HHsearch alignment for GI: 254780240 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=94.11 E-value=0.058 Score=33.02 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=23.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH------------CCCEECHHHHH
Q ss_conf 69998788999678999999971------------89489578999
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKL------------NVPQLSTGDML 35 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~------------~~~~is~gdll 35 (201)
T Consensus 210 NPiLVGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~sLDlg~Lv 255 (852)
T TIGR03345 210 NPILTGEAGVGKTAVVEGLALRIAAGDVPPALRNVRLLSLDLGLLQ 255 (852)
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEHHHHH
T ss_conf 9746579998799999999999976999867743856786788886