HHsearch alignment for GI: 254780240 and conserved domain: PRK03992
>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=97.37 E-value=0.00018 Score=48.77 Aligned_cols=35 Identities=23% Similarity=0.539 Sum_probs=28.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCE--ECHHHHHHH
Q ss_conf 99987889996789999999718948--957899999
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQ--LSTGDMLRA 37 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~--is~gdllR~ 37 (201)
T Consensus 169 vLLyGPPGtGKTllAkAvA~e~~~~fi~v~~s~l~sk 205 (390)
T PRK03992 169 VLLYGPPGTGKTLLAKAVAHETNATFIRVVGSELVQK 205 (390)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf 7868989997899999999874888799667997524