HHsearch alignment for GI: 254780240 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.

Probab=94.98  E-value=0.016  Score=36.52  Aligned_cols=64  Identities=20%  Similarity=0.338  Sum_probs=38.9

Q ss_pred             EECCCCCCHHHHHHHHHHHHCCC---EECHHHHHHHHHHHHHHHHHHHHHH------HHCCCCCCCHHHHHHHH---HHH
Q ss_conf             98788999678999999971894---8957899999996001456666776------41344554103566555---420
Q gi|254780240|r    5 FLGPPGSGKGTQACRLSQKLNVP---QLSTGDMLRAEVDRNTLLGKQVKGS------MESGSLISDAIVNQVVC---DRI   72 (201)
Q Consensus         5 i~G~PGsGK~T~a~~la~~~~~~---~is~gdllR~~~~~~s~~g~~i~~~------l~~G~lvpd~ii~~li~---~~l   72 (201)
T Consensus        39 fmsspGSGKT~LiEk~~~~~~~~~K~Avi~GD~~t~------~DA~RlR~~G~~a~~~nTGk--~CHLdA~mv~G~~~~L  110 (225)
T TIGR00073        39 FMSSPGSGKTTLIEKLIERLDDEVKIAVIEGDVQTK------NDADRLRKYGVPAIQINTGK--ECHLDAHMVAGAIHAL  110 (225)
T ss_pred             ECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHH------HHHHHHHHCCCEEEEECCCC--CCCCHHHHHHHHHHHH
T ss_conf             025886115899999999845789789997553225------56999986498688636886--4440166786587554


Q ss_pred             CCCC
Q ss_conf             2322
Q gi|254780240|r   73 RLPD   76 (201)
Q Consensus        73 ~~~~   76 (201)
T Consensus       111 ~~~~  114 (225)
T TIGR00073       111 KDLP  114 (225)
T ss_pred             HCCC
T ss_conf             2168