HHsearch alignment for GI: 254780240 and conserved domain: PRK13976

>PRK13976 thymidylate kinase; Provisional.
Probab=99.27  E-value=3.4e-10  Score=84.66  Aligned_cols=166  Identities=19%  Similarity=0.209  Sum_probs=91.3

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHC----C-CEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCHH-----------
Q ss_conf             9699987889996789999999718----9-489578999999960014566667764134455-4103-----------
Q gi|254780240|r    1 MRIIFLGPPGSGKGTQACRLSQKLN----V-PQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLI-SDAI-----------   63 (201)
Q Consensus         1 m~I~i~G~PGsGK~T~a~~la~~~~----~-~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lv-pd~i-----------   63 (201)
T Consensus         1 mfIvfEGiDGsGKsTq~~~L~~~L~~~~~~~~~~~----trE--Pggt~~ge~IR~~ll~~~~~~~~te~lLf~A~R~eh   74 (202)
T PRK13976          1 MFITFEGIDGSGKTTQSRLLAEYLSQIYGENNVVL----TRE--PGGTSFNESVRGLLLSTKNLDKLSELLLFIAMRREH   74 (202)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE----ECC--CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf             98999899999899999999999986069986898----379--999827899999971655799699999999999999


Q ss_pred             HHHHHHHHHCCCCCCCEEEEC----------CCHHHHH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             566555420232225317863----------8011124--5788876665312522210355542212566423311232
Q gi|254780240|r   64 VNQVVCDRIRLPDCDSGFILD----------GYPRTVD--QAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEA  131 (201)
Q Consensus        64 i~~li~~~l~~~~~~~g~ilD----------GFPRt~~--Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~  131 (201)
T Consensus        75 ~~~~I~PaL~~---g~~VI~DRy~~St~AYQg~~~gl~~~~i~~l~~~~~--~~~PDlt~~Ldi~~e~al~R~~~~~~e-  148 (202)
T PRK13976         75 FVKVILPALTQ---GKIVICDRFIDSTIAYQGYGCGIDLKLIRDLNDLVV--DIYPDITFILDIDINQSLSRADKNGYE-  148 (202)
T ss_pred             HHHHHHHHHHC---CCEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHC--CCCCCEEEEEECCHHHHHHCCCCCCHH-
T ss_conf             99998888866---998997485355788732267989999999999840--789887999837889997521468621-


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHC-CCEE---EECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             333455656789899999999999975-6999999967-9799---99389988999999999999999
Q gi|254780240|r  132 IASEKSVRSDDKYDVFLKRIENYRKTI-LPLSSYYRDM-GCLY---IIDGMLDMDEVSRSIDSLLVSVR  195 (201)
Q Consensus       132 ~~~~~~~R~DD~~e~i~~Rl~~y~~~~-~pv~~~y~~~-~~l~---~Idg~~~~~eV~~~I~~~l~~~~  195 (201)
T Consensus       149 ----------~~~------~~-f~~kVr~~Yl~la~~~~~r~~~I~~ida~~~i~~I~~~~~~ii~~~~  200 (202)
T PRK13976        149 ----------FMD------LE-FYARVRKGFQDIAKKNPHRCHLITCIDATDNINDINSVHLKIIKVLQ  200 (202)
T ss_pred             ----------HCC------HH-HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             ----------205------99-99999999999998599878999703576798999999999999986