HHsearch alignment for GI: 254780240 and conserved domain: COG5635

>COG5635 Predicted NTPase (NACHT family) [Signal transduction mechanisms].
Probab=94.63  E-value=0.028  Score=35.03  Aligned_cols=25  Identities=44%  Similarity=0.647  Sum_probs=20.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf             6999878899967899999997189
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKLNV   26 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~~~   26 (201)
T Consensus       224 ~~~Ilg~pGsGKTtfl~~lA~~~~~  248 (824)
T COG5635         224 KLLILGAPGSGKTTFLQRLALWLAQ  248 (824)
T ss_pred             HEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             3334468887626799999999741