PSIBLAST alignment of GI: 254780239 and protein with PDB id: 1vs5
gi|116666560|pdb|1VS5|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 118
>gi|116666612|pdb|1VS7|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 118
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
MARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R +
Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60
Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
+ VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K
Sbjct: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116