HHsearch results for GI: 254780239 and protein with PDBid: 3ofp_M
>3ofp_M 30S ribosomal protein S13; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_M* 2wwl_M 2qal_M* 1p6g_M 1p87_M 2aw7_M 2avy_M 2i2u_M 2i2p_M* 2qan_M* 2qb9_M* 2qbb_M* 2qbd_M 2qbf_M 2qbh_M* 2qbj_M* 2qou_M* 2qow_M* 2qoy_M* 2qp0_M* ...
Probab=100.00 E-value=2.2e-43 Score=289.50 Aligned_cols=113 Identities=56% Similarity=0.875 Sum_probs=109.5
Q ss_pred CEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 45516758998576664312007176899999998088821200227989999999861245643337889999999999
Q gi|254780239|r 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 (122)
Q Consensus 2 vrI~g~~i~~~K~i~~aLt~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~~~~i~~~L~~~~~~~i~rl 81 (122)
+||+|+|||++|+|++|||+|||||+++|.+||+++||||++++++||++|++.|+++|+ +|.+|+||++.+.+||+||
T Consensus 1 aRI~g~dip~~K~v~~ALt~I~GIG~~~A~~Ic~~lgi~~~~rv~~Lt~~qi~~l~~~i~-~~~i~~~L~~~~~~~I~rl 79 (113)
T 3ofp_M 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVEGDLRREISMSIKRL 79 (113)
T ss_dssp CCTTSSCCCCCCCHHHHHTSSSSCCSSHHHHGGGTTTCCSSCCSSSCCTTSSTTTHHHHH-SSCCHHHHHHHTTTHHHHG
T ss_pred CEECCCCCCCCCEEEEEEECEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
T ss_conf 902686699997866550143474899999999984989874048599999999999986-1031025899999979999
Q ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7303100123317987877077877657777665
Q gi|254780239|r 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 (122)
Q Consensus 82 ~~i~syrG~RH~~gLpvRGQRT~tn~rt~k~~~~ 115 (122)
++|+||||+||.+|||||||||||||||+|+.++
T Consensus 80 ~~i~~yRG~RH~~gLpvRGQrT~tnart~k~~~k 113 (113)
T 3ofp_M 80 MDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 113 (113)
T ss_dssp GGSSCSTTTTTTTSSCSSSCCSSSCCSSSSCSCC
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8851042111226998887778777524588998