HHsearch alignment for GI: 254780240 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=97.15 E-value=0.00016 Score=49.04 Aligned_cols=87 Identities=24% Similarity=0.470 Sum_probs=53.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCE--------ECHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HH
Q ss_conf 99987889996789999999718948--------957899999996--00145666677641344554103566555-42
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQ--------LSTGDMLRAEVD--RNTLLGKQVKGSMESGSLISDAIVNQVVC-DR 71 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~--------is~gdllR~~~~--~~s~~g~~i~~~l~~G~lvpd~ii~~li~-~~ 71 (201)
T Consensus 24 vHl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd~eL~~~DLvG~~~g~~~~kv~DqfihnV~K~-----~d~~~~~W~D~r 98 (265)
T TIGR02640 24 VHLRGPAGTGKTTLAMHVARKRDRPVVLINGDAELTTSDLVGSYAGYTRKKVVDQFIHNVVKL-----EDIVRQNWVDNR 98 (265)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEECC-----CCCCCCCCCCCH
T ss_conf 674478885568999999973689689986582326544231546752222320121113425-----122002667835
Q ss_pred HCCCCCCCEE--EECCCHHHHHHHHH
Q ss_conf 0232225317--86380111245788
Q gi|254780240|r 72 IRLPDCDSGF--ILDGYPRTVDQAKS 95 (201)
Q Consensus 72 l~~~~~~~g~--ilDGFPRt~~Qa~~ 95 (201)
T Consensus 99 Lt-~Av~eG~TLVYdEF~RskP~~nN 123 (265)
T TIGR02640 99 LT-LAVREGFTLVYDEFTRSKPETNN 123 (265)
T ss_pred HH-HHHHCCCEEEECCCCCCCCHHHH
T ss_conf 78-99756972766475788620456