HHSEARCH alignment of GI: 254780239 and SCOP domain: d1r2za1

Alignment
>d1r2za1 a.156.1.2 (A:135-228) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.68  E-value=0.00098  Score=41.88  Aligned_cols=51  Identities=18%  Similarity=0.251  Sum_probs=43.6

Q ss_pred             CCCEEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf             985766643---120071768999999980888212002279899999998612
Q gi|254780239|r   11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE   61 (122)
Q Consensus        11 ~~K~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~   61 (122)
                      .+.+|.-+|   +.+-|||...+..||..++|+|..++++|+++|+..|-+.+.
T Consensus        21 ~~~~ik~~LlDQ~~~aGiGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~L~~~~~   74 (94)
T d1r2za1          21 TKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMV   74 (94)
T ss_dssp             CCSBHHHHHHCTTTSSSCCHHHHHHHHHHHTCCTTSBGGGCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             886289999836545786508999999999726641497866779999999999


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Middle domain of MutM-like DNA repair proteins
domain: DNA repair protein MutM (Fpg)
species: Bacillus stearothermophilus [TaxId: 1422]