HHsearch alignment for GI: 254780240 and conserved domain: COG1219

>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=96.02  E-value=0.0078  Score=38.49  Aligned_cols=27  Identities=48%  Similarity=0.757  Sum_probs=25.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCE
Q ss_conf             699987889996789999999718948
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKLNVPQ   28 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~~~~~   28 (201)
T Consensus        99 NILLiGPTGsGKTlLAqTLAk~LnVPF  125 (408)
T COG1219          99 NILLIGPTGSGKTLLAQTLAKILNVPF  125 (408)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHCCCE
T ss_conf             179988899757799999999848984