HHsearch alignment for GI: 254780240 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.10 E-value=0.0011 Score=43.96 Aligned_cols=108 Identities=18% Similarity=0.254 Sum_probs=49.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEECHHHHH-----HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC-
Q ss_conf 999878899967899999997189489578999-----99996001456666776413445541035665554202322-
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGDML-----RAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLPD- 76 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gdll-----R~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~~~- 76 (201)
T Consensus 41 YLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC~~I~~g~h~--DviE-Idaasn~gIDeIReLi-e~~~~~P~ 116 (613)
T PRK05896 41 YIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVCESINTNQSV--DIVE-LDAASNNGVDEIRNII-DNINYLPT 116 (613)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC--CEEE-EECCCCCCHHHHHHHH-HHHCCCCC
T ss_conf 775589984889999999999669999999988888789998569999--8688-4065557889999999-97085875
Q ss_pred --CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf --2531786380111245788876665312522210355542
Q gi|254780240|r 77 --CDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVE 116 (201)
Q Consensus 77 --~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~ 116 (201)
T Consensus 117 ~gkyKV~IIDEah~Ln~~--AaNALLKtLEEPP~~viFIL~T 156 (613)
T PRK05896 117 TFKYKVYIIDEAHMLSTS--AWNALLKTLEEPPKHVVFIFAT 156 (613)
T ss_pred CCCCEEEEECCHHHCCHH--HHHHHHHHCCCCCCCCEEEEEE
T ss_conf 799459998162217999--9999998534898783799982