HHsearch alignment for GI: 254780240 and conserved domain: PRK08533

Probab=97.02  E-value=0.0011  Score=43.84  Aligned_cols=126  Identities=18%  Similarity=0.235  Sum_probs=69.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHH-----HCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--C------CH-HHHHHH
Q ss_conf             999878899967899999997-----189489578999999960014566667764134455--4------10-356655
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQK-----LNVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLI--S------DA-IVNQVV   68 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~-----~~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lv--p------d~-ii~~li   68 (201)
T Consensus        27 ~li~G~~GtGKsi~~~~~~~~~l~~g~~~~yis~e~t~~~~i~qm~s~g~di~~~~~~G~l~~i~~~~~~~~~~~~~~~L  106 (230)
T PRK08533         27 ILIEGDESTGKSILSQRLAYGFLQNGYSVSYVSSQLTTTEFIKQMMSLGYDINKKLISGKLLYIPVYPLLSGNSEKRDFL  106 (230)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHH
T ss_conf             99986899878999999999998789869999943899999999998699817997579679996134335404578999


Q ss_pred             HHHHCCC--CCCCEEEECCC-H---H--HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             5420232--22531786380-1---1--12457888766653125222103555422125664233112
Q gi|254780240|r   69 CDRIRLP--DCDSGFILDGY-P---R--TVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVL  129 (201)
Q Consensus        69 ~~~l~~~--~~~~g~ilDGF-P---R--t~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~  129 (201)
T Consensus       107 ~~ll~~~~~~~~dvIIIDSlS~l~~~~~~~~~~~~~~~~lk~l-~s~gktIilTv~p~~~~e~~l~~lr  174 (230)
T PRK08533        107 DKLMNTRRFYEKDVVIIDSLSSLVSRDASEVQIRDLMAFFKRI-SSLNKVIILTANPKELPESVLLILR  174 (230)
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCHHHHHHHH
T ss_conf             9997326643798999905318851677789999999999999-8589889999563313624544204