HHsearch alignment for GI: 254780240 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=96.59 E-value=0.0034 Score=40.72 Aligned_cols=42 Identities=31% Similarity=0.641 Sum_probs=32.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEE--CHHHHHHHHHHHHH
Q ss_conf 6999878899967899999997189489--57899999996001
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKLNVPQL--STGDMLRAEVDRNT 43 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~~~~~i--s~gdllR~~~~~~s 43 (201)
T Consensus 153 nVLFyGppGTGKTm~Akalane~kvp~l~vkat~liGehVGdga 196 (368)
T COG1223 153 NVLFYGPPGTGKTMMAKALANEAKVPLLLVKATELIGEHVGDGA 196 (368)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHH
T ss_conf 16877899964879999872545785487116888887743598