HHsearch alignment for GI: 254780240 and conserved domain: PRK12323

Probab=96.40  E-value=0.014  Score=36.95  Aligned_cols=106  Identities=18%  Similarity=0.268  Sum_probs=57.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEC---------HHHHH-HHHHHHHHHHHHHHHHHHHCCCCCC-----------C
Q ss_conf             9998788999678999999971894895---------78999-9999600145666677641344554-----------1
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQLS---------TGDML-RAEVDRNTLLGKQVKGSMESGSLIS-----------D   61 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~is---------~gdll-R~~~~~~s~~g~~i~~~l~~G~lvp-----------d   61 (201)
T Consensus        41 ylf~G~rGvGKTt~ari~Ak~lnc~~~~~~~g~~~~pcg~C~~C~~i~--------------~g~~~d~~EiDaas~~~v  106 (721)
T PRK12323         41 YLFTGTRGVGKTTLSRILAKSLNCTGPDGEGGITAQPCGQCRACTEID--------------AGRFVDYIEMDAASNRGV  106 (721)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH--------------CCCCCCEEEEECCCCCCH
T ss_conf             750279988898999999999768998667898788787765468775--------------689876477436767888


Q ss_pred             HHHHHHHHHHHCCCC--C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH------HHHHHHHHH
Q ss_conf             035665554202322--2-531786380111245788876665312522210355542------212566423
Q gi|254780240|r   62 AIVNQVVCDRIRLPD--C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVE------DASMFKRIQ  125 (201)
Q Consensus        62 ~ii~~li~~~l~~~~--~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~------~~~~~~R~~  125 (201)
T Consensus       107 ~~~r~l~-~~~~y~P~~~~~KvyiiDev--hmls~~afnalLKtlEePP~hv~FilaTT~~~Kip~TilSRc~  176 (721)
T PRK12323        107 DEMAQLL-DQAVYAPTAGRFKVYMIDEV--HMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCL  176 (721)
T ss_pred             HHHHHHH-HHCCCCCCCCCEEEEEEECC--CCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCHHHHHHHH
T ss_conf             9999999-85455887664469998540--0058999999998401797553899943863448588987765