HHsearch alignment for GI: 254780240 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=97.57 E-value=0.00033 Score=47.10 Aligned_cols=58 Identities=24% Similarity=0.305 Sum_probs=38.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHH-----HCCCEECHHHHHHHHHHH--HHHHHHHHHHHHHCCCCC
Q ss_conf 6999878899967899999997-----189489578999999960--014566667764134455
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQK-----LNVPQLSTGDMLRAEVDR--NTLLGKQVKGSMESGSLI 59 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~-----~~~~~is~gdllR~~~~~--~s~~g~~i~~~l~~G~lv 59 (201)
T Consensus 100 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~g~~~~~~~~l~~~dLLI 164 (254)
T PRK06526 100 NVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAAAHHAGRLQDELVKLGRIPLLI 164 (254)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
T ss_conf 78998999986899999999999986996799877999999999885580999999851368776