HHsearch alignment of GI: 254780239 and MMDB domain: 1mu5_A_230-311

>1mu5_A (A:230-311) Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae}
Probab=97.03  E-value=0.00055  Score=45.84  Aligned_cols=43  Identities=19%  Similarity=0.404  Sum_probs=39.5

Q ss_pred             EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf             1200717689999999808882120022798999999986124
Q gi|254780239|r   20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ   62 (122)
Q Consensus        20 t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~   62 (122)
                      +.+-|||..+|..||..+||+|++++++|+++|+..|-+.+.+
T Consensus        32 ~~~~GiGn~~a~EiL~~agi~P~~~~~~Ls~~e~~~L~~~~~~   74 (82)
T 1mu5_A           32 NEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK   74 (82)
T ss_dssp             TSSSSCCHHHHHHHHHHTTCCTTSBGGGCCTTHHHHHHHHHHH
T ss_pred             HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             6515557689999999718996667565999999999999986