HHsearch alignment for GI: 254780240 and conserved domain: PRK08853

Probab=96.88  E-value=0.0056  Score=39.38  Aligned_cols=118  Identities=16%  Similarity=0.227  Sum_probs=55.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCE-E---CHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-C
Q ss_conf             99987889996789999999718948-9---578999-9999600145666677641344554103566555420232-2
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQ-L---STGDML-RAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLP-D   76 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~-i---s~gdll-R~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~~-~   76 (201)
T Consensus        41 ylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~d--~~E-iDaAs~~~vdd~rel~~~~~y~p~~  117 (717)
T PRK08853         41 YLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFVD--LLE-IDAASRTKVEDTRELLDNVQYKPAR  117 (717)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC--EEE-ECCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             7610889888989999999986789999999788870267674478775--245-4056567889999999855548877


Q ss_pred             C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH------HHHHHHHHH
Q ss_conf             2-531786380111245788876665312522210355542------212566423
Q gi|254780240|r   77 C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVE------DASMFKRIQ  125 (201)
Q Consensus        77 ~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~------~~~~~~R~~  125 (201)
T Consensus       118 ~~yKvyiiDEvH--mls~~afnAlLKtlEEPP~hv~FilaTT~~~kip~TilSRc~  171 (717)
T PRK08853        118 GRFKVYLIDEVH--MLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCL  171 (717)
T ss_pred             CCEEEEEEECHH--HCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCHHHHHHHH
T ss_conf             854799983054--438999999987603787564899843873437388987654