HHsearch alignment for GI: 254780240 and conserved domain: PRK09111

Probab=95.88  E-value=0.0075  Score=38.60  Aligned_cols=115  Identities=14%  Similarity=0.200  Sum_probs=55.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEE--------C-HHHH-HHHHHHHHHHHH-HHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             999878899967899999997189489--------5-7899-999996001456-6667764134455410356655542
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQL--------S-TGDM-LRAEVDRNTLLG-KQVKGSMESGSLISDAIVNQVVCDR   71 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~i--------s-~gdl-lR~~~~~~s~~g-~~i~~~l~~G~lvpd~ii~~li~~~   71 (201)
T Consensus        48 ~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~daas~~----~v~~~r~~~-~~  122 (600)
T PRK09111         48 FMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEHCQAIMEGRHVDVIEMDAASHT----GVDDIREII-ES  122 (600)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC----CHHHHHHHH-HH
T ss_conf             7645789878999999999996698876668998898998865898866899875885155457----888999999-86


Q ss_pred             HCCCC--C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH------HHHHHH
Q ss_conf             02322--2-53178638011124578887666531252221035554221------256642
Q gi|254780240|r   72 IRLPD--C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDA------SMFKRI  124 (201)
Q Consensus        72 l~~~~--~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~------~~~~R~  124 (201)
T Consensus       123 ~~~~p~~~~~kv~iidevh--mls~~afnallktleepp~~~~fi~att~~~k~p~ti~src  182 (600)
T PRK09111        123 VRYRPVSARYKVYIIDEVH--MLSTAAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRC  182 (600)
T ss_pred             HCCCCCCCCEEEEEEECCC--CCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf             0538877754699960011--05799999999876259865499996285343758998544