HHsearch alignment of GI: 254780239 and MMDB domain: 1mu5_A_230-311
>1mu5_A (A:230-311) Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae}
Probab=97.03 E-value=0.00055 Score=45.84 Aligned_cols=43 Identities=19% Similarity=0.404 Sum_probs=39.5
Q ss_pred EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 1200717689999999808882120022798999999986124
Q gi|254780239|r 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 (122)
Q Consensus 20 t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~ 62 (122)
+.+-|||..+|..||..+||+|++++++|+++|+..|-+.+.+
T Consensus 32 ~~~~GiGn~~a~EiL~~agi~P~~~~~~Ls~~e~~~L~~~~~~ 74 (82)
T 1mu5_A 32 NEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 74 (82)
T ss_dssp TSSSSCCHHHHHHHHHHTTCCTTSBGGGCCTTHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6515557689999999718996667565999999999999986