HHsearch alignment for GI: 254780240 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].

Probab=96.91  E-value=0.00086  Score=44.49  Aligned_cols=37  Identities=32%  Similarity=0.648  Sum_probs=29.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHC----CCEECHHHHHHHHH
Q ss_conf             99987889996789999999718----94895789999999
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLN----VPQLSTGDMLRAEV   39 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~----~~~is~gdllR~~~   39 (201)
T Consensus        68 iLi~GppgTGKTAlA~gIa~eLG~dvPF~~isgsEiYS~E~  108 (450)
T COG1224          68 ILIVGPPGTGKTALAMGIARELGEDVPFVAISGSEIYSLEV  108 (450)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECC
T ss_conf             99978999768899999999858999821501332233100