HHsearch alignment for GI: 254780240 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=94.49 E-value=0.018 Score=36.26 Aligned_cols=15 Identities=53% Similarity=0.860 Sum_probs=12.0
Q ss_pred EEEECCCCCCHHHHH
Q ss_conf 999878899967899
Q gi|254780240|r 3 IIFLGPPGSGKGTQA 17 (201)
Q Consensus 3 I~i~G~PGsGK~T~a 17 (201)
T Consensus 248 iLVTGPTGSGKtTTL 262 (495)
T TIGR02533 248 ILVTGPTGSGKTTTL 262 (495)
T ss_pred EEECCCCCCCHHHHH
T ss_conf 884177898525889