMRIGRIEDVTPIP 77
>gi|32348762|gb|AAP76355.1| small subunit ribosomal protein [Annona cherimola]
Length = 132
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
K + + + H NNT +T+TD GN +S + G + S
Sbjct: 15 SKEDEQFERENKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLKEIKGGSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 70 YAARATAEHVGRSARNLGMKSVVMKVKGSTYFRK 103
>gi|32348776|gb|AAP76361.1| small subunit ribosomal protein [Platanus occidentalis]
Length = 148
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
ERKN H+ NNT +T+TD GN +S + G + S +AA+ +
Sbjct: 38 ERKN--KXFVHLPPKNNNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAEATAEHV 95
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRD 94
A+N GM S+ +KV G R
Sbjct: 96 GRSARNLGMKSVVMKVKGSTYFRK 119
>gi|32348718|gb|AAP76333.1| small subunit ribosomal protein [Clematis sp. Qiu 95085-2]
Length = 134
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
K ++ ++RK H+ NNT +T+TD GN +S + F G + S
Sbjct: 15 SKEDKQLGLKKRK---KDFVHLPPIRNNTFVTVTDARGNKKTGASTGCLKEFKGRSRRSR 71
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+N GM S+ +KV G R
Sbjct: 72 YAAKATAEHVGRSARNLGMKSVVMKVKGSTYFRK 105
>gi|324309742|gb|ADY18523.1| ribosomal protein S11 [Phaeodactylum tricornutum]
Length = 176
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 11 RERKNIVS-----GRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSG-SRKNSPFAAQ 64
+ER+ I + + + NT + +TD GN S + G S+++ +
Sbjct: 51 KERRLIENDFRITYIIDIQFSRANTFLHVTDFIGNLKFSCSAGSFDYEGKSKRSRLVILK 110
Query: 65 VATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPR 124
+K + L + + +G + ++ L+ F I +I + HNGCR
Sbjct: 111 KFFHTLISKLKFLQGECLALHLKNVGPNKFWVVKQLK-TKFYIRTIRSFSFYPHNGCRKP 169
Query: 125 KRRR 128
K RR
Sbjct: 170 KVRR 173
>gi|326475399|gb|EGD99408.1| Mitochondrial ribosomal protein subunit S18 [Trichophyton tonsurans
CBS 112818]
Length = 200
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 36/114 (31%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
H+ S N T+T P+ + S +GF
Sbjct: 117 LHIYSHRRNVHATLTKPNNEVLMSVSTGNIGF---------------------------- 148
Query: 81 SLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ + G G GR++ + L + + IV + D T + G R RR+
Sbjct: 149 ---LILRGFGPGREAFTKVLLGKEGKVLRERIVRVSDSTRLKFGGTRSPAVRRL 199
>gi|217072484|gb|ACJ84602.1| unknown [Medicago truncatula]
Length = 218
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTI-AWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ NN +T+TD GN + S+ + +K S +AA+ + +++ G+
Sbjct: 119 VHIKMRRNNAFVTVTDSKGNVKLSGSAGSLKDMKSGQKLSRYAAEATAEVVGRRSRGLGL 178
Query: 80 SSLEVKVSGLGAGR 93
S+ +KV+G R
Sbjct: 179 KSVVMKVNGFTHFR 192
>gi|11496559|ref|NP_044556.1| ribosomal protein S11 [Toxoplasma gondii RH]
gi|5231262|gb|AAD41156.1|U87145_25 ribosomal protein S11 [Toxoplasma gondii]
Length = 135
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 18/125 (14%)
Query: 21 AHVVSTFNNTRIT-------------ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
++ ST NT ++ I D N + S GF +K + FA
Sbjct: 9 LYIKSTGKNTFLSLLQNNLIFNTNKLILDKKQNILNTYSCGNFGFKNRKKETAFACSFIV 68
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRDSALRAL-----RAIGFTIVSICDVTMIAHNGCR 122
N + + + G+G R L + ++SI D+T + NGC
Sbjct: 69 TKILLLIINLKIKFFHIVMKGIGLYRKIILTTILTFLNEHPDLKLLSITDLTQSSFNGCS 128
Query: 123 PRKRR 127
+KR+
Sbjct: 129 SKKRK 133
>gi|119568957|gb|EAW48572.1| hCG1643627, isoform CRA_b [Homo sapiens]
Length = 117
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTM 115
+A D + + G+++L++K+ G G G +ALR +G I I DVT
Sbjct: 1 MLAAQDVAQRCNELGITALQIKLQGAGGNRTKTPGPGAQTALRVPACLGMKIGQIEDVTP 60
Query: 116 IA 117
Sbjct: 61 NP 62
>gi|32348782|gb|AAP76364.1| small subunit ribosomal protein [Polyalthia suberosa]
Length = 132
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATD 68
+ + + H NNT +T+TD GN +S + G + S +AA +
Sbjct: 23 RKNKDFVHLPPIH-----NNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSRYAAGATAE 77
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRD 94
A+N GM S+ +KV G R
Sbjct: 78 HVGRSARNLGMKSVVMKVKGSTYFRK 103
>gi|221059367|ref|XP_002260329.1| ribosomal protein S11 [Plasmodium knowlesi strain H]
gi|193810402|emb|CAQ41596.1| ribosomal protein S11, putative [Plasmodium knowlesi strain H]
Length = 234
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDP--HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN I + + + T+ S VGF+ + + S A ++ + K + G+
Sbjct: 124 ITTSKNNVHIQVVNKSKNYKTVFGSFAGNVGFTKTLQQSERCAYRIGENIAKKCRRLGIF 183
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
S+++K + ++ L+A+ A I I + N +PRKRRR+
Sbjct: 184 SIDIKFRRI-MRVETVLQAMYANNLNITQIIHEPRLPKCGLNASKPRKRRRV 234
>gi|156100233|ref|XP_001615844.1| ribosomal protein S11 [Plasmodium vivax SaI-1]
gi|148804718|gb|EDL46117.1| ribosomal protein S11, putative [Plasmodium vivax]
Length = 234
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 23 VVSTFNNTRITITDP--HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN + + + + T+ S VGF+ S + S A ++ + K + G+
Sbjct: 124 ITTSKNNVHVQVVNKSKNYKTVFGSFAGNVGFTKSLQQSERCAYRIGENIAKKCRRLGIF 183
Query: 81 SLEVKVSGLGAGR-DSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
S+++K R ++ L+A+ A I I + N +PRKRRR+
Sbjct: 184 SIDIKFR--RIMRVETVLQAMYANNLNITQIIHEPRLPKCGLNASKPRKRRRV 234
>gi|124809820|ref|XP_001348693.1| mitochondrial ribosomal protein S11 precursor, putative [Plasmodium
falciparum 3D7]
gi|23497591|gb|AAN37132.1| mitochondrial ribosomal protein S11 precursor, putative [Plasmodium
falciparum 3D7]
Length = 229
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDP--HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN I + + + TI S VGF+ + + S A ++ + K + G+
Sbjct: 119 ITTSKNNVHIQVVNKSKNYKTIFGSFAGNVGFTKTLQQSERCAYRIGENIAKKCRRLGIF 178
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
S+++K + ++ L+A+ A I I + N +PRKRRR+
Sbjct: 179 SIDIKFRRI-MRVETVLQAMYANNLNITQIIHEPRLPKCGLNASKPRKRRRV 229
>gi|312381456|gb|EFR27202.1| hypothetical protein AND_06236 [Anopheles darlingi]
Length = 1369
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 29/61 (47%)
Query: 33 TITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG 92
ITD G S + GF +RK + AAQ S+KA G ++ V V GLG G
Sbjct: 1303 NITDAKGVPQFIRSCGIEGFKNTRKGTNIAAQATAISISSKAIERGYKTVRVTVRGLGPG 1362
Query: 93 R 93
R
Sbjct: 1363 R 1363
>gi|32348794|gb|AAP76370.1| small subunit ribosomal protein [Cocos nucifera]
Length = 126
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVAT 67
R + R + HV+ N T +T+TD GN +S + G + S +AA+
Sbjct: 22 RKKNRDFV-----HVLLIKNKTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATA 76
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+ A+ G+ S+ +KV G R
Sbjct: 77 EHVGRSARKMGLKSVVMKVKGSTYFRK 103
>gi|67623403|ref|XP_667984.1| 40S ribosomal protein S14 [Cryptosporidium hominis TU502]
gi|54659161|gb|EAL37752.1| 40S ribosomal protein S14 [Cryptosporidium hominis]
Length = 92
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + +NSP+AA +A D + K + G+ +L +K+ +G G SALRAL
Sbjct: 1 MKVKADRDENSPYAAMMAAVDVAQKCKEFGIHALHIKLRAVGGVKSKTMGPGAQSALRAL 60
Query: 101 RAIGFTIVSICDVTMIA 117
G I I DVT I
Sbjct: 61 ARAGMKIGRIEDVTPIP 77
>gi|32348784|gb|AAP76365.1| small subunit ribosomal protein [Pandanus tectorius]
Length = 126
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
HV+ N T +T+TD GN +S + G + S +AA+ + A+ G+
Sbjct: 29 VHVLLIKNKTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATAEHVGRSARKMGL 88
Query: 80 SSLEVKVSGLGAGRD 94
S+ +KV G R
Sbjct: 89 KSVVMKVKGSTYFRK 103
>gi|170029915|ref|XP_001842836.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167865296|gb|EDS28679.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 130
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 26/107 (24%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++ T + +TD G V K
Sbjct: 41 EIVFGVAYVYASIKYTFVHVTDLLGKLALR------------------CYVVALYVGGKC 82
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDV 113
++ G++SL +K+ G G S L AL IV I ++
Sbjct: 83 KSLGITSLHMKLRAAGGTCTKTPGPGAQSVLGALARSSMNIVKIINI 129
>gi|32348796|gb|AAP76371.1| small subunit ribosomal protein [Tradescantia sp. Qiu 94150]
Length = 121
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATD 68
R + R + V+ N T +T+TD GN +S + G + S +AA+ +
Sbjct: 19 RKKNRDFVP-----VLLIKNKTFVTVTDARGNKKTGASAGCLE-EGRSRLSRYAAEATAE 72
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRD 94
A+ G+ S+ +KV G R
Sbjct: 73 HVGRSARKMGLKSVVMKVKGSTYFRK 98
>gi|32348788|gb|AAP76367.1| small subunit ribosomal protein [Prosartes hookeri]
Length = 126
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ + +++++ HV+ T +T+TD GN +S + G + S
Sbjct: 14 SEEDEQCSRKKKRDF----VHVLLIKKKTFVTVTDARGNKKTGASAGCLEERKGRSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+ G+ S+ +KV G R
Sbjct: 70 YAAEATAEHVGRSARKMGLKSVVMKVKGYTFFRK 103
>gi|119568956|gb|EAW48571.1| hCG1643627, isoform CRA_a [Homo sapiens]
Length = 74
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDVTM 115
+A D + + G+++L++K+ G G G +ALR +G I I DVT
Sbjct: 1 MLAAQDVAQRCNELGITALQIKLQGAGGNRTKTPGPGAQTALRVPACLGMKIGQIEDVTP 60
Query: 116 IA 117
Sbjct: 61 NP 62
>gi|32348764|gb|AAP76356.1| small subunit ribosomal protein [Liriodendron tulipifera]
Length = 132
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ ++ + + + H NT +T+TD GN +S + G + S
Sbjct: 15 SEEDEQLERKNKDFVHLPPIH-----KNTFVTVTDARGNKKTGASAGCLEEIKGGSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA + A+N GM S+ +KV G R
Sbjct: 70 YAAGATAEHVGRSARNLGMKSVVMKVKGSTYFRK 103
>gi|82752729|ref|XP_727408.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483239|gb|EAA18973.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 232
Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDP--HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN I + + + TI S VGF+ + + S A ++ + K + G+
Sbjct: 122 ITTSKNNVHIQVLNKSKNYKTIFNSFAGNVGFTKTLQQSERCAYRIGENIAKKCKRLGIF 181
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
S+++K + ++ L+A+ A I I + N +PRKRRR+
Sbjct: 182 SIDIKFRRI-MRVETVLQAMYANNLNITEIIHEPRLPKCGLNASKPRKRRRV 232
>gi|68076481|ref|XP_680160.1| ribosomal protein S11 [Plasmodium berghei strain ANKA]
gi|56501052|emb|CAH94494.1| ribosomal protein S11, putative [Plasmodium berghei]
Length = 198
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDP--HGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN I + + + TI S VGF+ + + S A ++ + K + G+
Sbjct: 88 ITTSKNNVHIQVLNKSKNYKTIFNSFAGNVGFTKTLQQSERCAYRIGENIAKKCKRLGIF 147
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
S+++K + ++ L+A+ A I I + N +PRKRRR+
Sbjct: 148 SIDIKFRRI-MRVETVLQAMYANNLNITEIIHEPRLPKCGLNASKPRKRRRV 198
>gi|328478178|gb|EGF48021.1| 30S ribosomal protein S11 [Lactobacillus rhamnosus MTCC 5462]
Length = 58
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 34 ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLG 90
ITDP GN IAWSS +GF GSRK++PFAAQ+A + + ++ HGM S+EV V G G
Sbjct: 2 ITDPRGNAIAWSSAGALGFKGSRKSTPFAAQMAAEAAAKESMEHGMKSVEVAVKGPG 58
>gi|195190203|ref|XP_002029492.1| GL15093 [Drosophila persimilis]
gi|194103209|gb|EDW25252.1| GL15093 [Drosophila persimilis]
Length = 84
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGN-TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSA 72
V G H+ S+FN+T + +TD G T+ + + + + SP+AA++ D +
Sbjct: 27 VFGVVHIFSSFNDTFVHVTDLSGRETMVRVTGGMKVKADRDEVSPYAAKLPALDVTK 83
>gi|170027652|ref|XP_001841711.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167862281|gb|EDS25664.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 126
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M ++ R E + ++FN+T + +TD G T + + + + + S
Sbjct: 1 MASCKNKTRKEEFSS--------YASFNDTFVHVTDLSGKETTSRVTGNMNAKADRDEAS 52
Query: 60 PFAAQVATDDCSAKA 74
P+AA +A D + K
Sbjct: 53 PYAALLAAQDVADKC 67
>gi|170068915|ref|XP_001869044.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
gi|167864919|gb|EDS28302.1| 40S ribosomal protein S14-3 [Culex quinquefasciatus]
Length = 96
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 27/105 (25%)
Query: 17 VSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
V G A+V ++FN+T + +TD G VA K ++
Sbjct: 10 VFGVAYVYASFNDTFVHVTDLLGKLALR------------------CYVAALYVGGKCKS 51
Query: 77 HGMSSLEVKVSG--------LGAGRDSALRALRAIGFTIVSICDV 113
G++SL +K+ G G S + AL IV I ++
Sbjct: 52 LGITSLHMKLRAAGGTCTKIPGPGAQS-VPALARSSMNIVKIINI 95
>gi|633676|emb|CAA86389.1| N0397 [Saccharomyces cerevisiae]
Length = 198
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 31/131 (23%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT------------------------DPHGNTIAWSS 46
+ ++ +V H T NNT +T + + S
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFSSVVEDKNFHKNKGLTYNDTMLYYLNLPQKVKISLS 127
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEVKVSGLGAGRDSALRAL---- 100
+GF + + AA + + M +EV + G GR + + AL
Sbjct: 128 TGCLGFRKAARGEYEAAFQTSGRMFELIKEKNMLNKDIEVVMDDFGKGRAAFISALVGKE 187
Query: 101 -RAIGFTIVSI 110
++ +V I
Sbjct: 188 GASVVKKVVKI 198
>gi|326489755|dbj|BAK01858.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 76
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 64 QVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTM 115
A D + + ++++ +K+ G G SALRA+ G I I DVT
Sbjct: 1 MQAAIDIVNRLKQLNITAVHIKLRARGGNGDKAPGPGAQSALRAIARNGIKIGRIEDVTP 60
Query: 116 IAHNGCRP--RKRRRI 129
I + R RK RR+
Sbjct: 61 IPTDSTRRGCRKGRRL 76
>gi|32348756|gb|AAP76352.1| small subunit ribosomal protein [Peperomia sp. Qiu 96236]
Length = 132
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ N T +T+TD GN +S + G + S +AA + A N G+
Sbjct: 29 VHLPPIHNKTFVTVTDARGNKKTGASAGCLEERKGGSRLSQYAAGATAEHVGRSALNLGI 88
Query: 80 SSLEVKVSGLGAGRD 94
S+ +KV G R
Sbjct: 89 QSVVMKVKGSTYFRK 103
>gi|169839270|ref|ZP_02872458.1| hypothetical protein cdivTM_19512 [candidate division TM7
single-cell isolate TM7a]
Length = 57
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 22 HVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPF 61
++ STFNNT +TITD G + W S GF G++K +PF
Sbjct: 1 YIHSTFNNTVVTITDAEGKVVIWKSGGTSGFKGTKKGTPF 40
>gi|32348792|gb|AAP76369.1| small subunit ribosomal protein [Typha sp. Qiu 94061]
Length = 126
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 9 RNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVAT 67
R + R + HV+ T +T+TD GN +S + G + S +AA+
Sbjct: 22 RKKNRDFV-----HVLLMKKKTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATA 76
Query: 68 DDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+ A+ G+ S+ +KV G R
Sbjct: 77 EHVGRSARKMGLKSVVMKVKGSTYFRK 103
>gi|32348798|gb|AAP76372.1| small subunit ribosomal protein [Juncus sp. Qiu 94042]
Length = 126
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPF 61
+ + +++++ HV+ T +T+TD GN +S + G + S +
Sbjct: 15 EEDEQSSRKKKRDF----VHVLLMKKKTFVTVTDAGGNKKTGASAGCLEERKGRSRLSRY 70
Query: 62 AAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
AA+ + A+ G+ S+ +KV G R
Sbjct: 71 AAEATAEHVGRSARKMGVKSVVMKVKGSTYFRK 103
>gi|2500442|sp|Q29303|RS14_PIG RecName: Full=40S ribosomal protein S14
Length = 79
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 5 PSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVG 51
P + + ++ + + V G H+ ++ N+T + +TD G +I + +
Sbjct: 1 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASPNDTFVHVTDLSGXESICRVTGGMKM 60
Query: 52 FSGSRKNSPFAAQVATDDC 70
+ + SP+ A +A
Sbjct: 61 KADRXEXSPYXAMLAAQAV 79
>gi|149048547|gb|EDM01088.1| rCG41557 [Rattus norvegicus]
Length = 125
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGNT-IAWSSP 47
M P + + ++ + + V G H+ ++F++T + +T I +
Sbjct: 1 MA--PYKGKEKKEEQVISLKPQVAEGENVFGVCHIFASFSDTFVHVTILSDKASICQVTG 58
Query: 48 KVVGFSGSRKNSPFAAQVATDDCSAKAQN 76
+ G + SP+A +A + + ++
Sbjct: 59 GMRGKANCGDCSPYATMLAAQAVAQRGKD 87
>gi|170033313|ref|XP_001844522.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874260|gb|EDS37643.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 147
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 26/98 (26%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G A+V ++FN+ + +TD G VA K
Sbjct: 68 EIVFGVAYVYASFNDIFVHVTDLLGKLALR------------------CYVAALYVGGKC 109
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIG 104
++ G++SL +K+ G G S L AL
Sbjct: 110 KSLGITSLHMKLRAAGGTCTKTPGPGAQSVLGALAVRR 147
>gi|134285569|gb|ABO69735.1| 30S ribosomal protein S11 [Triticum aestivum]
gi|144583746|gb|ABP01571.1| 30S ribosomal protein S11 [Triticum aestivum]
Length = 65
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 10 NRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPK 48
+ + I G HV ++FNNT IT+TDP G + WSS
Sbjct: 27 RKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSTG 65
>gi|32348786|gb|AAP76366.1| small subunit ribosomal protein [Hosta sp. Qiu 94191]
Length = 126
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ + +++++ HV+ T +T+TD GN +S + G + S
Sbjct: 14 SEEDEQCSRKKKRDF----VHVLLIKKKTFVTVTDARGNKKTGASAGSLEERKGRSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+ G+ S+ +KV G R
Sbjct: 70 YAAEATAEHVGRSARKIGLKSVVMKVKGSTYFRK 103
>gi|2500443|sp|P93377|RS14_TOBAC RecName: Full=40S ribosomal protein S14
gi|1762931|gb|AAC49968.1| ribosomal protein S14 [Nicotiana tabacum]
Length = 66
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 75 QNHGMSSLEVKV--------SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
+ G+++L +K+ G G SALRAL G I I DVT I
Sbjct: 1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 51
>gi|320165733|gb|EFW42632.1| hypothetical protein CAOG_07764 [Capsaspora owczarzaki ATCC 30864]
Length = 354
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA--QNH 77
+ T NN + + G + + GF +++ S FA Q A
Sbjct: 258 VLRIRFTKNNVKFVYSTATGQMRYFKTAGSAGFKNAKRKSTFAGQQACYQVVQHIMTMEK 317
Query: 78 GMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDV 113
+ V +SG+ R S +R + I+S D+
Sbjct: 318 RRHPIRVFLSGMSVARSSVMRVVTNSPLNIISYTDI 353
>gi|297733611|emb|CBI14858.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 19/100 (19%)
Query: 41 TIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAG 92
T+ ++ + + ++SP AA A D S + + ++ L VK+ G G
Sbjct: 12 TLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHAARGNKTKTPGPG 71
Query: 93 RDSALRALRA-IGFTIVSICDVTMIAHNG------CRPRK 125
SAL+A + + VT + CR K
Sbjct: 72 AQSALQAPCSFWNENVA----VTPFPTHSSLFSFTCRHPK 107
>gi|218188647|gb|EEC71074.1| hypothetical protein OsI_02833 [Oryza sativa Indica Group]
Length = 133
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 4 SPSRIRNRERKNIVSGR---AHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNS 59
+PSRI ++ ++++V G+ HV+ N T +T+TD GN +S + G + S
Sbjct: 50 TPSRIFDKHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNRKTGASAGCLEDKKGRSRLS 109
Query: 60 PFAAQVATDDCSAKAQN 76
+A + + A+
Sbjct: 110 KYATEATAEHVGRAARK 126
>gi|32348790|gb|AAP76368.1| small subunit ribosomal protein [Dracaena fragrans]
Length = 126
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 2 PKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSP 60
+ + +++++ HV+ T + +TD GN +S + G + S
Sbjct: 14 SEEDEQCSRKKKRDF----VHVLLIKKKTFVAVTDSRGNKKTGASAGSLEERKGRSRLSR 69
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRD 94
+AA+ + A+ G+ S+ +KV G R
Sbjct: 70 YAAEATAEHVGRSARKIGLKSVVMKVKGSTYFRK 103
>gi|324568074|gb|ADY49904.1| 40S ribosomal protein S14 [Ascaris suum]
Length = 68
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSALRAL 100
+ + + SP+AA +A D + + + +++L +K+ G G SALRAL
Sbjct: 1 MKVKADRDEASPYAAMLAAQDVAERCKALSINALHIKLRATGGTKTKTPGPGAQSALRAL 60
Query: 101 RAIGFTI 107
G I
Sbjct: 61 ARSGIKI 67
>gi|170028548|ref|XP_001842157.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876279|gb|EDS39662.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 270
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 47 PKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFT 106
+ + SR+ P+A D + K G+++L + + + ALRA+
Sbjct: 190 RRHLSQGQSRRVLPYA----AQDVAEKFYLLGITALRINL----PKEEMALRAMACSSMK 241
Query: 107 IVSICDVTMIAHNGCR 122
I I DVT I + R
Sbjct: 242 ICRIEDVTSIPSDSTR 257
>gi|28804735|dbj|BAC64957.1| ribosomal protein S11 [Hylocomium splendens]
gi|28804738|dbj|BAC64959.1| ribosomal protein S11 [Plagiothecium euryphyllum]
gi|28804741|dbj|BAC64961.1| ribosomal protein S11 [Bartramia pomiformis]
Length = 22
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 109 SICDVTMIAHNGCRPRKRRRI 129
+ DVT + HNGCRP K+RR+
Sbjct: 2 FVRDVTPMPHNGCRPPKKRRV 22
>gi|67765003|gb|AAY79231.1| 40S ribosomal protein S14 [Siniperca chuatsi]
Length = 71
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 15/73 (20%)
Query: 1 MPKSPSRIRNRERKNI------------VSGRAHVVSTFNNTRITITDPHGNTI-AWSSP 47
M P + + ++ + + V G H+ ++FN+T + +TD G + +
Sbjct: 1 MA--PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTSVHVTDLSGKEMICRVTG 58
Query: 48 KVVGFSGSRKNSP 60
+ + ++SP
Sbjct: 59 GMKVKADRDESSP 71
>gi|242091297|ref|XP_002441481.1| hypothetical protein SORBIDRAFT_09g027680 [Sorghum bicolor]
gi|241946766|gb|EES19911.1| hypothetical protein SORBIDRAFT_09g027680 [Sorghum bicolor]
Length = 63
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 77 HGMSSLEVKVSG--LGAGRDSALRALR--------AIGFTIVSICDVTMIAHNGCRPRKR 126
G++S+ +KV G + + + R I+ I DVT + HNGCR RK+
Sbjct: 1 MGLTSVVLKVKGAAFFRKKKKVILSFREGFRGERVRDRSPIMYIHDVTQLPHNGCRLRKQ 60
Query: 127 RRI 129
RR+
Sbjct: 61 RRV 63
>gi|213024277|ref|ZP_03338724.1| 30S ribosomal protein S11 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 29
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPK 48
AH+ ++FNNT +TITD GN + W++
Sbjct: 2 AHIHASFNNTIVTITDRQGNALGWATAG 29
>gi|157109894|ref|XP_001650871.1| mitochondrial ribosomal protein, S11, putative [Aedes aegypti]
gi|108878908|gb|EAT43133.1| mitochondrial ribosomal protein, S11, putative [Aedes aegypti]
Length = 144
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
++ + NNT ITI D G S + GF +RK + AAQ
Sbjct: 86 ICNIRVSPNNTIITICDAKGTPQFIRSCGIEGFKNTRKGTNIAAQATA 133
>gi|58758771|gb|AAW81776.1| ribosomal protein S11 [Oedipodium griffithianum]
Length = 21
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 109 SICDVTMIAHNGCRPRKRRRI 129
+ DVT + HNGCRP K+RR+
Sbjct: 1 FVRDVTPMPHNGCRPPKKRRV 21
>gi|10802920|gb|AAG23668.1|AF288091_13 ribosomal protein S11 [Thraustochytrium aureum]
Length = 118
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 23 VVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSL 82
V T NN + + D + +A +S + F+ K +PF+ K + L
Sbjct: 16 VRVTKNNIHLNLLDSNSVCLAKASVGL--FTKRLKKNPFSITKMLHSFCNKIPSS--FLL 71
Query: 83 EVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ G +++L F I + V +NGCR +K+RR+
Sbjct: 72 NLVFIGFTKSHFMIIKSLVEGRFVINRLFFVNTKPYNGCRRKKKRRL 118
>gi|28804744|dbj|BAC64963.1| ribosomal protein S11 [Ceratodon purpureus]
Length = 24
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 109 SICDVTMIAHNGCRPRKRRRI 129
+ DVT + HNGCRP K+RR+
Sbjct: 4 FVRDVTPMPHNGCRPPKKRRV 24
>gi|58491827|gb|AAW78553.1| ribosomal protein S11 [Sphagnum fimbriatum]
Length = 21
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 110 ICDVTMIAHNGCRPRKRRRI 129
+ DVT + HNGCRP K+RR+
Sbjct: 2 VRDVTPMPHNGCRPPKKRRV 21
>gi|32348758|gb|AAP76353.1| small subunit ribosomal protein [Kadsura japonica]
Length = 130
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 21 AHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDCSAKAQNHGM 79
H+ NNT +T+TD GN S + G + S +AA + A N GM
Sbjct: 27 VHLPPIHNNTSVTVTDARGNKKTGVSAGCLKEIKGGSRLSRYAAAATAEHAGRSAINLGM 86
Query: 80 SSLEVKVSG--LGAGRDSALRALR 101
S+ +KV G + + + + R
Sbjct: 87 KSVVMKVKGSTFFRKKKAVILSWR 110
>gi|302412058|ref|XP_003003862.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261357767|gb|EEY20195.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 89
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 76 NHGMSSLEVKVSGLGAGRDSALRALRA-----IGFTIVSICDVTMIAHNGCRPRKRRRI 129
+ ++ +E+ + G G GRD+ ++ L + +V + D T + G R + RR+
Sbjct: 31 DKKINRIELVLRGFGQGRDAGVKCLMSPEGAVWRQKVVRVADSTRLKFGGSRSKNPRRL 89
>gi|169836399|ref|ZP_02869587.1| hypothetical protein cdivTM_04725 [candidate division TM7
single-cell isolate TM7a]
Length = 33
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 97 LRALRAIGFTIVSICDVTMIAHNGCRPRKRRR 128
+RA+ + T+ SI DVT + H G RP+K RR
Sbjct: 1 IRAMSNLDITVDSIKDVTGVPHGGVRPKKARR 32
>gi|4379136|emb|CAA83723.1| 30S ribosomal protein [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 27
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 103 IGFTIVSICDVTMIAHNGCRPRKRRR 128
G I SI D T I HNG RPRKR R
Sbjct: 1 AGLEITSIKDTTPIPHNGVRPRKRPR 26
>gi|19702213|emb|CAD28796.1| ribosomal protein S11 [Cuscuta reflexa]
Length = 18
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 1 DVTPMPHNGCRPPKQRRV 18
>gi|71017875|ref|XP_759168.1| hypothetical protein UM03021.1 [Ustilago maydis 521]
gi|46098789|gb|EAK84022.1| hypothetical protein UM03021.1 [Ustilago maydis 521]
Length = 85
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 49 VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAI----- 103
+ + ++SP+AA +A DC+ + + G+++L +K+ G
Sbjct: 1 MKVKADRDESSPYAAMLAAQDCAVRCKEVGITALHIKLRATGGTGTKTPGPGAQAALRAL 60
Query: 104 ---GFTIVSICDVTMIAHNGCRPR 124
G I I DVT + + R +
Sbjct: 61 ARAGMRIGRIEDVTPVPTDSTRRK 84
>gi|170065037|ref|XP_001867776.1| defective proboscis extension response [Culex quinquefasciatus]
gi|167882198|gb|EDS45581.1| defective proboscis extension response [Culex quinquefasciatus]
Length = 283
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ R E + ++FN+T + +TD G + + + + SP
Sbjct: 165 MASCKNKTRKEE--------FSLNASFNDTFVHVTDLSGKETSSRVT-LNAKADRDEASP 215
Query: 61 FAAQVATD 68
+AA +A
Sbjct: 216 YAALLAAQ 223
>gi|325117810|emb|CBZ53361.1| putative ribosomal protein S11 [Neospora caninum Liverpool]
Length = 152
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDPH--GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN + + TI S VG + A + + K + G+S
Sbjct: 42 ITTSKNNVHAQVVNKSRAYRTIFGSFAGNVGIRKQAQQDTQCAYRIGQNIARKCRRLGIS 101
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
+E+K + L+A A G + +I + N +PRKRRR+
Sbjct: 102 QVEIKFRRIMRVNQ-LLQAFTAHGLGVTAIAHEPRLPKCGQNATKPRKRRRV 152
>gi|237837431|ref|XP_002368013.1| ribosomal protein S11, putative [Toxoplasma gondii ME49]
gi|211965677|gb|EEB00873.1| ribosomal protein S11, putative [Toxoplasma gondii ME49]
gi|221488732|gb|EEE26946.1| ribosomal protein S11, putative [Toxoplasma gondii GT1]
gi|221509225|gb|EEE34794.1| ribosomal protein S11, putative [Toxoplasma gondii VEG]
Length = 152
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 23 VVSTFNNTRITITDPH--GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMS 80
+ ++ NN + + TI S VG + A + + K + G+S
Sbjct: 42 ITTSKNNVHAQVVNKSRAYRTIFGSFAGNVGIRKQAQQGTQCAYRIGQNIARKCRRLGIS 101
Query: 81 SLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAH---NGCRPRKRRRI 129
+E+K + L+A A G + +I + N +PRKRRR+
Sbjct: 102 QVEIKFRRIMRVNQ-LLQAFTAHGLGVTAIAHEPRLPKCGQNATKPRKRRRV 152
>gi|239790712|dbj|BAH71900.1| ACYPI004491 [Acyrthosiphon pisum]
Length = 107
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 20 RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVAT 67
H+ S+ NNT + + +G I S + GF +RK + A+Q +
Sbjct: 22 ICHIKSSRNNTLLHVIKVNGERIMIRSCGMEGFKNTRKGTNIASQATS 69
>gi|58758775|gb|AAW81779.1| ribosomal protein S11 [Andreaea rupestris]
Length = 18
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 112 DVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 1 DVTPMPHNGCRPPKKRRV 18
>gi|146076755|ref|XP_001462994.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134067076|emb|CAM65340.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322496427|emb|CBZ31497.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 371
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ + F + + DVT NG + +
Sbjct: 322 LVVRVMGFYNGRQGAVRAVQDRSADFRVRYLEDVTPFPLNGPKMPR 367
>gi|157863922|ref|XP_001687511.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68223722|emb|CAJ01954.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 371
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ + F + + DVT NG + +
Sbjct: 322 LVVRVMGFYNGRQGAVRAVQDRSADFRVRYLEDVTPFPLNGPKMPR 367
>gi|322488145|emb|CBZ23391.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 371
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ F + + DVT NG + +
Sbjct: 322 LVVRVMGFYNGRQGAVRAVQDRNADFRVRYLEDVTPFPLNGPKMPR 367
>gi|154332061|ref|XP_001561847.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059168|emb|CAM36867.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 364
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ + F + + DVT NG + +
Sbjct: 315 LVVRVMGFYNGRQGAVRAVQDRSTDFRVRYLEDVTPFPLNGPKMPR 360
>gi|3135462|gb|AAC16521.1| ribosomal protein S11 [Lathraea clandestina]
Length = 19
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 111 CDVTMIAHNGCRPRKRRRI 129
DVT + HNGCRP K+RR+
Sbjct: 1 RDVTPMPHNGCRPPKKRRV 19
>gi|32348804|gb|AAP76375.1| small subunit ribosomal protein [Pinus sp. Qiu 94013]
Length = 122
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDC 70
ERK H NNT +T TD GN +S + G + S +AA+ +
Sbjct: 22 ERKRNNKDFVHSPPIHNNTSVTATDDKGNKKTGASAGCLEEMKGGSRRSKYAAEATAEHV 81
Query: 71 SAKAQNHGMSSLEVKVSG-LGAGRDSAL 97
A+ G + V+V G G+ A+
Sbjct: 82 GRSAKKRG-KPVVVRVKGSTYLGKKKAV 108
>gi|68001007|ref|XP_669793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56484373|emb|CAI01410.1| hypothetical protein PB300193.00.0 [Plasmodium berghei]
Length = 61
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGN 40
+V G AH+ ++FN+T I +TD G
Sbjct: 25 ELVFGVAHIFASFNDTFIHVTDLSGR 50
>gi|32348802|gb|AAP76374.1| small subunit ribosomal protein [Abies firma]
Length = 122
Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 27 FNNTRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVK 85
NNT +T TD GN +S G + S +AA+ + A+N G + V+
Sbjct: 37 HNNTSVTATDDKGNKKTGASAGCSEEIKGGSRRSKYAAEATAEHVGRSAKNRG-KPVVVR 95
Query: 86 VSG-LGAGRDSALRALRAIGFTIVS 109
V G G+ A+ G I S
Sbjct: 96 VKGSTYLGKKKAVIPSSRKGVGIKS 120
>gi|61105576|gb|AAX38501.1| ribosomal protein S14 [Palaemonetes pugio]
Length = 77
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 1 MPKSPSRIRNRERK-----NIVSG-----RAHVVSTFNNTRITITDPHGN-TIAWSSPKV 49
M + E + + G H+ +++N+T + +TD G TI +
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 50 VGFSGSRKNSPFAA 63
+ ++S
Sbjct: 61 KVKADRDESSLRCY 74
>gi|170051223|ref|XP_001861668.1| 40S ribosomal protein S141 [Culex quinquefasciatus]
gi|167872545|gb|EDS35928.1| 40S ribosomal protein S141 [Culex quinquefasciatus]
Length = 101
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFSGSRKNS 59
M ++ RN E + ++FN+T + +TD G T + + + + + S
Sbjct: 21 MASCKNKTRNEE--------FSLYASFNDTFVHVTDLSGKETTSRVTGNMNAKADRDEAS 72
Query: 60 PFAAQVA 66
P +
Sbjct: 73 PRPTPLC 79
>gi|238564366|ref|XP_002385644.1| hypothetical protein MPER_16423 [Moniliophthora perniciosa FA553]
gi|215435227|gb|EEB86574.1| hypothetical protein MPER_16423 [Moniliophthora perniciosa FA553]
Length = 64
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 17 VSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKVVGFS 53
V G AH+ ++FN+T + +TD G TI+ + + +
Sbjct: 27 VFGVAHIFASFNDTFVHVTDLSGKETISRVTGGMKVKA 64
>gi|170064585|ref|XP_001867585.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881934|gb|EDS45317.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 44
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDP 37
E+ I G A+V ++FN+T + +TD
Sbjct: 7 EKVQISLGVAYVYASFNDTFVHVTDL 32
>gi|170041995|ref|XP_001848729.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167865541|gb|EDS28924.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 167
Score = 41.0 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA 74
IV G H ++FN+T + +TD G S SRK + + A
Sbjct: 108 EIVFGVTHFYASFNDTFVHVTDLFGKETISPSSAA---RRSRKKESQRCTSSCVNLVKTA 164
>gi|261333178|emb|CBH16173.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 326
Score = 41.0 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ A F + D+T NG + +
Sbjct: 277 LVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPR 322
>gi|322820735|gb|EFZ27266.1| hypothetical protein TCSYLVIO_6533 [Trypanosoma cruzi]
Length = 307
Score = 41.0 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ A F + D+T NG + +
Sbjct: 258 LVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPR 303
>gi|71748412|ref|XP_823261.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70832929|gb|EAN78433.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 326
Score = 41.0 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ A F + D+T NG + +
Sbjct: 277 LVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPR 322
>gi|71400294|ref|XP_803004.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70865529|gb|EAN81558.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 325
Score = 40.6 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ A F + D+T NG + +
Sbjct: 276 LVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPR 321
>gi|71405337|ref|XP_805295.1| hypothetical protein Tc00.1047053503555.20 [Trypanosoma cruzi
strain CL Brener]
gi|70868649|gb|EAN83444.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 325
Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 82 LEVKVSGLGAGRDSALRALR--AIGFTIVSICDVTMIAHNGCRPRK 125
L V+V G GR A+RA++ A F + D+T NG + +
Sbjct: 276 LVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPR 321
>gi|58758782|gb|AAW81784.1| ribosomal protein S11 [Polytrichastrum pallidisetum]
Length = 18
Score = 40.6 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 113 VTMIAHNGCRPRKRRRI 129
VT + HNGCRP K+RR+
Sbjct: 2 VTPMPHNGCRPPKKRRV 18
>gi|170070934|ref|XP_001869760.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167866872|gb|EDS30255.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 169
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 17/73 (23%)
Query: 64 QVATDDCSAKAQNHGMSSLEVKVSGLG--------AGRDSALRALRAIGFTIVSICDVTM 115
K + G+++L +K+ G G G SALR L I I +V
Sbjct: 13 NQLAVIGGMKVKEEGITALHIKLRGPGENRTNSLEPGHQSALRFLARSSMKIGDIKEVAP 72
Query: 116 IAHNGCRPRKRRR 128
I RRR
Sbjct: 73 I---------RRR 76
>gi|74325188|ref|YP_316608.1| ribosomal protein S11 [Thalassiosira pseudonana]
gi|74100254|gb|AAZ99415.1| ribosomal protein S11 [Thalassiosira pseudonana]
Length = 202
Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 12 ERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVG-FSGSRKNSPFAAQVATDDC 70
R+ ++S ++ + NT I + + GN + S + + P A
Sbjct: 75 NRQKLISYVININLSPTNTFINVNNIKGNPKLFYSAGMFNLQKKQKIKQPKAIITILRAL 134
Query: 71 SAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMI---AHNGCRP 123
K++ + + + L S + + + I +T HNGCR
Sbjct: 135 LIKSKIFKTKPVALHFNNLFFNHQSYI--FKRLKQK-TFIKLMTSYNYQPHNGCRL 187
>gi|71032131|ref|XP_765707.1| 40S ribosomal protein S11 [Theileria parva strain Muguga]
gi|68352664|gb|EAN33424.1| 40S ribosomal protein S11, putative [Theileria parva]
Length = 235
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 26 TFNNTRITITD--PHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLE 83
+ NN + + + T+ S VG+ + + A ++ + K + G+ +++
Sbjct: 128 SKNNVHAQLVNRSKNYRTVFGSFAGNVGYRKKMQQTDKCAYRIGENIARKCKRLGIFAVD 187
Query: 84 VKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
VK + ++ L+A AIG + + + G
Sbjct: 188 VKFRRIAR-VENVLQAFHAIGLQVSQLIHEPRLPKTGV 224
>gi|84999630|ref|XP_954536.1| 30s ribosomal protein s11 [Theileria annulata]
gi|65305534|emb|CAI73859.1| 30s ribosomal protein s11, putative [Theileria annulata]
Length = 234
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 26 TFNNTRITITD--PHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLE 83
+ NN + + + T+ S VG+ + + A ++ + K + G+ +++
Sbjct: 127 SKNNVHAQLVNRSKNYKTVFGSFAGNVGYRKKMQQTDKCAYRIGENIARKCKRLGIFAVD 186
Query: 84 VKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
VK + ++ L+A A+G + + + + G
Sbjct: 187 VKFRRIAR-VENVLQAFHALGLQVSQLIHESRLPKTGV 223
>gi|326524982|dbj|BAK04427.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 188
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 30 TRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG 88
T +T+T N + S + G + + +A + + A G+ S+ VKV G
Sbjct: 100 TFVTVTGVKENRKSGPSAGCLEDRKGRSRLAQYAGEATGEHMGQSASTIGLKSVAVKVKG 159
Query: 89 LGAGRD 94
R
Sbjct: 160 CSFYRK 165
>gi|326522951|dbj|BAJ88521.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 188
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 30 TRITITDPHGNTIAWSSPKVV-GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG 88
T +T+T N + S + G + + +A + + A G+ S+ VKV G
Sbjct: 100 TFVTVTGVKENRKSGPSAGCLEDRKGRSRLAQYAGEATGEHMGQSASTIGLKSVAVKVKG 159
Query: 89 LGAGRD 94
R
Sbjct: 160 CSFYRK 165
>gi|226356828|ref|YP_002786568.1| glutamate dehydrogenase [Deinococcus deserti VCD115]
gi|226318818|gb|ACO46814.1| putative glutamate dehydrogenase (NAD(P)(+)) [Deinococcus deserti
VCD115]
Length = 435
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 33 TITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN---HGMSSLEVKVSGL 89
T + G T G A A+A M + V G
Sbjct: 179 TYSMNVGRTATGVVTGKPVSLGGSLGRADATGRGVFVTGAEAMKKLGMPMQGARIAVQGF 238
Query: 90 GAGRDSALRALRAIGFTIVSICDVT 114
G ++A R G IV+I DVT
Sbjct: 239 GNVGEAAARIFHEHGAKIVAIQDVT 263
>gi|326632096|gb|ADZ99050.1| ribosomal protein S11 [Physarum polycephalum]
Length = 251
Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 14 KNIVSGRAHVVSTFNNTRITIT-------DPHGNTIAWSSPKVVGFSGSRKNSPFAAQVA 66
+ GR ++ NT ITI+ + SS ++ + G ++++ A
Sbjct: 128 RFFFFGRIYLTHRRRNTFITISTIAEDKLNLDERVFFKSSCGLLEYKGPKRSTLHARLEV 187
Query: 67 TDDCSAKAQNHGMSSLEVKV-SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
C + SS+++ SG+G +RAL + + +H R +K
Sbjct: 188 AKACGSFVAQAAFSSVDIIFPSGVGRVFTRLVRALVERQIYVRYLIIPKRRSHGLTRKKK 247
Query: 126 RRRI 129
RR+
Sbjct: 248 VRRL 251
>gi|307696908|gb|ADN85909.1| ribosomal protein S11 [Leymus innovatus]
gi|307696912|gb|ADN85912.1| ribosomal protein S11 [Leymus erianthus]
gi|307696916|gb|ADN85915.1| ribosomal protein S11 [Leymus triticoides]
gi|307696920|gb|ADN85918.1| ribosomal protein S11 [Leymus arenarius]
gi|307696924|gb|ADN85921.1| ribosomal protein S11 [Leymus salinus]
gi|307696928|gb|ADN85924.1| ribosomal protein S11 [Leymus cinereus]
gi|307696932|gb|ADN85927.1| ribosomal protein S11 [Leymus pseudoracemosus]
gi|307696936|gb|ADN85930.1| ribosomal protein S11 [Leymus akmolinensis]
gi|307696940|gb|ADN85933.1| ribosomal protein S11 [Leymus karelinii]
gi|307696944|gb|ADN85936.1| ribosomal protein S11 [Leymus paboanus]
gi|307696948|gb|ADN85939.1| ribosomal protein S11 [Leymus angustus]
Length = 16
Score = 38.3 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 114 TMIAHNGCRPRKRRRI 129
T + HNGCRP K+RR+
Sbjct: 1 TPMPHNGCRPPKKRRL 16
>gi|170055379|ref|XP_001863556.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167875379|gb|EDS38762.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 139
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 45 SSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEV-KVSGLGAGRDSALRALR 101
+ + + + SP+AA +A D + K ++ G+ + + G G S RAL
Sbjct: 72 VTGNMNAKADRDEASPYAALLAAQDVADKCKSLGITLRATSGNRTKTPGPGAQSTHRALS 131
Query: 102 AIGFTIV 108
V
Sbjct: 132 CSSKNFV 138
>gi|147860911|emb|CAN78753.1| hypothetical protein VITISV_042558 [Vitis vinifera]
Length = 266
Score = 37.9 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 18 SGRAHVVSTFNNTRITITDPH 38
G HV ++FNNT T+ D
Sbjct: 27 KGLIHVQASFNNTIATVIDVE 47
>gi|15806004|ref|NP_294704.1| glutamate dehydrogenase [Deinococcus radiodurans R1]
gi|6458708|gb|AAF10557.1|AE001950_9 glutamate dehydrogenase, putative [Deinococcus radiodurans R1]
Length = 392
Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 33 TITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQN-HGM--SSLEVKVSGL 89
T + G T G A A+A GM + V G
Sbjct: 79 TYSMNVGRTATGVVTGKPVSLGGSLGRADATGRGVFVTGAEAMKKLGMPLEGARIAVQGF 138
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAH 118
G ++A R G IV+I DVT H
Sbjct: 139 GNVGEAAARIFHQHGAKIVAIQDVTGTIH 167
>gi|257453255|ref|ZP_05618554.1| 50S ribosomal protein L18P [Fusobacterium sp. 3_1_5R]
gi|257467150|ref|ZP_05631461.1| 50S ribosomal protein L18P [Fusobacterium gonidiaformans ATCC
25563]
gi|315918281|ref|ZP_07914521.1| LSU ribosomal protein L18P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059789|ref|ZP_07924274.1| LSU ribosomal protein L18P [Fusobacterium sp. 3_1_5R]
gi|313685465|gb|EFS22300.1| LSU ribosomal protein L18P [Fusobacterium sp. 3_1_5R]
gi|313692156|gb|EFS28991.1| LSU ribosomal protein L18P [Fusobacterium gonidiaformans ATCC
25563]
Length = 120
Score = 37.9 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 1 MPKSPSRIRNRERKNI----------VSGRAHVVSTFNNTRITIT-DPHGNTIAWSSPKV 49
M K +R RE+K++ R V + NN + D +G T+ +S +
Sbjct: 1 MFKKVNRASVREKKHLAIRNKISGTAERPRLSVYRSNNNIFAQLIDDVNGVTLVSASTIM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG 88
G + AA+ + KA G+ + SG
Sbjct: 61 KGMKVENGGNVEAAKAVGKAIAEKAVEKGIKEVVFDRSG 99
>gi|156085848|ref|XP_001610333.1| ribosomal protein S11 [Babesia bovis T2Bo]
gi|154797586|gb|EDO06765.1| ribosomal protein S11, putative [Babesia bovis]
Length = 219
Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 26 TFNNTRITITD--PHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLE 83
+ NN + + + T+ S VG + ++ S A ++ + K + G+ +++
Sbjct: 112 SKNNVHAQLVNRSRNYRTVFGSFAGNVGINKKQQQSERCAYRIGENMAKKCKRLGVFAVD 171
Query: 84 VKVSGLGAGR-DSALRALRAIGFTIVSICDVTMIAHNG 120
VK L R ++ L+A +A G + + + G
Sbjct: 172 VKFRRL--MRIETVLQAFQAEGLQVGQLIHEPRLPKTG 207
>gi|257463977|ref|ZP_05628362.1| 50S ribosomal protein L18P [Fusobacterium sp. D12]
gi|317061500|ref|ZP_07925985.1| LSU ribosomal protein L18P [Fusobacterium sp. D12]
gi|313687176|gb|EFS24011.1| LSU ribosomal protein L18P [Fusobacterium sp. D12]
Length = 120
Score = 37.1 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 1 MPKSPSRIRNRERKNI----------VSGRAHVVSTFNNTRITIT-DPHGNTIAWSSPKV 49
M K +R RE+K++ R V + NN + D +G T+ +S +
Sbjct: 1 MFKKVNRASVREKKHLAIRNKISGTAERPRLSVYRSNNNIFAQLIDDVNGVTLVSASTIM 60
Query: 50 VGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSG 88
G + AA+ + +A G+ + SG
Sbjct: 61 KGMKVENGGNIEAAKAVGKTIAERAAEKGIKEVVFDRSG 99
>gi|170049169|ref|XP_001854325.1| predicted protein [Culex quinquefasciatus]
gi|167871056|gb|EDS34439.1| predicted protein [Culex quinquefasciatus]
Length = 215
Score = 36.7 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 45 SSPKVVGFSGSRKNSPFAAQVATDD---CSAKAQNHGMSSLEVKV--------SGLGAGR 93
+S S +A+ + K ++ G++SL +K+ G G
Sbjct: 23 TSTPASTIPSSTLRIFWASNYLAEHRRHEGGKCKSLGITSLHMKLRAAGGTCTKTPGPGA 82
Query: 94 DSALRALRAIGFTIVSICDV 113
S LRAL IV I ++
Sbjct: 83 QSVLRALARSSMNIVKIINI 102
>gi|328873707|gb|EGG22074.1| hypothetical protein DFA_01964 [Dictyostelium fasciculatum]
Length = 405
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 10/26 (38%)
Query: 87 SGLGAGRDSALRALRAIGFTIVSICD 112
G G S LR L G I I D
Sbjct: 175 KTPGPGAQSVLRFLARSGMKIGRIED 200
>gi|170053042|ref|XP_001862495.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167873750|gb|EDS37133.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 235
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 33/114 (28%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ E + + + ++ N T + +TD G
Sbjct: 1 MASCKNKTEKEEVQIL------LYASSNGTFVHVTDLSGK-------------------- 34
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAG----RDSALRALRAIGFTIVSI 110
Q + D + K ++ G+++L +K+ +G SALRAL I I
Sbjct: 35 ---QTISRDVAEKCKSLGITALHIKLRAIGGNCTNTPRSALRALSCSSMIIFWI 85
>gi|319412284|gb|ADV41821.1| ribosomal protein S11 [Bigelowiella natans]
Length = 132
Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 6 SRIRNRERKNIVSG-RAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQ 64
R++ + K + G R + S+ N R+ I + S + ++G + AA
Sbjct: 8 KRVKLKPVKAPLMGSRIVLHSSKNTCRMFIVKEGRLVLYTSVKRSSIYTGYERRLWIAAY 67
Query: 65 VATDDCSAKAQNHG-MSS--LEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGC 121
+AQ + + E+ + G + A+ GF + ++ A NGC
Sbjct: 68 TTALHFGREAQKRKDIRNTKFELYLKGS---QKHAVAGFLDSGFVFTKVKEIKNPAFNGC 124
Query: 122 RPRKRRRI 129
+K RR+
Sbjct: 125 FSKKSRRL 132
>gi|83273502|ref|XP_729427.1| 40s ribosomal protein s14 [Plasmodium yoelii yoelii str. 17XNL]
gi|23487183|gb|EAA20992.1| 40s ribosomal protein s14 (fragment). [common tobacco]-related
[Plasmodium yoelii yoelii]
Length = 51
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 11/23 (47%)
Query: 95 SALRALRAIGFTIVSICDVTMIA 117
S RAL G I I DVT I
Sbjct: 14 STYRALARSGLKIGRIEDVTPIP 36
>gi|332041571|gb|EGI77931.1| glutamate dehydrogenase (NAD(P)(+)) [Hylemonella gracilis ATCC
19624]
Length = 432
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSI 110
G G R + V + + M V V G G ++A R + G +IV+I
Sbjct: 197 GSLGRRDATGRGCFVVAREAMQR-LGMEMKGARVAVQGFGNVGNAAARVFQENGASIVAI 255
Query: 111 CDV 113
DV
Sbjct: 256 QDV 258
>gi|170045351|ref|XP_001850276.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167868272|gb|EDS31655.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 50
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 15 NIVSGRAHVVSTFNNTRITITDPHG 39
I G A+V ++FN+T + + D G
Sbjct: 25 EIGFGVAYVYASFNDTFVHVMDLLG 49
>gi|1171606|emb|CAA64590.1| rps11 [Plasmodium falciparum]
Length = 132
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 21 AHVVSTFNNTRITITDPHGN---------TIAWSSPKVVGFSGSRKNSPFAAQVATDDCS 71
+ T NT ITI+ N S F KN+ A + T +
Sbjct: 11 LYFKLTLKNTLITISKYKYNNNKYIYIKNIKNISCGCFKYFKNRLKNTILANNILTINII 70
Query: 72 AKAQNHGMSSLEVKVSGLGAGRDSALRA-----LRAIGFTIVSICDVTMIAHNGCRPRKR 126
N ++ + +G+ R L+ + I + D+T I +NGC+ KR
Sbjct: 71 KYLINKNYLNINIIFNGINYYRIHILKLLLNVKYKNKKLNINKLFDITSIPYNGCKYSKR 130
Query: 127 R 127
+
Sbjct: 131 K 131
>gi|262401163|gb|ACY66484.1| putative 40S ribosomal protein RPS14 [Scylla paramamosain]
Length = 123
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGM--SSLEV------KVSGLGAGRDSALRALRA 102
G +G +SP +A D K + G+ +++ K G G +L AL
Sbjct: 34 GKAGLYDSSPSGGFLAPQDVFEKCKILGIPGRPIKIRSPGGNKTKTPGPGGHFSLPALAR 93
Query: 103 IGFTIVSICDVTMIA------HNGCRPR 124
I DVT I G R R
Sbjct: 94 PPLKIGRFGDVTPIPSDPPPRKGGPRAR 121
>gi|270010115|gb|EFA06563.1| hypothetical protein TcasGA2_TC009474 [Tribolium castaneum]
Length = 944
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Query: 13 RKNIVSGRAHVVSTFNNTRITITDPHGNTIAW----SSPKVVGFSGSRKNSPFAAQVATD 68
++ H+ +++ IT+ + + K +++
Sbjct: 285 KRKNPVFVIHIKCPYSDIDITLEPAKTLVFFRKIDLVKRCLQKMISTFKGGD--SEIVAK 342
Query: 69 DCSAKAQNHGMSSLEVKVSGLGAGRDS 95
G+S + V G G R S
Sbjct: 343 KTHRPLSEFGVSQIGGAVKGFGTKRKS 369
>gi|260891578|ref|ZP_05902841.1| hypothetical protein GCWU000323_02793 [Leptotrichia hofstadii
F0254]
gi|260858686|gb|EEX73186.1| ribosomal protein L18 [Leptotrichia hofstadii F0254]
Length = 120
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITIT-DPHGNTIAWSSPKVVGFSGSRKNSPF 61
K IR + R V + N + + D GNT+ +S G + ++
Sbjct: 13 KKHRSIRKKIVGTAERPRLAVYRSLQNIFVQVIDDTTGNTLVSASTIEKGAKIEKGSNIE 72
Query: 62 AAQVATDDCSAKAQNHGMSSLEV 84
AA+ + + KA + G++++
Sbjct: 73 AAKQIGERIAKKALDKGITTVVF 95
>gi|302555755|ref|ZP_07308097.1| sensor kinase [Streptomyces viridochromogenes DSM 40736]
gi|302473373|gb|EFL36466.1| sensor kinase [Streptomyces viridochromogenes DSM 40736]
Length = 317
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 9/74 (12%)
Query: 57 KNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGLGAGRDSA-LRALRAIGFTI 107
+ + A A A + + V G G R+ A +R +R +
Sbjct: 231 RVAQEALTNAARHAEAGRVEVSLRHTDGTVVLAVADDGRGTGIAREGAGIRGMRERALLL 290
Query: 108 VSICDVTMIAHNGC 121
+ DVT H G
Sbjct: 291 GATLDVTSQPHTGT 304
>gi|327312621|ref|YP_004328058.1| putative endo-beta-N-acetylglucosaminidase F1 [Prevotella denticola
F0289]
gi|326944952|gb|AEA20837.1| putative endo-beta-N-acetylglucosaminidase F1 [Prevotella denticola
F0289]
Length = 452
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 27 FNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV 86
+N T T + ++ S +G+ K+S + +A + +G+ ++ + V
Sbjct: 94 YNKTHGTAFEALPESLVTVSGGATVNAGATKSSKV---TVSYTTAADLKENGVYAIPLIV 150
Query: 87 SGLGAGRDSALRALRAIGFTIVSICDVTMIA 117
G A RA + G ++ + D+T +
Sbjct: 151 KG-------ASRASKDKGEFVLFVRDITKMP 174
>gi|257125052|ref|YP_003163166.1| ribosomal protein L18 [Leptotrichia buccalis C-1013-b]
gi|257048991|gb|ACV38175.1| ribosomal protein L18 [Leptotrichia buccalis C-1013-b]
Length = 120
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 3 KSPSRIRNRERKNIVSGRAHVVSTFNNTRITIT-DPHGNTIAWSSPKVVGFSGSRKNSPF 61
K IR + R V + N + + D GNT+ +S G ++
Sbjct: 13 KKHRSIRKKIVGTAERPRLAVYRSLQNIFVQVIDDTTGNTLVSASTIEKGAKIENGSNIE 72
Query: 62 AAQVATDDCSAKAQNHGMSSLEV 84
AA+ + + KA + G++++
Sbjct: 73 AAKQIGERIAKKALDKGITTVVF 95
>gi|254445133|ref|ZP_05058609.1| Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family
[Verrucomicrobiae bacterium DG1235]
gi|198259441|gb|EDY83749.1| Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family
[Verrucomicrobiae bacterium DG1235]
Length = 420
Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 51 GFSGSRKNSPFAAQVATDDCSAKAQNHGMSS--LEVKVSGLGA-GRDSALRALRAIGFTI 107
G G ++ + F + ++ G+ + G G G ++A +AL G +
Sbjct: 185 GSEGRKEATGFG---VAYFAKSYLEDFGIKPSNATAVIQGFGNVGSEAA-KALVNFGVKV 240
Query: 108 VSICDVTMIAHN 119
+ I DV+ HN
Sbjct: 241 IGISDVSGAYHN 252
>gi|148264552|ref|YP_001231258.1| DNA polymerase III, alpha subunit [Geobacter uraniireducens Rf4]
gi|146398052|gb|ABQ26685.1| DNA polymerase III, alpha subunit [Geobacter uraniireducens Rf4]
Length = 1157
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Query: 56 RKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTM 115
++ + D A++HG+ +G GR SA A + ++I I D+
Sbjct: 344 KQMGFPGYFLIVADFINWAKDHGI--------PVGPGRGSA--AGSLVAYSI-RITDIDP 392
Query: 116 IAHN 119
I +N
Sbjct: 393 IPYN 396
>gi|170051291|ref|XP_001861698.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872635|gb|EDS36018.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 173
Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 39 GNTIAW-SSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--------SGL 89
G W S+ + VA K ++ G+++L +K+
Sbjct: 89 GQVTIWRSTGAALRSRLIMTRLALRCYVAALYVGGKCKSLGITALHMKLRAAGENCTKTA 148
Query: 90 GAGRDSALRALRAIGFTIVSI 110
G G S LRAL IV I
Sbjct: 149 GPGAQSVLRALARSSMNIVKI 169
>gi|330429795|gb|AEC21129.1| glutamate dehydrogenase [Pusillimonas sp. T7-7]
Length = 429
Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Query: 33 TITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKA-QNHGM--SSLEVKVSGL 89
T + G T G A +A + G+ + + G
Sbjct: 173 TYSMNEGATTTGVVTGKPVSLGGSLGRVEATGRGVFVVGREAAHDAGIPIEGARIVIQGF 232
Query: 90 GAGRDSALRALRAIGFTIVSICDVTMIAHN 119
G +A R G +++I D T HN
Sbjct: 233 GNVGGTAARLFYEAGAKVIAIQDHTGCVHN 262
>gi|209892892|ref|YP_002290865.1| rps11 [Babesia bovis T2Bo]
gi|154795901|gb|EDO05085.1| rps11 [Babesia bovis]
Length = 158
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 17/122 (13%)
Query: 23 VVSTFNNTRIT-------------ITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDD 69
+ FNN IT +T + + RK S +
Sbjct: 35 IFFKFNNVFITSSKFKRYGNIFIFLTILKSLSCGQFIKTCTSYGKVRKLSIITLNKLINK 94
Query: 70 CSAKAQNHGMSSLEVKVSGLGAGRDS----ALRALRAIGFTIVSICDVTMIAHNGCRPRK 125
+++ + + + L+ G + +I V +NGCR +K
Sbjct: 95 FMLFLVYSKSNNINIVFKNKSYYKKTLLFLFLKFNNIKGIKLRTISHVINYPYNGCRLKK 154
Query: 126 RR 127
R+
Sbjct: 155 RK 156
>gi|13161389|dbj|BAB32980.1| ribosomal protein S14 [Xenopus laevis]
Length = 37
Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 17 VSGRAHVVSTFNNTRITI 34
V G H+ ++FN+T + +
Sbjct: 20 VFGVCHIFASFNDTFVHV 37
>gi|327400957|ref|YP_004341796.1| 6,7-dimethyl-8-ribityllumazine synthase [Archaeoglobus veneficus
SNP6]
gi|327316465|gb|AEA47081.1| 6,7-dimethyl-8-ribityllumazine synthase [Archaeoglobus veneficus
SNP6]
Length = 175
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 10/66 (15%)
Query: 57 KNSPFAAQVATDDCSAKAQNHGM---SSLEVKVSGLGAGRDSAL-------RALRAIGFT 106
+ +V + K + G+ + + +SG G GR +A RA+ A
Sbjct: 104 EGETEHDEVVAQHAARKIMDLGLEYNKPVTLGISGPGMGRLAAHQRIDYAKRAVEAAVKL 163
Query: 107 IVSICD 112
+ + D
Sbjct: 164 VRRLKD 169
>gi|170048468|ref|XP_001852957.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
gi|167870583|gb|EDS33966.1| 40S ribosomal protein S14 [Culex quinquefasciatus]
Length = 80
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHG-NTIAWSSPKV 49
M ++ E + ++FN+T + +TD G TI+ + +
Sbjct: 39 MASCKNKTIKEE--------FSLYASFNDTFVHVTDLSGKETISLVTGGM 80
>gi|323307573|gb|EGA60842.1| Mrps18p [Saccharomyces cerevisiae FostersO]
Length = 141
Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 11 RERKNIVSGRAHVVSTFNNTRITIT 35
+ ++ +V H T NNT +T +
Sbjct: 68 KPKEEVVKYILHGKFTKNNTHLTFS 92
>gi|328955870|ref|YP_004373203.1| aldo/keto reductase [Coriobacterium glomerans PW2]
gi|328456194|gb|AEB07388.1| aldo/keto reductase [Coriobacterium glomerans PW2]
Length = 416
Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 67 TDDCSAKAQNHGMSSLEVKVSGLGAGRDSAL-RALRAIGFTIVSICDVTMIAHNGCRPR 124
+ A+A G++ L+ L G ++ + AL+ +G I T + H CR
Sbjct: 36 AEAIIARAHERGINYLDTAY--LYPGNEACVGAALQRLGLRDAMIV-ATKLPHGSCRRP 91
>gi|170067049|ref|XP_001868326.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
gi|167863187|gb|EDS26570.1| 40S ribosomal protein S14-A [Culex quinquefasciatus]
Length = 89
Score = 33.6 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 37/114 (32%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M ++ E + + + ++ N T + +TD G
Sbjct: 1 MASCKNKTEKEEVQIL------LYASSNGTFVHVTDLSGK-------------------- 34
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLG------AGRDSALRALRAIGFTIV 108
Q + D + K ++ G+++L +K+ +G G SALRAL IV
Sbjct: 35 ---QTISRDVTEKCKSLGITALHIKLRAIGGNCTNTPG--SALRALSCSSMIIV 83
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.315 0.159 0.546
Lambda K H
0.267 0.0484 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,493,943,595
Number of Sequences: 13984884
Number of extensions: 59449415
Number of successful extensions: 218677
Number of sequences better than 10.0: 2537
Number of HSP's better than 10.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 214613
Number of HSP's gapped (non-prelim): 2588
length of query: 129
length of database: 4,792,584,752
effective HSP length: 95
effective length of query: 34
effective length of database: 3,464,020,772
effective search space: 117776706248
effective search space used: 117776706248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 76 (33.6 bits)