HHsearch alignment for GI: 254780240 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=97.70  E-value=0.00022  Score=48.16  Aligned_cols=36  Identities=33%  Similarity=0.546  Sum_probs=29.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHH-----HCCCEECHHHHHHH
Q ss_conf             6999878899967899999997-----18948957899999
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQK-----LNVPQLSTGDMLRA   37 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~-----~~~~~is~gdllR~   37 (201)
T Consensus       103 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~  143 (258)
T PRK09183        103 NIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQ  143 (258)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
T ss_conf             67998999986899999999999987993999789999999