HHsearch alignment for GI: 254780240 and conserved domain: PRK06872
>PRK06872 DNA polymerase III subunits gamma and tau; Provisional.
Probab=95.65 E-value=0.023 Score=35.55 Aligned_cols=108 Identities=14% Similarity=0.213 Sum_probs=51.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEE----CHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC-
Q ss_conf 999878899967899999997189489----578999-99996001456666776413445541035665554202322-
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQL----STGDML-RAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLPD- 76 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~i----s~gdll-R~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~~~- 76 (201)
T Consensus 41 ylf~g~rg~gktt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~d-~~-e-idaas~~~v~~~r~l~~~-~~~~p~ 116 (696)
T PRK06872 41 YLFSGTRGVGKTSIARLFAKGLNCVHGVTATPCGECENCKAIEEGNFID-LI-E-IDAASRTKVEDTRELLDN-VQYKPV 116 (696)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCC-EE-E-EECCCCCCHHHHHHHHHH-CCCCCC
T ss_conf 7511789888889999999986789999999788862257674478775-46-7-505655788999999984-545776
Q ss_pred -C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf -2-531786380111245788876665312522210355542
Q gi|254780240|r 77 -C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVE 116 (201)
Q Consensus 77 -~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~ 116 (201)
T Consensus 117 ~~~~kvy~idev--hmls~~~fnallktleepp~~v~f~lat 156 (696)
T PRK06872 117 VGRFKVYLIDEV--HMLSRHSFNALLKTLEEPPEYVKFLLAT 156 (696)
T ss_pred CCCEEEEEEEHH--HHCCHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 775479997005--4438999999987502797544899843