HHsearch alignment for GI: 254780240 and conserved domain: PRK13342

>PRK13342 recombination factor protein RarA; Reviewed.

Probab=97.64  E-value=6.3e-05  Score=51.62  Aligned_cols=29  Identities=31%  Similarity=0.502  Sum_probs=24.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEC
Q ss_conf             69998788999678999999971894895
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKLNVPQLS   30 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~~~~~is   30 (201)
T Consensus        39 s~Il~GPPG~GKTTlA~iiA~~~~~~f~~   67 (417)
T PRK13342         39 SMILWGPPGTGKTTLARIIAGATDAEFEA   67 (417)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             59988969998999999999986898899