HHsearch alignment for GI: 254780240 and conserved domain: PRK13975
>PRK13975 thymidylate kinase; Provisional.
Probab=99.41 E-value=8.8e-12 Score=94.58 Aligned_cols=174 Identities=25% Similarity=0.285 Sum_probs=94.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH------HCCCC
Q ss_conf 999878899967899999997189489578999999960014566667764134455410356655542------02322
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDR------IRLPD 76 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~------l~~~~ 76 (201)
T Consensus 5 I~fEGiDGsGKsTq~~lL~~~L~~~~t------~e--pg~t~~ge~IR~~l~~~~~~~~~~~LLfaA~R~~~~~~i~~~l 76 (198)
T PRK13975 5 IVFEGIDGSGKTTQAKLLAEKLNAKFT------FE--PTDGKIGKSIREILSGSECQKETLALLFAADRVEHVSEIEEDL 76 (198)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEE------EC--CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999899888699999999997387488------89--7998447999999826899859999999999999999999998
Q ss_pred CCCEEEECCCHH-HHH-HH-----HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 253178638011-124-57-----88876665312522210355542212566423311232333455656789899999
Q gi|254780240|r 77 CDSGFILDGYPR-TVD-QA-----KSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLK 149 (201)
Q Consensus 77 ~~~g~ilDGFPR-t~~-Qa-----~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~ 149 (201)
T Consensus 77 ~~~~VI~DRy~~St~AYQ~~~g~~~~~i~~l~~~~~~PDlt~~LDi~~e~~l~R~~~r~~~~--------~-e~~~-f~~ 146 (198)
T PRK13975 77 KKSHVVSDRYVYSSIVYQSSQGIDKDFIYSINDYAKIPDLVVLLDVDLEEALKRMESREKEI--------F-EKIE-IQK 146 (198)
T ss_pred HCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCHH--------H-HHHH-HHH
T ss_conf 68988972761239998561399999999999679999989997398999999876357315--------5-4299-999
Q ss_pred HH-HHHHHHHHHHHHHHHHCCCEEEECC-CCCHHHHHHHHHHHHHHH
Q ss_conf 99-9999975699999996797999938-998899999999999999
Q gi|254780240|r 150 RI-ENYRKTILPLSSYYRDMGCLYIIDG-MLDMDEVSRSIDSLLVSV 194 (201)
Q Consensus 150 Rl-~~y~~~~~pv~~~y~~~~~l~~Idg-~~~~~eV~~~I~~~l~~~ 194 (201)
T Consensus 147 kVr~~yl~la~~~~~r~~~~~~~i~Id~~~ksieeV~~~I~~~i~~~ 193 (198)
T PRK13975 147 KIKEGYYNLINSENEKFMPKYGFIVIDTTSKSIEEVFNEILNAILDK 193 (198)
T ss_pred HHHHHHHHHHHHCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999997482310012571899899999999999999999986