HHsearch alignment for GI: 254780240 and conserved domain: PRK04040

Probab=99.09  E-value=1e-08  Score=75.43  Aligned_cols=165  Identities=16%  Similarity=0.208  Sum_probs=90.5

Q ss_pred             CE-EEEECCCCCCHHHHHHHHHHHH--CCCEECHHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCHHHHH---HHHHHH
Q ss_conf             96-9998788999678999999971--8948957899999996001--45666677641344554103566---555420
Q gi|254780240|r    1 MR-IIFLGPPGSGKGTQACRLSQKL--NVPQLSTGDMLRAEVDRNT--LLGKQVKGSMESGSLISDAIVNQ---VVCDRI   72 (201)
Q Consensus         1 m~-I~i~G~PGsGK~T~a~~la~~~--~~~~is~gdllR~~~~~~s--~~g~~i~~~l~~G~lvpd~ii~~---li~~~l   72 (201)
T Consensus         2 ~k~VvvtGiPGvGKTTv~~~~~~~l~~~~~~vn~G~~M~e~A~~~glv~~RDemR------kL-~~~~q~~lQ~~Aa~~I   74 (189)
T PRK04040          2 MKVVVVTGVPGVGKTTVLNKALEKLKEDYKIVNFGDVMLEVAKEEGLVEHRDEMR------KL-PLEEQKELQREAAERI   74 (189)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCHHHHC------CC-CHHHHHHHHHHHHHHH
T ss_conf             4189997589887899999999972358759867799999999817734778874------79-9999999999999999


Q ss_pred             CCCCCC--------------CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             232225--------------317863801112457888766653125222103555422125664233112323334556
Q gi|254780240|r   73 RLPDCD--------------SGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSV  138 (201)
Q Consensus        73 ~~~~~~--------------~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~  138 (201)
T Consensus        75 ~~~~~~~~ViIDTHa~Iktp~Gy-lpGLP~~Vl~~-----------L~P~~ivlieA~P~eIl~RR~~---D~----tR~  135 (189)
T PRK04040         75 AEMAGEGPVIVDTHATIKTPGGY-LPGLPEWVLEE-----------LNPDVIVLIEADPDEILMRRLR---DP----TRR  135 (189)
T ss_pred             HHHCCCCCEEEECCCCCCCCCCC-CCCCCHHHHHH-----------CCCCEEEEEECCHHHHHHHHHC---CC----CCC
T ss_conf             98357872899445200268867-78998999986-----------6998899997588999998842---55----668


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             567898999999999999756999999967979999389988999999999999
Q gi|254780240|r  139 RSDDKYDVFLKRIENYRKTILPLSSYYRDMGCLYIIDGMLDMDEVSRSIDSLLV  192 (201)
Q Consensus       139 R~DD~~e~i~~Rl~~y~~~~~pv~~~y~~~~~l~~Idg~~~~~eV~~~I~~~l~  192 (201)
T Consensus       136 RD~es~~~I~~hq~~-nR~~a~ayavltga~Vkiv~N~e~~~e~Aa~~iv~~l~  188 (189)
T PRK04040        136 RDVETEESIEEHQEM-NRAAAMAYAVLTGATVKIVENHEGLLEEAAEEIVEVLR  188 (189)
T ss_pred             CCCCCHHHHHHHHHH-HHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             987889999999999-99999999997398489997899988999999999861