HHsearch alignment for GI: 254780240 and conserved domain: TIGR02173

>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=99.54  E-value=3.7e-14  Score=109.52  Aligned_cols=165  Identities=25%  Similarity=0.286  Sum_probs=101.3

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-CCCC
Q ss_conf             969998788999678999999971894895789999999-60014566667764134455410356655542023-2225
Q gi|254780240|r    1 MRIIFLGPPGSGKGTQACRLSQKLNVPQLSTGDMLRAEV-DRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRL-PDCD   78 (201)
Q Consensus         1 m~I~i~G~PGsGK~T~a~~la~~~~~~~is~gdllR~~~-~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~-~~~~   78 (201)
T Consensus         1 M~I~ISGpPGSGktTvA~~lA~~Lsl~~iSaG~i-RelA~~~Gl----dl~E~~~ae---e~~eIDk~iD~~~~E~A~~~   72 (173)
T TIGR02173         1 MIITISGPPGSGKTTVAKILAEKLSLKLISAGDI-RELAEKMGL----DLAESKYAE---ENPEIDKKIDRRIREIAEKE   72 (173)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCEECCCHH-HHHHHHCCC----CHHHHHHHC---CCCCCCHHHHHHHHHHHCCC
T ss_conf             9788735896864789999998639831202007-889864298----877734430---58631167537885543048


Q ss_pred             CEEEECCCHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCHHHHHHHHHHH
Q ss_conf             317863801112457888766653-12522210355542212566423311232333---45565678989999999999
Q gi|254780240|r   79 SGFILDGYPRTVDQAKSLHAFISN-MDCAIDAVIELRVEDASMFKRIQVRVLEAIAS---EKSVRSDDKYDVFLKRIENY  154 (201)
Q Consensus        79 ~g~ilDGFPRt~~Qa~~l~~~l~~-~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~---~~~~R~DD~~e~i~~Rl~~y  154 (201)
T Consensus        73 ~nvvlEs---------rlagW~~~~nG~yaD~~iyL~A~levRA~RIA~Re~k~~~~A~~~~~~----REe~e~rRy~~i  139 (173)
T TIGR02173        73 KNVVLES---------RLAGWILKKNGEYADVKIYLKAPLEVRARRIAKRENKDLTVALKEIIE----REESEKRRYKEI  139 (173)
T ss_pred             CCEEEEE---------HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH----HHHHHHHHHHHH
T ss_conf             9668852---------054331157889675678860883332433211368898999999999----887622345665


Q ss_pred             HHHHHHHHHHHHHCCC-EEEECCCC-CHHHHHHHHHHHHH
Q ss_conf             9975699999996797-99993899-88999999999999
Q gi|254780240|r  155 RKTILPLSSYYRDMGC-LYIIDGML-DMDEVSRSIDSLLV  192 (201)
Q Consensus       155 ~~~~~pv~~~y~~~~~-l~~Idg~~-~~~eV~~~I~~~l~  192 (201)
T Consensus       140 Yg-----IDi-dDlsiYDLvinT~~~~~~~v~~iv~~ald  173 (173)
T TIGR02173       140 YG-----IDI-DDLSIYDLVINTSNLDVDEVSDIVLDALD  173 (173)
T ss_pred             CC-----CCC-CCCEEEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf             25-----023-43222200334476681269999998609