HHsearch alignment for GI: 254780240 and conserved domain: TIGR02525
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364 Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii..
Probab=94.91 E-value=0.02 Score=35.91 Aligned_cols=47 Identities=28% Similarity=0.400 Sum_probs=35.7
Q ss_pred EEECCCCCCHHHHHHHHHHHHCCCE-----E-----------CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987889996789999999718948-----9-----------57899999996001456666776
Q gi|254780240|r 4 IFLGPPGSGKGTQACRLSQKLNVPQ-----L-----------STGDMLRAEVDRNTLLGKQVKGS 52 (201)
Q Consensus 4 ~i~G~PGsGK~T~a~~la~~~~~~~-----i-----------s~gdllR~~~~~~s~~g~~i~~~ 52 (201)
T Consensus 153 LiCG~TGSGKSTl~AaiY~~~l~t~pdRKivT~EDPvEY~L~~~~~~l~a--p~Q~~IGRDv~sF 215 (374)
T TIGR02525 153 LICGETGSGKSTLAAAIYRHCLETYPDRKIVTYEDPVEYILGSPDDLLPA--PAQSEIGRDVESF 215 (374)
T ss_pred EECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCHHCC--CCCHHCCCCHHHH
T ss_conf 22177897289999999998507488970798657721231885201027--6301106876788