HHsearch alignment for GI: 254780240 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=97.27 E-value=0.00023 Score=48.04 Aligned_cols=116 Identities=22% Similarity=0.314 Sum_probs=69.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH-CCCEECHHHHHHHHHHH--H---HHHHHHHHHHHHC--CC-CCCCH----------
Q ss_conf 69998788999678999999971-89489578999999960--0---1456666776413--44-55410----------
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKL-NVPQLSTGDMLRAEVDR--N---TLLGKQVKGSMES--GS-LISDA---------- 62 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~-~~~~is~gdllR~~~~~--~---s~~g~~i~~~l~~--G~-lvpd~---------- 62 (201)
T Consensus 44 HMiFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ERADLVGEYIGHTAqkTRe~~kkA~GGvLFiDEAYSLaRGGEK 123 (261)
T TIGR02881 44 HMIFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVERADLVGEYIGHTAQKTREVIKKALGGVLFIDEAYSLARGGEK 123 (261)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 87742786684389999999998533756788678876222122320300489999999863880055777776148888
Q ss_pred ----HHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf ----356655542023222531786380111245788876665312522210355542212566
Q gi|254780240|r 63 ----IVNQVVCDRIRLPDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFK 122 (201)
Q Consensus 63 ----ii~~li~~~l~~~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~ 122 (201)
T Consensus 124 DFGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~y---F--L~~NPGL~SRFPi~i~FPdY~~ee 182 (261)
T TIGR02881 124 DFGKEAIDTLVKAMEDQRNELVLILAGYSDEMDY---F--LSLNPGLRSRFPISIDFPDYTVEE 182 (261)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHH---H--HHCCCCCCCCCCCEEECCCCCHHH
T ss_conf 7662088899998761569868997087689999---8--620779777665054188998889