HHsearch alignment for GI: 254780240 and conserved domain: COG4088
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism].
Probab=98.19 E-value=7.1e-06 Score=57.54 Aligned_cols=109 Identities=27% Similarity=0.284 Sum_probs=53.5
Q ss_pred CE-EEEECCCCCCHHHHHHHHHHHH-----CCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
Q ss_conf 96-9998788999678999999971-----89489578999999960014566667764134455410356655542023
Q gi|254780240|r 1 MR-IIFLGPPGSGKGTQACRLSQKL-----NVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRL 74 (201)
Q Consensus 1 m~-I~i~G~PGsGK~T~a~~la~~~-----~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~ 74 (201)
T Consensus 1 mpLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k-dy~~~i~-~DEslpi~ke~yres----~~ks~~rlldSalk- 73 (261)
T COG4088 1 MPLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK-DYLRGIL-WDESLPILKEVYRES----FLKSVERLLDSALK- 73 (261)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCH-HHHHHEE-CCCCCCHHHHHHHHH----HHHHHHHHHHHHHC-
T ss_conf 9569982699988017899999999972001121320-1454123-313240379999999----98889999999863-
Q ss_pred CCCCCEEEE-C------CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 222531786-3------8011124578887666531252221035554221256642331
Q gi|254780240|r 75 PDCDSGFIL-D------GYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVR 127 (201)
Q Consensus 75 ~~~~~g~il-D------GFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R 127 (201)
T Consensus 74 ----n~~VIvDdtNYyksmRrqL~------ceak~~-~tt~ciIyl~~plDtc~rrN~er 122 (261)
T COG4088 74 ----NYLVIVDDTNYYKSMRRQLA------CEAKER-KTTWCIIYLRTPLDTCLRRNRER 122 (261)
T ss_pred ----CEEEEEECCCHHHHHHHHHH------HHHHHC-CCCEEEEEECCCHHHHHHHHCCC
T ss_conf ----64999706328889999999------999863-78659999726889998860247