HHsearch alignment for GI: 254780240 and conserved domain: PRK00625
>PRK00625 shikimate kinase; Provisional.
Probab=99.31 E-value=1e-11 Score=94.22 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=89.6
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 969998788999678999999971894895789999999600145666677641-3445541035665554202322253
Q gi|254780240|r 1 MRIIFLGPPGSGKGTQACRLSQKLNVPQLSTGDMLRAEVDRNTLLGKQVKGSME-SGSLISDAIVNQVVCDRIRLPDCDS 79 (201)
Q Consensus 1 m~I~i~G~PGsGK~T~a~~la~~~~~~~is~gdllR~~~~~~s~~g~~i~~~l~-~G~lvpd~ii~~li~~~l~~~~~~~ 79 (201)
T Consensus 1 MnI~LIG~mGsGKStiGk~LA~~l~~~FvD~D~~Ie~~~~--~~i~~Si~eIf~~~GE~~FR~~E~~~l~-~l~---~~~ 74 (173)
T PRK00625 1 MQIFLCGLPTVGKTSFGKALAKFLSLPFFDTDDLIVSNYH--GALYSSPKEIYQAYGEEGFCEEEALALE-SLP---VIP 74 (173)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHC--CCCCCCHHHHHHHHCHHHHHHHHHHHHH-HHC---CCC
T ss_conf 9299989999988999999999939995774999999868--6523569999997189999999999999-732---489
Q ss_pred EEEE--CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1786--38011124578887666531252221035554221256642331123233345565678989999999999997
Q gi|254780240|r 80 GFIL--DGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLKRIENYRKT 157 (201)
Q Consensus 80 g~il--DGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~Rl~~y~~~ 157 (201)
T Consensus 75 ~VIstGGG~v~~~~n~~~L----k~----~g~vV~L~~~~e~i~~Rl~~rpl~~~~----~~~~~l~~l~~eR~~lY~~~ 142 (173)
T PRK00625 75 SIVALGGGTLMHEESYDHI----RN----RGLLVLLSLPIATIYQRLQKRGLPERL----KKTPSLEEILTQRIDRMREI 142 (173)
T ss_pred CEEECCCCCCCCHHHHHHH----HH----CCEEEEEECCHHHHHHHHHCCCCCCCC----CCHHHHHHHHHHHHHHHHHH
T ss_conf 6897488501789999999----96----899999839999999998269987778----83579999999999999997
Q ss_pred HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 5699999996797999938998899999999999
Q gi|254780240|r 158 ILPLSSYYRDMGCLYIIDGMLDMDEVSRSIDSLL 191 (201)
Q Consensus 158 ~~pv~~~y~~~~~l~~Idg~~~~~eV~~~I~~~l 191 (201)
T Consensus 143 AD~iI~-----~d~~sit~~~~~~~~~~~~~~~~ 171 (173)
T PRK00625 143 ADYIFS-----LDHVALTSESSLMSACQSFCTLL 171 (173)
T ss_pred CCEEEE-----CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 999996-----89976132544999999999997