HHSEARCH alignment of GI: 254780239 and SCOP domain: d1tdza1

Alignment
>d1tdza1 a.156.1.2 (A:132-219) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=96.64  E-value=0.001  Score=41.73  Aligned_cols=49  Identities=24%  Similarity=0.382  Sum_probs=41.5

Q ss_pred             CEEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf             5766643---120071768999999980888212002279899999998612
Q gi|254780239|r   13 KRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE   61 (122)
Q Consensus        13 K~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~   61 (122)
                      ++|.-+|   +.|-|||...|..||..++|+|+.++.+|+++|+..|-+.+.
T Consensus        23 ~~ik~~LldQ~~iaGIGNiy~~EiLf~a~I~P~~~~~~Ls~~~~~~L~~~i~   74 (88)
T d1tdza1          23 KKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSII   74 (88)
T ss_dssp             SBHHHHHHTSSSSSCCCHHHHHHHHHHTTCCTTCBGGGCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH
T ss_conf             5089999855434785768999999999758256465769999999999999


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Middle domain of MutM-like DNA repair proteins
domain: DNA repair protein MutM (Fpg)
species: Lactococcus lactis [TaxId: 1358]