HHsearch alignment for GI: 254780240 and conserved domain: TIGR02788

>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=96.36  E-value=0.0028  Score=41.31  Aligned_cols=23  Identities=39%  Similarity=0.488  Sum_probs=20.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             69998788999678999999971
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKL   24 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~   24 (201)
T Consensus       160 nIii~GGTgSGKTTf~kal~~~I  182 (328)
T TIGR02788       160 NIIISGGTGSGKTTFLKALVKEI  182 (328)
T ss_pred             EEEEEECCCCHHHHHHHHHHHCC
T ss_conf             19999068971899999997327