HHsearch alignment for GI: 254780240 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=97.57  E-value=0.00033  Score=47.10  Aligned_cols=58  Identities=24%  Similarity=0.305  Sum_probs=38.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHH-----HCCCEECHHHHHHHHHHH--HHHHHHHHHHHHHCCCCC
Q ss_conf             6999878899967899999997-----189489578999999960--014566667764134455
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQK-----LNVPQLSTGDMLRAEVDR--NTLLGKQVKGSMESGSLI   59 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~-----~~~~~is~gdllR~~~~~--~s~~g~~i~~~l~~G~lv   59 (201)
T Consensus       100 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~g~~~~~~~~l~~~dLLI  164 (254)
T PRK06526        100 NVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAAAHHAGRLQDELVKLGRIPLLI  164 (254)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
T ss_conf             78998999986899999999999986996799877999999999885580999999851368776