HHsearch alignment for GI: 254780239 and conserved domain: COG0266
>COG0266 Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].
Probab=94.13 E-value=0.068 Score=33.28 Aligned_cols=51 Identities=24% Similarity=0.393 Sum_probs=42.8
Q ss_pred CCCEEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 985766643---120071768999999980888212002279899999998612
Q gi|254780239|r 11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 (122)
Q Consensus 11 ~~K~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~ 61 (122)
T Consensus 154 ~~~~IK~~LLDQ~vvaGvGNIYa~E~Lf~agI~P~~~a~~l~~~~~~~l~~~i~ 207 (273)
T COG0266 154 KKRRIKTALLDQKVVAGVGNIYADEILFRAGIHPARPAGDLSLAQLALLHEAIK 207 (273)
T ss_pred CCCCHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 764167776407703034178888899873798546703027899999999999